Start: 2026-09-16 03:16:21 GMT [testing] Package: bitshuffle Version: 0.5.2-3 Installed-Size: 684 Maintainer: Debian PaN Maintainers Architecture: amd64 Provides: hdf5-filter-plugin-bshuf-mpi, hdf5-filter-plugin-bshuf-openmpi, hdf5-filter-plugin-bshuf-serial Depends: python3 (<< 3.15), python3 (>= 3.14~), python3-h5py (>= 2.4.0), python3-numpy, python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.34), libgomp1 (>= 6), libhdf5-320 (>= 2.1.0), libhdf5-openmpi-320 (>= 1.10.0), liblz4-1 (>= 0.0~r130), liblzf1 (>= 1.5), libzstd1 (>= 1.5.5) Description: filter for improving compression of typed binary data Homepage: https://github.com/kiyo-masui/bitshuffle Description-md5: cd2f1aef4b1fdac0de3b63a646625903 Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/b/bitshuffle/bitshuffle_0.5.2-3_amd64.deb Size: 144064 MD5sum: 33b72a02f4dd553cfc3db37d4c80a95f SHA256: 1741b114164940813452c8da112bb0baf0e4f574386e4d3f89755972bd442ded [sid] Package: bitshuffle Version: 0.5.2-3 Installed-Size: 684 Maintainer: Debian PaN Maintainers Architecture: amd64 Provides: hdf5-filter-plugin-bshuf-mpi, hdf5-filter-plugin-bshuf-openmpi, hdf5-filter-plugin-bshuf-serial Depends: python3 (<< 3.15), python3 (>= 3.14~), python3-h5py (>= 2.4.0), python3-numpy, python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.34), libgomp1 (>= 6), libhdf5-320 (>= 2.1.0), libhdf5-openmpi-320 (>= 1.10.0), liblz4-1 (>= 0.0~r130), liblzf1 (>= 1.5), libzstd1 (>= 1.5.5) Description: filter for improving compression of typed binary data Homepage: https://github.com/kiyo-masui/bitshuffle Description-md5: cd2f1aef4b1fdac0de3b63a646625903 Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/b/bitshuffle/bitshuffle_0.5.2-3_amd64.deb Size: 144064 MD5sum: 33b72a02f4dd553cfc3db37d4c80a95f SHA256: 1741b114164940813452c8da112bb0baf0e4f574386e4d3f89755972bd442ded Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt bitshuffle=0.5.2-3 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202608291513~1.6.0-23-g1172a6e5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt bitshuffle=0.5.2-3 0m0.0s INFO: Running on: Linux piu-slave-conova-01 6.12.107+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.107-1 (2026-08-29) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpvgbajek7 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpvgbajek7 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/proc'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/proc'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/9', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/9', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ forky main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpvgbajek7/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', 'update'] 0m2.9s DUMP: Get:1 http://deb.debian.org/debian forky InRelease [151 kB] Get:2 http://deb.debian.org/debian forky/main amd64 Packages [9981 kB] Get:3 http://deb.debian.org/debian forky/main Translation-en [6606 kB] Fetched 16.7 MB in 1s (12.1 MB/s) Reading package lists... 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', 'update'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-yf', 'dist-upgrade'] 0m5.2s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: bash libc-bin libc-gconv-modules-extra libc6 libssl3t64 openssl-provider-legacy 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 8107 kB of archives. After this operation, 278 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian forky/main amd64 bash amd64 5.3-4 [1582 kB] Get:2 http://deb.debian.org/debian forky/main amd64 libc-gconv-modules-extra amd64 2.43-5 [1100 kB] Get:3 http://deb.debian.org/debian forky/main amd64 libc6 amd64 2.43-5 [1865 kB] Get:4 http://deb.debian.org/debian forky/main amd64 libc-bin amd64 2.43-5 [621 kB] Get:5 http://deb.debian.org/debian forky/main amd64 openssl-provider-legacy amd64 3.6.4-1 [326 kB] Get:6 http://deb.debian.org/debian forky/main amd64 libssl3t64 amd64 3.6.4-1 [2614 kB] Preconfiguring packages ... Fetched 8107 kB in 0s (74.6 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4976 files and directories currently installed.) Preparing to unpack .../archives/bash_5.3-4_amd64.deb ... Unpacking bash (5.3-4) over (5.3-3+b1) ... Setting up bash (5.3-4) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4975 files and directories currently installed.) Preparing to unpack .../libc-gconv-modules-extra_2.43-5_amd64.deb ... Unpacking libc-gconv-modules-extra:amd64 (2.43-5) over (2.43-4) ... Setting up libc-gconv-modules-extra:amd64 (2.43-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4975 files and directories currently installed.) Preparing to unpack .../libc6_2.43-5_amd64.deb ... Unpacking libc6:amd64 (2.43-5) over (2.43-4) ... Setting up libc6:amd64 (2.43-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4975 files and directories currently installed.) Preparing to unpack .../libc-bin_2.43-5_amd64.deb ... Unpacking libc-bin (2.43-5) over (2.43-4) ... Setting up libc-bin (2.43-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4975 files and directories currently installed.) Preparing to unpack .../openssl-provider-legacy_3.6.4-1_amd64.deb ... Unpacking openssl-provider-legacy (3.6.4-1) over (3.6.3-1) ... Setting up openssl-provider-legacy (3.6.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4975 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.6.4-1_amd64.deb ... Unpacking libssl3t64:amd64 (3.6.4-1) over (3.6.3-1) ... Setting up libssl3t64:amd64 (3.6.4-1) ... Processing triggers for debianutils (5.24) ... Processing triggers for libc-bin (2.43-5) ... 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-yf', 'dist-upgrade'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.6s DUMP: 7d78e9d84a3c9406d930c011ed5ffe15 - 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.6s INFO: Running scripts post_setup 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_dummy_users'] 0m6.1s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_dummy_users'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_forbid_home'] 0m6.2s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_forbid_home'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.2s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_minimize'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_minimize'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_zz_backports'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_setup_zz_backports'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.2s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed bsdutils bsdutils 1:2.42.2-4 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.7 install ok installed findutils findutils 4.11.0-2 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-1 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu1 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b2 install ok installed libblkid1:amd64 libblkid1 2.42.2-4 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-5 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-5 install ok installed libc6:amd64 libc6 2.43-5 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.5-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.3-1 install ok installed libmd0:amd64 libmd0 1.2.0-2 install ok installed libmount1:amd64 libmount1 2.42.2-4 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-2 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b1 install ok installed libselinux1:amd64 libselinux1 3.11-2 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b1 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.2-4 install ok installed libssl3t64:amd64 libssl3t64 3.6.4-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-1 install ok installed libsystemd0:amd64 libsystemd0 261.2-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 261.2-1 install ok installed libuuid1:amd64 libuuid1 2.42.2-4 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.2-4 install ok installed login.defs login.defs 1:4.19.3-2 install ok installed mawk mawk 1.3.4.20260302-1 install ok installed mount mount 2.42.2-4 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.4-1 install ok installed passwd passwd 1:4.19.3-2 install ok installed perl-base perl-base 5.42.3-1 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-5 install ok installed tzdata tzdata 2026c-1 install ok installed util-linux util-linux 2.42.2-4 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.2s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m6.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m6.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m6.5s INFO: Running scripts is_testable 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/is_testable_uninstallable'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/is_testable_uninstallable'] 0m6.5s INFO: Running scripts pre_test 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_test_exceptions'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_test_exceptions'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_test_root_password'] 0m6.6s DUMP: New password: Retype new password: passwd: password updated successfully 0m6.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_test_root_password'] 0m6.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'show', '--no-all-versions', 'bitshuffle'] 0m6.8s DUMP: Package: bitshuffle Version: 0.5.2-3 Installed-Size: 684 Maintainer: Debian PaN Maintainers Architecture: amd64 Provides: hdf5-filter-plugin-bshuf-mpi, hdf5-filter-plugin-bshuf-openmpi, hdf5-filter-plugin-bshuf-serial Depends: python3 (<< 3.15), python3 (>= 3.14~), python3-h5py (>= 2.4.0), python3-numpy, python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.34), libgomp1 (>= 6), libhdf5-320 (>= 2.1.0), libhdf5-openmpi-320 (>= 1.10.0), liblz4-1 (>= 0.0~r130), liblzf1 (>= 1.5), libzstd1 (>= 1.5.5) Description-en: filter for improving compression of typed binary data Bitshuffle is an algorithm that rearranges typed, binary data for improving compression, as well as a python/C package that implements this algorithm within the Numpy framework. . The library can be used along side HDF5 to compress and decompress datasets and is integrated through the dynamically loaded filters framework. Bitshuffle is HDF5 filter number 32008. . Algorithmically, Bitshuffle is closely related to HDF5's Shuffle filter except it operates at the bit level instead of the byte level. Arranging a typed data array in to a matrix with the elements as the rows and the bits within the elements as the columns, Bitshuffle "transposes" the matrix, such that all the least-significant-bits are in a row, etc. This transpose is performed within blocks of data roughly 8kB long. . This does not in itself compress data, only rearranges it for more efficient compression. To perform the actual compression you will need a compression library. Bitshuffle has been designed to be well matched Marc Lehmann's LZF as well as LZ4. Note that because Bitshuffle modifies the data at the bit level, sophisticated entropy reducing compression libraries such as GZIP and BZIP are unlikely to achieve significantly better compression than simpler and faster duplicate-string-elimination algorithms such as LZF and LZ4. Bitshuffle thus includes routines (and HDF5 filter options) to apply LZ4 compression to each block after shuffling. . The Bitshuffle algorithm relies on neighbouring elements of a dataset being highly correlated to improve data compression. Any correlations that span at least 24 elements of the dataset may be exploited to improve compression. Description-md5: cd2f1aef4b1fdac0de3b63a646625903 Homepage: https://github.com/kiyo-masui/bitshuffle Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/b/bitshuffle/bitshuffle_0.5.2-3_amd64.deb Size: 144064 MD5sum: 33b72a02f4dd553cfc3db37d4c80a95f SHA256: 1741b114164940813452c8da112bb0baf0e4f574386e4d3f89755972bd442ded 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'show', '--no-all-versions', 'bitshuffle'] 0m6.8s INFO: apt-cache knows about the following packages: bitshuffle 0m6.8s INFO: Running scripts pre_install 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_database-server'] 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_database-server'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_exceptions'] 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_exceptions'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_extras'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_extras'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy'] 0m6.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian forky/main amd64 Packages release o=Debian,a=testing,n=forky,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy', 'bitshuffle'] 0m6.9s DUMP: bitshuffle: Installed: (none) Candidate: 0.5.2-3 Version table: 0.5.2-3 500 500 http://deb.debian.org/debian forky/main amd64 Packages 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy', 'bitshuffle'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-y', 'install', 'bitshuffle'] 0m18.3s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: ibverbs-providers libamd-comgr3 libamdhip64-6 libblas3 libclang-common-21-dev libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libevent-core-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1 libfabric1 libffi8 libfuse3-4 libgfortran5 libgomp1 libhdf5-320 libhdf5-hl-320 libhdf5-openmpi-320 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs1 liblapack3 libllvm21 liblzf1 libmunge2 libncursesw6 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi40 libpciaccess0 libpmix2t64 libpsm2-2 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib librdmacm1t64 libreadline8t64 libsqlite3-0 libsystemd-shared libsz2 libucc1 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2-16 libxnvctrl0 libz3-4 libze1 media-types netbase ocl-icd-libopencl1 pci.ids python3 python3-h5py python3-h5py-serial python3-minimal python3-numpy python3-numpy-dev python3.14 python3.14-minimal readline-common systemd Suggested packages: fuse3 libhwloc-contrib-plugins libarchive13t64 libcurl4t64 libdw1t64 libfdisk1 libfido2-1 libgcrypt20 libidn2-0 libmicrohttpd12t64 libp11-kit0 libpwquality1 libqrencode4 libtss2-esys-3.0.2-0t64 libtss2-mu-4.0.1-0t64 libtss2-rc0t64 libtss2-tcti-device0t64 opencl-icd python3-doc python3-tk python3-venv python-h5py-doc gcc gfortran python-numpy-doc python3-dev python3-pytest python3.14-venv python3.14-doc binutils binfmt-support readline-doc systemd-container systemd-homed systemd-imds systemd-userdbd systemd-boot systemd-report systemd-resolved systemd-repart polkitd Recommended packages: libclang-rt-21-dev libgpm2 libapparmor1 libbpf1 libcryptsetup12 libkmod2 ca-certificates default-dbus-system-bus | dbus-system-bus linux-sysctl-defaults systemd-timesyncd | time-daemon systemd-tpm systemd-cryptsetup libgcrypt20 The following NEW packages will be installed: bitshuffle ibverbs-providers libamd-comgr3 libamdhip64-6 libblas3 libclang-common-21-dev libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libevent-core-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1 libfabric1 libffi8 libfuse3-4 libgfortran5 libgomp1 libhdf5-320 libhdf5-hl-320 libhdf5-openmpi-320 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs1 liblapack3 libllvm21 liblzf1 libmunge2 libncursesw6 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi40 libpciaccess0 libpmix2t64 libpsm2-2 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib librdmacm1t64 libreadline8t64 libsqlite3-0 libsystemd-shared libsz2 libucc1 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2-16 libxnvctrl0 libz3-4 libze1 media-types netbase ocl-icd-libopencl1 pci.ids python3 python3-h5py python3-h5py-serial python3-minimal python3-numpy python3-numpy-dev python3.14 python3.14-minimal readline-common systemd 0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded. 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../07-libsqlite3-0_3.53.4-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.53.4-2) ... Selecting previously unselected package libpython3.14-stdlib:amd64. Preparing to unpack .../08-libpython3.14-stdlib_3.14.7-3_amd64.deb ... Unpacking libpython3.14-stdlib:amd64 (3.14.7-3) ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6828 files and directories currently installed.) Preparing to unpack .../00-python3_3.14.7-3_amd64.deb ... Unpacking python3 (3.14.7-3) ... Selecting previously unselected package python3-numpy-dev:amd64. Preparing to unpack .../01-python3-numpy-dev_1%3a2.4.6+ds-4+b1_amd64.deb ... Unpacking python3-numpy-dev:amd64 (1:2.4.6+ds-4+b1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../02-libblas3_3.12.1-8_amd64.deb ... Unpacking libblas3:amd64 (3.12.1-8) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../03-libgfortran5_16.2.0-1_amd64.deb ... Unpacking libgfortran5:amd64 (16.2.0-1) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../04-liblapack3_3.12.1-8_amd64.deb ... Unpacking liblapack3:amd64 (3.12.1-8) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../05-python3-numpy_1%3a2.4.6+ds-4+b1_amd64.deb ... Unpacking python3-numpy (1:2.4.6+ds-4+b1) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../06-libsz2_1.1.7-1_amd64.deb ... Unpacking libsz2:amd64 (1.1.7-1) ... Selecting previously unselected package libhdf5-320:amd64. Preparing to unpack .../07-libhdf5-320_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-320:amd64 (2.2.0+repack-4) ... Selecting previously unselected package libhdf5-hl-320:amd64. Preparing to unpack .../08-libhdf5-hl-320_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-hl-320:amd64 (2.2.0+repack-4) ... Selecting previously unselected package liblzf1:amd64. Preparing to unpack .../09-liblzf1_3.6-4+b4_amd64.deb ... Unpacking liblzf1:amd64 (3.6-4+b4) ... Selecting previously unselected package python3-h5py-serial. Preparing to unpack .../10-python3-h5py-serial_3.16.0-6_amd64.deb ... Unpacking python3-h5py-serial (3.16.0-6) ... Selecting previously unselected package python3-h5py. Preparing to unpack .../11-python3-h5py_3.16.0-6_all.deb ... Unpacking python3-h5py (3.16.0-6) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../12-libgomp1_16.2.0-1_amd64.deb ... Unpacking libgomp1:amd64 (16.2.0-1) ... Selecting previously unselected package libevent-core-2.1-7t64:amd64. Preparing to unpack .../13-libevent-core-2.1-7t64_2.1.13-stable-1_amd64.deb ... Unpacking libevent-core-2.1-7t64:amd64 (2.1.13-stable-1) ... Selecting previously unselected package libevent-pthreads-2.1-7t64:amd64. Preparing to unpack .../14-libevent-pthreads-2.1-7t64_2.1.13-stable-1_amd64.deb ... Unpacking libevent-pthreads-2.1-7t64:amd64 (2.1.13-stable-1) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../15-libnl-3-200_3.12.0-2+b1_amd64.deb ... Unpacking libnl-3-200:amd64 (3.12.0-2+b1) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../16-libnl-route-3-200_3.12.0-2+b1_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.12.0-2+b1) ... Selecting previously unselected package libibverbs1:amd64. Preparing to unpack .../17-libibverbs1_64.0-1_amd64.deb ... Unpacking libibverbs1:amd64 (64.0-1) ... Selecting previously unselected package ibverbs-providers:amd64. Preparing to unpack .../18-ibverbs-providers_64.0-1_amd64.deb ... Unpacking ibverbs-providers:amd64 (64.0-1) ... Selecting previously unselected package libnuma1:amd64. Preparing to unpack .../19-libnuma1_2.0.19-1+b2_amd64.deb ... Unpacking libnuma1:amd64 (2.0.19-1+b2) ... Selecting previously unselected package libpsm2-2. Preparing to unpack .../20-libpsm2-2_11.2.185-2.1_amd64.deb ... Unpacking libpsm2-2 (11.2.185-2.1) ... Selecting previously unselected package librdmacm1t64:amd64. Preparing to unpack .../21-librdmacm1t64_64.0-1_amd64.deb ... Unpacking librdmacm1t64:amd64 (64.0-1) ... Selecting previously unselected package libfabric1:amd64. Preparing to unpack .../22-libfabric1_2.1.0-1.1+b2_amd64.deb ... Unpacking libfabric1:amd64 (2.1.0-1.1+b2) ... Selecting previously unselected package libhwloc15:amd64. Preparing to unpack .../23-libhwloc15_2.14.0-2_amd64.deb ... Unpacking libhwloc15:amd64 (2.14.0-2) ... Selecting previously unselected package libmunge2:amd64. Preparing to unpack .../24-libmunge2_0.5.18-1_amd64.deb ... Unpacking libmunge2:amd64 (0.5.18-1) ... Selecting previously unselected package pci.ids. Preparing to unpack .../25-pci.ids_0.0~2026.07.21-1_all.deb ... Unpacking pci.ids (0.0~2026.07.21-1) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../26-libpciaccess0_0.19-2_amd64.deb ... Unpacking libpciaccess0:amd64 (0.19-2) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../27-libxau6_1%3a1.0.11-1+b2_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.11-1+b2) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../28-libxdmcp6_1%3a1.1.5-2+b1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.5-2+b1) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../29-libxcb1_1.17.0-2+b2_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2+b2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../30-libx11-data_2%3a1.8.13-1_all.deb ... Unpacking libx11-data (2:1.8.13-1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../31-libx11-6_2%3a1.8.13-1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.13-1) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../32-libxml2-16_2.15.4+dfsg-1_amd64.deb ... Unpacking libxml2-16:amd64 (2.15.4+dfsg-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../33-libxext6_2%3a1.3.4-1+b4_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b4) ... Selecting previously unselected package libxnvctrl0:amd64. Preparing to unpack .../34-libxnvctrl0_535.171.04-1+b3_amd64.deb ... Unpacking libxnvctrl0:amd64 (535.171.04-1+b3) ... Selecting previously unselected package libze1:amd64. Preparing to unpack .../35-libze1_1.32.0-1_amd64.deb ... Unpacking libze1:amd64 (1.32.0-1) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../36-ocl-icd-libopencl1_2.3.4-1+b1_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Selecting previously unselected package libhwloc-plugins:amd64. Preparing to unpack .../37-libhwloc-plugins_2.14.0-2_amd64.deb ... Unpacking libhwloc-plugins:amd64 (2.14.0-2) ... Selecting previously unselected package libpmix2t64:amd64. Preparing to unpack .../38-libpmix2t64_6.0.0+really5.0.9-3+b2_amd64.deb ... Unpacking libpmix2t64:amd64 (6.0.0+really5.0.9-3+b2) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../39-libedit2_3.1-20260512-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20260512-1) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../40-libz3-4_4.13.3-1.1_amd64.deb ... Unpacking libz3-4:amd64 (4.13.3-1.1) ... Selecting previously unselected package libllvm21:amd64. Preparing to unpack .../41-libllvm21_1%3a21.1.8-10_amd64.deb ... Unpacking libllvm21:amd64 (1:21.1.8-10) ... Selecting previously unselected package libclang-common-21-dev:amd64. Preparing to unpack .../42-libclang-common-21-dev_1%3a21.1.8-10_amd64.deb ... Unpacking libclang-common-21-dev:amd64 (1:21.1.8-10) ... Selecting previously unselected package libamd-comgr3:amd64. Preparing to unpack .../43-libamd-comgr3_7.0.2+dfsg-3_amd64.deb ... Unpacking libamd-comgr3:amd64 (7.0.2+dfsg-3) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../44-libdrm-common_2.4.134-3_all.deb ... Unpacking libdrm-common (2.4.134-3) ... Selecting previously unselected package libdrm2:amd64. Preparing to unpack .../45-libdrm2_2.4.134-3_amd64.deb ... Unpacking libdrm2:amd64 (2.4.134-3) ... Selecting previously unselected package libdrm-amdgpu1:amd64. Preparing to unpack .../46-libdrm-amdgpu1_2.4.134-3_amd64.deb ... Unpacking libdrm-amdgpu1:amd64 (2.4.134-3) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../47-libelf1t64_0.196-1_amd64.deb ... Unpacking libelf1t64:amd64 (0.196-1) ... Selecting previously unselected package libhsakmt1:amd64. Preparing to unpack .../48-libhsakmt1_6.4.3+dfsg-4_amd64.deb ... Unpacking libhsakmt1:amd64 (6.4.3+dfsg-4) ... Selecting previously unselected package libhsa-runtime64-1:amd64. Preparing to unpack .../49-libhsa-runtime64-1_6.4.3+dfsg-4_amd64.deb ... Unpacking libhsa-runtime64-1:amd64 (6.4.3+dfsg-4) ... Selecting previously unselected package libamdhip64-6:amd64. Preparing to unpack .../50-libamdhip64-6_6.4.3-4+b1_amd64.deb ... Unpacking libamdhip64-6:amd64 (6.4.3-4+b1) ... Selecting previously unselected package libfuse3-4:amd64. Preparing to unpack .../51-libfuse3-4_3.18.2-2_amd64.deb ... Unpacking libfuse3-4:amd64 (3.18.2-2) ... Selecting previously unselected package libibumad3:amd64. Preparing to unpack .../52-libibumad3_64.0-1_amd64.deb ... Unpacking libibumad3:amd64 (64.0-1) ... Selecting previously unselected package libibmad5:amd64. Preparing to unpack .../53-libibmad5_64.0-1_amd64.deb ... Unpacking libibmad5:amd64 (64.0-1) ... Selecting previously unselected package libucx0:amd64. Preparing to unpack .../54-libucx0_1.22.0-1_amd64.deb ... Unpacking libucx0:amd64 (1.22.0-1) ... Selecting previously unselected package libucc1:amd64. Preparing to unpack .../55-libucc1_1.9.0-1_amd64.deb ... Unpacking libucc1:amd64 (1.9.0-1) ... Selecting previously unselected package libopenmpi40:amd64. Preparing to unpack .../56-libopenmpi40_5.0.10-1_amd64.deb ... Unpacking libopenmpi40:amd64 (5.0.10-1) ... Selecting previously unselected package libhdf5-openmpi-320:amd64. Preparing to unpack .../57-libhdf5-openmpi-320_2.2.0+repack-4_amd64.deb ... Unpacking libhdf5-openmpi-320:amd64 (2.2.0+repack-4) ... Selecting previously unselected package bitshuffle. Preparing to unpack .../58-bitshuffle_0.5.2-3_amd64.deb ... Unpacking bitshuffle (0.5.2-3) ... Setting up media-types (14.0.0) ... Setting up libxau6:amd64 (1:1.0.11-1+b2) ... Setting up libxdmcp6:amd64 (1:1.1.5-2+b1) ... Setting up pci.ids (0.0~2026.07.21-1) ... Setting up libxcb1:amd64 (1.17.0-2+b2) ... Setting up libxml2-16:amd64 (2.15.4+dfsg-1) ... Setting up libedit2:amd64 (3.1-20260512-1) ... Setting up libsqlite3-0:amd64 (3.53.4-2) ... Setting up libibumad3:amd64 (64.0-1) ... Setting up systemd (261.2-1) ... Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' → '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' → '/usr/lib/systemd/system/systemd-pstore.service'. Created symlink '/etc/systemd/system/autovt@.service' → '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' → '/usr/lib/systemd/system/getty@.service'. Initializing machine ID from random generator. Creating group 'lpadmin' with GID 999. Creating group 'systemd-journal' with GID 998. Creating group 'systemd-network' with GID 997. Creating user 'systemd-network' (systemd Network Management) with UID 997 and GID 997. [ESC][0;1;31m"/home" already exists and is not a directory.[ESC][0m Setting up libibmad5:amd64 (64.0-1) ... Setting up libgomp1:amd64 (16.2.0-1) ... Setting up libze1:amd64 (1.32.0-1) ... Setting up libelf1t64:amd64 (0.196-1) ... Setting up libz3-4:amd64 (4.13.3-1.1) ... Setting up libblas3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libmunge2:amd64 (0.5.18-1) ... Setting up libx11-data (2:1.8.13-1) ... Setting up liblzf1:amd64 (3.6-4+b4) ... Setting up libhwloc15:amd64 (2.14.0-2) ... Setting up python3-numpy-dev:amd64 (1:2.4.6+ds-4+b1) ... Setting up libncursesw6:amd64 (6.6+20260608-2) ... Setting up libgfortran5:amd64 (16.2.0-1) ... Setting up libffi8:amd64 (3.8.0-2) ... Setting up libnuma1:amd64 (2.0.19-1+b2) ... Setting up ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Setting up libnl-3-200:amd64 (3.12.0-2+b1) ... Setting up libpsm2-2 (11.2.185-2.1) ... Setting up libx11-6:amd64 (2:1.8.13-1) ... Setting up netbase (6.6) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up libclang-common-21-dev:amd64 (1:21.1.8-10) ... Setting up libfuse3-4:amd64 (3.18.2-2) ... Setting up libdrm-common (2.4.134-3) ... Setting up readline-common (8.3-4) ... Setting up libsz2:amd64 (1.1.7-1) ... Setting up libpciaccess0:amd64 (0.19-2) ... Setting up liblapack3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.13-stable-1) ... Setting up libxext6:amd64 (2:1.3.4-1+b4) ... Setting up libnl-route-3-200:amd64 (3.12.0-2+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1+b3) ... Setting up libllvm21:amd64 (1:21.1.8-10) ... Setting up libreadline8t64:amd64 (8.3-4) ... Setting up libdrm2:amd64 (2.4.134-3) ... Setting up libamd-comgr3:amd64 (7.0.2+dfsg-3) ... Setting up libhdf5-320:amd64 (2.2.0+repack-4) ... Setting up libdrm-amdgpu1:amd64 (2.4.134-3) ... Setting up libibverbs1:amd64 (64.0-1) ... Creating group 'rdma' with GID 996. Setting up ibverbs-providers:amd64 (64.0-1) ... Setting up libpython3.14-stdlib:amd64 (3.14.7-3) ... Setting up libhwloc-plugins:amd64 (2.14.0-2) ... Setting up libpmix2t64:amd64 (6.0.0+really5.0.9-3+b2) ... Setting up libhdf5-hl-320:amd64 (2.2.0+repack-4) ... Setting up librdmacm1t64:amd64 (64.0-1) ... Setting up python3.14 (3.14.7-3) ... Setting up libhsakmt1:amd64 (6.4.3+dfsg-4) ... Setting up libpython3-stdlib:amd64 (3.14.7-3) ... Setting up libfabric1:amd64 (2.1.0-1.1+b2) ... Setting up python3 (3.14.7-3) ... Setting up python3-numpy (1:2.4.6+ds-4+b1) ... Setting up libhsa-runtime64-1:amd64 (6.4.3+dfsg-4) ... Setting up python3-h5py-serial (3.16.0-6) ... Setting up libamdhip64-6:amd64 (6.4.3-4+b1) ... Setting up python3-h5py (3.16.0-6) ... Setting up libucx0:amd64 (1.22.0-1) ... Setting up libucc1:amd64 (1.9.0-1) ... Setting up libopenmpi40:amd64 (5.0.10-1) ... Setting up libhdf5-openmpi-320:amd64 (2.2.0+repack-4) ... Setting up bitshuffle (0.5.2-3) ... Processing triggers for libc-bin (2.43-5) ... 0m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-y', 'install', 'bitshuffle'] 0m18.3s INFO: Running scripts post_install 0m18.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_install_exceptions'] 0m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_install_exceptions'] 0m18.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m18.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m18.8s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpvgbajek7 to sid 0m18.8s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m18.8s INFO: Running scripts pre_distupgrade 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_exceptions'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_exceptions'] 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', 'update'] 0m21.6s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [193 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.8 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7729 kB] Fetched 18.7 MB in 2s (9500 kB/s) Reading package lists... 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', 'update'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-yf', 'dist-upgrade'] 0m30.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libhsakmt1 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libesmtp6 The following packages will be upgraded: bsdutils dpkg gcc-16-base ibverbs-providers libamdhip64-6 libblkid1 libcap-ng0 libclang-common-21-dev libfuse3-4 libgcc-s1 libgfortran5 libgomp1 libhdf5-320 libhdf5-hl-320 libhdf5-openmpi-320 libhsa-runtime64-1 libibmad5 libibumad3 libibverbs1 libllvm21 liblzma5 libmount1 libopenmpi40 libpcre2-8-0 libpmix2t64 libpython3.14-minimal libpython3.14-stdlib librdmacm1t64 libsmartcols1 libstdc++6 libsystemd-shared libsystemd0 libudev1 libuuid1 login mount python3.14 python3.14-minimal systemd util-linux 40 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 67.2 MB of archives. After this operation, 371 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 dpkg amd64 1.23.11 [1214 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.42.3-1 [34.4 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.42.3-1 [185 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.42.3-1 [230 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.42.3-1 [152 kB] Get:6 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.42.3-1 [1246 kB] Get:7 http://deb.debian.org/debian sid/main amd64 mount amd64 2.42.3-1 [169 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libsystemd-shared amd64 262~rc3-1 [2790 kB] Get:9 http://deb.debian.org/debian sid/main amd64 systemd amd64 262~rc3-1 [3480 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 262~rc3-1 [512 kB] Get:11 http://deb.debian.org/debian sid/main amd64 login amd64 1:4.16.0-2+really2.42.3-1 [121 kB] Get:12 http://deb.debian.org/debian sid/main amd64 python3.14 amd64 3.14.7-4 [861 kB] Get:13 http://deb.debian.org/debian sid/main amd64 python3.14-minimal amd64 3.14.7-4 [2713 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libpython3.14-stdlib amd64 3.14.7-4 [2362 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libpython3.14-minimal amd64 3.14.7-4 [902 kB] Get:16 http://deb.debian.org/debian sid/main amd64 liblzma5 amd64 5.8.4-1 [354 kB] Get:17 http://deb.debian.org/debian sid/main amd64 gcc-16-base amd64 16.2.0-2 [38.4 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 16.2.0-2 [823 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 16.2.0-2 [151 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 16.2.0-2 [878 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 16.2.0-2 [74.1 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libcap-ng0 amd64 0.9.6-1 [19.0 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libpcre2-8-0 amd64 10.48-3 [312 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 262~rc3-1 [148 kB] Get:25 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.42.3-1 [92.8 kB] Get:26 http://deb.debian.org/debian sid/main amd64 ibverbs-providers amd64 65.0-1 [424 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libibverbs1 amd64 65.0-1 [67.9 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libhsa-runtime64-1 amd64 6.4.3+dfsg-5 [678 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libamdhip64-6 amd64 6.4.3-5 [9385 kB] Get:30 http://deb.debian.org/debian sid/main amd64 libclang-common-21-dev amd64 1:21.1.8-12 [769 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libesmtp6 amd64 1.1.0-3.2+b2 [59.3 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libfuse3-4 amd64 3.18.3-1 [109 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libhdf5-320 amd64 2.2.0+repack-5 [2177 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libhdf5-hl-320 amd64 2.2.0+repack-5 [82.0 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libpmix2t64 amd64 6.1.1~rc2-5 [759 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libopenmpi40 amd64 5.0.10-6 [2103 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libhdf5-openmpi-320 amd64 2.2.0+repack-5 [2273 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libibumad3 amd64 65.0-1 [29.6 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libibmad5 amd64 65.0-1 [44.2 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libllvm21 amd64 1:21.1.8-12 [28.3 MB] Get:41 http://deb.debian.org/debian sid/main amd64 librdmacm1t64 amd64 65.0-1 [79.0 kB] Fetched 67.2 MB in 0s (179 MB/s) (Reading database ... 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Preparing to unpack .../03-libhsa-runtime64-1_6.4.3+dfsg-5_amd64.deb ... Unpacking libhsa-runtime64-1:amd64 (6.4.3+dfsg-5) over (6.4.3+dfsg-4) ... Preparing to unpack .../04-libamdhip64-6_6.4.3-5_amd64.deb ... Unpacking libamdhip64-6:amd64 (6.4.3-5) over (6.4.3-4+b1) ... Preparing to unpack .../05-libclang-common-21-dev_1%3a21.1.8-12_amd64.deb ... Unpacking libclang-common-21-dev:amd64 (1:21.1.8-12) over (1:21.1.8-10) ... Selecting previously unselected package libesmtp6:amd64. Preparing to unpack .../06-libesmtp6_1.1.0-3.2+b2_amd64.deb ... Unpacking libesmtp6:amd64 (1.1.0-3.2+b2) ... Preparing to unpack .../07-libfuse3-4_3.18.3-1_amd64.deb ... Unpacking libfuse3-4:amd64 (3.18.3-1) over (3.18.2-2) ... Preparing to unpack .../08-libhdf5-320_2.2.0+repack-5_amd64.deb ... Unpacking libhdf5-320:amd64 (2.2.0+repack-5) over (2.2.0+repack-4) ... Preparing to unpack .../09-libhdf5-hl-320_2.2.0+repack-5_amd64.deb ... Unpacking libhdf5-hl-320:amd64 (2.2.0+repack-5) over (2.2.0+repack-4) ... Preparing to unpack .../10-libpmix2t64_6.1.1~rc2-5_amd64.deb ... Unpacking libpmix2t64:amd64 (6.1.1~rc2-5) over (6.0.0+really5.0.9-3+b2) ... Preparing to unpack .../11-libopenmpi40_5.0.10-6_amd64.deb ... Unpacking libopenmpi40:amd64 (5.0.10-6) over (5.0.10-1) ... Preparing to unpack .../12-libhdf5-openmpi-320_2.2.0+repack-5_amd64.deb ... Unpacking libhdf5-openmpi-320:amd64 (2.2.0+repack-5) over (2.2.0+repack-4) ... Preparing to unpack .../13-libibumad3_65.0-1_amd64.deb ... Unpacking libibumad3:amd64 (65.0-1) over (64.0-1) ... Preparing to unpack .../14-libibmad5_65.0-1_amd64.deb ... Unpacking libibmad5:amd64 (65.0-1) over (64.0-1) ... Preparing to unpack .../15-libllvm21_1%3a21.1.8-12_amd64.deb ... Unpacking libllvm21:amd64 (1:21.1.8-12) over (1:21.1.8-10) ... Preparing to unpack .../16-librdmacm1t64_65.0-1_amd64.deb ... Unpacking librdmacm1t64:amd64 (65.0-1) over (64.0-1) ... Setting up bsdutils (1:2.42.3-1) ... Setting up libpython3.14-minimal:amd64 (3.14.7-4) ... Setting up libibumad3:amd64 (65.0-1) ... Setting up systemd (262~rc3-1) ... [ESC][0;1;31m"/home" already exists and is not a directory.[ESC][0m Setting up libesmtp6:amd64 (1.1.0-3.2+b2) ... Setting up libibmad5:amd64 (65.0-1) ... Setting up libgomp1:amd64 (16.2.0-2) ... Setting up libllvm21:amd64 (1:21.1.8-12) ... Setting up libpmix2t64:amd64 (6.1.1~rc2-5) ... Setting up libgfortran5:amd64 (16.2.0-2) ... Setting up mount (2.42.3-1) ... Setting up libhsa-runtime64-1:amd64 (6.4.3+dfsg-5) ... Setting up libclang-common-21-dev:amd64 (1:21.1.8-12) ... Setting up libhdf5-320:amd64 (2.2.0+repack-5) ... Setting up libfuse3-4:amd64 (3.18.3-1) ... Setting up python3.14-minimal (3.14.7-4) ... Setting up login (1:4.16.0-2+really2.42.3-1) ... Setting up libopenmpi40:amd64 (5.0.10-6) ... Setting up libibverbs1:amd64 (65.0-1) ... Setting up ibverbs-providers:amd64 (65.0-1) ... Setting up libpython3.14-stdlib:amd64 (3.14.7-4) ... Setting up libamdhip64-6:amd64 (6.4.3-5) ... Setting up libhdf5-hl-320:amd64 (2.2.0+repack-5) ... Setting up librdmacm1t64:amd64 (65.0-1) ... Setting up python3.14 (3.14.7-4) ... Setting up libhdf5-openmpi-320:amd64 (2.2.0+repack-5) ... Processing triggers for libselinux1:amd64 (3.11-2) ... Processing triggers for libc-bin (2.43-5) ... 0m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-yf', 'dist-upgrade'] 0m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m31.3s DUMP: 77361f2ce895927b7b6d90fa394eecee - 0m31.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m31.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'show', '--no-all-versions', 'bitshuffle'] 0m31.6s DUMP: Package: bitshuffle Version: 0.5.2-3 Installed-Size: 684 Maintainer: Debian PaN Maintainers Architecture: amd64 Provides: hdf5-filter-plugin-bshuf-mpi, hdf5-filter-plugin-bshuf-openmpi, hdf5-filter-plugin-bshuf-serial Depends: python3 (<< 3.15), python3 (>= 3.14~), python3-h5py (>= 2.4.0), python3-numpy, python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.34), libgomp1 (>= 6), libhdf5-320 (>= 2.1.0), libhdf5-openmpi-320 (>= 1.10.0), liblz4-1 (>= 0.0~r130), liblzf1 (>= 1.5), libzstd1 (>= 1.5.5) Description-en: filter for improving compression of typed binary data Bitshuffle is an algorithm that rearranges typed, binary data for improving compression, as well as a python/C package that implements this algorithm within the Numpy framework. . The library can be used along side HDF5 to compress and decompress datasets and is integrated through the dynamically loaded filters framework. Bitshuffle is HDF5 filter number 32008. . Algorithmically, Bitshuffle is closely related to HDF5's Shuffle filter except it operates at the bit level instead of the byte level. Arranging a typed data array in to a matrix with the elements as the rows and the bits within the elements as the columns, Bitshuffle "transposes" the matrix, such that all the least-significant-bits are in a row, etc. This transpose is performed within blocks of data roughly 8kB long. . This does not in itself compress data, only rearranges it for more efficient compression. To perform the actual compression you will need a compression library. Bitshuffle has been designed to be well matched Marc Lehmann's LZF as well as LZ4. Note that because Bitshuffle modifies the data at the bit level, sophisticated entropy reducing compression libraries such as GZIP and BZIP are unlikely to achieve significantly better compression than simpler and faster duplicate-string-elimination algorithms such as LZF and LZ4. Bitshuffle thus includes routines (and HDF5 filter options) to apply LZ4 compression to each block after shuffling. . The Bitshuffle algorithm relies on neighbouring elements of a dataset being highly correlated to improve data compression. Any correlations that span at least 24 elements of the dataset may be exploited to improve compression. Description-md5: cd2f1aef4b1fdac0de3b63a646625903 Homepage: https://github.com/kiyo-masui/bitshuffle Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/b/bitshuffle/bitshuffle_0.5.2-3_amd64.deb Size: 144064 MD5sum: 33b72a02f4dd553cfc3db37d4c80a95f SHA256: 1741b114164940813452c8da112bb0baf0e4f574386e4d3f89755972bd442ded 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'show', '--no-all-versions', 'bitshuffle'] 0m31.6s INFO: apt-cache knows about the following packages: bitshuffle 0m31.6s INFO: Running scripts pre_install 0m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_database-server'] 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_database-server'] 0m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_exceptions'] 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_exceptions'] 0m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_extras'] 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_extras'] 0m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture'] 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture'] 0m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy'] 0m31.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy'] 0m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy', 'bitshuffle'] 0m31.7s DUMP: bitshuffle: Installed: 0.5.2-3 Candidate: 0.5.2-3 Version table: *** 0.5.2-3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy', 'bitshuffle'] 0m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-y', 'install', 'bitshuffle'] 0m32.6s DUMP: Reading package lists... Building dependency tree... Reading state information... bitshuffle is already the newest version (0.5.2-3). Solving dependencies... The following package was automatically installed and is no longer required: libhsakmt1 Use 'sudo apt autoremove' to remove it. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m32.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-y', 'install', 'bitshuffle'] 0m32.6s INFO: Running scripts post_install 0m32.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_install_exceptions'] 0m32.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_install_exceptions'] 0m32.6s INFO: Running scripts post_distupgrade 0m32.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m32.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m32.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_exceptions'] 0m32.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_exceptions'] 0m32.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m32.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m32.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m32.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m32.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_zz_backports'] 0m32.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_distupgrade_zz_backports'] 0m32.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m33.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m33.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m33.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m33.6s INFO: Running scripts pre_install 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_database-server'] 0m33.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_database-server'] 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_exceptions'] 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_exceptions'] 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_extras'] 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_extras'] 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture'] 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture'] 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy'] 0m33.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy'] 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy', 'bitshuffle'] 0m33.7s DUMP: bitshuffle: Installed: 0.5.2-3 Candidate: 0.5.2-3 Version table: *** 0.5.2-3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-cache', 'policy', 'bitshuffle'] 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-y', 'install', 'bitshuffle=0.5.2-3'] 0m34.8s DUMP: Reading package lists... Building dependency tree... Reading state information... bitshuffle is already the newest version (0.5.2-3). Solving dependencies... The following package was automatically installed and is no longer required: libhsakmt1 Use 'sudo apt autoremove' to remove it. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m34.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', '-y', 'install', 'bitshuffle=0.5.2-3'] 0m34.8s INFO: Running scripts post_install 0m34.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_install_exceptions'] 0m34.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_install_exceptions'] 0m34.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m35.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m35.7s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', '-ac', '--ignore-obsolete'] 0m37.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', '-ac', '--ignore-obsolete'] 0m37.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m37.2s DUMP: 0.17.5+b5 0m37.2s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m37.2s INFO: Running adequate version 0.17.5+b5 now. 0m37.2s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'bitshuffle'] 0m37.3s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'bitshuffle'] 0m37.3s INFO: Running scripts pre_remove 0m37.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m37.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m37.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m37.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m37.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m38.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m38.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m38.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m38.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m38.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m38.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_exceptions'] 0m39.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/pre_remove_exceptions'] 0m39.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m39.0s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed bitshuffle bitshuffle 0.5.2-3 install ok installed bsdutils bsdutils 1:2.42.3-1 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.11 install ok installed findutils findutils 4.11.0-2 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-2 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed ibverbs-providers:amd64 ibverbs-providers 65.0-1 install ok installed init-system-helpers init-system-helpers 1.69+nmu1 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libamd-comgr3:amd64 libamd-comgr3 7.0.2+dfsg-3 install ok installed libamdhip64-6:amd64 libamdhip64-6 6.4.3-5 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b2 install ok installed libblas3:amd64 libblas3 3.12.1-8 install ok installed libblkid1:amd64 libblkid1 2.42.3-1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-5 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-5 install ok installed libc6:amd64 libc6 2.43-5 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1 install ok installed libclang-common-21-dev:amd64 libclang-common-21-dev 1:21.1.8-12 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.134-3 install ok installed libdrm-common libdrm-common 2.4.134-3 install ok installed libdrm2:amd64 libdrm2 2.4.134-3 install ok installed libedit2:amd64 libedit2 3.1-20260512-1 install ok installed libelf1t64:amd64 libelf1t64 0.196-1 install ok installed libesmtp6:amd64 libesmtp6 1.1.0-3.2+b2 install ok installed libevent-core-2.1-7t64:amd64 libevent-core-2.1-7t64 2.1.13-stable-1 install ok installed libevent-pthreads-2.1-7t64:amd64 libevent-pthreads-2.1-7t64 2.1.13-stable-1 install ok installed libexpat1:amd64 libexpat1 2.8.4-1 install ok installed libfabric1:amd64 libfabric1 2.1.0-1.1+b2 install ok installed libffi8:amd64 libffi8 3.8.0-2 install ok installed libfuse3-4:amd64 libfuse3-4 3.18.3-1 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-2 install ok installed libgfortran5:amd64 libgfortran5 16.2.0-2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libgomp1:amd64 libgomp1 16.2.0-2 install ok installed libhdf5-320:amd64 libhdf5-320 2.2.0+repack-5 install ok installed libhdf5-hl-320:amd64 libhdf5-hl-320 2.2.0+repack-5 install ok installed libhdf5-openmpi-320:amd64 libhdf5-openmpi-320 2.2.0+repack-5 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed libhsa-runtime64-1:amd64 libhsa-runtime64-1 6.4.3+dfsg-5 install ok installed libhsakmt1:amd64 libhsakmt1 6.4.3+dfsg-4 install ok installed libhwloc-plugins:amd64 libhwloc-plugins 2.14.0-2 install ok installed libhwloc15:amd64 libhwloc15 2.14.0-2 install ok installed libibmad5:amd64 libibmad5 65.0-1 install ok installed libibumad3:amd64 libibumad3 65.0-1 install ok installed libibverbs1:amd64 libibverbs1 65.0-1 install ok installed liblapack3:amd64 liblapack3 3.12.1-8 install ok installed libllvm21:amd64 libllvm21 1:21.1.8-12 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzf1:amd64 liblzf1 3.6-4+b4 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.2.0-2 install ok installed libmount1:amd64 libmount1 2.42.3-1 install ok installed libmunge2:amd64 libmunge2 0.5.18-1 install ok installed libncursesw6:amd64 libncursesw6 6.6+20260608-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libnl-3-200:amd64 libnl-3-200 3.12.0-2+b1 install ok installed libnl-route-3-200:amd64 libnl-route-3-200 3.12.0-2+b1 install ok installed libnuma1:amd64 libnuma1 2.0.19-1+b2 install ok installed libopenmpi40:amd64 libopenmpi40 5.0.10-6 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpciaccess0:amd64 libpciaccess0 0.19-2 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-3 install ok installed libpmix2t64:amd64 libpmix2t64 6.1.1~rc2-5 install ok installed libpsm2-2 libpsm2-2 11.2.185-2.1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.14.7-3 install ok installed libpython3.14-minimal:amd64 libpython3.14-minimal 3.14.7-4 install ok installed libpython3.14-stdlib:amd64 libpython3.14-stdlib 3.14.7-4 install ok installed librdmacm1t64:amd64 librdmacm1t64 65.0-1 install ok installed libreadline8t64:amd64 libreadline8t64 8.3-4 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b1 install ok installed libselinux1:amd64 libselinux1 3.11-2 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b1 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.3-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.53.4-2 install ok installed libssl3t64:amd64 libssl3t64 3.6.4-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-2 install ok installed libsystemd-shared:amd64 libsystemd-shared 262~rc3-1 install ok installed libsystemd0:amd64 libsystemd0 262~rc3-1 install ok installed libsz2:amd64 libsz2 1.1.7-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libucc1:amd64 libucc1 1.9.0-1 install ok installed libucx0:amd64 libucx0 1.22.0-1 install ok installed libudev1:amd64 libudev1 262~rc3-1 install ok installed libuuid1:amd64 libuuid1 2.42.3-1 install ok installed libx11-6:amd64 libx11-6 2:1.8.13-1 install ok installed libx11-data libx11-data 2:1.8.13-1 install ok installed libxau6:amd64 libxau6 1:1.0.11-1+b2 install ok installed libxcb1:amd64 libxcb1 1.17.0-2+b2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.5-2+b1 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b4 install ok installed libxml2-16:amd64 libxml2-16 2.15.4+dfsg-1 install ok installed libxnvctrl0:amd64 libxnvctrl0 535.171.04-1+b3 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libz3-4:amd64 libz3-4 4.13.3-1.1 install ok installed libze1:amd64 libze1 1.32.0-1 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.3-1 install ok installed login.defs login.defs 1:4.19.3-2 install ok installed mawk mawk 1.3.4.20260302-1 install ok installed media-types media-types 14.0.0 install ok installed mount mount 2.42.3-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed netbase netbase 6.6 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.3.4-1+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.4-1 install ok installed passwd passwd 1:4.19.3-2 install ok installed pci.ids pci.ids 0.0~2026.07.21-1 install ok installed perl-base perl-base 5.42.3-1 install ok installed python3 python3 3.14.7-3 install ok installed python3-h5py python3-h5py 3.16.0-6 install ok installed python3-h5py-serial python3-h5py-serial 3.16.0-6 install ok installed python3-minimal python3-minimal 3.14.7-3 install ok installed python3-numpy python3-numpy 1:2.4.6+ds-4+b1 install ok installed python3-numpy-dev:amd64 python3-numpy-dev 1:2.4.6+ds-4+b1 install ok installed python3.14 python3.14 3.14.7-4 install ok installed python3.14-minimal python3.14-minimal 3.14.7-4 install ok installed readline-common readline-common 8.3-4 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.5.0-1 install ok installed systemd systemd 262~rc3-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-5 install ok installed tzdata tzdata 2026c-1 install ok installed util-linux util-linux 2.42.3-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 0m39.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m39.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', 'remove', '--allow-remove-essential', 'ibverbs-providers:amd64', 'libamd-comgr3:amd64', 'libamdhip64-6:amd64', 'libblas3:amd64', 'libclang-common-21-dev:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libesmtp6:amd64', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libexpat1:amd64', 'libfabric1:amd64', 'libffi8:amd64', 'libfuse3-4:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libhdf5-320:amd64', 'libhdf5-hl-320:amd64', 'libhdf5-openmpi-320:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'liblapack3:amd64', 'libllvm21:amd64', 'liblzf1:amd64', 'libmunge2:amd64', 'libncursesw6:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi40:amd64', 'libpciaccess0:amd64', 'libpmix2t64:amd64', 'libpsm2-2', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'librdmacm1t64:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libucc1:amd64', 'libucx0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2-16:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'libze1:amd64', 'media-types', 'netbase', 'ocl-icd-libopencl1:amd64', 'pci.ids', 'python3', 'python3-h5py', 'python3-h5py-serial', 'python3-minimal', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3.14', 'python3.14-minimal', 'readline-common', 'systemd', 'bitshuffle'] 0m41.4s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: bitshuffle ibverbs-providers libamd-comgr3 libamdhip64-6 libblas3 libclang-common-21-dev libdrm-amdgpu1 libdrm-common libdrm2 libedit2 libelf1t64 libesmtp6 libevent-core-2.1-7t64 libevent-pthreads-2.1-7t64 libexpat1 libfabric1 libffi8 libfuse3-4 libgfortran5 libgomp1 libhdf5-320 libhdf5-hl-320 libhdf5-openmpi-320 libhsa-runtime64-1 libhsakmt1 libhwloc-plugins libhwloc15 libibmad5 libibumad3 libibverbs1 liblapack3 libllvm21 liblzf1 libmunge2 libncursesw6 libnl-3-200 libnl-route-3-200 libnuma1 libopenmpi40 libpciaccess0 libpmix2t64 libpsm2-2 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib librdmacm1t64 libreadline8t64 libsqlite3-0 libsystemd-shared libsz2 libucc1 libucx0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2-16 libxnvctrl0 libz3-4 libze1 media-types netbase ocl-icd-libopencl1 pci.ids python3 python3-h5py python3-h5py-serial python3-minimal python3-numpy python3-numpy-dev python3.14 python3.14-minimal readline-common systemd 0 upgraded, 0 newly installed, 76 to remove and 0 not upgraded. After this operation, 423 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9069 files and directories currently installed.) Removing bitshuffle (0.5.2-3) ... Removing libhdf5-openmpi-320:amd64 (2.2.0+repack-5) ... Removing libopenmpi40:amd64 (5.0.10-6) ... Removing libfabric1:amd64 (2.1.0-1.1+b2) ... Removing ibverbs-providers:amd64 (65.0-1) ... Removing libucc1:amd64 (1.9.0-1) ... Removing libucx0:amd64 (1.22.0-1) ... Removing libamdhip64-6:amd64 (6.4.3-5) ... Removing libamd-comgr3:amd64 (7.0.2+dfsg-3) ... Removing python3-h5py (3.16.0-6) ... Removing python3-h5py-serial (3.16.0-6) ... Removing python3-numpy (1:2.4.6+ds-4+b1) ... Removing liblapack3:amd64 (3.12.1-8) ... Removing libblas3:amd64 (3.12.1-8) ... Removing libclang-common-21-dev:amd64 (1:21.1.8-12) ... Removing libhsakmt1:amd64 (6.4.3+dfsg-4) ... Removing libhsa-runtime64-1:amd64 (6.4.3+dfsg-5) ... Removing libdrm-amdgpu1:amd64 (2.4.134-3) ... Removing libdrm2:amd64 (2.4.134-3) ... Removing libdrm-common (2.4.134-3) ... Removing libllvm21:amd64 (1:21.1.8-12) ... Removing libedit2:amd64 (3.1-20260512-1) ... Removing libelf1t64:amd64 (0.196-1) ... Removing libpmix2t64:amd64 (6.1.1~rc2-5) ... Removing libesmtp6:amd64 (1.1.0-3.2+b2) ... Removing libevent-pthreads-2.1-7t64:amd64 (2.1.13-stable-1) ... Removing libevent-core-2.1-7t64:amd64 (2.1.13-stable-1) ... Removing python3 (3.14.7-3) ... Removing python3.14 (3.14.7-4) ... Removing python3-minimal (3.14.7-3) ... Removing python3.14-minimal (3.14.7-4) ... Removing libexpat1:amd64 (2.8.4-1) ... Removing libpython3-stdlib:amd64 (3.14.7-3) ... Removing libpython3.14-stdlib:amd64 (3.14.7-4) ... find: '/usr/lib/python3': No such file or directory Removing libffi8:amd64 (3.8.0-2) ... Removing libfuse3-4:amd64 (3.18.3-1) ... Removing libgfortran5:amd64 (16.2.0-2) ... Removing libgomp1:amd64 (16.2.0-2) ... Removing libhdf5-hl-320:amd64 (2.2.0+repack-5) ... Removing libhdf5-320:amd64 (2.2.0+repack-5) ... Removing libhwloc-plugins:amd64 (2.14.0-2) ... Removing libhwloc15:amd64 (2.14.0-2) ... Removing libibmad5:amd64 (65.0-1) ... Removing libibumad3:amd64 (65.0-1) ... Removing librdmacm1t64:amd64 (65.0-1) ... Removing libibverbs1:amd64 (65.0-1) ... Removing liblzf1:amd64 (3.6-4+b4) ... Removing libmunge2:amd64 (0.5.18-1) ... Removing libncursesw6:amd64 (6.6+20260608-2) ... Removing libnl-route-3-200:amd64 (3.12.0-2+b1) ... Removing libnl-3-200:amd64 (3.12.0-2+b1) ... Removing libpsm2-2 (11.2.185-2.1) ... Removing libnuma1:amd64 (2.0.19-1+b2) ... Removing libpciaccess0:amd64 (0.19-2) ... Removing libpython3.14-minimal:amd64 (3.14.7-4) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.3-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsqlite3-0:amd64 (3.53.4-2) ... Removing systemd (262~rc3-1) ... Removing libsystemd-shared:amd64 (262~rc3-1) ... Removing libsz2:amd64 (1.1.7-1) ... Removing libxnvctrl0:amd64 (535.171.04-1+b3) ... Removing libxext6:amd64 (2:1.3.4-1+b4) ... Removing libx11-6:amd64 (2:1.8.13-1) ... Removing libx11-data (2:1.8.13-1) ... Removing libxcb1:amd64 (1.17.0-2+b2) ... Removing libxau6:amd64 (1:1.0.11-1+b2) ... Removing libxdmcp6:amd64 (1:1.1.5-2+b1) ... Removing libxml2-16:amd64 (2.15.4+dfsg-1) ... Removing libz3-4:amd64 (4.13.3-1.1) ... Removing libze1:amd64 (1.32.0-1) ... Removing media-types (14.0.0) ... Removing netbase (6.6) ... Removing ocl-icd-libopencl1:amd64 (2.3.4-1+b1) ... Removing pci.ids (0.0~2026.07.21-1) ... Removing python3-numpy-dev:amd64 (1:2.4.6+ds-4+b1) ... Removing readline-common (8.3-4) ... Processing triggers for libc-bin (2.43-5) ... 0m41.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', 'remove', '--allow-remove-essential', 'ibverbs-providers:amd64', 'libamd-comgr3:amd64', 'libamdhip64-6:amd64', 'libblas3:amd64', 'libclang-common-21-dev:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libesmtp6:amd64', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libexpat1:amd64', 'libfabric1:amd64', 'libffi8:amd64', 'libfuse3-4:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libhdf5-320:amd64', 'libhdf5-hl-320:amd64', 'libhdf5-openmpi-320:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'liblapack3:amd64', 'libllvm21:amd64', 'liblzf1:amd64', 'libmunge2:amd64', 'libncursesw6:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi40:amd64', 'libpciaccess0:amd64', 'libpmix2t64:amd64', 'libpsm2-2', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'librdmacm1t64:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libucc1:amd64', 'libucx0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2-16:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'libze1:amd64', 'media-types', 'netbase', 'ocl-icd-libopencl1:amd64', 'pci.ids', 'python3', 'python3-h5py', 'python3-h5py-serial', 'python3-minimal', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3.14', 'python3.14-minimal', 'readline-common', 'systemd', 'bitshuffle'] 0m41.4s INFO: Running scripts post_remove 0m41.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_remove_exceptions'] 0m41.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_remove_exceptions'] 0m41.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg', '--purge', 'ibverbs-providers:amd64', 'libamd-comgr3:amd64', 'libamdhip64-6:amd64', 'libblas3:amd64', 'libclang-common-21-dev:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libesmtp6:amd64', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libexpat1:amd64', 'libfabric1:amd64', 'libffi8:amd64', 'libfuse3-4:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libhdf5-320:amd64', 'libhdf5-hl-320:amd64', 'libhdf5-openmpi-320:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'liblapack3:amd64', 'libllvm21:amd64', 'liblzf1:amd64', 'libmunge2:amd64', 'libncursesw6:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi40:amd64', 'libpciaccess0:amd64', 'libpmix2t64:amd64', 'libpsm2-2', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'librdmacm1t64:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libucc1:amd64', 'libucx0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2-16:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'libze1:amd64', 'media-types', 'netbase', 'ocl-icd-libopencl1:amd64', 'pci.ids', 'python3', 'python3-h5py', 'python3-h5py-serial', 'python3-minimal', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3.14', 'python3.14-minimal', 'readline-common', 'systemd'] 0m41.6s DUMP: (Reading database ... 5000 files and directories currently installed.) Purging configuration files for ibverbs-providers:amd64 (65.0-1) ... dpkg: warning: ignoring request to remove libamd-comgr3 which is not installed dpkg: warning: ignoring request to remove libamdhip64-6 which is not installed dpkg: warning: ignoring request to remove libblas3 which is not installed dpkg: warning: ignoring request to remove libclang-common-21-dev which is not installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which is not installed dpkg: warning: ignoring request to remove libdrm-common which is not installed dpkg: warning: ignoring request to remove libdrm2 which is not installed dpkg: warning: ignoring request to remove libedit2 which is not installed dpkg: warning: ignoring request to remove libelf1t64 which is not installed dpkg: warning: ignoring request to remove libesmtp6 which is not installed dpkg: warning: ignoring request to remove libevent-core-2.1-7t64 which is not installed dpkg: warning: ignoring request to remove libevent-pthreads-2.1-7t64 which is not installed dpkg: warning: ignoring request to remove libexpat1 which is not installed dpkg: warning: ignoring request to remove libfabric1 which is not installed dpkg: warning: ignoring request to remove libffi8 which is not installed dpkg: warning: ignoring request to remove libfuse3-4 which is not installed dpkg: warning: ignoring request to remove libgfortran5 which is not installed dpkg: warning: ignoring request to remove libgomp1 which is not installed dpkg: warning: ignoring request to remove libhdf5-320 which is not installed dpkg: warning: ignoring request to remove libhdf5-hl-320 which is not installed dpkg: warning: ignoring request to remove libhdf5-openmpi-320 which is not installed dpkg: warning: ignoring request to remove libhsa-runtime64-1 which is not installed dpkg: warning: ignoring request to remove libhsakmt1 which is not installed dpkg: warning: ignoring request to remove libhwloc-plugins which is not installed dpkg: warning: ignoring request to remove libhwloc15 which is not installed dpkg: warning: ignoring request to remove libibmad5 which is not installed dpkg: warning: ignoring request to remove libibumad3 which is not installed dpkg: warning: ignoring request to remove libibverbs1 which is not installed dpkg: warning: ignoring request to remove liblapack3 which is not installed dpkg: warning: ignoring request to remove libllvm21 which is not installed dpkg: warning: ignoring request to remove liblzf1 which is not installed dpkg: warning: ignoring request to remove libmunge2 which is not installed dpkg: warning: ignoring request to remove libncursesw6 which is not installed Purging configuration files for libnl-3-200:amd64 (3.12.0-2+b1) ... dpkg: warning: ignoring request to remove libnl-route-3-200 which is not installed dpkg: warning: ignoring request to remove libnuma1 which is not installed dpkg: warning: ignoring request to remove libopenmpi40 which is not installed dpkg: warning: ignoring request to remove libpciaccess0 which is not installed dpkg: warning: ignoring request to remove libpmix2t64 which is not installed dpkg: warning: ignoring request to remove libpsm2-2 which is not installed dpkg: warning: ignoring request to remove libpython3-stdlib which is not installed Purging configuration files for libpython3.14-minimal:amd64 (3.14.7-4) ... dpkg: warning: ignoring request to remove libpython3.14-stdlib which is not installed dpkg: warning: ignoring request to remove librdmacm1t64 which is not installed Purging configuration files for libreadline8t64:amd64 (8.3-4) ... dpkg: warning: ignoring request to remove libsqlite3-0 which is not installed dpkg: warning: ignoring request to remove libsystemd-shared which is not installed dpkg: warning: ignoring request to remove libsz2 which is not installed dpkg: warning: ignoring request to remove libucc1 which is not installed dpkg: warning: ignoring request to remove libucx0 which is not installed dpkg: warning: ignoring request to remove libx11-6 which is not installed dpkg: warning: ignoring request to remove libx11-data which is not installed dpkg: warning: ignoring request to remove libxau6 which is not installed dpkg: warning: ignoring request to remove libxcb1 which is not installed dpkg: warning: ignoring request to remove libxdmcp6 which is not installed dpkg: warning: ignoring request to remove libxext6 which is not installed dpkg: warning: ignoring request to remove libxml2-16 which is not installed dpkg: warning: ignoring request to remove libxnvctrl0 which is not installed dpkg: warning: ignoring request to remove libz3-4 which is not installed dpkg: warning: ignoring request to remove libze1 which is not installed Purging configuration files for media-types (14.0.0) ... Purging configuration files for netbase (6.6) ... dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which is not installed dpkg: warning: ignoring request to remove pci.ids which is not installed Purging configuration files for python3 (3.14.7-3) ... dpkg: warning: ignoring request to remove python3-h5py which is not installed dpkg: warning: ignoring request to remove python3-h5py-serial which is not installed dpkg: warning: ignoring request to remove python3-minimal which is not installed Purging configuration files for python3-numpy (1:2.4.6+ds-4+b1) ... dpkg: warning: ignoring request to remove python3-numpy-dev which is not installed dpkg: warning: ignoring request to remove python3.14 which is not installed Purging configuration files for python3.14-minimal (3.14.7-4) ... Purging configuration files for readline-common (8.3-4) ... Purging configuration files for systemd (262~rc3-1) ... 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg', '--purge', 'ibverbs-providers:amd64', 'libamd-comgr3:amd64', 'libamdhip64-6:amd64', 'libblas3:amd64', 'libclang-common-21-dev:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libesmtp6:amd64', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libexpat1:amd64', 'libfabric1:amd64', 'libffi8:amd64', 'libfuse3-4:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libhdf5-320:amd64', 'libhdf5-hl-320:amd64', 'libhdf5-openmpi-320:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'liblapack3:amd64', 'libllvm21:amd64', 'liblzf1:amd64', 'libmunge2:amd64', 'libncursesw6:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnuma1:amd64', 'libopenmpi40:amd64', 'libpciaccess0:amd64', 'libpmix2t64:amd64', 'libpsm2-2', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'librdmacm1t64:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libucc1:amd64', 'libucx0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2-16:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'libze1:amd64', 'media-types', 'netbase', 'ocl-icd-libopencl1:amd64', 'pci.ids', 'python3', 'python3-h5py', 'python3-h5py-serial', 'python3-minimal', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3.14', 'python3.14-minimal', 'readline-common', 'systemd'] 0m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg', '--purge', 'bitshuffle'] 0m41.6s DUMP: dpkg: warning: ignoring request to remove bitshuffle which is not installed 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg', '--purge', 'bitshuffle'] 0m41.6s INFO: Running scripts post_purge 0m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_purge_exceptions'] 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_purge_exceptions'] 0m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg', '--purge', '--pending'] 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg', '--purge', '--pending'] 0m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg', '--remove', '--pending'] 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg', '--remove', '--pending'] 0m41.6s INFO: Running scripts post_test 0m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_test_exceptions'] 0m41.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'tmp/scripts/post_test_exceptions'] 0m41.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m42.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m42.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg-divert', '--list'] 0m42.0s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m42.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'dpkg-divert', '--list'] 0m42.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', 'clean'] 0m42.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpvgbajek7', 'apt-get', 'clean'] 0m42.0s DEBUG: Recording chroot state 0m42.6s INFO: Warning: Package purging left files on system: /etc/default/locale -> ../locale.conf not owned /etc/vconsole.conf -> default/keyboard not owned /root/.ssh/ not owned /var/cache/private/ not owned /var/lib/private/ not owned /var/log/private/ not owned 0m43.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/shm'] 0m43.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/shm'] 0m43.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/console'] 0m43.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/console'] 0m43.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/ptmx'] 0m43.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/ptmx'] 0m43.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/pts'] 0m43.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/dev/pts'] 0m43.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/proc'] 0m43.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpvgbajek7/proc'] 0m43.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m43.2s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpvgbajek7'] 0m43.2s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpvgbajek7 0m43.2s INFO: PASS: Upgrading between Debian distributions. 0m43.2s INFO: PASS: All tests. 0m43.2s INFO: piuparts run ends. ret=0 End: 2026-09-16 03:17:05 GMT