Start: 2022-12-30 15:30:33 GMT [testing] Package: cif-tools Version: 1.0.1b-1 Installed-Size: 46447 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.29), libcifpp2 (>= 2.0.5), libgcc-s1 (>= 3.0), libstdc++6 (>= 11) Suggests: vim Description: Suite of tools to manipulate, validate and query mmCIF files Homepage: https://github.com/PDB-REDO/cif-tools Description-md5: e3592361fdf290a5f2e7276c35254eb2 Section: science Priority: optional Filename: pool/main/c/cif-tools/cif-tools_1.0.1b-1_amd64.deb Size: 1259768 MD5sum: 9811bdaf218182957d00f99afca6ef22 SHA256: 7a29a67785d3cf1a0a899c25108e4da5a2283802998db81e8bf54cc186a7912f [sid] Package: cif-tools Version: 1.0.7-1 Installed-Size: 72614 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libcifpp5 (>= 5.0.5), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), zlib1g (>= 1:1.2.2) Suggests: vim Description: Suite of tools to manipulate, validate and query mmCIF files Homepage: https://github.com/PDB-REDO/cif-tools Description-md5: e3592361fdf290a5f2e7276c35254eb2 Section: science Priority: optional Filename: pool/main/c/cif-tools/cif-tools_1.0.7-1_amd64.deb Size: 2145604 MD5sum: 39598d4aa9dc0c3d92548abb7d67457b SHA256: 610bc152638af8120bad453aa7fd65bfd697ff36e088506cae6eab9531b666e7 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt cif-tools=1.0.7-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt cif-tools=1.0.7-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-20-amd64 #1 SMP Debian 5.10.158-2 (2022-12-13) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpx1ev10se 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpx1ev10se 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m2.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m2.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/proc'] 0m2.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/proc'] 0m2.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/pts'] 0m2.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/pts'] 0m2.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/ptmx'] 0m2.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/ptmx'] 0m2.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/console'] 0m2.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/console'] 0m2.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/shm'] 0m2.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/shm'] 0m2.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m2.4s DEBUG: Created policy-rc.d and chmodded it. 0m2.4s DEBUG: Created resolv.conf. 0m2.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpx1ev10se/tmp/scripts/ 0m2.4s INFO: Running scripts post_chroot_unpack 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', 'update'] 0m5.3s DUMP: Get:1 http://deb.debian.org/debian bookworm InRelease [164 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 Packages [8811 kB] Get:3 http://deb.debian.org/debian bookworm/main Translation-en [5958 kB] Fetched 14.9 MB in 2s (7020 kB/s) Reading package lists... 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', 'update'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-yf', 'dist-upgrade'] 0m5.7s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-yf', 'dist-upgrade'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.1s DUMP: 186fb166c1209c641cfbda83fc6c05a7 - 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.1s INFO: Running scripts post_setup 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_dummy_users'] 0m6.8s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_dummy_users'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_forbid_home'] 0m6.8s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_forbid_home'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.9s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_minimize'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_minimize'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_zz_backports'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_setup_zz_backports'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.9s DUMP: install ok installed apt apt 2.5.4 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2-2+b1 install ok installed bsdutils bsdutils 1:2.38.1-4 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-9 install ok installed debconf debconf 1.5.80 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-3 install ok installed dpkg dpkg 1.21.13 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1+b1 install ok installed findutils findutils 4.9.0-3 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-10 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-2 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.4 install ok installed libattr1:amd64 libattr1 1:2.5.1-3 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libblkid1:amd64 libblkid1 2.38.1-4 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-6 install ok installed libc6:amd64 libc6 2.36-6 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.66-3 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.265 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-3 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-10 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.0-0.1 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-4 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-5 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-5 install ok installed libpam-runtime libpam-runtime 1.5.2-5 install ok installed libpam0g:amd64 libpam0g 1.5.2-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-3 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-6 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b4 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b4 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-4 install ok installed libss2:amd64 libss2 1.46.6~rc1-1+b1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-10 install ok installed libsystemd0:amd64 libsystemd0 252.4-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.3+20220423-2 install ok installed libudev1:amd64 libudev1 252.4-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-4 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg-1 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1+b1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-4 install ok installed ncurses-base ncurses-base 6.3+20220423-2 install ok installed ncurses-bin ncurses-bin 6.3+20220423-2 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-6 install ok installed perl-base perl-base 5.36.0-6 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-6 install ok installed sed sed 4.8-1 install ok installed sysvinit-utils sysvinit-utils 3.06-2 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2022f-1 install ok installed usr-is-merged usr-is-merged 35 install ok installed usrmerge usrmerge 35 install ok installed util-linux util-linux 2.38.1-4 install ok installed util-linux-extra util-linux-extra 2.38.1-4 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.9s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m7.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m7.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m7.4s INFO: Running scripts is_testable 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/is_testable_uninstallable'] 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/is_testable_uninstallable'] 0m7.4s INFO: Running scripts pre_test 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_test_exceptions'] 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_test_exceptions'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_test_root_password'] 0m7.4s DUMP: New password: Retype new password: passwd: password updated successfully 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_test_root_password'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'show', '--no-all-versions', 'cif-tools'] 0m7.7s DUMP: Package: cif-tools Version: 1.0.1b-1 Installed-Size: 46447 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libboost-iostreams1.74.0 (>= 1.74.0), libboost-program-options1.74.0 (>= 1.74.0), libc6 (>= 2.29), libcifpp2 (>= 2.0.5), libgcc-s1 (>= 3.0), libstdc++6 (>= 11) Suggests: vim Description-en: Suite of tools to manipulate, validate and query mmCIF files This package contains a suite of tools for the manipulation of mmCIF files. . The structure of macro molecules is nowadays recorded in mmCIF files. Until recently however the ancient PDB file format was used by many programs but that format has since long been deprecated. . This package provides two tools, pdb2cif and cif2pdb, that can convert files from one format into the other, provided that data fits of course. . Other tools are cif-validate, cif-grep, cif-diff, cif-merge and mmCQL. The latter can be used to manipulate an mmCIF file as if it were a SQL like database using SELECT, UPDATE, INSERT and DELETE commands. . This package depends on libcifpp. Description-md5: e3592361fdf290a5f2e7276c35254eb2 Homepage: https://github.com/PDB-REDO/cif-tools Section: science Priority: optional Filename: pool/main/c/cif-tools/cif-tools_1.0.1b-1_amd64.deb Size: 1259768 MD5sum: 9811bdaf218182957d00f99afca6ef22 SHA256: 7a29a67785d3cf1a0a899c25108e4da5a2283802998db81e8bf54cc186a7912f 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'show', '--no-all-versions', 'cif-tools'] 0m7.7s INFO: apt-cache knows about the following packages: cif-tools 0m7.7s INFO: Running scripts pre_install 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_database-server'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_database-server'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_exceptions'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_exceptions'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_extras'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_extras'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy'] 0m7.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release o=Debian,a=testing,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy'] 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy', 'cif-tools'] 0m7.9s DUMP: cif-tools: Installed: (none) Candidate: 1.0.1b-1 Version table: 1.0.1b-1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy', 'cif-tools'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-y', 'install', 'cif-tools'] 0m10.7s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: libboost-iostreams1.74.0 libboost-program-options1.74.0 libboost-regex1.74.0 libcifpp-data libcifpp2 libicu72 Suggested packages: vim The following NEW packages will be installed: cif-tools libboost-iostreams1.74.0 libboost-program-options1.74.0 libboost-regex1.74.0 libcifpp-data libcifpp2 libicu72 0 upgraded, 7 newly installed, 0 to remove and 0 not upgraded. Need to get 13.1 MB of archives. After this operation, 101 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 libboost-iostreams1.74.0 amd64 1.74.0-18.1 [240 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libboost-program-options1.74.0 amd64 1.74.0-18.1 [328 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 libboost-regex1.74.0 amd64 1.74.0-18.1 [487 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 libcifpp-data all 2.0.5-4 [438 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 libcifpp2 amd64 2.0.5-4+b2 [929 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 cif-tools amd64 1.0.1b-1 [1260 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.1 MB in 0s (42.4 MB/s) Selecting previously unselected package libboost-iostreams1.74.0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8605 files and directories currently installed.) Preparing to unpack .../0-libboost-iostreams1.74.0_1.74.0-18.1_amd64.deb ... Unpacking libboost-iostreams1.74.0:amd64 (1.74.0-18.1) ... Selecting previously unselected package libboost-program-options1.74.0:amd64. Preparing to unpack .../1-libboost-program-options1.74.0_1.74.0-18.1_amd64.deb ... Unpacking libboost-program-options1.74.0:amd64 (1.74.0-18.1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../2-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libboost-regex1.74.0:amd64. Preparing to unpack .../3-libboost-regex1.74.0_1.74.0-18.1_amd64.deb ... Unpacking libboost-regex1.74.0:amd64 (1.74.0-18.1) ... Selecting previously unselected package libcifpp-data. Preparing to unpack .../4-libcifpp-data_2.0.5-4_all.deb ... Unpacking libcifpp-data (2.0.5-4) ... Selecting previously unselected package libcifpp2:amd64. Preparing to unpack .../5-libcifpp2_2.0.5-4+b2_amd64.deb ... Unpacking libcifpp2:amd64 (2.0.5-4+b2) ... Selecting previously unselected package cif-tools. Preparing to unpack .../6-cif-tools_1.0.1b-1_amd64.deb ... Unpacking cif-tools (1.0.1b-1) ... Setting up libicu72:amd64 (72.1-3) ... Setting up libboost-iostreams1.74.0:amd64 (1.74.0-18.1) ... Setting up libboost-program-options1.74.0:amd64 (1.74.0-18.1) ... Setting up libboost-regex1.74.0:amd64 (1.74.0-18.1) ... Setting up libcifpp-data (2.0.5-4) ... Setting up libcifpp2:amd64 (2.0.5-4+b2) ... Setting up cif-tools (1.0.1b-1) ... Processing triggers for libc-bin (2.36-6) ... 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-y', 'install', 'cif-tools'] 0m10.7s INFO: Running scripts post_install 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_install_exceptions'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_install_exceptions'] 0m10.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m11.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m11.0s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpx1ev10se to sid 0m11.0s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m11.0s INFO: Running scripts pre_distupgrade 0m11.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m11.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m11.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m11.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m11.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', 'update'] 0m15.3s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [161 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9383 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6949 kB] Fetched 16.5 MB in 3s (4882 kB/s) Reading package lists... 0m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', 'update'] 0m15.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-yf', 'dist-upgrade'] 0m19.7s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libboost-iostreams1.74.0 libboost-program-options1.74.0 libcifpp2 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libcifpp5 The following packages will be upgraded: bash cif-tools gcc-12-base hostname libc-bin libc6 libcifpp-data libgcc-s1 libp11-kit0 libstdc++6 libtinfo6 libzstd1 ncurses-base ncurses-bin tar 15 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 11.4 MB of archives. After this operation, 34.0 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bash amd64 5.2-2+b2 [1490 kB] Get:2 http://deb.debian.org/debian sid/main amd64 hostname amd64 3.23+nmu1 [10.5 kB] Get:3 http://deb.debian.org/debian sid/main amd64 ncurses-bin amd64 6.3+20221224-2 [421 kB] Get:4 http://deb.debian.org/debian sid/main amd64 tar amd64 1.34+dfsg-1.1 [836 kB] Get:5 http://deb.debian.org/debian sid/main amd64 gcc-12-base amd64 12.2.0-11 [37.3 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 12.2.0-11 [49.9 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 12.2.0-11 [614 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libc6 amd64 2.36-7 [2753 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libc-bin amd64 2.36-7 [605 kB] Get:10 http://deb.debian.org/debian sid/main amd64 ncurses-base all 6.3+20221224-2 [260 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libp11-kit0 amd64 0.24.1-2 [345 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libtinfo6 amd64 6.3+20221224-2 [330 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libzstd1 amd64 1.5.2+dfsg2-3 [284 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libcifpp-data all 5.0.5-4 [452 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libcifpp5 amd64 5.0.5-4 [795 kB] Get:16 http://deb.debian.org/debian sid/main amd64 cif-tools amd64 1.0.7-1 [2146 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 11.4 MB in 1s (9815 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../bash_5.2-2+b2_amd64.deb ... Unpacking bash (5.2-2+b2) over (5.2-2+b1) ... Setting up bash (5.2-2+b2) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.3+20221224-2_amd64.deb ... Unpacking ncurses-bin (6.3+20221224-2) over (6.3+20220423-2) ... Setting up ncurses-bin (6.3+20221224-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../tar_1.34+dfsg-1.1_amd64.deb ... Unpacking tar (1.34+dfsg-1.1) over (1.34+dfsg-1) ... Setting up tar (1.34+dfsg-1.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../gcc-12-base_12.2.0-11_amd64.deb ... Unpacking gcc-12-base:amd64 (12.2.0-11) over (12.2.0-10) ... Setting up gcc-12-base:amd64 (12.2.0-11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../libgcc-s1_12.2.0-11_amd64.deb ... Unpacking libgcc-s1:amd64 (12.2.0-11) over (12.2.0-10) ... Setting up libgcc-s1:amd64 (12.2.0-11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../libstdc++6_12.2.0-11_amd64.deb ... Unpacking libstdc++6:amd64 (12.2.0-11) over (12.2.0-10) ... Setting up libstdc++6:amd64 (12.2.0-11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../libc6_2.36-7_amd64.deb ... Unpacking libc6:amd64 (2.36-7) over (2.36-6) ... Setting up libc6:amd64 (2.36-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../libc-bin_2.36-7_amd64.deb ... Unpacking libc-bin (2.36-7) over (2.36-6) ... Setting up libc-bin (2.36-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.3+20221224-2_all.deb ... Unpacking ncurses-base (6.3+20221224-2) over (6.3+20220423-2) ... Setting up ncurses-base (6.3+20221224-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.24.1-2_amd64.deb ... Unpacking libp11-kit0:amd64 (0.24.1-2) over (0.24.1-1) ... Setting up libp11-kit0:amd64 (0.24.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.3+20221224-2_amd64.deb ... Unpacking libtinfo6:amd64 (6.3+20221224-2) over (6.3+20220423-2) ... Setting up libtinfo6:amd64 (6.3+20221224-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../libzstd1_1.5.2+dfsg2-3_amd64.deb ... Unpacking libzstd1:amd64 (1.5.2+dfsg2-3) over (1.5.2+dfsg-1) ... Setting up libzstd1:amd64 (1.5.2+dfsg2-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8681 files and directories currently installed.) Preparing to unpack .../libcifpp-data_5.0.5-4_all.deb ... Unpacking libcifpp-data (5.0.5-4) over (2.0.5-4) ... Selecting previously unselected package libcifpp5:amd64. Preparing to unpack .../libcifpp5_5.0.5-4_amd64.deb ... Unpacking libcifpp5:amd64 (5.0.5-4) ... Preparing to unpack .../cif-tools_1.0.7-1_amd64.deb ... Unpacking cif-tools (1.0.7-1) over (1.0.1b-1) ... Setting up libcifpp-data (5.0.5-4) ... Installing new version of config file /etc/cron.weekly/update-libcifpp-data ... /etc/cron.weekly/update-libcifpp-data: 5: [: Illegal number: Setting up libcifpp5:amd64 (5.0.5-4) ... Setting up cif-tools (1.0.7-1) ... Processing triggers for debianutils (5.7-0.4) ... Processing triggers for libc-bin (2.36-7) ... 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-yf', 'dist-upgrade'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m20.1s DUMP: 31c2a7b6621dea31a711d31296ee1b5d - 0m20.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m20.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'show', '--no-all-versions', 'cif-tools'] 0m20.3s DUMP: Package: cif-tools Version: 1.0.7-1 Installed-Size: 72614 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libcifpp5 (>= 5.0.5), libgcc-s1 (>= 3.0), libstdc++6 (>= 11), zlib1g (>= 1:1.2.2) Suggests: vim Description-en: Suite of tools to manipulate, validate and query mmCIF files This package contains a suite of tools for the manipulation of mmCIF files. . The structure of macro molecules is nowadays recorded in mmCIF files. Until recently however the ancient PDB file format was used by many programs but that format has since long been deprecated. . This package provides two tools, pdb2cif and cif2pdb, that can convert files from one format into the other, provided that data fits of course. . Other tools are cif-validate, cif-grep, cif-diff, cif-merge and mmCQL. The latter can be used to manipulate an mmCIF file as if it were a SQL like database using SELECT, UPDATE, INSERT and DELETE commands. . This package depends on libcifpp. Description-md5: e3592361fdf290a5f2e7276c35254eb2 Homepage: https://github.com/PDB-REDO/cif-tools Section: science Priority: optional Filename: pool/main/c/cif-tools/cif-tools_1.0.7-1_amd64.deb Size: 2145604 MD5sum: 39598d4aa9dc0c3d92548abb7d67457b SHA256: 610bc152638af8120bad453aa7fd65bfd697ff36e088506cae6eab9531b666e7 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'show', '--no-all-versions', 'cif-tools'] 0m20.3s INFO: apt-cache knows about the following packages: cif-tools 0m20.3s INFO: Running scripts pre_install 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_database-server'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_database-server'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_exceptions'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_exceptions'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_extras'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_extras'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy'] 0m20.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy'] 0m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy', 'cif-tools'] 0m20.4s DUMP: cif-tools: Installed: 1.0.7-1 Candidate: 1.0.7-1 Version table: *** 1.0.7-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy', 'cif-tools'] 0m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-y', 'install', 'cif-tools'] 0m20.9s DUMP: Reading package lists... Building dependency tree... Reading state information... cif-tools is already the newest version (1.0.7-1). The following packages were automatically installed and are no longer required: libboost-iostreams1.74.0 libboost-program-options1.74.0 libcifpp2 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m20.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-y', 'install', 'cif-tools'] 0m20.9s INFO: Running scripts post_install 0m20.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_install_exceptions'] 0m20.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_install_exceptions'] 0m20.9s INFO: Running scripts post_distupgrade 0m20.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m20.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m20.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_exceptions'] 0m20.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_exceptions'] 0m20.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m20.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m20.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m21.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m21.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_zz_backports'] 0m21.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_distupgrade_zz_backports'] 0m21.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m21.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m21.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m21.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m21.6s INFO: Running scripts pre_install 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_database-server'] 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_database-server'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_exceptions'] 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_exceptions'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_extras'] 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_extras'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture'] 0m21.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture'] 0m21.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m21.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m21.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy'] 0m21.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m21.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy'] 0m21.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy', 'cif-tools'] 0m21.8s DUMP: cif-tools: Installed: 1.0.7-1 Candidate: 1.0.7-1 Version table: *** 1.0.7-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-cache', 'policy', 'cif-tools'] 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-y', 'install', 'cif-tools=1.0.7-1'] 0m22.4s DUMP: Reading package lists... Building dependency tree... Reading state information... cif-tools is already the newest version (1.0.7-1). The following packages were automatically installed and are no longer required: libboost-iostreams1.74.0 libboost-program-options1.74.0 libcifpp2 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m22.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', '-y', 'install', 'cif-tools=1.0.7-1'] 0m22.4s INFO: Running scripts post_install 0m22.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_install_exceptions'] 0m22.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_install_exceptions'] 0m22.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m22.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m23.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', '-ac', '--ignore-obsolete'] 0m24.6s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', '-ac', '--ignore-obsolete'] 0m24.6s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m24.6s DUMP: 0.15.6 0m24.6s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m24.6s INFO: Running adequate version 0.15.6 now. 0m24.6s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'cif-tools'] 0m24.8s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'cif-tools'] 0m24.8s INFO: Running scripts pre_remove 0m24.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m24.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m24.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m24.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m24.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_exceptions'] 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/pre_remove_exceptions'] 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m25.6s DUMP: install ok installed apt apt 2.5.4 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2-2+b2 install ok installed bsdutils bsdutils 1:2.38.1-4 install ok installed cif-tools cif-tools 1.0.7-1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-9 install ok installed debconf debconf 1.5.80 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-3 install ok installed dpkg dpkg 1.21.13 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1+b1 install ok installed findutils findutils 4.9.0-3 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-11 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-2 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.4 install ok installed libattr1:amd64 libattr1 1:2.5.1-3 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libblkid1:amd64 libblkid1 2.38.1-4 install ok installed libboost-iostreams1.74.0:amd64 libboost-iostreams1.74.0 1.74.0-18.1 install ok installed libboost-program-options1.74.0:amd64 libboost-program-options1.74.0 1.74.0-18.1 install ok installed libboost-regex1.74.0:amd64 libboost-regex1.74.0 1.74.0-18.1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-7 install ok installed libc6:amd64 libc6 2.36-7 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.66-3 install ok installed libcifpp-data libcifpp-data 5.0.5-4 install ok installed libcifpp2:amd64 libcifpp2 2.0.5-4+b2 install ok installed libcifpp5:amd64 libcifpp5 5.0.5-4 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.265 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-3 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-11 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libicu72:amd64 libicu72 72.1-3 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.0-0.1 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-4 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-5 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-5 install ok installed libpam-runtime libpam-runtime 1.5.2-5 install ok installed libpam0g:amd64 libpam0g 1.5.2-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-3 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-6 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b4 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b4 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-4 install ok installed libss2:amd64 libss2 1.46.6~rc1-1+b1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-11 install ok installed libsystemd0:amd64 libsystemd0 252.4-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.3+20221224-2 install ok installed libudev1:amd64 libudev1 252.4-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-4 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg2-3 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1+b1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-4 install ok installed ncurses-base ncurses-base 6.3+20221224-2 install ok installed ncurses-bin ncurses-bin 6.3+20221224-2 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-6 install ok installed perl-base perl-base 5.36.0-6 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-6 install ok installed sed sed 4.8-1 install ok installed sysvinit-utils sysvinit-utils 3.06-2 install ok installed tar tar 1.34+dfsg-1.1 install ok installed tzdata tzdata 2022f-1 install ok installed usr-is-merged usr-is-merged 35 install ok installed usrmerge usrmerge 35 install ok installed util-linux util-linux 2.38.1-4 install ok installed util-linux-extra util-linux-extra 2.38.1-4 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', 'remove', 'libboost-iostreams1.74.0:amd64', 'libboost-program-options1.74.0:amd64', 'libboost-regex1.74.0:amd64', 'libcifpp-data', 'libcifpp2:amd64', 'libcifpp5:amd64', 'libicu72:amd64', 'cif-tools'] 0m26.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: cif-tools libboost-iostreams1.74.0 libboost-program-options1.74.0 libboost-regex1.74.0 libcifpp-data libcifpp2 libcifpp5 libicu72 0 upgraded, 0 newly installed, 8 to remove and 0 not upgraded. After this operation, 136 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8687 files and directories currently installed.) Removing cif-tools (1.0.7-1) ... Removing libcifpp2:amd64 (2.0.5-4+b2) ... Removing libboost-iostreams1.74.0:amd64 (1.74.0-18.1) ... Removing libboost-program-options1.74.0:amd64 (1.74.0-18.1) ... Removing libcifpp5:amd64 (5.0.5-4) ... Removing libboost-regex1.74.0:amd64 (1.74.0-18.1) ... Removing libcifpp-data (5.0.5-4) ... Removing libicu72:amd64 (72.1-3) ... Processing triggers for libc-bin (2.36-7) ... 0m26.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', 'remove', 'libboost-iostreams1.74.0:amd64', 'libboost-program-options1.74.0:amd64', 'libboost-regex1.74.0:amd64', 'libcifpp-data', 'libcifpp2:amd64', 'libcifpp5:amd64', 'libicu72:amd64', 'cif-tools'] 0m26.6s INFO: Running scripts post_remove 0m26.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_remove_exceptions'] 0m26.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_remove_exceptions'] 0m26.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg', '--purge', 'libboost-iostreams1.74.0:amd64', 'libboost-program-options1.74.0:amd64', 'libboost-regex1.74.0:amd64', 'libcifpp-data', 'libcifpp2:amd64', 'libcifpp5:amd64', 'libicu72:amd64'] 0m26.8s DUMP: dpkg: warning: ignoring request to remove libboost-iostreams1.74.0 which isn't installed dpkg: warning: ignoring request to remove libboost-program-options1.74.0 which isn't installed dpkg: warning: ignoring request to remove libboost-regex1.74.0 which isn't installed (Reading database ... 8607 files and directories currently installed.) Purging configuration files for libcifpp-data (5.0.5-4) ... dpkg: warning: ignoring request to remove libcifpp2 which isn't installed dpkg: warning: ignoring request to remove libcifpp5 which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed 0m26.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg', '--purge', 'libboost-iostreams1.74.0:amd64', 'libboost-program-options1.74.0:amd64', 'libboost-regex1.74.0:amd64', 'libcifpp-data', 'libcifpp2:amd64', 'libcifpp5:amd64', 'libicu72:amd64'] 0m26.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg', '--purge', 'cif-tools'] 0m26.8s DUMP: dpkg: warning: ignoring request to remove cif-tools which isn't installed 0m26.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg', '--purge', 'cif-tools'] 0m26.8s INFO: Running scripts post_purge 0m26.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_purge_exceptions'] 0m26.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_purge_exceptions'] 0m26.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg', '--purge', '--pending'] 0m26.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg', '--purge', '--pending'] 0m26.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg', '--remove', '--pending'] 0m26.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg', '--remove', '--pending'] 0m26.8s INFO: Running scripts post_test 0m26.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_test_exceptions'] 0m26.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'tmp/scripts/post_test_exceptions'] 0m26.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m27.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m27.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg-divert', '--list'] 0m27.2s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m27.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'dpkg-divert', '--list'] 0m27.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', 'clean'] 0m27.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpx1ev10se', 'apt-get', 'clean'] 0m27.2s DEBUG: Recording chroot state 0m28.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/shm'] 0m28.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/shm'] 0m28.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/console'] 0m28.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/console'] 0m28.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/ptmx'] 0m28.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/ptmx'] 0m28.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/pts'] 0m28.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/dev/pts'] 0m28.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/proc'] 0m28.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpx1ev10se/proc'] 0m28.3s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m28.4s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpx1ev10se'] 0m28.4s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpx1ev10se 0m28.4s INFO: PASS: Upgrading between Debian distributions. 0m28.4s INFO: PASS: All tests. 0m28.4s INFO: piuparts run ends. ret=0 End: 2022-12-30 15:31:02 GMT