Start: 2020-07-01 10:45:53 GMT [testing] Package: elph Version: 1.0.1-4 Installed-Size: 134 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.29), libstdc++6 (>= 5) Description: DNA/protein sequence motif finder Homepage: https://www.cbcb.umd.edu/software/ELPH/ Description-md5: ff2f4f2b8b80531a0fac9dff581a151d Section: science Priority: optional Filename: pool/main/e/elph/elph_1.0.1-4_amd64.deb Size: 52180 MD5sum: 2a96971a7ac48f0751683a2cfab93016 SHA256: deeeb3338334697418b0c4279d2e045b3776ee564820ac966eaff41721bc2db6 [sid] Package: elph Version: 1.0.1-5 Installed-Size: 134 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.29), libstdc++6 (>= 5) Description: DNA/protein sequence motif finder Homepage: https://www.cbcb.umd.edu/software/ELPH/ Description-md5: ff2f4f2b8b80531a0fac9dff581a151d Section: science Priority: optional Filename: pool/main/e/elph/elph_1.0.1-5_amd64.deb Size: 52320 MD5sum: f6f500992149ee499223cbf9c544779a SHA256: 4e379acbbd5f621e93c6c7ab1d5cd8929d8ad0965cb846f6fd6f2527301aa7d2 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt elph=1.0.1-5 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.2~202004292056~1.1.1-20-gd7155993 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt elph=1.0.1-5 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpiokuvpem 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpiokuvpem 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz'] 0m1.6s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/proc'] 0m1.7s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/proc'] 0m1.7s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/pts'] 0m1.7s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/pts'] 0m1.7s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/ptmx'] 0m1.7s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/ptmx'] 0m1.7s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/console'] 0m1.7s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/console'] 0m1.7s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/shm'] 0m1.7s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/shm'] 0m1.7s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m1.7s DEBUG: Created policy-rc.d and chmodded it. 0m1.7s DEBUG: Created resolv.conf. 0m1.7s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpiokuvpem/tmp/scripts/ 0m1.7s INFO: Running scripts post_chroot_unpack 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', 'update'] 0m5.3s DUMP: Get:1 http://deb.debian.org/debian bullseye InRelease [116 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 Packages [7725 kB] Get:3 http://deb.debian.org/debian bullseye/main Translation-en [5918 kB] Fetched 13.8 MB in 3s (4741 kB/s) Reading package lists... 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', 'update'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-yf', 'dist-upgrade'] 0m6.3s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: gcc-10-base libgcc-s1 libstdc++6 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 731 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 gcc-10-base amd64 10.1.0-4 [197 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 libstdc++6 amd64 10.1.0-4 [492 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 libgcc-s1 amd64 10.1.0-4 [41.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 731 kB in 0s (12.8 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6514 files and directories currently installed.) Preparing to unpack .../gcc-10-base_10.1.0-4_amd64.deb ... Unpacking gcc-10-base:amd64 (10.1.0-4) over (10.1.0-3) ... Setting up gcc-10-base:amd64 (10.1.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6514 files and directories currently installed.) Preparing to unpack .../libstdc++6_10.1.0-4_amd64.deb ... Unpacking libstdc++6:amd64 (10.1.0-4) over (10.1.0-3) ... Setting up libstdc++6:amd64 (10.1.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6514 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10.1.0-4_amd64.deb ... Unpacking libgcc-s1:amd64 (10.1.0-4) over (10.1.0-3) ... Setting up libgcc-s1:amd64 (10.1.0-4) ... Processing triggers for libc-bin (2.30-8) ... 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-yf', 'dist-upgrade'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.7s DUMP: 5ef40ec73f1e704fa0e107612f1ffe04 - 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.7s INFO: Running scripts post_setup 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_dummy_users'] 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_dummy_users'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_forbid_home'] 0m8.0s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_forbid_home'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.1s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_minimize'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_minimize'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_zz_backports'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_setup_zz_backports'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.1s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 2.1.6 install ok installed base-files base-files 11 install ok installed base-passwd base-passwd 3.5.47 install ok installed bash bash 5.0-6 install ok installed bsdutils bsdutils 1:2.35.2-4 install ok installed coreutils coreutils 8.30-3+b1 install ok installed dash dash 0.5.10.2-7 install ok installed debconf debconf 1.5.74 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.9.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.7 install ok installed e2fsprogs e2fsprogs 1.45.6-1 install ok installed findutils findutils 4.7.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.1.0-4 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-14 install ok installed gpgv gpgv 2.2.20-1 install ok installed grep grep 3.4-1 install ok installed gzip gzip 1.10-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.57 install ok installed libacl1:amd64 libacl1 2.2.53-8 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.1.6 install ok installed libattr1:amd64 libattr1 1:2.4.48-5 install ok installed libaudit-common libaudit-common 1:2.8.5-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.5-3+b1 install ok installed libblkid1:amd64 libblkid1 2.35.2-4 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-3 install ok installed libc-bin libc-bin 2.30-8 install ok installed libc6:amd64 libc6 2.30-8 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2 install ok installed libcom-err2:amd64 libcom-err2 1.45.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.16-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.6 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.252 install ok installed libext2fs2:amd64 libext2fs2 1.45.6-1 install ok installed libffi7:amd64 libffi7 3.3-4 install ok installed libgcc-s1:amd64 libgcc-s1 10.1.0-4 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.5-5 install ok installed libgmp10:amd64 libgmp10 2:6.2.0+dfsg-6 install ok installed libgnutls30:amd64 libgnutls30 3.6.14-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-1 install ok installed libhogweed5:amd64 libhogweed5 3.5.1+really3.5.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.2-2 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+b1 install ok installed libmount1:amd64 libmount1 2.35.2-4 install ok installed libnettle7:amd64 libnettle7 3.5.1+really3.5.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.20-1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.34-7 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.4.3-1+b1 install ok installed libselinux1:amd64 libselinux1 3.0-1+b3 install ok installed libsemanage-common libsemanage-common 3.0-1 install ok installed libsemanage1:amd64 libsemanage1 3.0-1+b3 install ok installed libsepol1:amd64 libsepol1 3.0-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.35.2-4 install ok installed libss2:amd64 libss2 1.45.6-1 install ok installed libstdc++6:amd64 libstdc++6 10.1.0-4 install ok installed libsystemd0:amd64 libsystemd0 245.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.2-1 install ok installed libudev1:amd64 libudev1 245.6-1 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.35.2-4 install ok installed libzstd1:amd64 libzstd1 1.4.5+dfsg-2 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.45.6-1 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.35.2-4 install ok installed ncurses-base ncurses-base 6.2-1 install ok installed ncurses-bin ncurses-bin 6.2-1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.30.3-4 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-3 install ok installed tar tar 1.30+dfsg-7 install ok installed tzdata tzdata 2020a-1 install ok installed util-linux util-linux 2.35.2-4 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.1s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m8.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m8.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m8.4s INFO: Running scripts is_testable 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/is_testable_uninstallable'] 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/is_testable_uninstallable'] 0m8.4s INFO: Running scripts pre_test 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_test_exceptions'] 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_test_exceptions'] 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_test_root_password'] 0m8.4s DUMP: New password: Retype new password: passwd: password updated successfully 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_test_root_password'] 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'show', '--no-all-versions', 'elph'] 0m8.6s DUMP: Package: elph Version: 1.0.1-4 Installed-Size: 134 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.29), libstdc++6 (>= 5) Description-en: DNA/protein sequence motif finder ELPH (Estimated Locations of Pattern Hits) is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing anywhere from a few dozen to thousands of sequences, and searches through them for the most common motif, assuming that each sequence contains one copy of the motif. ELPH was used to find patterns such as ribosome binding sites (RBSs) and exon splicing enhancers (ESEs). Description-md5: ff2f4f2b8b80531a0fac9dff581a151d Homepage: https://www.cbcb.umd.edu/software/ELPH/ Section: science Priority: optional Filename: pool/main/e/elph/elph_1.0.1-4_amd64.deb Size: 52180 MD5sum: 2a96971a7ac48f0751683a2cfab93016 SHA256: deeeb3338334697418b0c4279d2e045b3776ee564820ac966eaff41721bc2db6 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'show', '--no-all-versions', 'elph'] 0m8.6s INFO: apt-cache knows about the following packages: elph 0m8.6s INFO: Running scripts pre_install 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_database-server'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_database-server'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_exceptions'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_exceptions'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_extras'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_extras'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy'] 0m8.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release o=Debian,a=testing,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy', 'elph'] 0m8.8s DUMP: elph: Installed: (none) Candidate: 1.0.1-4 Version table: 1.0.1-4 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy', 'elph'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-y', 'install', 'elph'] 0m9.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: elph 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 52.2 kB of archives. After this operation, 137 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 elph amd64 1.0.1-4 [52.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 52.2 kB in 0s (1040 kB/s) Selecting previously unselected package elph. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6516 files and directories currently installed.) Preparing to unpack .../elph_1.0.1-4_amd64.deb ... Unpacking elph (1.0.1-4) ... Setting up elph (1.0.1-4) ... 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-y', 'install', 'elph'] 0m9.6s INFO: Running scripts post_install 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_install_exceptions'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_install_exceptions'] 0m9.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m9.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m9.9s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpiokuvpem to sid 0m9.9s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m9.9s INFO: Running scripts pre_distupgrade 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_exceptions'] 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_exceptions'] 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', 'update'] 0m14.1s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [146 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [8259 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6223 kB] Fetched 14.6 MB in 3s (4299 kB/s) Reading package lists... 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', 'update'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-yf', 'dist-upgrade'] 0m16.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: dmsetup libargon2-1 libcryptsetup12 libdevmapper1.02.1 libjson-c4 libssl1.1 The following packages will be upgraded: bsdutils coreutils debianutils dpkg elph libblkid1 libmount1 libsmartcols1 libuuid1 libzstd1 mount util-linux 12 upgraded, 6 newly installed, 0 to remove and 0 not upgraded. Need to get 9768 kB of archives. After this operation, 7210 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.35.2-6 [146 kB] Get:2 http://deb.debian.org/debian sid/main amd64 coreutils amd64 8.32-2 [2837 kB] Get:3 http://deb.debian.org/debian sid/main amd64 debianutils amd64 4.11 [101 kB] Get:4 http://deb.debian.org/debian sid/main amd64 dpkg amd64 1.20.3 [2302 kB] Get:5 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.35.2-6 [1113 kB] Get:6 http://deb.debian.org/debian sid/main amd64 mount amd64 2.35.2-6 [181 kB] Get:7 http://deb.debian.org/debian sid/main amd64 dmsetup amd64 2:1.02.167-1+b1 [91.3 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libdevmapper1.02.1 amd64 2:1.02.167-1+b1 [142 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libargon2-1 amd64 0~20171227-0.2 [19.6 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.35.2-6 [192 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libjson-c4 amd64 0.13.1+dfsg-9 [37.1 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.35.2-6 [81.4 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libcryptsetup12 amd64 2:2.3.3-1 [239 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.35.2-6 [211 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.35.2-6 [156 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libzstd1 amd64 1.4.5+dfsg-3 [323 kB] Get:18 http://deb.debian.org/debian sid/main amd64 elph amd64 1.0.1-5 [52.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9768 kB in 0s (24.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6525 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.35.2-6_amd64.deb ... Unpacking bsdutils (1:2.35.2-6) over (1:2.35.2-4) ... Setting up bsdutils (1:2.35.2-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6525 files and directories currently installed.) Preparing to unpack .../coreutils_8.32-2_amd64.deb ... Unpacking coreutils (8.32-2) over (8.30-3+b1) ... Setting up coreutils (8.32-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6613 files and directories currently installed.) Preparing to unpack .../debianutils_4.11_amd64.deb ... Unpacking debianutils (4.11) over (4.9.1) ... Setting up debianutils (4.11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6613 files and directories currently installed.) Preparing to unpack .../archives/dpkg_1.20.3_amd64.deb ... Unpacking dpkg (1.20.3) over (1.19.7) ... Setting up dpkg (1.20.3) ... Installing new version of config file /etc/cron.daily/dpkg ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6622 files and directories currently installed.) Preparing to unpack .../util-linux_2.35.2-6_amd64.deb ... Unpacking util-linux (2.35.2-6) over (2.35.2-4) ... Setting up util-linux (2.35.2-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6622 files and directories currently installed.) Preparing to unpack .../mount_2.35.2-6_amd64.deb ... Unpacking mount (2.35.2-6) over (2.35.2-4) ... Selecting previously unselected package dmsetup. Preparing to unpack .../dmsetup_2%3a1.02.167-1+b1_amd64.deb ... Unpacking dmsetup (2:1.02.167-1+b1) ... Selecting previously unselected package libdevmapper1.02.1:amd64. Preparing to unpack .../libdevmapper1.02.1_2%3a1.02.167-1+b1_amd64.deb ... Unpacking libdevmapper1.02.1:amd64 (2:1.02.167-1+b1) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.167-1+b1) ... Setting up dmsetup (2:1.02.167-1+b1) ... Selecting previously unselected package libargon2-1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6645 files and directories currently installed.) Preparing to unpack .../libargon2-1_0~20171227-0.2_amd64.deb ... Unpacking libargon2-1:amd64 (0~20171227-0.2) ... Setting up libargon2-1:amd64 (0~20171227-0.2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6650 files and directories currently installed.) Preparing to unpack .../libblkid1_2.35.2-6_amd64.deb ... Unpacking libblkid1:amd64 (2.35.2-6) over (2.35.2-4) ... Setting up libblkid1:amd64 (2.35.2-6) ... Selecting previously unselected package libjson-c4:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6650 files and directories currently installed.) Preparing to unpack .../libjson-c4_0.13.1+dfsg-9_amd64.deb ... Unpacking libjson-c4:amd64 (0.13.1+dfsg-9) ... Setting up libjson-c4:amd64 (0.13.1+dfsg-9) ... Selecting previously unselected package libssl1.1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6658 files and directories currently installed.) Preparing to unpack .../libssl1.1_1.1.1g-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1g-1) ... Setting up libssl1.1:amd64 (1.1.1g-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6669 files and directories currently installed.) Preparing to unpack .../libuuid1_2.35.2-6_amd64.deb ... Unpacking libuuid1:amd64 (2.35.2-6) over (2.35.2-4) ... Setting up libuuid1:amd64 (2.35.2-6) ... Selecting previously unselected package libcryptsetup12:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6669 files and directories currently installed.) Preparing to unpack .../libcryptsetup12_2%3a2.3.3-1_amd64.deb ... Unpacking libcryptsetup12:amd64 (2:2.3.3-1) ... Setting up libcryptsetup12:amd64 (2:2.3.3-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6676 files and directories currently installed.) Preparing to unpack .../libmount1_2.35.2-6_amd64.deb ... Unpacking libmount1:amd64 (2.35.2-6) over (2.35.2-4) ... Setting up libmount1:amd64 (2.35.2-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6676 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.35.2-6_amd64.deb ... Unpacking libsmartcols1:amd64 (2.35.2-6) over (2.35.2-4) ... Setting up libsmartcols1:amd64 (2.35.2-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6676 files and directories currently installed.) Preparing to unpack .../libzstd1_1.4.5+dfsg-3_amd64.deb ... Unpacking libzstd1:amd64 (1.4.5+dfsg-3) over (1.4.5+dfsg-2) ... Setting up libzstd1:amd64 (1.4.5+dfsg-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6676 files and directories currently installed.) Preparing to unpack .../elph_1.0.1-5_amd64.deb ... Unpacking elph (1.0.1-5) over (1.0.1-4) ... Setting up mount (2.35.2-6) ... Setting up elph (1.0.1-5) ... Processing triggers for libc-bin (2.30-8) ... 0m16.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-yf', 'dist-upgrade'] 0m16.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m17.0s DUMP: 32435879115e3861cc5a0b89360e6e8e - 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m17.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'show', '--no-all-versions', 'elph'] 0m17.3s DUMP: Package: elph Version: 1.0.1-5 Installed-Size: 134 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.29), libstdc++6 (>= 5) Description-en: DNA/protein sequence motif finder ELPH (Estimated Locations of Pattern Hits) is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing anywhere from a few dozen to thousands of sequences, and searches through them for the most common motif, assuming that each sequence contains one copy of the motif. ELPH was used to find patterns such as ribosome binding sites (RBSs) and exon splicing enhancers (ESEs). Description-md5: ff2f4f2b8b80531a0fac9dff581a151d Homepage: https://www.cbcb.umd.edu/software/ELPH/ Section: science Priority: optional Filename: pool/main/e/elph/elph_1.0.1-5_amd64.deb Size: 52320 MD5sum: f6f500992149ee499223cbf9c544779a SHA256: 4e379acbbd5f621e93c6c7ab1d5cd8929d8ad0965cb846f6fd6f2527301aa7d2 0m17.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'show', '--no-all-versions', 'elph'] 0m17.3s INFO: apt-cache knows about the following packages: elph 0m17.3s INFO: Running scripts pre_install 0m17.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_database-server'] 0m17.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_database-server'] 0m17.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_exceptions'] 0m17.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_exceptions'] 0m17.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_extras'] 0m17.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_extras'] 0m17.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture'] 0m17.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture'] 0m17.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m17.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m17.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy'] 0m17.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy'] 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy', 'elph'] 0m17.4s DUMP: elph: Installed: 1.0.1-5 Candidate: 1.0.1-5 Version table: *** 1.0.1-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy', 'elph'] 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-y', 'install', 'elph'] 0m17.8s DUMP: Reading package lists... Building dependency tree... Reading state information... elph is already the newest version (1.0.1-5). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-y', 'install', 'elph'] 0m17.8s INFO: Running scripts post_install 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_install_exceptions'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_install_exceptions'] 0m17.8s INFO: Running scripts post_distupgrade 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_exceptions'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_exceptions'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_zz_backports'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_distupgrade_zz_backports'] 0m17.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m18.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m18.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m18.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m18.5s INFO: Running scripts pre_install 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_database-server'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_database-server'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_exceptions'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_exceptions'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_extras'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_extras'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy'] 0m18.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy', 'elph'] 0m18.6s DUMP: elph: Installed: 1.0.1-5 Candidate: 1.0.1-5 Version table: *** 1.0.1-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m18.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-cache', 'policy', 'elph'] 0m18.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-y', 'install', 'elph=1.0.1-5'] 0m19.0s DUMP: Reading package lists... Building dependency tree... Reading state information... elph is already the newest version (1.0.1-5). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m19.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', '-y', 'install', 'elph=1.0.1-5'] 0m19.0s INFO: Running scripts post_install 0m19.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_install_exceptions'] 0m19.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_install_exceptions'] 0m19.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m19.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m19.5s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', '-ac', '--ignore-obsolete'] 0m20.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', '-ac', '--ignore-obsolete'] 0m20.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m20.3s DUMP: 0.15.2 0m20.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m20.3s INFO: Running adequate version 0.15.2 now. 0m20.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'elph'] 0m20.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'elph'] 0m20.4s INFO: Running scripts pre_remove 0m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m20.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m20.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m20.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m20.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m20.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m20.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m20.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m20.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_exceptions'] 0m21.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/pre_remove_exceptions'] 0m21.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m21.0s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 2.1.6 install ok installed base-files base-files 11 install ok installed base-passwd base-passwd 3.5.47 install ok installed bash bash 5.0-6 install ok installed bsdutils bsdutils 1:2.35.2-6 install ok installed coreutils coreutils 8.32-2 install ok installed dash dash 0.5.10.2-7 install ok installed debconf debconf 1.5.74 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.11 install ok installed diffutils diffutils 1:3.7-3 install ok installed dmsetup dmsetup 2:1.02.167-1+b1 install ok installed dpkg dpkg 1.20.3 install ok installed e2fsprogs e2fsprogs 1.45.6-1 install ok installed elph elph 1.0.1-5 install ok installed findutils findutils 4.7.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.1.0-4 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-14 install ok installed gpgv gpgv 2.2.20-1 install ok installed grep grep 3.4-1 install ok installed gzip gzip 1.10-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.57 install ok installed libacl1:amd64 libacl1 2.2.53-8 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.1.6 install ok installed libargon2-1:amd64 libargon2-1 0~20171227-0.2 install ok installed libattr1:amd64 libattr1 1:2.4.48-5 install ok installed libaudit-common libaudit-common 1:2.8.5-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.5-3+b1 install ok installed libblkid1:amd64 libblkid1 2.35.2-6 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-3 install ok installed libc-bin libc-bin 2.30-8 install ok installed libc6:amd64 libc6 2.30-8 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2 install ok installed libcom-err2:amd64 libcom-err2 1.45.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.16-1 install ok installed libcryptsetup12:amd64 libcryptsetup12 2:2.3.3-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.6 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.252 install ok installed libdevmapper1.02.1:amd64 libdevmapper1.02.1 2:1.02.167-1+b1 install ok installed libext2fs2:amd64 libext2fs2 1.45.6-1 install ok installed libffi7:amd64 libffi7 3.3-4 install ok installed libgcc-s1:amd64 libgcc-s1 10.1.0-4 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.5-5 install ok installed libgmp10:amd64 libgmp10 2:6.2.0+dfsg-6 install ok installed libgnutls30:amd64 libgnutls30 3.6.14-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-1 install ok installed libhogweed5:amd64 libhogweed5 3.5.1+really3.5.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-1 install ok installed libjson-c4:amd64 libjson-c4 0.13.1+dfsg-9 install ok installed liblz4-1:amd64 liblz4-1 1.9.2-2 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+b1 install ok installed libmount1:amd64 libmount1 2.35.2-6 install ok installed libnettle7:amd64 libnettle7 3.5.1+really3.5.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.20-1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.34-7 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.4.3-1+b1 install ok installed libselinux1:amd64 libselinux1 3.0-1+b3 install ok installed libsemanage-common libsemanage-common 3.0-1 install ok installed libsemanage1:amd64 libsemanage1 3.0-1+b3 install ok installed libsepol1:amd64 libsepol1 3.0-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.35.2-6 install ok installed libss2:amd64 libss2 1.45.6-1 install ok installed libssl1.1:amd64 libssl1.1 1.1.1g-1 install ok installed libstdc++6:amd64 libstdc++6 10.1.0-4 install ok installed libsystemd0:amd64 libsystemd0 245.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.2-1 install ok installed libudev1:amd64 libudev1 245.6-1 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.35.2-6 install ok installed libzstd1:amd64 libzstd1 1.4.5+dfsg-3 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.45.6-1 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.35.2-6 install ok installed ncurses-base ncurses-base 6.2-1 install ok installed ncurses-bin ncurses-bin 6.2-1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.30.3-4 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-3 install ok installed tar tar 1.30+dfsg-7 install ok installed tzdata tzdata 2020a-1 install ok installed util-linux util-linux 2.35.2-6 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2 0m21.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m21.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', 'remove', 'elph'] 0m21.7s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: elph 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. After this operation, 137 kB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6676 files and directories currently installed.) Removing elph (1.0.1-5) ... 0m21.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', 'remove', 'elph'] 0m21.7s INFO: Running scripts post_remove 0m21.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_remove_exceptions'] 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_remove_exceptions'] 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg', '--purge', 'elph'] 0m21.8s DUMP: dpkg: warning: ignoring request to remove elph which isn't installed 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg', '--purge', 'elph'] 0m21.8s INFO: Running scripts post_purge 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_purge_exceptions'] 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_purge_exceptions'] 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg', '--purge', '--pending'] 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg', '--purge', '--pending'] 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg', '--remove', '--pending'] 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg', '--remove', '--pending'] 0m21.8s INFO: Running scripts post_test 0m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_test_exceptions'] 0m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'tmp/scripts/post_test_exceptions'] 0m21.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m22.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m22.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg-divert', '--list'] 0m22.1s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m22.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'dpkg-divert', '--list'] 0m22.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', 'clean'] 0m22.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiokuvpem', 'apt-get', 'clean'] 0m22.1s DEBUG: Recording chroot state 0m22.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/shm'] 0m23.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/shm'] 0m23.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/console'] 0m23.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/console'] 0m23.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/ptmx'] 0m23.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/ptmx'] 0m23.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/pts'] 0m23.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/dev/pts'] 0m23.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/proc'] 0m23.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiokuvpem/proc'] 0m23.1s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m23.2s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpiokuvpem'] 0m23.2s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpiokuvpem 0m23.2s INFO: PASS: Upgrading between Debian distributions. 0m23.2s INFO: PASS: All tests. 0m23.2s INFO: piuparts run ends. ret=0 End: 2020-07-01 10:46:16 GMT