Start: 2022-11-18 15:30:06 GMT [testing] Package: grabix Source: grabix (0.1.7-3) Version: 0.1.7-3+b1 Installed-Size: 57 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0), tabix Description: wee tool for random access into BGZF files Homepage: https://github.com/arq5x/grabix Description-md5: 0eef255501daa10dd72d7e36a6dc23b6 Section: science Priority: optional Filename: pool/main/g/grabix/grabix_0.1.7-3+b1_amd64.deb Size: 15212 MD5sum: 53effc53a06bcc17f6d2a982792248fc SHA256: a20395a7ed930a2e442dea14112144374fe60bb17d9afe9a17c5723374917898 [sid] Package: grabix Version: 0.1.7-4 Installed-Size: 56 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0), tabix Description: wee tool for random access into BGZF files Homepage: https://github.com/arq5x/grabix Description-md5: 0eef255501daa10dd72d7e36a6dc23b6 Section: science Priority: optional Filename: pool/main/g/grabix/grabix_0.1.7-4_amd64.deb Size: 14772 MD5sum: 50f91fe37a93a33ec886cfd4e685e81f SHA256: 08c61033c3e75394cd2fcdd0e92a21b96b8cf79e2fc84c3aaff5accd090bc364 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt grabix=0.1.7-4 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt grabix=0.1.7-4 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-19-amd64 #1 SMP Debian 5.10.149-2 (2022-10-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp652zdt7o 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp652zdt7o 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m1.9s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/proc'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/proc'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/pts'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/pts'] 0m1.9s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/ptmx'] 0m2.0s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/ptmx'] 0m2.0s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/console'] 0m2.0s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/console'] 0m2.0s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/shm'] 0m2.0s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/shm'] 0m2.0s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m2.0s DEBUG: Created policy-rc.d and chmodded it. 0m2.0s DEBUG: Created resolv.conf. 0m2.0s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp652zdt7o/tmp/scripts/ 0m2.0s INFO: Running scripts post_chroot_unpack 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', 'update'] 0m5.0s DUMP: Get:1 http://deb.debian.org/debian bookworm InRelease [164 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 Packages [8751 kB] Get:3 http://deb.debian.org/debian bookworm/main Translation-en [5915 kB] Fetched 14.8 MB in 2s (7395 kB/s) Reading package lists... 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', 'update'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-yf', 'dist-upgrade'] 0m7.1s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: libc-bin libc6 login passwd 4 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4940 kB of archives. After this operation, 145 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 login amd64 1:4.13+dfsg1-1 [616 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libc6 amd64 2.36-5 [2749 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libc-bin amd64 2.36-5 [604 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 passwd amd64 1:4.13+dfsg1-1 [972 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4940 kB in 0s (65.3 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8604 files and directories currently installed.) Preparing to unpack .../login_1%3a4.13+dfsg1-1_amd64.deb ... Unpacking login (1:4.13+dfsg1-1) over (1:4.12.3+dfsg1-3) ... Setting up login (1:4.13+dfsg1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8605 files and directories currently installed.) Preparing to unpack .../libc6_2.36-5_amd64.deb ... Unpacking libc6:amd64 (2.36-5) over (2.36-4) ... Setting up libc6:amd64 (2.36-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8605 files and directories currently installed.) Preparing to unpack .../libc-bin_2.36-5_amd64.deb ... Unpacking libc-bin (2.36-5) over (2.36-4) ... Setting up libc-bin (2.36-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8605 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.13+dfsg1-1_amd64.deb ... Unpacking passwd (1:4.13+dfsg1-1) over (1:4.12.3+dfsg1-3) ... Setting up passwd (1:4.13+dfsg1-1) ... 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-yf', 'dist-upgrade'] 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.5s DUMP: e7326e7a86816e19c7e08f89b9928273 - 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.5s INFO: Running scripts post_setup 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_dummy_users'] 0m8.0s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_dummy_users'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_forbid_home'] 0m8.1s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_forbid_home'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.1s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_minimize'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_minimize'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_zz_backports'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_setup_zz_backports'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.1s DUMP: install ok installed apt apt 2.5.4 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2-2+b1 install ok installed bsdutils bsdutils 1:2.38.1-1.1+b1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-9 install ok installed debconf debconf 1.5.79 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-1 install ok installed dpkg dpkg 1.21.9+b1 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1+b1 install ok installed findutils findutils 4.9.0-3 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-9 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.4 install ok installed libattr1:amd64 libattr1 1:2.5.1-1 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libblkid1:amd64 libblkid1 2.38.1-1.1+b1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-5 install ok installed libc6:amd64 libc6 2.36-5 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.44-1 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.30-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.264 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-2 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-9 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-2 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.45-2 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.2.7-0.1 install ok installed libmount1:amd64 libmount1 2.38.1-1.1+b1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-5 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-5 install ok installed libpam-runtime libpam-runtime 1.5.2-5 install ok installed libpam0g:amd64 libpam0g 1.5.2-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-2 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b3 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b3 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-1.1+b1 install ok installed libss2:amd64 libss2 1.46.6~rc1-1+b1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-9 install ok installed libsystemd0:amd64 libsystemd0 252.1-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.3+20220423-2 install ok installed libudev1:amd64 libudev1 252.1-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-1.1+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg-1 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1+b1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-1.1+b1 install ok installed ncurses-base ncurses-base 6.3+20220423-2 install ok installed ncurses-bin ncurses-bin 6.3+20220423-2 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-4 install ok installed perl-base perl-base 5.36.0-4 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-4 install ok installed sed sed 4.8-1 install ok installed sysvinit-utils sysvinit-utils 3.05-6 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2022f-1 install ok installed usr-is-merged usr-is-merged 33 install ok installed usrmerge usrmerge 33 install ok installed util-linux util-linux 2.38.1-1.1+b1 install ok installed util-linux-extra util-linux-extra 2.38.1-1.1+b1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-4.1 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.1s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m8.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m8.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m8.5s INFO: Running scripts is_testable 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/is_testable_uninstallable'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/is_testable_uninstallable'] 0m8.5s INFO: Running scripts pre_test 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_test_exceptions'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_test_exceptions'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_test_root_password'] 0m8.6s DUMP: New password: Retype new password: passwd: password updated successfully 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_test_root_password'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'show', '--no-all-versions', 'grabix'] 0m8.8s DUMP: Package: grabix Source: grabix (0.1.7-3) Version: 0.1.7-3+b1 Installed-Size: 57 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0), tabix Description-en: wee tool for random access into BGZF files In biomedical research it is increasing practice to study the genetic basis of disease. This now frequently comprises the sequencing of human sequences. The output of the machine however is redundant, and the real sequence is the best sequence to explain the redundancy. The exchange of data happens only with compressed files - to huge and redundant to perform otherwise. One should avoid uncompression whenever possible. . grabix leverages the fantastic BGZF library of the samtools package to provide random access into text files that have been compressed with bgzip. grabix creates it's own index (.gbi) of the bgzipped file. Once indexed, one can extract arbitrary lines from the file with the grab command. Or choose random lines with the, well, random command. Description-md5: 0eef255501daa10dd72d7e36a6dc23b6 Homepage: https://github.com/arq5x/grabix Section: science Priority: optional Filename: pool/main/g/grabix/grabix_0.1.7-3+b1_amd64.deb Size: 15212 MD5sum: 53effc53a06bcc17f6d2a982792248fc SHA256: a20395a7ed930a2e442dea14112144374fe60bb17d9afe9a17c5723374917898 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'show', '--no-all-versions', 'grabix'] 0m8.8s INFO: apt-cache knows about the following packages: grabix 0m8.8s INFO: Running scripts pre_install 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_database-server'] 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_database-server'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_exceptions'] 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_exceptions'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_extras'] 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_extras'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy'] 0m8.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release o=Debian,a=testing,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy', 'grabix'] 0m8.9s DUMP: grabix: Installed: (none) Candidate: 0.1.7-3+b1 Version table: 0.1.7-3+b1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy', 'grabix'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-y', 'install', 'grabix'] 0m9.7s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libdeflate0 libhtscodecs2 tabix The following NEW packages will be installed: grabix libdeflate0 libhtscodecs2 tabix 0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 621 kB of archives. After this operation, 2682 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libhtscodecs2 amd64 1.3.0-4 [87.5 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 tabix amd64 1.16+ds-3 [457 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 grabix amd64 0.1.7-3+b1 [15.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 621 kB in 0s (14.2 MB/s) Selecting previously unselected package libdeflate0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8607 files and directories currently installed.) Preparing to unpack .../libdeflate0_1.14-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.14-1) ... Selecting previously unselected package libhtscodecs2:amd64. Preparing to unpack .../libhtscodecs2_1.3.0-4_amd64.deb ... Unpacking libhtscodecs2:amd64 (1.3.0-4) ... Selecting previously unselected package tabix. Preparing to unpack .../tabix_1.16+ds-3_amd64.deb ... Unpacking tabix (1.16+ds-3) ... Selecting previously unselected package grabix. Preparing to unpack .../grabix_0.1.7-3+b1_amd64.deb ... Unpacking grabix (0.1.7-3+b1) ... Setting up libhtscodecs2:amd64 (1.3.0-4) ... Setting up libdeflate0:amd64 (1.14-1) ... Setting up tabix (1.16+ds-3) ... Setting up grabix (0.1.7-3+b1) ... Processing triggers for libc-bin (2.36-5) ... 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-y', 'install', 'grabix'] 0m9.7s INFO: Running scripts post_install 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_install_exceptions'] 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_install_exceptions'] 0m9.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m10.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m10.1s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp652zdt7o to sid 0m10.1s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m10.1s INFO: Running scripts pre_distupgrade 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_exceptions'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_exceptions'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', 'update'] 0m13.4s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [161 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9393 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6941 kB] Fetched 16.5 MB in 3s (6388 kB/s) Reading package lists... 0m13.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', 'update'] 0m13.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-yf', 'dist-upgrade'] 0m14.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: bsdutils grabix libblkid1 libgpg-error0 libmount1 libsmartcols1 libuuid1 mount sysvinit-utils util-linux util-linux-extra zlib1g 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2169 kB of archives. After this operation, 11.3 kB disk space will be freed. Get:1 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.38.1-2 [93.3 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.38.1-2 [106 kB] Get:3 http://deb.debian.org/debian sid/main amd64 util-linux-extra amd64 2.38.1-2 [110 kB] Get:4 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.38.1-2 [1176 kB] Get:5 http://deb.debian.org/debian sid/main amd64 sysvinit-utils amd64 3.05-7 [30.4 kB] Get:6 http://deb.debian.org/debian sid/main amd64 mount amd64 2.38.1-2 [134 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.38.1-2 [147 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libgpg-error0 amd64 1.46-1 [76.9 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.38.1-2 [165 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.38.1-2 [28.2 kB] Get:11 http://deb.debian.org/debian sid/main amd64 zlib1g amd64 1:1.2.13.dfsg-1 [86.7 kB] Get:12 http://deb.debian.org/debian sid/main amd64 grabix amd64 0.1.7-4 [14.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2169 kB in 0s (23.2 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8642 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.38.1-2_amd64.deb ... Unpacking bsdutils (1:2.38.1-2) over (1:2.38.1-1.1+b1) ... Setting up bsdutils (1:2.38.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8641 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.38.1-2_amd64.deb ... Unpacking libsmartcols1:amd64 (2.38.1-2) over (2.38.1-1.1+b1) ... Setting up libsmartcols1:amd64 (2.38.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8640 files and directories currently installed.) Preparing to unpack .../util-linux-extra_2.38.1-2_amd64.deb ... Unpacking util-linux-extra (2.38.1-2) over (2.38.1-1.1+b1) ... Setting up util-linux-extra (2.38.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8639 files and directories currently installed.) Preparing to unpack .../util-linux_2.38.1-2_amd64.deb ... Unpacking util-linux (2.38.1-2) over (2.38.1-1.1+b1) ... Setting up util-linux (2.38.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8638 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.05-7_amd64.deb ... Unpacking sysvinit-utils (3.05-7) over (3.05-6) ... Setting up sysvinit-utils (3.05-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8638 files and directories currently installed.) Preparing to unpack .../mount_2.38.1-2_amd64.deb ... Unpacking mount (2.38.1-2) over (2.38.1-1.1+b1) ... Preparing to unpack .../libblkid1_2.38.1-2_amd64.deb ... Unpacking libblkid1:amd64 (2.38.1-2) over (2.38.1-1.1+b1) ... Setting up libblkid1:amd64 (2.38.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8636 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.46-1_amd64.deb ... Unpacking libgpg-error0:amd64 (1.46-1) over (1.45-2) ... Setting up libgpg-error0:amd64 (1.46-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8636 files and directories currently installed.) Preparing to unpack .../libmount1_2.38.1-2_amd64.deb ... Unpacking libmount1:amd64 (2.38.1-2) over (2.38.1-1.1+b1) ... Setting up libmount1:amd64 (2.38.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8635 files and directories currently installed.) Preparing to unpack .../libuuid1_2.38.1-2_amd64.deb ... Unpacking libuuid1:amd64 (2.38.1-2) over (2.38.1-1.1+b1) ... Setting up libuuid1:amd64 (2.38.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8634 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.2.13.dfsg-1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.13.dfsg-1) over (1:1.2.11.dfsg-4.1) ... Setting up zlib1g:amd64 (1:1.2.13.dfsg-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8634 files and directories currently installed.) Preparing to unpack .../grabix_0.1.7-4_amd64.deb ... Unpacking grabix (0.1.7-4) over (0.1.7-3+b1) ... Setting up mount (2.38.1-2) ... Setting up grabix (0.1.7-4) ... Processing triggers for libc-bin (2.36-5) ... 0m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-yf', 'dist-upgrade'] 0m14.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m15.2s DUMP: 5ee10e42734ab7ad3e8cb3e465d23581 - 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'show', '--no-all-versions', 'grabix'] 0m15.4s DUMP: Package: grabix Version: 0.1.7-4 Installed-Size: 56 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.3.1), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.0), tabix Description-en: wee tool for random access into BGZF files In biomedical research it is increasing practice to study the genetic basis of disease. This now frequently comprises the sequencing of human sequences. The output of the machine however is redundant, and the real sequence is the best sequence to explain the redundancy. The exchange of data happens only with compressed files - to huge and redundant to perform otherwise. One should avoid uncompression whenever possible. . grabix leverages the fantastic BGZF library of the samtools package to provide random access into text files that have been compressed with bgzip. grabix creates it's own index (.gbi) of the bgzipped file. Once indexed, one can extract arbitrary lines from the file with the grab command. Or choose random lines with the, well, random command. Description-md5: 0eef255501daa10dd72d7e36a6dc23b6 Homepage: https://github.com/arq5x/grabix Section: science Priority: optional Filename: pool/main/g/grabix/grabix_0.1.7-4_amd64.deb Size: 14772 MD5sum: 50f91fe37a93a33ec886cfd4e685e81f SHA256: 08c61033c3e75394cd2fcdd0e92a21b96b8cf79e2fc84c3aaff5accd090bc364 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'show', '--no-all-versions', 'grabix'] 0m15.4s INFO: apt-cache knows about the following packages: grabix 0m15.4s INFO: Running scripts pre_install 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_database-server'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_database-server'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_exceptions'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_exceptions'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_extras'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_extras'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy'] 0m15.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy', 'grabix'] 0m15.5s DUMP: grabix: Installed: 0.1.7-4 Candidate: 0.1.7-4 Version table: *** 0.1.7-4 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy', 'grabix'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-y', 'install', 'grabix'] 0m15.9s DUMP: Reading package lists... Building dependency tree... Reading state information... grabix is already the newest version (0.1.7-4). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m15.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-y', 'install', 'grabix'] 0m15.9s INFO: Running scripts post_install 0m15.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_install_exceptions'] 0m15.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_install_exceptions'] 0m15.9s INFO: Running scripts post_distupgrade 0m15.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m15.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m15.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_exceptions'] 0m15.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_exceptions'] 0m15.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m15.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m15.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m15.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m15.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_zz_backports'] 0m15.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_distupgrade_zz_backports'] 0m15.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m16.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m16.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m16.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m16.7s INFO: Running scripts pre_install 0m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_database-server'] 0m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_database-server'] 0m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_exceptions'] 0m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_exceptions'] 0m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_extras'] 0m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_extras'] 0m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture'] 0m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture'] 0m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy'] 0m16.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m16.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy'] 0m16.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy', 'grabix'] 0m16.8s DUMP: grabix: Installed: 0.1.7-4 Candidate: 0.1.7-4 Version table: *** 0.1.7-4 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m16.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-cache', 'policy', 'grabix'] 0m16.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-y', 'install', 'grabix=0.1.7-4'] 0m17.2s DUMP: Reading package lists... Building dependency tree... Reading state information... grabix is already the newest version (0.1.7-4). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m17.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', '-y', 'install', 'grabix=0.1.7-4'] 0m17.2s INFO: Running scripts post_install 0m17.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_install_exceptions'] 0m17.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_install_exceptions'] 0m17.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m17.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m18.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', '-ac', '--ignore-obsolete'] 0m18.8s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', '-ac', '--ignore-obsolete'] 0m18.8s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m18.8s DUMP: 0.15.6 0m18.8s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m18.8s INFO: Running adequate version 0.15.6 now. 0m18.8s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'grabix'] 0m18.9s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'grabix'] 0m18.9s INFO: Running scripts pre_remove 0m18.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m18.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m18.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m18.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m18.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m19.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m19.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m19.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m19.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m19.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m19.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_exceptions'] 0m19.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/pre_remove_exceptions'] 0m19.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m19.5s DUMP: install ok installed apt apt 2.5.4 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2-2+b1 install ok installed bsdutils bsdutils 1:2.38.1-2 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-9 install ok installed debconf debconf 1.5.79 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-1 install ok installed dpkg dpkg 1.21.9+b1 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1+b1 install ok installed findutils findutils 4.9.0-3 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-9 install ok installed gpgv gpgv 2.2.40-1 install ok installed grabix grabix 0.1.7-4 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.4 install ok installed libattr1:amd64 libattr1 1:2.5.1-1 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libblkid1:amd64 libblkid1 2.38.1-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-5 install ok installed libc6:amd64 libc6 2.36-5 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.44-1 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.30-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.264 install ok installed libdeflate0:amd64 libdeflate0 1.14-1 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-2 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-9 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-2 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libhtscodecs2:amd64 libhtscodecs2 1.3.0-4 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.2.7-0.1 install ok installed libmount1:amd64 libmount1 2.38.1-2 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-5 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-5 install ok installed libpam-runtime libpam-runtime 1.5.2-5 install ok installed libpam0g:amd64 libpam0g 1.5.2-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-2 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b3 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b3 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-2 install ok installed libss2:amd64 libss2 1.46.6~rc1-1+b1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-9 install ok installed libsystemd0:amd64 libsystemd0 252.1-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.3+20220423-2 install ok installed libudev1:amd64 libudev1 252.1-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-2 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg-1 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1+b1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-2 install ok installed ncurses-base ncurses-base 6.3+20220423-2 install ok installed ncurses-bin ncurses-bin 6.3+20220423-2 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-4 install ok installed perl-base perl-base 5.36.0-4 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-4 install ok installed sed sed 4.8-1 install ok installed sysvinit-utils sysvinit-utils 3.05-7 install ok installed tabix tabix 1.16+ds-3 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2022f-1 install ok installed usr-is-merged usr-is-merged 33 install ok installed usrmerge usrmerge 33 install ok installed util-linux util-linux 2.38.1-2 install ok installed util-linux-extra util-linux-extra 2.38.1-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m19.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m19.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', 'remove', 'libdeflate0:amd64', 'libhtscodecs2:amd64', 'tabix', 'grabix'] 0m20.1s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: grabix libdeflate0 libhtscodecs2 tabix 0 upgraded, 0 newly installed, 4 to remove and 0 not upgraded. After this operation, 2681 kB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8633 files and directories currently installed.) Removing grabix (0.1.7-4) ... Removing tabix (1.16+ds-3) ... Removing libdeflate0:amd64 (1.14-1) ... Removing libhtscodecs2:amd64 (1.3.0-4) ... Processing triggers for libc-bin (2.36-5) ... 0m20.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', 'remove', 'libdeflate0:amd64', 'libhtscodecs2:amd64', 'tabix', 'grabix'] 0m20.1s INFO: Running scripts post_remove 0m20.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_remove_exceptions'] 0m20.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_remove_exceptions'] 0m20.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg', '--purge', 'libdeflate0:amd64', 'libhtscodecs2:amd64', 'tabix'] 0m20.1s DUMP: dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libhtscodecs2 which isn't installed dpkg: warning: ignoring request to remove tabix which isn't installed 0m20.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg', '--purge', 'libdeflate0:amd64', 'libhtscodecs2:amd64', 'tabix'] 0m20.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg', '--purge', 'grabix'] 0m20.2s DUMP: dpkg: warning: ignoring request to remove grabix which isn't installed 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg', '--purge', 'grabix'] 0m20.2s INFO: Running scripts post_purge 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_purge_exceptions'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_purge_exceptions'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg', '--purge', '--pending'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg', '--purge', '--pending'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg', '--remove', '--pending'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg', '--remove', '--pending'] 0m20.2s INFO: Running scripts post_test 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_test_exceptions'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'tmp/scripts/post_test_exceptions'] 0m20.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m20.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m20.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg-divert', '--list'] 0m20.6s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m20.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'dpkg-divert', '--list'] 0m20.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', 'clean'] 0m20.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp652zdt7o', 'apt-get', 'clean'] 0m20.6s DEBUG: Recording chroot state 0m21.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/shm'] 0m21.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/shm'] 0m21.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/console'] 0m21.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/console'] 0m21.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/ptmx'] 0m21.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/ptmx'] 0m21.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/pts'] 0m21.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/dev/pts'] 0m21.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/proc'] 0m21.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp652zdt7o/proc'] 0m21.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m21.8s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp652zdt7o'] 0m21.8s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp652zdt7o 0m21.8s INFO: PASS: Upgrading between Debian distributions. 0m21.8s INFO: PASS: All tests. 0m21.8s INFO: piuparts run ends. ret=0 End: 2022-11-18 15:30:28 GMT