Start: 2024-12-27 03:20:02 GMT [testing] Package: lammps-examples Source: lammps Version: 20240207+dfsg-2 Installed-Size: 216480 Maintainer: Debian Science Maintainers Architecture: all Recommends: lammps Description: Molecular Dynamics Simulator (examples) Multi-Arch: foreign Homepage: https://lammps.sandia.gov/ Description-md5: f43cc2bbd2c8af5c281a7d19e42e8091 Section: doc Priority: optional Filename: pool/main/l/lammps/lammps-examples_20240207+dfsg-2_all.deb Size: 45429640 MD5sum: 9a7cc73e034c1776dc167f02a110e827 SHA256: afcd77a37797ac21fc56a2eb25b969fed034de2163c5f8ccbc433d5519757c42 [sid] Package: lammps-examples Source: lammps Version: 20240207+dfsg-3 Installed-Size: 216480 Maintainer: Debian Science Maintainers Architecture: all Recommends: lammps Description: Molecular Dynamics Simulator (examples) Multi-Arch: foreign Homepage: https://lammps.sandia.gov/ Description-md5: f43cc2bbd2c8af5c281a7d19e42e8091 Section: doc Priority: optional Filename: pool/main/l/lammps/lammps-examples_20240207+dfsg-3_all.deb Size: 45455320 MD5sum: 4092df30118a329376495c7712a582e3 SHA256: 4c28def9c3de4d66819c43a482a15f106f4c6c5b1a7bc4a848e468d0c4828474 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt lammps-examples=20240207+dfsg-3 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt lammps-examples=20240207+dfsg-3 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpbddjfxqa 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpbddjfxqa 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/proc'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/proc'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/pts'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/pts'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/ptmx'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/ptmx'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/console'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/console'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/shm'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/shm'] 0m0.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.2s DEBUG: Created policy-rc.d and chmodded it. 0m0.2s DEBUG: Created resolv.conf. 0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpbddjfxqa/tmp/scripts/ 0m0.2s INFO: Running scripts post_chroot_unpack 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', 'update'] 0m1.4s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [172 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9394 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6298 kB] Fetched 15.9 MB in 1s (20.3 MB/s) Reading package lists... 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', 'update'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-yf', 'dist-upgrade'] 0m2.0s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: libsystemd0 libudev1 tar 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1412 kB of archives. After this operation, 8192 B of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 tar amd64 1.35+dfsg-3.1 [815 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libsystemd0 amd64 257.1-4 [450 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libudev1 amd64 257.1-4 [148 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1412 kB in 0s (58.5 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5131 files and directories currently installed.) Preparing to unpack .../tar_1.35+dfsg-3.1_amd64.deb ... Unpacking tar (1.35+dfsg-3.1) over (1.35+dfsg-3) ... Setting up tar (1.35+dfsg-3.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5131 files and directories currently installed.) Preparing to unpack .../libsystemd0_257.1-4_amd64.deb ... Unpacking libsystemd0:amd64 (257.1-4) over (257-2) ... Setting up libsystemd0:amd64 (257.1-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5131 files and directories currently installed.) Preparing to unpack .../libudev1_257.1-4_amd64.deb ... Unpacking libudev1:amd64 (257.1-4) over (257-2) ... Setting up libudev1:amd64 (257.1-4) ... Processing triggers for libc-bin (2.40-4) ... 0m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-yf', 'dist-upgrade'] 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.1s DUMP: 225e4fc063d2df00726614f79740ebe4 - 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.1s INFO: Running scripts post_setup 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_dummy_users'] 0m2.6s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_dummy_users'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_forbid_home'] 0m2.6s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_forbid_home'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.6s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_force-unsafe-io'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_minimize'] 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_minimize'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_squeeze-backports'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_zz_backports'] 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_setup_zz_backports'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.6s DUMP: install ok installed apt apt 2.9.17 install ok installed base-files base-files 13.6 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.37-1 install ok installed bsdutils bsdutils 1:2.40.2-12 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.21 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.2~rc1-2 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-8 install ok installed gpgv gpgv 2.2.45-2 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.2 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.17 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.2-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2 install ok installed libblkid1:amd64 libblkid1 2.40.2-12 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-4 install ok installed libc6:amd64 libc6 2.40-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.2~rc1-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.274 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2~rc1-2 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-8 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.8-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.51-2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.2-12 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2+b1 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.44-5 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2 install ok installed libselinux1:amd64 libselinux1 3.7-3+b1 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2+b1 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-12 install ok installed libss2:amd64 libss2 1.47.2~rc1-2 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-8 install ok installed libsystemd0:amd64 libsystemd0 257.1-4 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libudev1:amd64 libudev1 257.1-4 install ok installed libunistring5:amd64 libunistring5 1.3-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-12 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed login login 1:4.16.0-2+really2.40.2-12 install ok installed login.defs login.defs 1:4.16.0-7 install ok installed logsave logsave 1.47.2~rc1-2 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-12 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed passwd passwd 1:4.16.0-7 install ok installed perl-base perl-base 5.40.0-8 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3.1 install ok installed tzdata tzdata 2024b-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-12 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m2.6s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m2.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m2.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m2.8s INFO: Running scripts is_testable 0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/is_testable_uninstallable'] 0m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/is_testable_uninstallable'] 0m2.8s INFO: Running scripts pre_test 0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_test_exceptions'] 0m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_test_exceptions'] 0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_test_root_password'] 0m2.8s DUMP: New password: Retype new password: passwd: password updated successfully 0m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_test_root_password'] 0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'show', '--no-all-versions', 'lammps-examples'] 0m2.9s DUMP: Package: lammps-examples Source: lammps Version: 20240207+dfsg-2 Installed-Size: 216480 Maintainer: Debian Science Maintainers Architecture: all Recommends: lammps Description-en: Molecular Dynamics Simulator (examples) LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. . LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. . LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. . The package contains example scripts and benchmarks. Description-md5: f43cc2bbd2c8af5c281a7d19e42e8091 Multi-Arch: foreign Homepage: https://lammps.sandia.gov/ Section: doc Priority: optional Filename: pool/main/l/lammps/lammps-examples_20240207+dfsg-2_all.deb Size: 45429640 MD5sum: 9a7cc73e034c1776dc167f02a110e827 SHA256: afcd77a37797ac21fc56a2eb25b969fed034de2163c5f8ccbc433d5519757c42 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'show', '--no-all-versions', 'lammps-examples'] 0m2.9s INFO: apt-cache knows about the following packages: lammps-examples 0m2.9s INFO: Running scripts pre_install 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_database-server'] 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_database-server'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_exceptions'] 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_exceptions'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_extras'] 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_extras'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy'] 0m3.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy', 'lammps-examples'] 0m3.0s DUMP: lammps-examples: Installed: (none) Candidate: 20240207+dfsg-2 Version table: 20240207+dfsg-2 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m3.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy', 'lammps-examples'] 0m3.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-y', 'install', 'lammps-examples'] 0m4.6s DUMP: Reading package lists... Building dependency tree... Reading state information... Recommended packages: lammps The following NEW packages will be installed: lammps-examples 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 45.4 MB of archives. After this operation, 222 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 lammps-examples all 20240207+dfsg-2 [45.4 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 45.4 MB in 0s (242 MB/s) Selecting previously unselected package lammps-examples. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5135 files and directories currently installed.) Preparing to unpack .../lammps-examples_20240207+dfsg-2_all.deb ... Unpacking lammps-examples (20240207+dfsg-2) ... Setting up lammps-examples (20240207+dfsg-2) ... 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-y', 'install', 'lammps-examples'] 0m4.6s INFO: Running scripts post_install 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_install_exceptions'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_install_exceptions'] 0m4.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m4.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m4.9s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpbddjfxqa to sid 0m4.9s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m4.9s INFO: Running scripts pre_distupgrade 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_exceptions'] 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_exceptions'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', 'update'] 0m6.7s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [202 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.1 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7363 kB] Fetched 17.7 MB in 1s (12.8 MB/s) Reading package lists... 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', 'update'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-yf', 'dist-upgrade'] 0m10.1s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: sqv The following packages will be upgraded: apt bsdutils debconf gcc-14-base lammps-examples libapt-pkg6.0t64 libblkid1 libdebconfclient0 libgcc-s1 libgcrypt20 libgpg-error0 libmount1 libp11-kit0 libsmartcols1 libstdc++6 libsystemd0 libudev1 libuuid1 login mount util-linux 21 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 53.6 MB of archives. After this operation, 1873 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.40.2-13 [106 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.40.2-13 [36.1 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.40.2-13 [168 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.40.2-13 [199 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.40.2-13 [139 kB] Get:6 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.40.2-13 [1209 kB] Get:7 http://deb.debian.org/debian sid/main amd64 mount amd64 2.40.2-13 [155 kB] Get:8 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-11 [48.0 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-11 [72.7 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-11 [713 kB] Get:11 http://deb.debian.org/debian sid/main amd64 sqv amd64 1.2.1-5 [615 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 257.1-5 [449 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 257.1-5 [148 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libapt-pkg6.0t64 amd64 2.9.19 [1114 kB] Get:15 http://deb.debian.org/debian sid/main amd64 apt amd64 2.9.19 [1390 kB] Get:16 http://deb.debian.org/debian sid/main amd64 login amd64 1:4.16.0-2+really2.40.2-13 [81.9 kB] Get:17 http://deb.debian.org/debian sid/main amd64 debconf all 1.5.89 [120 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libdebconfclient0 amd64 0.276 [10.3 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libgpg-error0 amd64 1.51-3 [82.2 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get:22 http://deb.debian.org/debian sid/main amd64 lammps-examples all 20240207+dfsg-3 [45.5 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 53.6 MB in 1s (65.8 MB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9014 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.25.5-3_amd64.deb ... Unpacking libp11-kit0:amd64 (0.25.5-3) over (0.25.5-2+b1) ... Setting up libp11-kit0:amd64 (0.25.5-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9013 files and directories currently installed.) Preparing to unpack .../lammps-examples_20240207+dfsg-3_all.deb ... Unpacking lammps-examples (20240207+dfsg-3) over (20240207+dfsg-2) ... Setting up lammps-examples (20240207+dfsg-3) ... Setting up mount (2.40.2-13) ... Setting up login (1:4.16.0-2+really2.40.2-13) ... Processing triggers for libc-bin (2.40-4) ... 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-yf', 'dist-upgrade'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m10.7s DUMP: add48e66809a30d951d48173a3e9657d - 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'show', '--no-all-versions', 'lammps-examples'] 0m10.8s DUMP: Package: lammps-examples Source: lammps Version: 20240207+dfsg-3 Installed-Size: 216480 Maintainer: Debian Science Maintainers Architecture: all Recommends: lammps Description-en: Molecular Dynamics Simulator (examples) LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. . LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. . LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. . The package contains example scripts and benchmarks. Description-md5: f43cc2bbd2c8af5c281a7d19e42e8091 Multi-Arch: foreign Homepage: https://lammps.sandia.gov/ Section: doc Priority: optional Filename: pool/main/l/lammps/lammps-examples_20240207+dfsg-3_all.deb Size: 45455320 MD5sum: 4092df30118a329376495c7712a582e3 SHA256: 4c28def9c3de4d66819c43a482a15f106f4c6c5b1a7bc4a848e468d0c4828474 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'show', '--no-all-versions', 'lammps-examples'] 0m10.8s INFO: apt-cache knows about the following packages: lammps-examples 0m10.8s INFO: Running scripts pre_install 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_database-server'] 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_database-server'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_exceptions'] 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_exceptions'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_extras'] 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_extras'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy'] 0m10.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy', 'lammps-examples'] 0m10.9s DUMP: lammps-examples: Installed: 20240207+dfsg-3 Candidate: 20240207+dfsg-3 Version table: *** 20240207+dfsg-3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy', 'lammps-examples'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-y', 'install', 'lammps-examples'] 0m11.2s DUMP: Reading package lists... Building dependency tree... Reading state information... lammps-examples is already the newest version (20240207+dfsg-3). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-y', 'install', 'lammps-examples'] 0m11.2s INFO: Running scripts post_install 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_install_exceptions'] 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_install_exceptions'] 0m11.2s INFO: Running scripts post_distupgrade 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_exceptions'] 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_exceptions'] 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_zz_backports'] 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_distupgrade_zz_backports'] 0m11.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m11.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m11.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m11.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m11.8s INFO: Running scripts pre_install 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_database-server'] 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_database-server'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_exceptions'] 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_exceptions'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_extras'] 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_extras'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture'] 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy'] 0m11.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy', 'lammps-examples'] 0m11.8s DUMP: lammps-examples: Installed: 20240207+dfsg-3 Candidate: 20240207+dfsg-3 Version table: *** 20240207+dfsg-3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-cache', 'policy', 'lammps-examples'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-y', 'install', 'lammps-examples=20240207+dfsg-3'] 0m12.1s DUMP: Reading package lists... Building dependency tree... Reading state information... lammps-examples is already the newest version (20240207+dfsg-3). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m12.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', '-y', 'install', 'lammps-examples=20240207+dfsg-3'] 0m12.1s INFO: Running scripts post_install 0m12.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_install_exceptions'] 0m12.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_install_exceptions'] 0m12.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m12.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m12.7s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', '-ac', '--ignore-obsolete'] 0m13.5s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', '-ac', '--ignore-obsolete'] 0m13.5s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m13.5s DUMP: 0.15.6 0m13.5s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m13.5s INFO: Running adequate version 0.15.6 now. 0m13.5s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'lammps-examples'] 0m13.6s DUMP: lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/CH.airebo -> ../../potentials/CH.airebo lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/CH.rebo -> ../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/CdTe.bop.table -> ../../potentials/CdTe.bop.table lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Cu_u3.eam -> ../../potentials/Cu_u3.eam lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Ni.adp -> ../../potentials/Ni.adp lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Ni.meam -> ../../potentials/Ni.meam lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Si.sw -> ../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Si.tersoff -> ../../potentials/Si.tersoff lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/library.meam -> ../../potentials/library.meam lammps-examples: broken-symlink /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Silicon/Si.sw -> ../../../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/ELASTIC_T/DEFORMATION/Silicon/Si.sw -> ../../../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/alchemy/AlCu.eam.alloy -> ../../../potentials/AlCu.eam.alloy lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/atc/cauchy_born/Au_u3.eam -> ../../../../potentials/Au_u3.eam lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/cauchy/NiAlH_jea.eam.alloy -> ../../../potentials/NiAlH_jea.eam.alloy lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/electron_stopping/Si.sw -> ../../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/extep/BN.extep -> ../../../potentials/BN.extep lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/CBNOH.aip.water.2dm -> ../../../../potentials/CBNOH.aip.water.2dm lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/drip/C.drip -> ../../../../potentials/C.drip lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/drip/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/BNC.tersoff -> ../../../../potentials/BNC.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/BNCH-old.ILP -> ../../../../potentials/BNCH-old.ILP lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/BNCH.ILP -> ../../../../potentials/BNCH.ILP lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_tmds/TMD.ILP -> ../../../../potentials/TMD.ILP lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/CH_taper.KC -> ../../../../potentials/CH_taper.KC lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/CC.KC -> ../../../../potentials/CC.KC lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/Au_u3.eam -> ../../../../potentials/Au_u3.eam lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/CHAu.ILP -> ../../../../potentials/CHAu.ILP lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/meam_spline/Si_1.meam.spline -> ../../../potentials/Si_1.meam.spline lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/meam_spline/TiO.meam.spline -> ../../../potentials/TiO.meam.spline lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/Si.b.meam.sw.spline -> ../../../../potentials/Si.b.meam.sw.spline lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/meam_sw_spline/Ti/Ti.meam.sw.spline -> ../../../../potentials/Ti.meam.sw.spline lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/mesont/C_10_10.mesocnt -> ../../../potentials/C_10_10.mesocnt lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/orient_eco/Ni_u3.eam -> ../../../potentials/Ni_u3.eam lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/pace/Cu-PBE-core-rep.ace -> ../../../potentials/Cu-PBE-core-rep.ace lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/pace/plugin/LAMMPSInterfacePlugin.cmake -> ../../../../cmake/Modules/LAMMPSInterfacePlugin.cmake lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/pace/plugin/ML-PACE.cmake -> ../../../../cmake/Modules/Packages/ML-PACE.cmake lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/phonon/dynamical_matrix_command/Silicon/SiCGe.tersoff -> ../../../../../potentials/SiCGe.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/phonon/dynamical_matrix_command/python/SiCGe.tersoff -> ../../../../../potentials/SiCGe.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/pod/Ta/Ta_coeff.pod -> ../../../../potentials/Ta_coeff.pod lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/Zr_mm.eam.fs -> ../../../potentials/Zr_mm.eam.fs lammps-examples: broken-symlink /usr/share/lammps/examples/airebo/CH.airebo -> ../../potentials/CH.airebo lammps-examples: broken-symlink /usr/share/lammps/examples/airebo/CH.airebo-m -> ../../potentials/CH.airebo-m lammps-examples: broken-symlink /usr/share/lammps/examples/airebo/CH.rebo -> ../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/comb/ffield.comb -> ../../potentials/ffield.comb lammps-examples: broken-symlink /usr/share/lammps/examples/comb/ffield.comb3 -> ../../potentials/ffield.comb3 lammps-examples: broken-symlink /usr/share/lammps/examples/eim/ffield.eim -> ../../potentials/ffield.eim lammps-examples: broken-symlink /usr/share/lammps/examples/kim/plugin/LAMMPSInterfacePlugin.cmake -> ../../../cmake/Modules/LAMMPSInterfacePlugin.cmake lammps-examples: broken-symlink /usr/share/lammps/examples/meam/Ni.meam -> ../../potentials/Ni.meam lammps-examples: broken-symlink /usr/share/lammps/examples/meam/SiC.meam -> ../../potentials/SiC.meam lammps-examples: broken-symlink /usr/share/lammps/examples/meam/library.meam -> ../../potentials/library.meam lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Cu.nn.mliap.model -> ../../potentials/Cu.nn.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Cu.snap.mliap.descriptor -> ../../potentials/Cu.snap.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/InP_JCPA2020.mliap -> ../../potentials/InP_JCPA2020.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/InP_JCPA2020.mliap.descriptor -> ../../potentials/InP_JCPA2020.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/InP_JCPA2020.mliap.model -> ../../potentials/InP_JCPA2020.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ni_Mo.mliap.descriptor -> ../../potentials/Ni_Mo.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ni_Mo.mliap.model -> ../../potentials/Ni_Mo.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Si.nn.mliap.descriptor -> ../../potentials/Si.nn.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Si.nn.mliap.model -> ../../potentials/Si.nn.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.mliap -> ../../potentials/Ta06A.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.mliap.descriptor -> ../../potentials/Ta06A.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.mliap.model -> ../../potentials/Ta06A.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.nn.mliap -> ../../potentials/Ta06A.nn.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.nn.mliap.model -> ../../potentials/Ta06A.nn.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.pytorch.mliap -> ../../potentials/Ta06A.pytorch.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/W.quadratic.mliap -> ../../potentials/W.quadratic.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/W.quadratic.mliap.descriptor -> ../../potentials/W.quadratic.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/W.quadratic.mliap.model -> ../../potentials/W.quadratic.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/WBe_Wood_PRB2019.mliap -> ../../potentials/WBe_Wood_PRB2019.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/WBe_Wood_PRB2019.mliap.descriptor -> ../../potentials/WBe_Wood_PRB2019.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/WBe_Wood_PRB2019.mliap.model -> ../../potentials/WBe_Wood_PRB2019.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/nb3b/PSiO.nb3b.screened -> ../../potentials/PSiO.nb3b.screened lammps-examples: broken-symlink /usr/share/lammps/examples/reaxff/water/acks2_ff.water -> ../../../potentials/acks2_ff.water lammps-examples: broken-symlink /usr/share/lammps/examples/snap/C_SNAP_2021.10.15.quadratic.snapcoeff -> ../../potentials/C_SNAP_2021.10.15.quadratic.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/C_SNAP_2021.10.15.quadratic.snapparam -> ../../potentials/C_SNAP_2021.10.15.quadratic.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/He_He_JW2013.table -> ../../potentials/He_He_JW2013.table lammps-examples: broken-symlink /usr/share/lammps/examples/snap/InP_JCPA2020.snap -> ../../potentials/InP_JCPA2020.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/InP_JCPA2020.snapcoeff -> ../../potentials/InP_JCPA2020.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/InP_JCPA2020.snapparam -> ../../potentials/InP_JCPA2020.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Mo_Chen_PRM2017.snap -> ../../potentials/Mo_Chen_PRM2017.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Mo_Chen_PRM2017.snapcoeff -> ../../potentials/Mo_Chen_PRM2017.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Mo_Chen_PRM2017.snapparam -> ../../potentials/Mo_Chen_PRM2017.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.quadratic.snapcoeff -> ../../potentials/Ni_Zuo_JPCA2020.quadratic.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.quadratic.snapparam -> ../../potentials/Ni_Zuo_JPCA2020.quadratic.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.snapcoeff -> ../../potentials/Ni_Zuo_JPCA2020.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.snapparam -> ../../potentials/Ni_Zuo_JPCA2020.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ta06A.snap -> ../../potentials/Ta06A.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ta06A.snapcoeff -> ../../potentials/Ta06A.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ta06A.snapparam -> ../../potentials/Ta06A.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/WBe_Wood_PRB2019.snap -> ../../potentials/WBe_Wood_PRB2019.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/WBe_Wood_PRB2019.snapcoeff -> ../../potentials/WBe_Wood_PRB2019.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/WBe_Wood_PRB2019.snapparam -> ../../potentials/WBe_Wood_PRB2019.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_2940_2017_2.snap -> ../../potentials/W_2940_2017_2.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_2940_2017_2.snapcoeff -> ../../potentials/W_2940_2017_2.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_2940_2017_2.snapparam -> ../../potentials/W_2940_2017_2.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_2940_2017_2_He_JW2013.snap -> ../../potentials/W_2940_2017_2_He_JW2013.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_He_JW2013.table -> ../../potentials/W_He_JW2013.table lammps-examples: broken-symlink /usr/share/lammps/examples/tersoff/BNC.tersoff -> ../../potentials/BNC.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/tersoff/Si.tersoff -> ../../potentials/Si.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/tersoff/Si.tersoff.mod -> ../../potentials/Si.tersoff.mod lammps-examples: broken-symlink /usr/share/lammps/examples/tersoff/Si.tersoff.modc -> ../../potentials/Si.tersoff.modc lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/BNC.tersoff -> ../../potentials/BNC.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/CdTeZnSeHgS0.sw -> ../../potentials/CdTeZnSeHgS0.sw lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/InP.vashishta -> ../../potentials/InP.vashishta lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/Si.sw -> ../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/SiC.tersoff.zbl -> ../../potentials/SiC.tersoff.zbl lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/tmd.sw.mod -> ../../potentials/tmd.sw.mod lammps-examples: broken-symlink /usr/share/lammps/examples/ttm/Si.sw -> ../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/vashishta/InP.vashishta -> ../../potentials/InP.vashishta lammps-examples: broken-symlink /usr/share/lammps/examples/vashishta/SiO.1990.vashishta -> ../../potentials/SiO.1990.vashishta lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/box/box.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/dimer/dimer.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/line/line.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/line/line.srd.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/line/line.srd.viz.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/line/line.viz.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/star/star.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/tri/tri.srd.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/tri/tri.srd.viz.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/COUPLE/python/example.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC/compliance.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Argon/Analytical/compute_born.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Argon/Numdiff/compute_born.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Silicon/elastic.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Silicon/elastic_utils.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/cgdna/examples/oxDNA2/unique_bp/generate_unique.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/cgdna/util/generate.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/cgdna/util/generate_simple.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/electrode/madelung/eval.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/electrode/madelung/plate_cap.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/grem/lj-6rep/double-re-short.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/phonon/dynamical_matrix_command/python/dynmat.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/QUANTUM/LATTE/latte_mdi.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/QUANTUM/NWChem/nwchem_mdi.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/QUANTUM/PySCF/pyscf_mdi.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/cobalt_fcc/exchange_fit_fcc_co/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/cobalt_hcp/exchange_fit_hcp_co/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/dipole_spin/exchange_fit_bcc_iron/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/iron/exchange_fit_bcc_iron/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/nickel/exchange_fit_fcc_ni/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_damped_exchange/llg_exchange.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_damped_exchange/plot_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_damped_precession/llg_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_damped_precession/plot_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_langevin_precession_d0.01/langevin.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_langevin_precession_d0.01/plot_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_langevin_precession_d1.0/langevin.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_langevin_precession_d1.0/plot_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_nve/plot_nve.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_nvt/plot_nvt.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mdi/aimd_driver.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mdi/sequence_driver.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/convert_mliap_Ta06A.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/jax/deploy_script.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/jax/mliap_unified_jax.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/jax/mliap_unified_jax_kokkos.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/jax/write_unified.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/mliap_numpy_Ta06A.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/mliap_pytorch_Ta06A.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/mliap_pytorch_Ta06A_kokkos.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/mliap_unified_lj_Ar.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/python/funcs.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/python/py_nve.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/python/py_pot.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/snap/compute_snap_dgrad.py 0m13.6s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'lammps-examples'] 0m13.6s ERROR: WARN: Inadequate results from running adequate! lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/CH.airebo -> ../../potentials/CH.airebo lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/CH.rebo -> ../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/CdTe.bop.table -> ../../potentials/CdTe.bop.table lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Cu_u3.eam -> ../../potentials/Cu_u3.eam lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Ni.adp -> ../../potentials/Ni.adp lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Ni.meam -> ../../potentials/Ni.meam lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Si.sw -> ../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/Si.tersoff -> ../../potentials/Si.tersoff lammps-examples: broken-symlink /usr/share/lammps/bench/POTENTIALS/library.meam -> ../../potentials/library.meam lammps-examples: broken-symlink /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Silicon/Si.sw -> ../../../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/ELASTIC_T/DEFORMATION/Silicon/Si.sw -> ../../../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/alchemy/AlCu.eam.alloy -> ../../../potentials/AlCu.eam.alloy lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/atc/cauchy_born/Au_u3.eam -> ../../../../potentials/Au_u3.eam lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/cauchy/NiAlH_jea.eam.alloy -> ../../../potentials/NiAlH_jea.eam.alloy lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/electron_stopping/Si.sw -> ../../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/extep/BN.extep -> ../../../potentials/BN.extep lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/aip_water_2dm/CBNOH.aip.water.2dm -> ../../../../potentials/CBNOH.aip.water.2dm lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/drip/C.drip -> ../../../../potentials/C.drip lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/drip/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/BNC.tersoff -> ../../../../potentials/BNC.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/BNCH-old.ILP -> ../../../../potentials/BNCH-old.ILP lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/BNCH.ILP -> ../../../../potentials/BNCH.ILP lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_graphene_hbn/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/ilp_tmds/TMD.ILP -> ../../../../potentials/TMD.ILP lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_full/CH_taper.KC -> ../../../../potentials/CH_taper.KC lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/CC.KC -> ../../../../potentials/CC.KC lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/kolmogorov_crespi_z/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/Au_u3.eam -> ../../../../potentials/Au_u3.eam lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/CH.rebo -> ../../../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/interlayer/saip_metal/CHAu.ILP -> ../../../../potentials/CHAu.ILP lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/meam_spline/Si_1.meam.spline -> ../../../potentials/Si_1.meam.spline lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/meam_spline/TiO.meam.spline -> ../../../potentials/TiO.meam.spline lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/meam_sw_spline/Si/Si.b.meam.sw.spline -> ../../../../potentials/Si.b.meam.sw.spline lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/meam_sw_spline/Ti/Ti.meam.sw.spline -> ../../../../potentials/Ti.meam.sw.spline lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/mesont/C_10_10.mesocnt -> ../../../potentials/C_10_10.mesocnt lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/orient_eco/Ni_u3.eam -> ../../../potentials/Ni_u3.eam lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/pace/Cu-PBE-core-rep.ace -> ../../../potentials/Cu-PBE-core-rep.ace lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/pace/plugin/LAMMPSInterfacePlugin.cmake -> ../../../../cmake/Modules/LAMMPSInterfacePlugin.cmake lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/pace/plugin/ML-PACE.cmake -> ../../../../cmake/Modules/Packages/ML-PACE.cmake lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/phonon/dynamical_matrix_command/Silicon/SiCGe.tersoff -> ../../../../../potentials/SiCGe.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/phonon/dynamical_matrix_command/python/SiCGe.tersoff -> ../../../../../potentials/SiCGe.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/pod/Ta/Ta_coeff.pod -> ../../../../potentials/Ta_coeff.pod lammps-examples: broken-symlink /usr/share/lammps/examples/PACKAGES/sna_nnn_slcsa/Zr_mm.eam.fs -> ../../../potentials/Zr_mm.eam.fs lammps-examples: broken-symlink /usr/share/lammps/examples/airebo/CH.airebo -> ../../potentials/CH.airebo lammps-examples: broken-symlink /usr/share/lammps/examples/airebo/CH.airebo-m -> ../../potentials/CH.airebo-m lammps-examples: broken-symlink /usr/share/lammps/examples/airebo/CH.rebo -> ../../potentials/CH.rebo lammps-examples: broken-symlink /usr/share/lammps/examples/comb/ffield.comb -> ../../potentials/ffield.comb lammps-examples: broken-symlink /usr/share/lammps/examples/comb/ffield.comb3 -> ../../potentials/ffield.comb3 lammps-examples: broken-symlink /usr/share/lammps/examples/eim/ffield.eim -> ../../potentials/ffield.eim lammps-examples: broken-symlink /usr/share/lammps/examples/kim/plugin/LAMMPSInterfacePlugin.cmake -> ../../../cmake/Modules/LAMMPSInterfacePlugin.cmake lammps-examples: broken-symlink /usr/share/lammps/examples/meam/Ni.meam -> ../../potentials/Ni.meam lammps-examples: broken-symlink /usr/share/lammps/examples/meam/SiC.meam -> ../../potentials/SiC.meam lammps-examples: broken-symlink /usr/share/lammps/examples/meam/library.meam -> ../../potentials/library.meam lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Cu.nn.mliap.model -> ../../potentials/Cu.nn.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Cu.snap.mliap.descriptor -> ../../potentials/Cu.snap.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/InP_JCPA2020.mliap -> ../../potentials/InP_JCPA2020.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/InP_JCPA2020.mliap.descriptor -> ../../potentials/InP_JCPA2020.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/InP_JCPA2020.mliap.model -> ../../potentials/InP_JCPA2020.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ni_Mo.mliap.descriptor -> ../../potentials/Ni_Mo.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ni_Mo.mliap.model -> ../../potentials/Ni_Mo.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Si.nn.mliap.descriptor -> ../../potentials/Si.nn.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Si.nn.mliap.model -> ../../potentials/Si.nn.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.mliap -> ../../potentials/Ta06A.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.mliap.descriptor -> ../../potentials/Ta06A.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.mliap.model -> ../../potentials/Ta06A.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.nn.mliap -> ../../potentials/Ta06A.nn.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.nn.mliap.model -> ../../potentials/Ta06A.nn.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/Ta06A.pytorch.mliap -> ../../potentials/Ta06A.pytorch.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/W.quadratic.mliap -> ../../potentials/W.quadratic.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/W.quadratic.mliap.descriptor -> ../../potentials/W.quadratic.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/W.quadratic.mliap.model -> ../../potentials/W.quadratic.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/WBe_Wood_PRB2019.mliap -> ../../potentials/WBe_Wood_PRB2019.mliap lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/WBe_Wood_PRB2019.mliap.descriptor -> ../../potentials/WBe_Wood_PRB2019.mliap.descriptor lammps-examples: broken-symlink /usr/share/lammps/examples/mliap/WBe_Wood_PRB2019.mliap.model -> ../../potentials/WBe_Wood_PRB2019.mliap.model lammps-examples: broken-symlink /usr/share/lammps/examples/nb3b/PSiO.nb3b.screened -> ../../potentials/PSiO.nb3b.screened lammps-examples: broken-symlink /usr/share/lammps/examples/reaxff/water/acks2_ff.water -> ../../../potentials/acks2_ff.water lammps-examples: broken-symlink /usr/share/lammps/examples/snap/C_SNAP_2021.10.15.quadratic.snapcoeff -> ../../potentials/C_SNAP_2021.10.15.quadratic.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/C_SNAP_2021.10.15.quadratic.snapparam -> ../../potentials/C_SNAP_2021.10.15.quadratic.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/He_He_JW2013.table -> ../../potentials/He_He_JW2013.table lammps-examples: broken-symlink /usr/share/lammps/examples/snap/InP_JCPA2020.snap -> ../../potentials/InP_JCPA2020.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/InP_JCPA2020.snapcoeff -> ../../potentials/InP_JCPA2020.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/InP_JCPA2020.snapparam -> ../../potentials/InP_JCPA2020.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Mo_Chen_PRM2017.snap -> ../../potentials/Mo_Chen_PRM2017.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Mo_Chen_PRM2017.snapcoeff -> ../../potentials/Mo_Chen_PRM2017.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Mo_Chen_PRM2017.snapparam -> ../../potentials/Mo_Chen_PRM2017.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.quadratic.snapcoeff -> ../../potentials/Ni_Zuo_JPCA2020.quadratic.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.quadratic.snapparam -> ../../potentials/Ni_Zuo_JPCA2020.quadratic.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.snapcoeff -> ../../potentials/Ni_Zuo_JPCA2020.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ni_Zuo_JPCA2020.snapparam -> ../../potentials/Ni_Zuo_JPCA2020.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ta06A.snap -> ../../potentials/Ta06A.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ta06A.snapcoeff -> ../../potentials/Ta06A.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/Ta06A.snapparam -> ../../potentials/Ta06A.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/WBe_Wood_PRB2019.snap -> ../../potentials/WBe_Wood_PRB2019.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/WBe_Wood_PRB2019.snapcoeff -> ../../potentials/WBe_Wood_PRB2019.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/WBe_Wood_PRB2019.snapparam -> ../../potentials/WBe_Wood_PRB2019.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_2940_2017_2.snap -> ../../potentials/W_2940_2017_2.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_2940_2017_2.snapcoeff -> ../../potentials/W_2940_2017_2.snapcoeff lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_2940_2017_2.snapparam -> ../../potentials/W_2940_2017_2.snapparam lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_2940_2017_2_He_JW2013.snap -> ../../potentials/W_2940_2017_2_He_JW2013.snap lammps-examples: broken-symlink /usr/share/lammps/examples/snap/W_He_JW2013.table -> ../../potentials/W_He_JW2013.table lammps-examples: broken-symlink /usr/share/lammps/examples/tersoff/BNC.tersoff -> ../../potentials/BNC.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/tersoff/Si.tersoff -> ../../potentials/Si.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/tersoff/Si.tersoff.mod -> ../../potentials/Si.tersoff.mod lammps-examples: broken-symlink /usr/share/lammps/examples/tersoff/Si.tersoff.modc -> ../../potentials/Si.tersoff.modc lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/BNC.tersoff -> ../../potentials/BNC.tersoff lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/CdTeZnSeHgS0.sw -> ../../potentials/CdTeZnSeHgS0.sw lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/InP.vashishta -> ../../potentials/InP.vashishta lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/Si.sw -> ../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/SiC.tersoff.zbl -> ../../potentials/SiC.tersoff.zbl lammps-examples: broken-symlink /usr/share/lammps/examples/threebody/tmd.sw.mod -> ../../potentials/tmd.sw.mod lammps-examples: broken-symlink /usr/share/lammps/examples/ttm/Si.sw -> ../../potentials/Si.sw lammps-examples: broken-symlink /usr/share/lammps/examples/vashishta/InP.vashishta -> ../../potentials/InP.vashishta lammps-examples: broken-symlink /usr/share/lammps/examples/vashishta/SiO.1990.vashishta -> ../../potentials/SiO.1990.vashishta lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/box/box.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/dimer/dimer.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/line/line.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/line/line.srd.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/line/line.srd.viz.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/line/line.viz.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/star/star.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/tri/tri.srd.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ASPHERE/tri/tri.srd.viz.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/COUPLE/python/example.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC/compliance.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Argon/Analytical/compute_born.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Argon/Numdiff/compute_born.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Silicon/elastic.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/ELASTIC_T/BORN_MATRIX/Silicon/elastic_utils.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/cgdna/examples/oxDNA2/unique_bp/generate_unique.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/cgdna/util/generate.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/cgdna/util/generate_simple.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/electrode/madelung/eval.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/electrode/madelung/plate_cap.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/grem/lj-6rep/double-re-short.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/PACKAGES/phonon/dynamical_matrix_command/python/dynmat.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/QUANTUM/LATTE/latte_mdi.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/QUANTUM/NWChem/nwchem_mdi.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/QUANTUM/PySCF/pyscf_mdi.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/cobalt_fcc/exchange_fit_fcc_co/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/cobalt_hcp/exchange_fit_hcp_co/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/dipole_spin/exchange_fit_bcc_iron/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/iron/exchange_fit_bcc_iron/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/nickel/exchange_fit_fcc_ni/exchange_fit.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_damped_exchange/llg_exchange.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_damped_exchange/plot_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_damped_precession/llg_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_damped_precession/plot_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_langevin_precession_d0.01/langevin.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_langevin_precession_d0.01/plot_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_langevin_precession_d1.0/langevin.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_langevin_precession_d1.0/plot_precession.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_nve/plot_nve.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/SPIN/test_problems/validation_nvt/plot_nvt.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mdi/aimd_driver.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mdi/sequence_driver.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/convert_mliap_Ta06A.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/jax/deploy_script.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/jax/mliap_unified_jax.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/jax/mliap_unified_jax_kokkos.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/jax/write_unified.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/mliap_numpy_Ta06A.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/mliap_pytorch_Ta06A.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/mliap_pytorch_Ta06A_kokkos.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/mliap/mliap_unified_lj_Ar.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/python/funcs.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/python/py_nve.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/python/py_pot.py lammps-examples: py-file-not-bytecompiled /usr/share/lammps/examples/snap/compute_snap_dgrad.py 0m13.6s ERROR: WARN: Running adequate resulted in inadequate tags found: py-file-not-bytecompiled 0m13.6s ERROR: WARN: Running adequate resulted in less interesting tags found: broken-symlink 0m13.6s INFO: Running scripts pre_remove 0m13.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_exceptions'] 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/pre_remove_exceptions'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m14.3s DUMP: install ok installed apt apt 2.9.19 install ok installed base-files base-files 13.6 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.37-1 install ok installed bsdutils bsdutils 1:2.40.2-13 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.89 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.21 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.2~rc1-2 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-11 install ok installed gpgv gpgv 2.2.45-2 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.2 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed lammps-examples lammps-examples 20240207+dfsg-3 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.19 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.2-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2 install ok installed libblkid1:amd64 libblkid1 2.40.2-13 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-4 install ok installed libc6:amd64 libc6 2.40-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.2~rc1-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.276 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2~rc1-2 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-11 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-7 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.8-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.51-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.2-13 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-3 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.44-5 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2 install ok installed libselinux1:amd64 libselinux1 3.7-3+b1 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2+b1 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-13 install ok installed libss2:amd64 libss2 1.47.2~rc1-2 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-11 install ok installed libsystemd0:amd64 libsystemd0 257.1-5 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libudev1:amd64 libudev1 257.1-5 install ok installed libunistring5:amd64 libunistring5 1.3-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-13 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed login login 1:4.16.0-2+really2.40.2-13 install ok installed login.defs login.defs 1:4.16.0-7 install ok installed logsave logsave 1.47.2~rc1-2 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-13 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed passwd passwd 1:4.16.0-7 install ok installed perl-base perl-base 5.40.0-8 install ok installed sed sed 4.9-2 install ok installed sqv sqv 1.2.1-5 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3.1 install ok installed tzdata tzdata 2024b-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-13 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', 'remove', 'lammps-examples'] 0m14.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: lammps-examples 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. After this operation, 222 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9013 files and directories currently installed.) Removing lammps-examples (20240207+dfsg-3) ... 0m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', 'remove', 'lammps-examples'] 0m14.8s INFO: Running scripts post_remove 0m14.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_remove_exceptions'] 0m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_remove_exceptions'] 0m14.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg', '--purge', 'lammps-examples'] 0m14.9s DUMP: dpkg: warning: ignoring request to remove lammps-examples which isn't installed 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg', '--purge', 'lammps-examples'] 0m14.9s INFO: Running scripts post_purge 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_purge_exceptions'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_purge_exceptions'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg', '--purge', '--pending'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg', '--purge', '--pending'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg', '--remove', '--pending'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg', '--remove', '--pending'] 0m14.9s INFO: Running scripts post_test 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_test_exceptions'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'tmp/scripts/post_test_exceptions'] 0m14.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m15.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m15.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg-divert', '--list'] 0m15.1s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m15.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'dpkg-divert', '--list'] 0m15.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', 'clean'] 0m15.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa', 'apt-get', 'clean'] 0m15.1s DEBUG: Recording chroot state 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/shm'] 0m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/shm'] 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/console'] 0m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/console'] 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/ptmx'] 0m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/ptmx'] 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/pts'] 0m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/dev/pts'] 0m15.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/proc'] 0m15.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa/proc'] 0m15.7s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m15.8s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpbddjfxqa'] 0m15.8s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpbddjfxqa 0m15.8s INFO: PASS: Upgrading between Debian distributions. 0m15.8s INFO: PASS: All tests. 0m15.8s INFO: piuparts run ends. ret=0 End: 2024-12-27 03:20:18 GMT