Start: 2022-08-16 07:09:55 GMT [testing] Package: lefse Version: 1.1.2-1 Installed-Size: 271 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3-biom-format, python3-matplotlib, python3-numpy, python3-rpy2, python3:any, r-cran-coin Description: determine features of organisms, clades, taxonomic units, genes Homepage: https://github.com/SegataLab/lefse Description-md5: 99a95edfdd51afd5bb9d222117f5342b Section: science Priority: optional Filename: pool/main/l/lefse/lefse_1.1.2-1_all.deb Size: 57484 MD5sum: 78eb728981966990f0457d0347b34788 SHA256: 2aa8a5dab75ece97b3e962812cf8eae8b0770bcdeab27e70bd0f6a72f03f4b8a [sid] Package: lefse Version: 1.1.2-1 Installed-Size: 271 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3-biom-format, python3-matplotlib, python3-numpy, python3-rpy2, python3:any, r-cran-coin Description: determine features of organisms, clades, taxonomic units, genes Homepage: https://github.com/SegataLab/lefse Description-md5: 99a95edfdd51afd5bb9d222117f5342b Section: science Priority: optional Filename: pool/main/l/lefse/lefse_1.1.2-1_all.deb Size: 57484 MD5sum: 78eb728981966990f0457d0347b34788 SHA256: 2aa8a5dab75ece97b3e962812cf8eae8b0770bcdeab27e70bd0f6a72f03f4b8a Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt lefse=1.1.2-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt lefse=1.1.2-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 4.19.0-21-amd64 #1 SMP Debian 4.19.249-2 (2022-06-30) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpwbqtecda 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpwbqtecda 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m1.6s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/proc'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/proc'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/pts'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/pts'] 0m1.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/ptmx'] 0m1.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/ptmx'] 0m1.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/console'] 0m1.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/console'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/shm'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/shm'] 0m1.6s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m1.6s DEBUG: Created policy-rc.d and chmodded it. 0m1.6s DEBUG: Created resolv.conf. 0m1.6s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpwbqtecda/tmp/scripts/ 0m1.6s INFO: Running scripts post_chroot_unpack 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', 'update'] 0m2.3s DUMP: Hit:1 http://deb.debian.org/debian bookworm InRelease Reading package lists... 0m2.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', 'update'] 0m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-yf', 'dist-upgrade'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.9s DUMP: 0643da3f1053dad523146c672cf02be3 - 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m2.9s INFO: Running scripts post_setup 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_dummy_users'] 0m3.6s DUMP: useradd warning: dummy1000's uid 1000 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1001's uid 1001 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1002's uid 1002 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1003's uid 1003 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1004's uid 1004 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1005's uid 1005 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1006's uid 1006 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1007's uid 1007 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1008's uid 1008 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1009's uid 1009 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. useradd warning: dummy1010's uid 1010 outside of the SYS_UID_MIN 101 and SYS_UID_MAX 999 range. 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_dummy_users'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_forbid_home'] 0m3.6s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_forbid_home'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.6s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_force-unsafe-io'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_minimize'] 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_minimize'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_squeeze-backports'] 0m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_zz_backports'] 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_setup_zz_backports'] 0m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.7s DUMP: install ok installed adduser adduser 3.123 install ok installed apt apt 2.5.2 install ok installed base-files base-files 12.2 install ok installed base-passwd base-passwd 3.5.52 install ok installed bash bash 5.1-6.1 install ok installed bsdutils bsdutils 1:2.38.1-1 install ok installed coreutils coreutils 8.32-4.1 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-8 install ok installed debconf debconf 1.5.79 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.3 install ok installed diffutils diffutils 1:3.7-5 install ok installed dpkg dpkg 1.21.9 install ok installed e2fsprogs e2fsprogs 1.46.5-2 install ok installed findutils findutils 4.9.0-3 install ok installed gcc-12-base:amd64 gcc-12-base 12.1.0-8 install ok installed gpgv gpgv 2.2.35-3 install ok installed grep grep 3.7-1 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.64 install ok installed libacl1:amd64 libacl1 2.3.1-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.2 install ok installed libattr1:amd64 libattr1 1:2.5.1-1 install ok installed libaudit-common libaudit-common 1:3.0.7-1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1+b1 install ok installed libblkid1:amd64 libblkid1 2.38.1-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5 install ok installed libc-bin libc-bin 2.34-3 install ok installed libc6:amd64 libc6 2.34-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b1 install ok installed libcap2:amd64 libcap2 1:2.44-1 install ok installed libcom-err2:amd64 libcom-err2 1.46.5-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.28-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.263 install ok installed libext2fs2:amd64 libext2fs2 1.46.5-2 install ok installed libffi8:amd64 libffi8 3.4.2-4 install ok installed libgcc-s1:amd64 libgcc-s1 12.1.0-8 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-2 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1 install ok installed libgnutls30:amd64 libgnutls30 3.7.7-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.45-2 install ok installed libhogweed6:amd64 libhogweed6 3.7.3-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1 install ok installed libmount1:amd64 libmount1 2.38.1-1 install ok installed libnettle8:amd64 libnettle8 3.7.3-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-13 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-13 install ok installed libpam-runtime libpam-runtime 1.4.0-13 install ok installed libpam0g:amd64 libpam0g 1.4.0-13 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-1 install ok installed libpcre3:amd64 libpcre3 2:8.39-14 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b1 install ok installed libselinux1:amd64 libselinux1 3.4-1+b1 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b1 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-1 install ok installed libss2:amd64 libss2 1.46.5-2 install ok installed libstdc++6:amd64 libstdc++6 12.1.0-8 install ok installed libsystemd0:amd64 libsystemd0 251.3-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.18.0-4 install ok installed libtinfo6:amd64 libtinfo6 6.3+20220423-2 install ok installed libudev1:amd64 libudev1 251.3-1 install ok installed libunistring2:amd64 libunistring2 1.0-1 install ok installed libuuid1:amd64 libuuid1 2.38.1-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg-1 install ok installed login login 1:4.11.1+dfsg1-2 install ok installed logsave logsave 1.46.5-2 install ok installed lsb-base lsb-base 11.2 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-1 install ok installed ncurses-base ncurses-base 6.3+20220423-2 install ok installed ncurses-bin ncurses-bin 6.3+20220423-2 install ok installed passwd passwd 1:4.11.1+dfsg1-2 install ok installed perl-base perl-base 5.34.0-5 install ok installed sed sed 4.8-1 install ok installed sgml-base sgml-base 1.30 install ok installed sysvinit-utils sysvinit-utils 3.04-1 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2022b-1 install ok installed util-linux util-linux 2.38.1-1 install ok installed util-linux-extra util-linux-extra 2.38.1-1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-4 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m3.7s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m3.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 0m4.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 0m4.0s INFO: Running scripts is_testable 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/is_testable_uninstallable'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/is_testable_uninstallable'] 0m4.0s INFO: Running scripts pre_test 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_test_exceptions'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_test_exceptions'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_test_root_password'] 0m4.0s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_test_root_password'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'show', '--no-all-versions', 'lefse'] 0m4.2s DUMP: Package: lefse Version: 1.1.2-1 Installed-Size: 271 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3-biom-format, python3-matplotlib, python3-numpy, python3-rpy2, python3:any, r-cran-coin Description-en: determine features of organisms, clades, taxonomic units, genes LEfSe (Linear discriminant analysis Effect Size) determines the features (organisms, clades, operational taxonomic units, genes, or functions) most likely to explain differences between classes by coupling standard tests for statistical significance with additional tests encoding biological consistency and effect relevance. Description-md5: 99a95edfdd51afd5bb9d222117f5342b Homepage: https://github.com/SegataLab/lefse Section: science Priority: optional Filename: pool/main/l/lefse/lefse_1.1.2-1_all.deb Size: 57484 MD5sum: 78eb728981966990f0457d0347b34788 SHA256: 2aa8a5dab75ece97b3e962812cf8eae8b0770bcdeab27e70bd0f6a72f03f4b8a 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'show', '--no-all-versions', 'lefse'] 0m4.2s INFO: apt-cache knows about the following packages: lefse 0m4.2s INFO: Running scripts pre_install 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_database-server'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_database-server'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_exceptions'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_exceptions'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_extras'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_extras'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy'] 0m4.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release o=Debian,a=testing,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy', 'lefse'] 0m4.3s DUMP: lefse: Installed: (none) Candidate: 1.1.2-1 Version table: 1.1.2-1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy', 'lefse'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-y', 'install', 'lefse'] 0m45.1s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: blt ca-certificates cython3 fontconfig fontconfig-config fonts-dejavu-core fonts-lyx libaec0 libblas3 libbrotli1 libbsd0 libcairo2 libcurl4 libdatrie1 libdeflate0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libice6 libicu71 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libldap-2.5-0 liblerc4 liblzf1 libmd0 libmpdec3 libncursesw6 libnghttp2-14 libnsl2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libqhull-r8.0 libquadmath0 libraqm0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libsqlite3-0 libssh2-1 libssl3 libsz2 libtcl8.6 libthai-data libthai0 libtiff5 libtirpc-common libtirpc3 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 libxt6 media-types openssl python-babel-localedata python-matplotlib-data python3 python3-appdirs python3-attr python3-babel python3-biom-format python3-brotli python3-cffi-backend python3-click python3-colorama python3-cycler python3-dateutil python3-decorator python3-fonttools python3-fs python3-h5py python3-h5py-serial python3-jinja2 python3-kiwisolver python3-lxml python3-lz4 python3-markupsafe python3-matplotlib python3-minimal python3-mpmath python3-munkres python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pkg-resources python3-pyparsing python3-pytz-deprecation-shim python3-rpy2 python3-scipy python3-six python3-sympy python3-tk python3-tz python3-tzlocal python3-ufolib2 python3-unicodedata2 python3.10 python3.10-minimal r-base-core r-cran-codetools r-cran-coin r-cran-lattice r-cran-libcoin r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-modeltools r-cran-multcomp r-cran-mvtnorm r-cran-sandwich r-cran-survival r-cran-th.data r-cran-zoo readline-common sensible-utils tk8.6-blt2.5 ucf unicode-data unzip x11-common xdg-utils zip Suggested packages: blt-demo cython-doc krb5-doc krb5-user libjs-jquery-ui-docs liblcms2-utils tcl8.6 tk8.6 python3-doc python3-venv python-attr-doc python-biom-format-doc python-cycler-doc python-h5py-doc python-jinja2-doc python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gcc gfortran python-numpy-doc python3-dev python3-pytest python-pandas-doc python3-statsmodels python-pil-doc python3-setuptools python-pyparsing-doc python-rpy-docs python-scipy-doc texlive-fonts-extra python-sympy-doc tix python3-tk-dbg python3.10-venv python3.10-doc binutils binfmt-support elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-xtable r-cran-e1071 r-cran-vcd r-cran-base64enc r-cran-ggplot2 r-cran-knitr r-cran-markdown r-cran-r.devices r-cran-r.rsp readline-doc Recommended packages: python3-dev gcc libglib2.0-data shared-mime-info xdg-user-dirs javascript-common krb5-locales libldap-common libgpm2 publicsuffix libsasl2-modules python3-bs4 python3-html5lib python3-bottleneck python3-numexpr python3-odf python3-openpyxl python3-xlwt python3-tables python3-numba python3-olefile g++ | c++-compiler isympy-common r-recommended r-base-dev r-doc-html r-cran-runit libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: blt ca-certificates cython3 fontconfig fontconfig-config fonts-dejavu-core fonts-lyx lefse libaec0 libblas3 libbrotli1 libbsd0 libcairo2 libcurl4 libdatrie1 libdeflate0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libice6 libicu71 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libldap-2.5-0 liblerc4 liblzf1 libmd0 libmpdec3 libncursesw6 libnghttp2-14 libnsl2 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libqhull-r8.0 libquadmath0 libraqm0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libsqlite3-0 libssh2-1 libssl3 libsz2 libtcl8.6 libthai-data libthai0 libtiff5 libtirpc-common libtirpc3 libtk8.6 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 libxt6 media-types openssl python-babel-localedata python-matplotlib-data python3 python3-appdirs python3-attr python3-babel python3-biom-format python3-brotli python3-cffi-backend python3-click python3-colorama python3-cycler python3-dateutil python3-decorator python3-fonttools python3-fs python3-h5py python3-h5py-serial python3-jinja2 python3-kiwisolver python3-lxml python3-lz4 python3-markupsafe python3-matplotlib python3-minimal python3-mpmath python3-munkres python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pkg-resources python3-pyparsing python3-pytz-deprecation-shim python3-rpy2 python3-scipy python3-six python3-sympy python3-tk python3-tz python3-tzlocal python3-ufolib2 python3-unicodedata2 python3.10 python3.10-minimal r-base-core r-cran-codetools r-cran-coin r-cran-lattice r-cran-libcoin r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-modeltools r-cran-multcomp r-cran-mvtnorm r-cran-sandwich r-cran-survival r-cran-th.data r-cran-zoo readline-common sensible-utils tk8.6-blt2.5 ucf unicode-data unzip x11-common xdg-utils zip 0 upgraded, 171 newly installed, 0 to remove and 0 not upgraded. Need to get 157 MB of archives. After this operation, 516 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.4-2 [2034 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libpython3.10-minimal amd64 3.10.6-1 [828 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.4.8-1 [109 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 python3.10-minimal amd64 3.10.6-1 [1993 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.10.5-3 [38.6 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 media-types all 8.0.0 [33.4 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 libncursesw6 amd64 6.3+20220423-2 [133 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20-1 [65.7 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20-1 [111 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-1 [15.7 kB] Get:12 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20-1 [363 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20-1 [166 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 libtirpc-common all 1.3.3+ds-1 [14.0 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.1.2-1.2 [73.9 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.1.2-1.2 [168 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.39.2-1 [838 kB] Get:20 http://deb.debian.org/debian bookworm/main amd64 libpython3.10-stdlib amd64 3.10.6-1 [1685 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 python3.10 amd64 3.10.6-1 [545 kB] Get:22 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.10.5-3 [21.7 kB] Get:23 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.10.5-3 [38.2 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.4-2 [1421 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20211016 [156 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 ucf all 3.0043 [74.0 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 libtcl8.6 amd64 8.6.12+dfsg-1 [1033 kB] Get:29 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b4 [275 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.37-5 [290 kB] Get:31 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-3 [420 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config all 2.13.1-4.4 [281 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.13.1-4.4 [350 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 libmd0 amd64 1.0.4-2 [29.5 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.6-1 [114 kB] Get:38 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:39 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:40 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.1-2 [308 kB] Get:41 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.1-2 [772 kB] Get:42 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get:43 http://deb.debian.org/debian bookworm/main amd64 libxft2 amd64 2.3.4-1 [57.4 kB] Get:44 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1 [53.1 kB] Get:45 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get:46 http://deb.debian.org/debian bookworm/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get:47 http://deb.debian.org/debian bookworm/main amd64 libtk8.6 amd64 8.6.12-1 [779 kB] Get:48 http://deb.debian.org/debian bookworm/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-4.1 [593 kB] Get:49 http://deb.debian.org/debian bookworm/main amd64 blt amd64 2.5.3+dfsg-4.1 [14.9 kB] Get:50 http://deb.debian.org/debian bookworm/main amd64 cython3 amd64 0.29.30-1+b1 [1305 kB] Get:51 http://deb.debian.org/debian bookworm/main amd64 fontconfig amd64 2.13.1-4.4 [417 kB] Get:52 http://deb.debian.org/debian bookworm/main amd64 fonts-lyx all 2.3.6.1-1 [206 kB] Get:53 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 59.6.0-1.2 [196 kB] Get:54 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.10.1-2 [156 kB] Get:55 http://deb.debian.org/debian bookworm/main amd64 libquadmath0 amd64 12.1.0-8 [145 kB] Get:56 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.1.0-8 [792 kB] Get:57 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.10.1-2 [2202 kB] Get:58 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.21.5-1+b1 [3227 kB] Get:59 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-6 [38.4 kB] Get:60 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-6 [77.3 kB] Get:61 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.12+dfsg-2+b1 [226 kB] Get:62 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.48.0-1 [83.4 kB] Get:63 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:64 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:65 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:66 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.84.0-2 [360 kB] Get:67 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1 [20.3 kB] Get:68 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1 [7492 B] Get:69 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.7+repack-4+b1 [1236 kB] Get:70 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.7+repack-4+b1 [84.4 kB] Get:71 http://deb.debian.org/debian bookworm/main amd64 liblzf1 amd64 3.6-3 [10.2 kB] Get:72 http://deb.debian.org/debian bookworm/main amd64 python3-h5py-serial amd64 3.7.0-2 [816 kB] Get:73 http://deb.debian.org/debian bookworm/main amd64 python3-h5py all 3.7.0-2 [13.3 kB] Get:74 http://deb.debian.org/debian bookworm/main amd64 python3-colorama all 0.4.5-1 [29.3 kB] Get:75 http://deb.debian.org/debian bookworm/main amd64 python3-click all 8.0.3-1 [91.9 kB] Get:76 http://deb.debian.org/debian bookworm/main amd64 python3-six all 1.16.0-4 [17.5 kB] Get:77 http://deb.debian.org/debian bookworm/main amd64 python3-dateutil all 2.8.1-6 [79.2 kB] Get:78 http://deb.debian.org/debian bookworm/main amd64 python3-tz all 2022.1-1 [34.8 kB] Get:79 http://deb.debian.org/debian bookworm/main amd64 python3-pandas-lib amd64 1.3.5+dfsg-5+b1 [3409 kB] Get:80 http://deb.debian.org/debian bookworm/main amd64 python3-pandas all 1.3.5+dfsg-5 [2654 kB] Get:81 http://deb.debian.org/debian bookworm/main amd64 python3-decorator all 4.4.2-2 [15.8 kB] Get:82 http://deb.debian.org/debian bookworm/main amd64 liblbfgsb0 amd64 3.0+dfsg.3-11 [28.6 kB] Get:83 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.7.3-2 [14.8 MB] Get:84 http://deb.debian.org/debian bookworm/main amd64 python3-biom-format amd64 2.1.12-1+b1 [131 kB] Get:85 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.0+dfsg+~3.5.13-1 [316 kB] Get:86 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:87 http://deb.debian.org/debian bookworm/main amd64 python-matplotlib-data all 3.5.2-2 [2741 kB] Get:88 http://deb.debian.org/debian bookworm/main amd64 libgomp1 amd64 12.1.0-8 [116 kB] Get:89 http://deb.debian.org/debian bookworm/main amd64 libimagequant0 amd64 2.17.0-1 [32.5 kB] Get:90 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.2-1 [164 kB] Get:91 http://deb.debian.org/debian bookworm/main amd64 liblcms2-2 amd64 2.13.1-1 [152 kB] Get:92 http://deb.debian.org/debian bookworm/main amd64 libopenjp2-7 amd64 2.5.0-1 [189 kB] Get:93 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get:94 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.72.3-1+b1 [1426 kB] Get:95 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:96 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 2.7.4-1+b1 [1469 kB] Get:97 http://deb.debian.org/debian bookworm/main amd64 libraqm0 amd64 0.7.0-4 [11.0 kB] Get:98 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.12-1 [71.6 kB] Get:99 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:100 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-1 [170 kB] Get:101 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.2-2+b1 [277 kB] Get:102 http://deb.debian.org/debian bookworm/main amd64 libtiff5 amd64 4.4.0-4 [314 kB] Get:103 http://deb.debian.org/debian bookworm/main amd64 libwebpdemux2 amd64 1.2.2-2+b1 [98.4 kB] Get:104 http://deb.debian.org/debian bookworm/main amd64 libwebpmux3 amd64 1.2.2-2+b1 [108 kB] Get:105 http://deb.debian.org/debian bookworm/main amd64 python3-pil amd64 9.2.0-1+b1 [467 kB] Get:106 http://deb.debian.org/debian bookworm/main amd64 python3-tk amd64 3.10.5-2 [116 kB] Get:107 http://deb.debian.org/debian bookworm/main amd64 python3-pil.imagetk amd64 9.2.0-1+b1 [79.1 kB] Get:108 http://deb.debian.org/debian bookworm/main amd64 python3-pyparsing all 3.0.7-2 [140 kB] Get:109 http://deb.debian.org/debian bookworm/main amd64 python3-cycler all 0.11.0-1 [8020 B] Get:110 http://deb.debian.org/debian bookworm/main amd64 python3-brotli amd64 1.0.9-2+b4 [280 kB] Get:111 http://deb.debian.org/debian bookworm/main amd64 python3-munkres all 1.1.4-3 [11.5 kB] Get:112 http://deb.debian.org/debian bookworm/main amd64 python3-attr all 22.1.0-1 [64.1 kB] Get:113 http://deb.debian.org/debian bookworm/main amd64 python3-ufolib2 all 0.13.1+dfsg1-1 [32.0 kB] Get:114 http://deb.debian.org/debian bookworm/main amd64 python3-mpmath all 1.2.1-2 [418 kB] Get:115 http://deb.debian.org/debian bookworm/main amd64 python3-sympy all 1.10.1-3 [4317 kB] Get:116 http://deb.debian.org/debian bookworm/main amd64 python3-appdirs all 1.4.4-2 [12.9 kB] Get:117 http://deb.debian.org/debian bookworm/main amd64 python3-fs all 2.4.16-1 [96.6 kB] Get:118 http://deb.debian.org/debian bookworm/main amd64 libicu71 amd64 71.1-3 [9218 kB] Get:119 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1+b1 [708 kB] Get:120 http://deb.debian.org/debian bookworm/main amd64 libxslt1.1 amd64 1.1.35-1 [242 kB] Get:121 http://deb.debian.org/debian bookworm/main amd64 python3-lxml amd64 4.9.1-1+b1 [1096 kB] Get:122 http://deb.debian.org/debian bookworm/main amd64 python3-lz4 amd64 4.0.0+dfsg-1+b1 [25.5 kB] Get:123 http://deb.debian.org/debian bookworm/main amd64 python3-unicodedata2 amd64 14.0.0+ds-8+b1 [296 kB] Get:124 http://deb.debian.org/debian bookworm/main amd64 unicode-data all 14.0.0-1.1 [7868 kB] Get:125 http://deb.debian.org/debian bookworm/main amd64 python3-fonttools amd64 4.34.4-1+b1 [822 kB] Get:126 http://deb.debian.org/debian bookworm/main amd64 python3-kiwisolver amd64 1.3.2-1+b2 [55.7 kB] Get:127 http://deb.debian.org/debian bookworm/main amd64 python3-packaging all 21.3-1 [34.1 kB] Get:128 http://deb.debian.org/debian bookworm/main amd64 libqhull-r8.0 amd64 2020.2-5 [248 kB] Get:129 http://deb.debian.org/debian bookworm/main amd64 python3-matplotlib amd64 3.5.2-2 [6661 kB] Get:130 http://deb.debian.org/debian bookworm/main amd64 python3-cffi-backend amd64 1.15.1-1 [87.1 kB] Get:131 http://deb.debian.org/debian bookworm/main amd64 python-babel-localedata all 2.8.0+dfsg.1-7 [4997 kB] Get:132 http://deb.debian.org/debian bookworm/main amd64 python3-babel all 2.8.0+dfsg.1-7 [100 kB] Get:133 http://deb.debian.org/debian bookworm/main amd64 python3-markupsafe amd64 2.0.1-2+b2 [13.9 kB] Get:134 http://deb.debian.org/debian bookworm/main amd64 python3-jinja2 all 3.0.3-1 [121 kB] Get:135 http://deb.debian.org/debian bookworm/main amd64 python3-pytz-deprecation-shim all 0.1.0.post0-2 [14.3 kB] Get:136 http://deb.debian.org/debian bookworm/main amd64 python3-tzlocal all 4.2-1 [24.6 kB] Get:137 http://deb.debian.org/debian bookworm/main amd64 zip amd64 3.0-12 [232 kB] Get:138 http://deb.debian.org/debian bookworm/main amd64 unzip amd64 6.0-27 [172 kB] Get:139 http://deb.debian.org/debian bookworm/main amd64 libpaper1 amd64 1.1.28+b1 [21.6 kB] Get:140 http://deb.debian.org/debian bookworm/main amd64 libpaper-utils amd64 1.1.28+b1 [18.3 kB] Get:141 http://deb.debian.org/debian bookworm/main amd64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get:142 http://deb.debian.org/debian bookworm/main amd64 libpixman-1-0 amd64 0.40.0-1 [543 kB] Get:143 http://deb.debian.org/debian bookworm/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get:144 http://deb.debian.org/debian bookworm/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get:145 http://deb.debian.org/debian bookworm/main amd64 libcairo2 amd64 1.16.0-6 [587 kB] Get:146 http://deb.debian.org/debian bookworm/main amd64 libthai-data all 0.1.29-1 [176 kB] Get:147 http://deb.debian.org/debian bookworm/main amd64 libdatrie1 amd64 0.2.13-2 [43.0 kB] Get:148 http://deb.debian.org/debian bookworm/main amd64 libthai0 amd64 0.1.29-1 [57.5 kB] Get:149 http://deb.debian.org/debian bookworm/main amd64 libpango-1.0-0 amd64 1.50.9+ds-1 [239 kB] Get:150 http://deb.debian.org/debian bookworm/main amd64 libpangoft2-1.0-0 amd64 1.50.9+ds-1 [75.3 kB] Get:151 http://deb.debian.org/debian bookworm/main amd64 libpangocairo-1.0-0 amd64 1.50.9+ds-1 [62.5 kB] Get:152 http://deb.debian.org/debian bookworm/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get:153 http://deb.debian.org/debian bookworm/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:154 http://deb.debian.org/debian bookworm/main amd64 libxt6 amd64 1:1.2.1-1 [189 kB] Get:155 http://deb.debian.org/debian bookworm/main amd64 r-base-core amd64 4.2.1-1 [28.0 MB] Get:156 http://deb.debian.org/debian bookworm/main amd64 python3-rpy2 amd64 3.5.3-1 [196 kB] Get:157 http://deb.debian.org/debian bookworm/main amd64 r-cran-lattice amd64 0.20-45-3 [1177 kB] Get:158 http://deb.debian.org/debian bookworm/main amd64 r-cran-matrix amd64 1.4-1-1 [4344 kB] Get:159 http://deb.debian.org/debian bookworm/main amd64 r-cran-survival amd64 3.4-0-1 [5803 kB] Get:160 http://deb.debian.org/debian bookworm/main amd64 r-cran-mvtnorm amd64 1.1-3-1 [222 kB] Get:161 http://deb.debian.org/debian bookworm/main amd64 r-cran-libcoin amd64 1.0-9-1 [935 kB] Get:162 http://deb.debian.org/debian bookworm/main amd64 r-cran-matrixstats amd64 0.62.0-1 [465 kB] Get:163 http://deb.debian.org/debian bookworm/main amd64 r-cran-modeltools all 0.2-23-2 [214 kB] Get:164 http://deb.debian.org/debian bookworm/main amd64 r-cran-mass amd64 7.3-58.1-1 [1122 kB] Get:165 http://deb.debian.org/debian bookworm/main amd64 r-cran-th.data all 1.1-1-1 [8783 kB] Get:166 http://deb.debian.org/debian bookworm/main amd64 r-cran-zoo amd64 1.8-10-1 [1011 kB] Get:167 http://deb.debian.org/debian bookworm/main amd64 r-cran-sandwich all 3.0-2-1 [1438 kB] Get:168 http://deb.debian.org/debian bookworm/main amd64 r-cran-codetools all 0.2-18-1 [91.8 kB] Get:169 http://deb.debian.org/debian bookworm/main amd64 r-cran-multcomp all 1.4-20-1 [712 kB] Get:170 http://deb.debian.org/debian bookworm/main amd64 r-cran-coin amd64 1.4-2-1 [1557 kB] Get:171 http://deb.debian.org/debian bookworm/main amd64 lefse all 1.1.2-1 [57.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 157 MB in 1s (252 MB/s) Selecting previously unselected package libssl3:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6610 files and directories currently installed.) Preparing to unpack .../libssl3_3.0.4-2_amd64.deb ... Unpacking libssl3:amd64 (3.0.4-2) ... Selecting previously unselected package libpython3.10-minimal:amd64. Preparing to unpack .../libpython3.10-minimal_3.10.6-1_amd64.deb ... Unpacking libpython3.10-minimal:amd64 (3.10.6-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.4.8-1_amd64.deb ... Unpacking libexpat1:amd64 (2.4.8-1) ... Selecting previously unselected package python3.10-minimal. Preparing to unpack .../python3.10-minimal_3.10.6-1_amd64.deb ... Unpacking python3.10-minimal (3.10.6-1) ... Setting up libssl3:amd64 (3.0.4-2) ... Setting up libpython3.10-minimal:amd64 (3.10.6-1) ... Setting up libexpat1:amd64 (2.4.8-1) ... Setting up python3.10-minimal (3.10.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6925 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.10.5-3_amd64.deb ... Unpacking python3-minimal (3.10.5-3) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_8.0.0_all.deb ... Unpacking media-types (8.0.0) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../02-libmpdec3_2.5.1-2_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-2) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../03-libncursesw6_6.3+20220423-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.3+20220423-2) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.20-1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../05-libk5crypto3_1.20-1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20-1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../06-libkeyutils1_1.6.3-1_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-1) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../07-libkrb5-3_1.20-1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20-1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../08-libgssapi-krb5-2_1.20-1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20-1) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../09-libtirpc-common_1.3.3+ds-1_all.deb ... Unpacking libtirpc-common (1.3.3+ds-1) ... Selecting previously unselected package libtirpc3:amd64. Preparing to unpack .../10-libtirpc3_1.3.3+ds-1_amd64.deb ... Unpacking libtirpc3:amd64 (1.3.3+ds-1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../11-libnsl2_1.3.0-2_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../12-readline-common_8.1.2-1.2_all.deb ... Unpacking readline-common (8.1.2-1.2) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../13-libreadline8_8.1.2-1.2_amd64.deb ... Unpacking libreadline8:amd64 (8.1.2-1.2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../14-libsqlite3-0_3.39.2-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.39.2-1) ... Selecting previously unselected package libpython3.10-stdlib:amd64. Preparing to unpack .../15-libpython3.10-stdlib_3.10.6-1_amd64.deb ... Unpacking libpython3.10-stdlib:amd64 (3.10.6-1) ... Selecting previously unselected package python3.10. Preparing to unpack .../16-python3.10_3.10.6-1_amd64.deb ... Unpacking python3.10 (3.10.6-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.10.5-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.10.5-3) ... Setting up python3-minimal (3.10.5-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7424 files and directories currently installed.) Preparing to unpack .../000-python3_3.10.5-3_amd64.deb ... Unpacking python3 (3.10.5-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.4-2_amd64.deb ... Unpacking openssl (3.0.4-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20211016_all.deb ... Unpacking ca-certificates (20211016) ... Selecting previously unselected package ucf. Preparing to unpack .../004-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libtcl8.6:amd64. Preparing to unpack .../005-libtcl8.6_8.6.12+dfsg-1_amd64.deb ... Unpacking libtcl8.6:amd64 (8.6.12+dfsg-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../006-libbrotli1_1.0.9-2+b4_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b4) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../007-libpng16-16_1.6.37-5_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.37-5) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../008-libfreetype6_2.12.1+dfsg-3_amd64.deb ... Unpacking libfreetype6:amd64 (2.12.1+dfsg-3) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../009-fonts-dejavu-core_2.37-2_all.deb ... Unpacking fonts-dejavu-core (2.37-2) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../010-fontconfig-config_2.13.1-4.4_all.deb ... Unpacking fontconfig-config (2.13.1-4.4) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../011-libfontconfig1_2.13.1-4.4_amd64.deb ... Unpacking libfontconfig1:amd64 (2.13.1-4.4) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../012-libxau6_1%3a1.0.9-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1) ... Selecting previously unselected package libmd0:amd64. Preparing to unpack .../013-libmd0_1.0.4-2_amd64.deb ... Unpacking libmd0:amd64 (1.0.4-2) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../014-libbsd0_0.11.6-1_amd64.deb ... Unpacking libbsd0:amd64 (0.11.6-1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../015-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../016-libxcb1_1.15-1_amd64.deb ... Unpacking libxcb1:amd64 (1.15-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../017-libx11-data_2%3a1.8.1-2_all.deb ... Unpacking libx11-data (2:1.8.1-2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../018-libx11-6_2%3a1.8.1-2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.1-2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../019-libxrender1_1%3a0.9.10-1.1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1.1) ... Selecting previously unselected package libxft2:amd64. Preparing to unpack .../020-libxft2_2.3.4-1_amd64.deb ... Unpacking libxft2:amd64 (2.3.4-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../021-libxext6_2%3a1.3.4-1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../022-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package libxss1:amd64. Preparing to unpack .../023-libxss1_1%3a1.2.3-1_amd64.deb ... Unpacking libxss1:amd64 (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:amd64. Preparing to unpack .../024-libtk8.6_8.6.12-1_amd64.deb ... Unpacking libtk8.6:amd64 (8.6.12-1) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../025-tk8.6-blt2.5_2.5.3+dfsg-4.1_amd64.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Selecting previously unselected package blt. Preparing to unpack .../026-blt_2.5.3+dfsg-4.1_amd64.deb ... Unpacking blt (2.5.3+dfsg-4.1) ... Selecting previously unselected package cython3. Preparing to unpack .../027-cython3_0.29.30-1+b1_amd64.deb ... Unpacking cython3 (0.29.30-1+b1) ... Selecting previously unselected package fontconfig. Preparing to unpack .../028-fontconfig_2.13.1-4.4_amd64.deb ... Unpacking fontconfig (2.13.1-4.4) ... Selecting previously unselected package fonts-lyx. Preparing to unpack .../029-fonts-lyx_2.3.6.1-1_all.deb ... Unpacking fonts-lyx (2.3.6.1-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../030-python3-pkg-resources_59.6.0-1.2_all.deb ... Unpacking python3-pkg-resources (59.6.0-1.2) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../031-libblas3_3.10.1-2_amd64.deb ... Unpacking libblas3:amd64 (3.10.1-2) ... Selecting previously unselected package libquadmath0:amd64. Preparing to unpack .../032-libquadmath0_12.1.0-8_amd64.deb ... Unpacking libquadmath0:amd64 (12.1.0-8) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../033-libgfortran5_12.1.0-8_amd64.deb ... Unpacking libgfortran5:amd64 (12.1.0-8) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../034-liblapack3_3.10.1-2_amd64.deb ... Unpacking liblapack3:amd64 (3.10.1-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../035-python3-numpy_1%3a1.21.5-1+b1_amd64.deb ... Unpacking python3-numpy (1:1.21.5-1+b1) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../036-libsasl2-modules-db_2.1.28+dfsg-6_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg-6) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../037-libsasl2-2_2.1.28+dfsg-6_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg-6) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../038-libldap-2.5-0_2.5.12+dfsg-2+b1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.12+dfsg-2+b1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../039-libnghttp2-14_1.48.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.48.0-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../040-libpsl5_0.21.0-1.2_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../041-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../042-libssh2-1_1.10.0-3+b1_amd64.deb ... Unpacking libssh2-1:amd64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../043-libcurl4_7.84.0-2_amd64.deb ... Unpacking libcurl4:amd64 (7.84.0-2) ... Selecting previously unselected package libaec0:amd64. Preparing to unpack .../044-libaec0_1.0.6-1_amd64.deb ... Unpacking libaec0:amd64 (1.0.6-1) ... Selecting previously unselected package libsz2:amd64. Preparing to unpack .../045-libsz2_1.0.6-1_amd64.deb ... Unpacking libsz2:amd64 (1.0.6-1) ... Selecting previously unselected package libhdf5-103-1:amd64. Preparing to unpack .../046-libhdf5-103-1_1.10.7+repack-4+b1_amd64.deb ... Unpacking libhdf5-103-1:amd64 (1.10.7+repack-4+b1) ... Selecting previously unselected package libhdf5-hl-100:amd64. Preparing to unpack .../047-libhdf5-hl-100_1.10.7+repack-4+b1_amd64.deb ... Unpacking libhdf5-hl-100:amd64 (1.10.7+repack-4+b1) ... Selecting previously unselected package liblzf1:amd64. Preparing to unpack .../048-liblzf1_3.6-3_amd64.deb ... Unpacking liblzf1:amd64 (3.6-3) ... Selecting previously unselected package python3-h5py-serial. Preparing to unpack .../049-python3-h5py-serial_3.7.0-2_amd64.deb ... Unpacking python3-h5py-serial (3.7.0-2) ... Selecting previously unselected package python3-h5py. Preparing to unpack .../050-python3-h5py_3.7.0-2_all.deb ... Unpacking python3-h5py (3.7.0-2) ... Selecting previously unselected package python3-colorama. Preparing to unpack .../051-python3-colorama_0.4.5-1_all.deb ... Unpacking python3-colorama (0.4.5-1) ... Selecting previously unselected package python3-click. Preparing to unpack .../052-python3-click_8.0.3-1_all.deb ... Unpacking python3-click (8.0.3-1) ... Selecting previously unselected package python3-six. Preparing to unpack .../053-python3-six_1.16.0-4_all.deb ... Unpacking python3-six (1.16.0-4) ... Selecting previously unselected package python3-dateutil. Preparing to unpack .../054-python3-dateutil_2.8.1-6_all.deb ... Unpacking python3-dateutil (2.8.1-6) ... Selecting previously unselected package python3-tz. Preparing to unpack .../055-python3-tz_2022.1-1_all.deb ... Unpacking python3-tz (2022.1-1) ... Selecting previously unselected package python3-pandas-lib:amd64. Preparing to unpack .../056-python3-pandas-lib_1.3.5+dfsg-5+b1_amd64.deb ... Unpacking python3-pandas-lib:amd64 (1.3.5+dfsg-5+b1) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../057-python3-pandas_1.3.5+dfsg-5_all.deb ... Unpacking python3-pandas (1.3.5+dfsg-5) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../058-python3-decorator_4.4.2-2_all.deb ... Unpacking python3-decorator (4.4.2-2) ... Selecting previously unselected package liblbfgsb0:amd64. Preparing to unpack .../059-liblbfgsb0_3.0+dfsg.3-11_amd64.deb ... Unpacking liblbfgsb0:amd64 (3.0+dfsg.3-11) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../060-python3-scipy_1.7.3-2_amd64.deb ... Unpacking python3-scipy (1.7.3-2) ... Selecting previously unselected package python3-biom-format. Preparing to unpack .../061-python3-biom-format_2.1.12-1+b1_amd64.deb ... Unpacking python3-biom-format (2.1.12-1+b1) ... Selecting previously unselected package libjs-jquery. Preparing to unpack .../062-libjs-jquery_3.6.0+dfsg+~3.5.13-1_all.deb ... Unpacking libjs-jquery (3.6.0+dfsg+~3.5.13-1) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../063-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... Selecting previously unselected package python-matplotlib-data. Preparing to unpack .../064-python-matplotlib-data_3.5.2-2_all.deb ... Unpacking python-matplotlib-data (3.5.2-2) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../065-libgomp1_12.1.0-8_amd64.deb ... Unpacking libgomp1:amd64 (12.1.0-8) ... Selecting previously unselected package libimagequant0:amd64. Preparing to unpack .../066-libimagequant0_2.17.0-1_amd64.deb ... Unpacking libimagequant0:amd64 (2.17.0-1) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../067-libjpeg62-turbo_1%3a2.1.2-1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.2-1) ... Selecting previously unselected package liblcms2-2:amd64. Preparing to unpack .../068-liblcms2-2_2.13.1-1_amd64.deb ... Unpacking liblcms2-2:amd64 (2.13.1-1) ... Selecting previously unselected package libopenjp2-7:amd64. Preparing to unpack .../069-libopenjp2-7_2.5.0-1_amd64.deb ... Unpacking libopenjp2-7:amd64 (2.5.0-1) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../070-libfribidi0_1.0.8-2.1_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.8-2.1) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../071-libglib2.0-0_2.72.3-1+b1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.72.3-1+b1) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../072-libgraphite2-3_1.3.14-1_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.14-1) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../073-libharfbuzz0b_2.7.4-1+b1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (2.7.4-1+b1) ... Selecting previously unselected package libraqm0:amd64. Preparing to unpack .../074-libraqm0_0.7.0-4_amd64.deb ... Unpacking libraqm0:amd64 (0.7.0-4) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../075-libdeflate0_1.12-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.12-1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../076-libjbig0_2.1-3.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1+b2) ... Selecting previously unselected package liblerc4:amd64. Preparing to unpack .../077-liblerc4_4.0.0+ds-1_amd64.deb ... Unpacking liblerc4:amd64 (4.0.0+ds-1) ... Selecting previously unselected package libwebp7:amd64. Preparing to unpack .../078-libwebp7_1.2.2-2+b1_amd64.deb ... Unpacking libwebp7:amd64 (1.2.2-2+b1) ... Selecting previously unselected package libtiff5:amd64. Preparing to unpack .../079-libtiff5_4.4.0-4_amd64.deb ... Unpacking libtiff5:amd64 (4.4.0-4) ... Selecting previously unselected package libwebpdemux2:amd64. Preparing to unpack .../080-libwebpdemux2_1.2.2-2+b1_amd64.deb ... Unpacking libwebpdemux2:amd64 (1.2.2-2+b1) ... Selecting previously unselected package libwebpmux3:amd64. Preparing to unpack .../081-libwebpmux3_1.2.2-2+b1_amd64.deb ... Unpacking libwebpmux3:amd64 (1.2.2-2+b1) ... Selecting previously unselected package python3-pil:amd64. Preparing to unpack .../082-python3-pil_9.2.0-1+b1_amd64.deb ... Unpacking python3-pil:amd64 (9.2.0-1+b1) ... Selecting previously unselected package python3-tk:amd64. Preparing to unpack .../083-python3-tk_3.10.5-2_amd64.deb ... Unpacking python3-tk:amd64 (3.10.5-2) ... Selecting previously unselected package python3-pil.imagetk:amd64. Preparing to unpack .../084-python3-pil.imagetk_9.2.0-1+b1_amd64.deb ... Unpacking python3-pil.imagetk:amd64 (9.2.0-1+b1) ... Selecting previously unselected package python3-pyparsing. Preparing to unpack .../085-python3-pyparsing_3.0.7-2_all.deb ... Unpacking python3-pyparsing (3.0.7-2) ... Selecting previously unselected package python3-cycler. Preparing to unpack .../086-python3-cycler_0.11.0-1_all.deb ... Unpacking python3-cycler (0.11.0-1) ... Selecting previously unselected package python3-brotli. Preparing to unpack .../087-python3-brotli_1.0.9-2+b4_amd64.deb ... Unpacking python3-brotli (1.0.9-2+b4) ... Selecting previously unselected package python3-munkres. Preparing to unpack .../088-python3-munkres_1.1.4-3_all.deb ... Unpacking python3-munkres (1.1.4-3) ... Selecting previously unselected package python3-attr. Preparing to unpack .../089-python3-attr_22.1.0-1_all.deb ... Unpacking python3-attr (22.1.0-1) ... Selecting previously unselected package python3-ufolib2. Preparing to unpack .../090-python3-ufolib2_0.13.1+dfsg1-1_all.deb ... Unpacking python3-ufolib2 (0.13.1+dfsg1-1) ... Selecting previously unselected package python3-mpmath. Preparing to unpack .../091-python3-mpmath_1.2.1-2_all.deb ... Unpacking python3-mpmath (1.2.1-2) ... Selecting previously unselected package python3-sympy. Preparing to unpack .../092-python3-sympy_1.10.1-3_all.deb ... Unpacking python3-sympy (1.10.1-3) ... Selecting previously unselected package python3-appdirs. Preparing to unpack .../093-python3-appdirs_1.4.4-2_all.deb ... Unpacking python3-appdirs (1.4.4-2) ... Selecting previously unselected package python3-fs. Preparing to unpack .../094-python3-fs_2.4.16-1_all.deb ... Unpacking python3-fs (2.4.16-1) ... Selecting previously unselected package libicu71:amd64. Preparing to unpack .../095-libicu71_71.1-3_amd64.deb ... Unpacking libicu71:amd64 (71.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../096-libxml2_2.9.14+dfsg-1+b1_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1+b1) ... Selecting previously unselected package libxslt1.1:amd64. Preparing to unpack .../097-libxslt1.1_1.1.35-1_amd64.deb ... Unpacking libxslt1.1:amd64 (1.1.35-1) ... Selecting previously unselected package python3-lxml:amd64. Preparing to unpack .../098-python3-lxml_4.9.1-1+b1_amd64.deb ... Unpacking python3-lxml:amd64 (4.9.1-1+b1) ... Selecting previously unselected package python3-lz4. Preparing to unpack .../099-python3-lz4_4.0.0+dfsg-1+b1_amd64.deb ... Unpacking python3-lz4 (4.0.0+dfsg-1+b1) ... Selecting previously unselected package python3-unicodedata2. Preparing to unpack .../100-python3-unicodedata2_14.0.0+ds-8+b1_amd64.deb ... Unpacking python3-unicodedata2 (14.0.0+ds-8+b1) ... Selecting previously unselected package unicode-data. Preparing to unpack .../101-unicode-data_14.0.0-1.1_all.deb ... Unpacking unicode-data (14.0.0-1.1) ... Selecting previously unselected package python3-fonttools. Preparing to unpack .../102-python3-fonttools_4.34.4-1+b1_amd64.deb ... Unpacking python3-fonttools (4.34.4-1+b1) ... Selecting previously unselected package python3-kiwisolver. Preparing to unpack .../103-python3-kiwisolver_1.3.2-1+b2_amd64.deb ... Unpacking python3-kiwisolver (1.3.2-1+b2) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../104-python3-packaging_21.3-1_all.deb ... Unpacking python3-packaging (21.3-1) ... Selecting previously unselected package libqhull-r8.0:amd64. Preparing to unpack .../105-libqhull-r8.0_2020.2-5_amd64.deb ... Unpacking libqhull-r8.0:amd64 (2020.2-5) ... Selecting previously unselected package python3-matplotlib. Preparing to unpack .../106-python3-matplotlib_3.5.2-2_amd64.deb ... Unpacking python3-matplotlib (3.5.2-2) ... Selecting previously unselected package python3-cffi-backend:amd64. Preparing to unpack .../107-python3-cffi-backend_1.15.1-1_amd64.deb ... Unpacking python3-cffi-backend:amd64 (1.15.1-1) ... Selecting previously unselected package python-babel-localedata. Preparing to unpack .../108-python-babel-localedata_2.8.0+dfsg.1-7_all.deb ... Unpacking python-babel-localedata (2.8.0+dfsg.1-7) ... Selecting previously unselected package python3-babel. Preparing to unpack .../109-python3-babel_2.8.0+dfsg.1-7_all.deb ... Unpacking python3-babel (2.8.0+dfsg.1-7) ... Selecting previously unselected package python3-markupsafe. Preparing to unpack .../110-python3-markupsafe_2.0.1-2+b2_amd64.deb ... Unpacking python3-markupsafe (2.0.1-2+b2) ... Selecting previously unselected package python3-jinja2. Preparing to unpack .../111-python3-jinja2_3.0.3-1_all.deb ... Unpacking python3-jinja2 (3.0.3-1) ... Selecting previously unselected package python3-pytz-deprecation-shim. Preparing to unpack .../112-python3-pytz-deprecation-shim_0.1.0.post0-2_all.deb ... Unpacking python3-pytz-deprecation-shim (0.1.0.post0-2) ... Selecting previously unselected package python3-tzlocal. Preparing to unpack .../113-python3-tzlocal_4.2-1_all.deb ... Unpacking python3-tzlocal (4.2-1) ... Selecting previously unselected package zip. Preparing to unpack .../114-zip_3.0-12_amd64.deb ... Unpacking zip (3.0-12) ... Selecting previously unselected package unzip. Preparing to unpack .../115-unzip_6.0-27_amd64.deb ... Unpacking unzip (6.0-27) ... Selecting previously unselected package libpaper1:amd64. Preparing to unpack .../116-libpaper1_1.1.28+b1_amd64.deb ... Unpacking libpaper1:amd64 (1.1.28+b1) ... Selecting previously unselected package libpaper-utils. Preparing to unpack .../117-libpaper-utils_1.1.28+b1_amd64.deb ... Unpacking libpaper-utils (1.1.28+b1) ... Selecting previously unselected package xdg-utils. Preparing to unpack .../118-xdg-utils_1.1.3-4.1_all.deb ... Unpacking xdg-utils (1.1.3-4.1) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../119-libpixman-1-0_0.40.0-1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.40.0-1) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../120-libxcb-render0_1.15-1_amd64.deb ... Unpacking libxcb-render0:amd64 (1.15-1) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../121-libxcb-shm0_1.15-1_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.15-1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../122-libcairo2_1.16.0-6_amd64.deb ... Unpacking libcairo2:amd64 (1.16.0-6) ... Selecting previously unselected package libthai-data. Preparing to unpack .../123-libthai-data_0.1.29-1_all.deb ... Unpacking libthai-data (0.1.29-1) ... Selecting previously unselected package libdatrie1:amd64. Preparing to unpack .../124-libdatrie1_0.2.13-2_amd64.deb ... Unpacking libdatrie1:amd64 (0.2.13-2) ... Selecting previously unselected package libthai0:amd64. Preparing to unpack .../125-libthai0_0.1.29-1_amd64.deb ... Unpacking libthai0:amd64 (0.1.29-1) ... Selecting previously unselected package libpango-1.0-0:amd64. Preparing to unpack .../126-libpango-1.0-0_1.50.9+ds-1_amd64.deb ... Unpacking libpango-1.0-0:amd64 (1.50.9+ds-1) ... Selecting previously unselected package libpangoft2-1.0-0:amd64. Preparing to unpack .../127-libpangoft2-1.0-0_1.50.9+ds-1_amd64.deb ... Unpacking libpangoft2-1.0-0:amd64 (1.50.9+ds-1) ... Selecting previously unselected package libpangocairo-1.0-0:amd64. Preparing to unpack .../128-libpangocairo-1.0-0_1.50.9+ds-1_amd64.deb ... Unpacking libpangocairo-1.0-0:amd64 (1.50.9+ds-1) ... Selecting previously unselected package libice6:amd64. Preparing to unpack .../129-libice6_2%3a1.0.10-1_amd64.deb ... Unpacking libice6:amd64 (2:1.0.10-1) ... Selecting previously unselected package libsm6:amd64. Preparing to unpack .../130-libsm6_2%3a1.2.3-1_amd64.deb ... Unpacking libsm6:amd64 (2:1.2.3-1) ... Selecting previously unselected package libxt6:amd64. Preparing to unpack .../131-libxt6_1%3a1.2.1-1_amd64.deb ... Unpacking libxt6:amd64 (1:1.2.1-1) ... Selecting previously unselected package r-base-core. Preparing to unpack .../132-r-base-core_4.2.1-1_amd64.deb ... Unpacking r-base-core (4.2.1-1) ... Selecting previously unselected package python3-rpy2. Preparing to unpack .../133-python3-rpy2_3.5.3-1_amd64.deb ... Unpacking python3-rpy2 (3.5.3-1) ... Selecting previously unselected package r-cran-lattice. Preparing to unpack .../134-r-cran-lattice_0.20-45-3_amd64.deb ... Unpacking r-cran-lattice (0.20-45-3) ... Selecting previously unselected package r-cran-matrix. Preparing to unpack .../135-r-cran-matrix_1.4-1-1_amd64.deb ... Unpacking r-cran-matrix (1.4-1-1) ... Selecting previously unselected package r-cran-survival. Preparing to unpack .../136-r-cran-survival_3.4-0-1_amd64.deb ... Unpacking r-cran-survival (3.4-0-1) ... Selecting previously unselected package r-cran-mvtnorm. Preparing to unpack .../137-r-cran-mvtnorm_1.1-3-1_amd64.deb ... Unpacking r-cran-mvtnorm (1.1-3-1) ... Selecting previously unselected package r-cran-libcoin. Preparing to unpack .../138-r-cran-libcoin_1.0-9-1_amd64.deb ... Unpacking r-cran-libcoin (1.0-9-1) ... Selecting previously unselected package r-cran-matrixstats. Preparing to unpack .../139-r-cran-matrixstats_0.62.0-1_amd64.deb ... Unpacking r-cran-matrixstats (0.62.0-1) ... Selecting previously unselected package r-cran-modeltools. Preparing to unpack .../140-r-cran-modeltools_0.2-23-2_all.deb ... Unpacking r-cran-modeltools (0.2-23-2) ... Selecting previously unselected package r-cran-mass. Preparing to unpack .../141-r-cran-mass_7.3-58.1-1_amd64.deb ... Unpacking r-cran-mass (7.3-58.1-1) ... Selecting previously unselected package r-cran-th.data. Preparing to unpack .../142-r-cran-th.data_1.1-1-1_all.deb ... Unpacking r-cran-th.data (1.1-1-1) ... Selecting previously unselected package r-cran-zoo. Preparing to unpack .../143-r-cran-zoo_1.8-10-1_amd64.deb ... Unpacking r-cran-zoo (1.8-10-1) ... Selecting previously unselected package r-cran-sandwich. Preparing to unpack .../144-r-cran-sandwich_3.0-2-1_all.deb ... Unpacking r-cran-sandwich (3.0-2-1) ... Selecting previously unselected package r-cran-codetools. Preparing to unpack .../145-r-cran-codetools_0.2-18-1_all.deb ... Unpacking r-cran-codetools (0.2-18-1) ... Selecting previously unselected package r-cran-multcomp. Preparing to unpack .../146-r-cran-multcomp_1.4-20-1_all.deb ... Unpacking r-cran-multcomp (1.4-20-1) ... Selecting previously unselected package r-cran-coin. Preparing to unpack .../147-r-cran-coin_1.4-2-1_amd64.deb ... Unpacking r-cran-coin (1.4-2-1) ... Selecting previously unselected package lefse. Preparing to unpack .../148-lefse_1.1.2-1_all.deb ... Unpacking lefse (1.1.2-1) ... Setting up media-types (8.0.0) ... Setting up libgraphite2-3:amd64 (1.3.14-1) ... Setting up liblcms2-2:amd64 (2.13.1-1) ... Setting up libpixman-1-0:amd64 (0.40.0-1) ... Setting up libicu71:amd64 (71.1-3) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libkeyutils1:amd64 (1.6.3-1) ... Setting up libpsl5:amd64 (0.21.0-1.2) ... Setting up liblerc4:amd64 (4.0.0+ds-1) ... Setting up libdatrie1:amd64 (0.2.13-2) ... Setting up libglib2.0-0:amd64 (2.72.3-1+b1) ... No schema files found: doing nothing. Setting up libtirpc-common (1.3.3+ds-1) ... Setting up fonts-lyx (2.3.6.1-1) ... Setting up unzip (6.0-27) ... Setting up libbrotli1:amd64 (1.0.9-2+b4) ... Setting up libsqlite3-0:amd64 (3.39.2-1) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libnghttp2-14:amd64 (1.48.0-1) ... Setting up libdeflate0:amd64 (1.12-1) ... Setting up libqhull-r8.0:amd64 (2020.2-5) ... Setting up libgomp1:amd64 (12.1.0-8) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libaec0:amd64 (1.0.6-1) ... Setting up python-babel-localedata (2.8.0+dfsg.1-7) ... Setting up libkrb5support0:amd64 (1.20-1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-6) ... Setting up unicode-data (14.0.0-1.1) ... Setting up zip (3.0-12) ... Setting up libblas3:amd64 (3.10.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.2-1) ... Setting up libx11-data (2:1.8.1-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up liblzf1:amd64 (3.6-3) ... Setting up libfribidi0:amd64 (1.0.8-2.1) ... Setting up libquadmath0:amd64 (12.1.0-8) ... Setting up libimagequant0:amd64 (2.17.0-1) ... Setting up libpng16-16:amd64 (1.6.37-5) ... Setting up libtcl8.6:amd64 (8.6.12+dfsg-1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libncursesw6:amd64 (6.3+20220423-2) ... Setting up libk5crypto3:amd64 (1.20-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-6) ... Setting up libgfortran5:amd64 (12.1.0-8) ... Setting up libwebp7:amd64 (1.2.2-2+b1) ... Setting up libmd0:amd64 (1.0.4-2) ... Setting up sensible-utils (0.0.17) ... Setting up libmpdec3:amd64 (2.5.1-2) ... Setting up libopenjp2-7:amd64 (2.5.0-1) ... Setting up libthai-data (0.1.29-1) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up libkrb5-3:amd64 (1.20-1) ... Setting up libtiff5:amd64 (4.4.0-4) ... Setting up libjs-jquery (3.6.0+dfsg+~3.5.13-1) ... Setting up python-matplotlib-data (3.5.2-2) ... Setting up openssl (3.0.4-2) ... Setting up libwebpmux3:amd64 (1.2.2-2+b1) ... Setting up libbsd0:amd64 (0.11.6-1) ... Setting up readline-common (8.1.2-1.2) ... Setting up libxml2:amd64 (2.9.14+dfsg-1+b1) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libsz2:amd64 (1.0.6-1) ... Setting up libice6:amd64 (2:1.0.10-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.10.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.15-1) ... Setting up libxcb-render0:amd64 (1.15-1) ... Setting up libwebpdemux2:amd64 (1.2.2-2+b1) ... Setting up libreadline8:amd64 (8.1.2-1.2) ... Setting up libxcb-shm0:amd64 (1.15-1) ... Setting up libldap-2.5-0:amd64 (2.5.12+dfsg-2+b1) ... Setting up libthai0:amd64 (0.1.29-1) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:amd64 (2.12.1+dfsg-3) ... Setting up libgssapi-krb5-2:amd64 (1.20-1) ... Setting up ucf (3.0043) ... Setting up libxslt1.1:amd64 (1.1.35-1) ... Setting up libcurl4:amd64 (7.84.0-2) ... Setting up libx11-6:amd64 (2:1.8.1-2) ... Setting up libharfbuzz0b:amd64 (2.7.4-1+b1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.3-11) ... Setting up libtirpc3:amd64 (1.3.3+ds-1) ... Setting up libpaper1:amd64 (1.1.28+b1) ... Creating config file /etc/papersize with new version Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up fontconfig-config (2.13.1-4.4) ... Setting up libxext6:amd64 (2:1.3.4-1) ... Setting up libpaper-utils (1.1.28+b1) ... Setting up libraqm0:amd64 (0.7.0-4) ... Setting up libxt6:amd64 (1:1.2.1-1) ... Setting up libhdf5-103-1:amd64 (1.10.7+repack-4+b1) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libhdf5-hl-100:amd64 (1.10.7+repack-4+b1) ... Setting up libpython3.10-stdlib:amd64 (3.10.6-1) ... Setting up libpython3-stdlib:amd64 (3.10.5-3) ... Setting up python3.10 (3.10.6-1) ... Setting up python3 (3.10.5-3) ... Setting up python3-markupsafe (2.0.1-2+b2) ... Setting up python3-tz (2022.1-1) ... Setting up python3-six (1.16.0-4) ... Setting up python3-decorator (4.4.2-2) ... Setting up python3-pyparsing (3.0.7-2) ... Setting up python3-brotli (1.0.9-2+b4) ... Setting up python3-cycler (0.11.0-1) ... Setting up python3-kiwisolver (1.3.2-1+b2) ... Setting up cython3 (0.29.30-1+b1) ... Setting up python3-lxml:amd64 (4.9.1-1+b1) ... Setting up python3-munkres (1.1.4-3) ... Setting up python3-dateutil (2.8.1-6) ... Setting up python3-mpmath (1.2.1-2) ... Setting up python3-appdirs (1.4.4-2) ... Setting up python3-cffi-backend:amd64 (1.15.1-1) ... Setting up python3-pkg-resources (59.6.0-1.2) ... Setting up python3-sympy (1.10.1-3) ... Setting up python3-attr (22.1.0-1) ... Setting up python3-babel (2.8.0+dfsg.1-7) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-colorama (0.4.5-1) ... Setting up python3-lz4 (4.0.0+dfsg-1+b1) ... Setting up python3-pytz-deprecation-shim (0.1.0.post0-2) ... Setting up python3-unicodedata2 (14.0.0+ds-8+b1) ... Setting up python3-click (8.0.3-1) ... Setting up python3-fs (2.4.16-1) ... Setting up python3-jinja2 (3.0.3-1) ... Setting up python3-packaging (21.3-1) ... Setting up python3-numpy (1:1.21.5-1+b1) ... Setting up python3-tzlocal (4.2-1) ... Setting up python3-scipy (1.7.3-2) ... Setting up python3-pandas-lib:amd64 (1.3.5+dfsg-5+b1) ... Setting up python3-h5py-serial (3.7.0-2) ... Setting up python3-pandas (1.3.5+dfsg-5) ... Setting up python3-h5py (3.7.0-2) ... Setting up python3-biom-format (2.1.12-1+b1) ... Setting up python3-ufolib2 (0.13.1+dfsg1-1) ... Setting up python3-fonttools (4.34.4-1+b1) ... Processing triggers for sgml-base (1.30) ... Setting up libfontconfig1:amd64 (2.13.1-4.4) ... Setting up fontconfig (2.13.1-4.4) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.4-1) ... Setting up libtk8.6:amd64 (8.6.12-1) ... Processing triggers for libc-bin (2.34-3) ... Setting up libpango-1.0-0:amd64 (1.50.9+ds-1) ... Setting up libcairo2:amd64 (1.16.0-6) ... Setting up libpangoft2-1.0-0:amd64 (1.50.9+ds-1) ... Setting up libpangocairo-1.0-0:amd64 (1.50.9+ds-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Setting up blt (2.5.3+dfsg-4.1) ... Setting up python3-tk:amd64 (3.10.5-2) ... Setting up python3-pil.imagetk:amd64 (9.2.0-1+b1) ... Setting up r-base-core (4.2.1-1) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-lattice (0.20-45-3) ... Setting up r-cran-modeltools (0.2-23-2) ... Setting up python3-rpy2 (3.5.3-1) ... Setting up r-cran-codetools (0.2-18-1) ... Setting up r-cran-matrixstats (0.62.0-1) ... Setting up r-cran-mass (7.3-58.1-1) ... Setting up python3-pil:amd64 (9.2.0-1+b1) ... Setting up r-cran-mvtnorm (1.1-3-1) ... Setting up r-cran-zoo (1.8-10-1) ... Setting up r-cran-matrix (1.4-1-1) ... Setting up r-cran-libcoin (1.0-9-1) ... Setting up python3-matplotlib (3.5.2-2) ... Setting up r-cran-sandwich (3.0-2-1) ... Setting up r-cran-survival (3.4-0-1) ... Setting up r-cran-th.data (1.1-1-1) ... Setting up r-cran-multcomp (1.4-20-1) ... Setting up r-cran-coin (1.4-2-1) ... Setting up lefse (1.1.2-1) ... Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for libc-bin (2.34-3) ... 0m45.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-y', 'install', 'lefse'] 0m45.1s INFO: Running scripts post_install 0m45.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_install_exceptions'] 0m45.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_install_exceptions'] 0m45.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 0m46.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 0m46.0s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpwbqtecda to sid 0m46.0s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m46.0s INFO: Running scripts pre_distupgrade 0m46.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m46.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m46.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_exceptions'] 0m46.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_exceptions'] 0m46.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m46.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m46.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m46.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m46.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m46.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m46.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', 'update'] 0m49.1s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [192 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9313 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6882 kB] Fetched 16.4 MB in 2s (6876 kB/s) Reading package lists... 0m49.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', 'update'] 0m49.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-yf', 'dist-upgrade'] 1m24.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-12 g++ g++-12 gcc gcc-11-base gcc-12 libasan6 libasan8 libatomic1 libbinutils libboost-dev libboost1.74-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libexpat1-dev libgcc-11-dev libgcc-12-dev libgprofng0 libisl23 libitm1 libjs-sphinxdoc libjs-underscore liblsan0 libmpc3 libmpfr6 libnsl-dev libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libpython3-all-dev libpython3-dev libpython3.10 libpython3.10-dev libstdc++-11-dev libstdc++-12-dev libtirpc-dev libtsan0 libtsan2 libubsan1 libxsimd-dev linux-libc-dev python3-all python3-all-dev python3-beniget python3-dev python3-distutils python3-gast python3-lib2to3 python3-ply python3-pythran python3.10-dev rpcsvc-proto zlib1g-dev The following packages will be upgraded: diffutils libhogweed6 libnettle8 libpython3-stdlib libssl3 libsystemd0 libudev1 openssl python3 python3-decorator python3-minimal python3-scipy python3-tk python3-tz r-base-core 15 upgraded, 62 newly installed, 0 to remove and 0 not upgraded. Need to get 293 MB of archives. After this operation, 1060 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 diffutils amd64 1:3.8-1 [387 kB] Get:2 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.10.6-1 [38.7 kB] Get:3 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.10.6-1 [38.2 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.10.6-1 [21.7 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libnettle8 amd64 3.8.1-2 [288 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libhogweed6 amd64 3.8.1-2 [328 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 251.4-1 [410 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 251.4-1 [183 kB] Get:9 http://deb.debian.org/debian sid/main amd64 binutils-common amd64 2.38.90.20220713-2 [2314 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libbinutils amd64 2.38.90.20220713-2 [589 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libctf-nobfd0 amd64 2.38.90.20220713-2 [159 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libctf0 amd64 2.38.90.20220713-2 [95.9 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libgprofng0 amd64 2.38.90.20220713-2 [872 kB] Get:14 http://deb.debian.org/debian sid/main amd64 binutils-x86-64-linux-gnu amd64 2.38.90.20220713-2 [2309 kB] Get:15 http://deb.debian.org/debian sid/main amd64 binutils amd64 2.38.90.20220713-2 [63.7 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libisl23 amd64 0.25-1 [690 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libmpfr6 amd64 4.1.0-3 [2012 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libmpc3 amd64 1.2.1-2 [44.6 kB] Get:19 http://deb.debian.org/debian sid/main amd64 cpp-12 amd64 12.1.0-8 [57.0 MB] Get:20 http://deb.debian.org/debian sid/main amd64 cpp amd64 4:12.1.0-3 [20.0 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libcc1-0 amd64 12.1.0-8 [41.7 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libitm1 amd64 12.1.0-8 [26.1 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 12.1.0-8 [9320 B] Get:24 http://deb.debian.org/debian sid/main amd64 libasan8 amd64 12.1.0-8 [2194 kB] Get:25 http://deb.debian.org/debian sid/main amd64 liblsan0 amd64 12.1.0-8 [969 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libtsan2 amd64 12.1.0-8 [2197 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libubsan1 amd64 12.1.0-8 [883 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libgcc-12-dev amd64 12.1.0-8 [2437 kB] Get:29 http://deb.debian.org/debian sid/main amd64 gcc-12 amd64 12.1.0-8 [65.2 MB] Get:30 http://deb.debian.org/debian sid/main amd64 gcc amd64 4:12.1.0-3 [5192 B] Get:31 http://deb.debian.org/debian sid/main amd64 libc-dev-bin amd64 2.34-3 [246 kB] Get:32 http://deb.debian.org/debian sid/main amd64 linux-libc-dev amd64 5.18.16-1 [1617 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libcrypt-dev amd64 1:4.4.28-2 [118 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libtirpc-dev amd64 1.3.3+ds-1 [191 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:36 http://deb.debian.org/debian sid/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libc6-dev amd64 2.34-3 [1895 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libstdc++-12-dev amd64 12.1.0-8 [2045 kB] Get:39 http://deb.debian.org/debian sid/main amd64 g++-12 amd64 12.1.0-8 [61.5 MB] Get:40 http://deb.debian.org/debian sid/main amd64 g++ amd64 4:12.1.0-3 [1644 B] Get:41 http://deb.debian.org/debian sid/main amd64 gcc-11-base amd64 11.3.0-5 [209 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libasan6 amd64 11.3.0-5 [2050 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libtsan0 amd64 11.3.0-5 [2017 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libgcc-11-dev amd64 11.3.0-5 [2361 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libstdc++-11-dev amd64 11.3.0-5 [1970 kB] Get:46 http://deb.debian.org/debian sid/main amd64 libboost1.74-dev amd64 1.74.0-16.1+b1 [9541 kB] Get:47 http://deb.debian.org/debian sid/main amd64 libboost-dev amd64 1.74.0.3 [4548 B] Get:48 http://deb.debian.org/debian sid/main amd64 libexpat1-dev amd64 2.4.8-1 [159 kB] Get:49 http://deb.debian.org/debian sid/main amd64 libjs-underscore all 1.13.3~dfsg+~1.11.4-1 [116 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libjs-sphinxdoc all 4.5.0-4 [142 kB] Get:51 http://deb.debian.org/debian sid/main amd64 libopenblas0-pthread amd64 0.3.20+ds-2 [6306 kB] Get:52 http://deb.debian.org/debian sid/main amd64 libopenblas0 amd64 0.3.20+ds-2 [37.0 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libopenblas-pthread-dev amd64 0.3.20+ds-2 [4476 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libopenblas-dev amd64 0.3.20+ds-2 [49.1 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libpython3.10 amd64 3.10.6-1 [1752 kB] Get:56 http://deb.debian.org/debian sid/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-4 [191 kB] Get:57 http://deb.debian.org/debian sid/main amd64 libpython3.10-dev amd64 3.10.6-1 [4119 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libpython3-dev amd64 3.10.6-1 [22.0 kB] Get:59 http://deb.debian.org/debian sid/main amd64 libpython3-all-dev amd64 3.10.6-1 [1068 B] Get:60 http://deb.debian.org/debian sid/main amd64 libssl3 amd64 3.0.5-2 [2030 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libxsimd-dev amd64 8.1.0-7 [88.8 kB] Get:62 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.0.5-2 [1421 kB] Get:63 http://deb.debian.org/debian sid/main amd64 python3-lib2to3 all 3.10.6-1 [79.9 kB] Get:64 http://deb.debian.org/debian sid/main amd64 python3-distutils all 3.10.6-1 [141 kB] Get:65 http://deb.debian.org/debian sid/main amd64 python3-all amd64 3.10.6-1 [1060 B] Get:66 http://deb.debian.org/debian sid/main amd64 python3.10-dev amd64 3.10.6-1 [508 kB] Get:67 http://deb.debian.org/debian sid/main amd64 python3-dev amd64 3.10.6-1 [25.4 kB] Get:68 http://deb.debian.org/debian sid/main amd64 python3-all-dev amd64 3.10.6-1 [1068 B] Get:69 http://deb.debian.org/debian sid/main amd64 python3-gast all 0.5.2-2 [9364 B] Get:70 http://deb.debian.org/debian sid/main amd64 python3-beniget all 0.4.1-2 [9808 B] Get:71 http://deb.debian.org/debian sid/main amd64 python3-decorator all 5.1.1-2 [16.5 kB] Get:72 http://deb.debian.org/debian sid/main amd64 python3-ply all 3.11-5 [65.8 kB] Get:73 http://deb.debian.org/debian sid/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB] Get:74 http://deb.debian.org/debian sid/main amd64 python3-scipy amd64 1.8.1-8 [14.5 MB] Get:75 http://deb.debian.org/debian sid/main amd64 python3-tk amd64 3.10.6-1 [109 kB] Get:76 http://deb.debian.org/debian sid/main amd64 python3-tz all 2022.2.1-1 [34.8 kB] Get:77 http://deb.debian.org/debian sid/main amd64 r-base-core amd64 4.2.1-2 [28.1 MB] debconf: delaying package configuration, since apt-utils is not installed Fetched 293 MB in 2s (181 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20842 files and directories currently installed.) Preparing to unpack .../diffutils_1%3a3.8-1_amd64.deb ... Unpacking diffutils (1:3.8-1) over (1:3.7-5) ... Setting up diffutils (1:3.8-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20842 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.10.6-1_amd64.deb ... Unpacking python3-minimal (3.10.6-1) over (3.10.5-3) ... Setting up python3-minimal (3.10.6-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20842 files and directories currently installed.) Preparing to unpack .../python3_3.10.6-1_amd64.deb ... Unpacking python3 (3.10.6-1) over (3.10.5-3) ... Preparing to unpack .../libpython3-stdlib_3.10.6-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.10.6-1) over (3.10.5-3) ... Preparing to unpack .../libnettle8_3.8.1-2_amd64.deb ... Unpacking libnettle8:amd64 (3.8.1-2) over (3.7.3-1) ... Setting up libnettle8:amd64 (3.8.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20842 files and directories currently installed.) Preparing to unpack .../libhogweed6_3.8.1-2_amd64.deb ... Unpacking libhogweed6:amd64 (3.8.1-2) over (3.7.3-1) ... Setting up libhogweed6:amd64 (3.8.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20842 files and directories currently installed.) Preparing to unpack .../libsystemd0_251.4-1_amd64.deb ... Unpacking libsystemd0:amd64 (251.4-1) over (251.3-1) ... Setting up libsystemd0:amd64 (251.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20842 files and directories currently installed.) Preparing to unpack .../libudev1_251.4-1_amd64.deb ... Unpacking libudev1:amd64 (251.4-1) over (251.3-1) ... Setting up libudev1:amd64 (251.4-1) ... Selecting previously unselected package binutils-common:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20842 files and directories currently installed.) Preparing to unpack .../00-binutils-common_2.38.90.20220713-2_amd64.deb ... Unpacking binutils-common:amd64 (2.38.90.20220713-2) ... Selecting previously unselected package libbinutils:amd64. Preparing to unpack .../01-libbinutils_2.38.90.20220713-2_amd64.deb ... Unpacking libbinutils:amd64 (2.38.90.20220713-2) ... Selecting previously unselected package libctf-nobfd0:amd64. Preparing to unpack .../02-libctf-nobfd0_2.38.90.20220713-2_amd64.deb ... Unpacking libctf-nobfd0:amd64 (2.38.90.20220713-2) ... Selecting previously unselected package libctf0:amd64. Preparing to unpack .../03-libctf0_2.38.90.20220713-2_amd64.deb ... Unpacking libctf0:amd64 (2.38.90.20220713-2) ... Selecting previously unselected package libgprofng0:amd64. Preparing to unpack .../04-libgprofng0_2.38.90.20220713-2_amd64.deb ... Unpacking libgprofng0:amd64 (2.38.90.20220713-2) ... Selecting previously unselected package binutils-x86-64-linux-gnu. Preparing to unpack .../05-binutils-x86-64-linux-gnu_2.38.90.20220713-2_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.38.90.20220713-2) ... Selecting previously unselected package binutils. Preparing to unpack .../06-binutils_2.38.90.20220713-2_amd64.deb ... Unpacking binutils (2.38.90.20220713-2) ... Selecting previously unselected package libisl23:amd64. Preparing to unpack .../07-libisl23_0.25-1_amd64.deb ... Unpacking libisl23:amd64 (0.25-1) ... Selecting previously unselected package libmpfr6:amd64. Preparing to unpack .../08-libmpfr6_4.1.0-3_amd64.deb ... Unpacking libmpfr6:amd64 (4.1.0-3) ... Selecting previously unselected package libmpc3:amd64. Preparing to unpack .../09-libmpc3_1.2.1-2_amd64.deb ... Unpacking libmpc3:amd64 (1.2.1-2) ... Selecting previously unselected package cpp-12. Preparing to unpack .../10-cpp-12_12.1.0-8_amd64.deb ... Unpacking cpp-12 (12.1.0-8) ... Selecting previously unselected package cpp. Preparing to unpack .../11-cpp_4%3a12.1.0-3_amd64.deb ... Unpacking cpp (4:12.1.0-3) ... Selecting previously unselected package libcc1-0:amd64. Preparing to unpack .../12-libcc1-0_12.1.0-8_amd64.deb ... Unpacking libcc1-0:amd64 (12.1.0-8) ... Selecting previously unselected package libitm1:amd64. Preparing to unpack .../13-libitm1_12.1.0-8_amd64.deb ... Unpacking libitm1:amd64 (12.1.0-8) ... Selecting previously unselected package libatomic1:amd64. Preparing to unpack .../14-libatomic1_12.1.0-8_amd64.deb ... Unpacking libatomic1:amd64 (12.1.0-8) ... Selecting previously unselected package libasan8:amd64. Preparing to unpack .../15-libasan8_12.1.0-8_amd64.deb ... Unpacking libasan8:amd64 (12.1.0-8) ... Selecting previously unselected package liblsan0:amd64. Preparing to unpack .../16-liblsan0_12.1.0-8_amd64.deb ... Unpacking liblsan0:amd64 (12.1.0-8) ... Selecting previously unselected package libtsan2:amd64. Preparing to unpack .../17-libtsan2_12.1.0-8_amd64.deb ... Unpacking libtsan2:amd64 (12.1.0-8) ... Selecting previously unselected package libubsan1:amd64. Preparing to unpack .../18-libubsan1_12.1.0-8_amd64.deb ... Unpacking libubsan1:amd64 (12.1.0-8) ... Selecting previously unselected package libgcc-12-dev:amd64. Preparing to unpack .../19-libgcc-12-dev_12.1.0-8_amd64.deb ... Unpacking libgcc-12-dev:amd64 (12.1.0-8) ... Selecting previously unselected package gcc-12. Preparing to unpack .../20-gcc-12_12.1.0-8_amd64.deb ... Unpacking gcc-12 (12.1.0-8) ... Selecting previously unselected package gcc. Preparing to unpack .../21-gcc_4%3a12.1.0-3_amd64.deb ... Unpacking gcc (4:12.1.0-3) ... Selecting previously unselected package libc-dev-bin. Preparing to unpack .../22-libc-dev-bin_2.34-3_amd64.deb ... Unpacking libc-dev-bin (2.34-3) ... Selecting previously unselected package linux-libc-dev:amd64. Preparing to unpack .../23-linux-libc-dev_5.18.16-1_amd64.deb ... Unpacking linux-libc-dev:amd64 (5.18.16-1) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../24-libcrypt-dev_1%3a4.4.28-2_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.28-2) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../25-libtirpc-dev_1.3.3+ds-1_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.3+ds-1) ... Selecting previously unselected package libnsl-dev:amd64. Preparing to unpack .../26-libnsl-dev_1.3.0-2_amd64.deb ... Unpacking libnsl-dev:amd64 (1.3.0-2) ... Selecting previously unselected package rpcsvc-proto. Preparing to unpack .../27-rpcsvc-proto_1.4.2-4_amd64.deb ... Unpacking rpcsvc-proto (1.4.2-4) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../28-libc6-dev_2.34-3_amd64.deb ... Unpacking libc6-dev:amd64 (2.34-3) ... Selecting previously unselected package libstdc++-12-dev:amd64. Preparing to unpack .../29-libstdc++-12-dev_12.1.0-8_amd64.deb ... Unpacking libstdc++-12-dev:amd64 (12.1.0-8) ... Selecting previously unselected package g++-12. Preparing to unpack .../30-g++-12_12.1.0-8_amd64.deb ... Unpacking g++-12 (12.1.0-8) ... Selecting previously unselected package g++. Preparing to unpack .../31-g++_4%3a12.1.0-3_amd64.deb ... Unpacking g++ (4:12.1.0-3) ... Selecting previously unselected package gcc-11-base:amd64. Preparing to unpack .../32-gcc-11-base_11.3.0-5_amd64.deb ... Unpacking gcc-11-base:amd64 (11.3.0-5) ... Selecting previously unselected package libasan6:amd64. Preparing to unpack .../33-libasan6_11.3.0-5_amd64.deb ... Unpacking libasan6:amd64 (11.3.0-5) ... Selecting previously unselected package libtsan0:amd64. Preparing to unpack .../34-libtsan0_11.3.0-5_amd64.deb ... Unpacking libtsan0:amd64 (11.3.0-5) ... Selecting previously unselected package libgcc-11-dev:amd64. Preparing to unpack .../35-libgcc-11-dev_11.3.0-5_amd64.deb ... Unpacking libgcc-11-dev:amd64 (11.3.0-5) ... Selecting previously unselected package libstdc++-11-dev:amd64. Preparing to unpack .../36-libstdc++-11-dev_11.3.0-5_amd64.deb ... Unpacking libstdc++-11-dev:amd64 (11.3.0-5) ... Selecting previously unselected package libboost1.74-dev:amd64. Preparing to unpack .../37-libboost1.74-dev_1.74.0-16.1+b1_amd64.deb ... Unpacking libboost1.74-dev:amd64 (1.74.0-16.1+b1) ... Selecting previously unselected package libboost-dev:amd64. Preparing to unpack .../38-libboost-dev_1.74.0.3_amd64.deb ... Unpacking libboost-dev:amd64 (1.74.0.3) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../39-libexpat1-dev_2.4.8-1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.4.8-1) ... Selecting previously unselected package libjs-underscore. Preparing to unpack .../40-libjs-underscore_1.13.3~dfsg+~1.11.4-1_all.deb ... Unpacking libjs-underscore (1.13.3~dfsg+~1.11.4-1) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../41-libjs-sphinxdoc_4.5.0-4_all.deb ... Unpacking libjs-sphinxdoc (4.5.0-4) ... Selecting previously unselected package libopenblas0-pthread:amd64. Preparing to unpack .../42-libopenblas0-pthread_0.3.20+ds-2_amd64.deb ... Unpacking libopenblas0-pthread:amd64 (0.3.20+ds-2) ... Selecting previously unselected package libopenblas0:amd64. Preparing to unpack .../43-libopenblas0_0.3.20+ds-2_amd64.deb ... Unpacking libopenblas0:amd64 (0.3.20+ds-2) ... Selecting previously unselected package libopenblas-pthread-dev:amd64. Preparing to unpack .../44-libopenblas-pthread-dev_0.3.20+ds-2_amd64.deb ... Unpacking libopenblas-pthread-dev:amd64 (0.3.20+ds-2) ... Selecting previously unselected package libopenblas-dev:amd64. Preparing to unpack .../45-libopenblas-dev_0.3.20+ds-2_amd64.deb ... Unpacking libopenblas-dev:amd64 (0.3.20+ds-2) ... Selecting previously unselected package libpython3.10:amd64. Preparing to unpack .../46-libpython3.10_3.10.6-1_amd64.deb ... Unpacking libpython3.10:amd64 (3.10.6-1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../47-zlib1g-dev_1%3a1.2.11.dfsg-4_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.2.11.dfsg-4) ... Selecting previously unselected package libpython3.10-dev:amd64. Preparing to unpack .../48-libpython3.10-dev_3.10.6-1_amd64.deb ... Unpacking libpython3.10-dev:amd64 (3.10.6-1) ... Selecting previously unselected package libpython3-dev:amd64. Preparing to unpack .../49-libpython3-dev_3.10.6-1_amd64.deb ... Unpacking libpython3-dev:amd64 (3.10.6-1) ... Selecting previously unselected package libpython3-all-dev:amd64. Preparing to unpack .../50-libpython3-all-dev_3.10.6-1_amd64.deb ... Unpacking libpython3-all-dev:amd64 (3.10.6-1) ... Preparing to unpack .../51-libssl3_3.0.5-2_amd64.deb ... Unpacking libssl3:amd64 (3.0.5-2) over (3.0.4-2) ... Selecting previously unselected package libxsimd-dev:amd64. Preparing to unpack .../52-libxsimd-dev_8.1.0-7_amd64.deb ... Unpacking libxsimd-dev:amd64 (8.1.0-7) ... Preparing to unpack .../53-openssl_3.0.5-2_amd64.deb ... Unpacking openssl (3.0.5-2) over (3.0.4-2) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../54-python3-lib2to3_3.10.6-1_all.deb ... Unpacking python3-lib2to3 (3.10.6-1) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../55-python3-distutils_3.10.6-1_all.deb ... Unpacking python3-distutils (3.10.6-1) ... Selecting previously unselected package python3-all. Preparing to unpack .../56-python3-all_3.10.6-1_amd64.deb ... Unpacking python3-all (3.10.6-1) ... Selecting previously unselected package python3.10-dev. Preparing to unpack .../57-python3.10-dev_3.10.6-1_amd64.deb ... Unpacking python3.10-dev (3.10.6-1) ... Selecting previously unselected package python3-dev. Preparing to unpack .../58-python3-dev_3.10.6-1_amd64.deb ... Unpacking python3-dev (3.10.6-1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../59-python3-all-dev_3.10.6-1_amd64.deb ... Unpacking python3-all-dev (3.10.6-1) ... Selecting previously unselected package python3-gast. Preparing to unpack .../60-python3-gast_0.5.2-2_all.deb ... Unpacking python3-gast (0.5.2-2) ... Selecting previously unselected package python3-beniget. Preparing to unpack .../61-python3-beniget_0.4.1-2_all.deb ... Unpacking python3-beniget (0.4.1-2) ... Preparing to unpack .../62-python3-decorator_5.1.1-2_all.deb ... Unpacking python3-decorator (5.1.1-2) over (4.4.2-2) ... Selecting previously unselected package python3-ply. Preparing to unpack .../63-python3-ply_3.11-5_all.deb ... Unpacking python3-ply (3.11-5) ... Selecting previously unselected package python3-pythran. Preparing to unpack .../64-python3-pythran_0.11.0+ds-7_amd64.deb ... Unpacking python3-pythran (0.11.0+ds-7) ... Preparing to unpack .../65-python3-scipy_1.8.1-8_amd64.deb ... Unpacking python3-scipy (1.8.1-8) over (1.7.3-2) ... Preparing to unpack .../66-python3-tk_3.10.6-1_amd64.deb ... Unpacking python3-tk:amd64 (3.10.6-1) over (3.10.5-2) ... Preparing to unpack .../67-python3-tz_2022.2.1-1_all.deb ... Unpacking python3-tz (2022.2.1-1) over (2022.1-1) ... Preparing to unpack .../68-r-base-core_4.2.1-2_amd64.deb ... Unpacking r-base-core (4.2.1-2) over (4.2.1-1) ... Setting up gcc-11-base:amd64 (11.3.0-5) ... Setting up libpython3.10:amd64 (3.10.6-1) ... Setting up libopenblas0-pthread:amd64 (0.3.20+ds-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up binutils-common:amd64 (2.38.90.20220713-2) ... Setting up libssl3:amd64 (3.0.5-2) ... Setting up linux-libc-dev:amd64 (5.18.16-1) ... Setting up libctf-nobfd0:amd64 (2.38.90.20220713-2) ... Setting up libasan6:amd64 (11.3.0-5) ... Setting up libxsimd-dev:amd64 (8.1.0-7) ... Setting up libtirpc-dev:amd64 (1.3.3+ds-1) ... Setting up rpcsvc-proto (1.4.2-4) ... Setting up libmpfr6:amd64 (4.1.0-3) ... Setting up r-base-core (4.2.1-2) ... Installing new version of config file /etc/R/Makeconf ... Setting up libmpc3:amd64 (1.2.1-2) ... Setting up libatomic1:amd64 (12.1.0-8) ... Setting up libubsan1:amd64 (12.1.0-8) ... Setting up libopenblas0:amd64 (0.3.20+ds-2) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libcrypt-dev:amd64 (1:4.4.28-2) ... Setting up libasan8:amd64 (12.1.0-8) ... Setting up libtsan2:amd64 (12.1.0-8) ... Setting up libbinutils:amd64 (2.38.90.20220713-2) ... Setting up libisl23:amd64 (0.25-1) ... Setting up libc-dev-bin (2.34-3) ... Setting up openssl (3.0.5-2) ... Setting up libcc1-0:amd64 (12.1.0-8) ... Setting up liblsan0:amd64 (12.1.0-8) ... Setting up libitm1:amd64 (12.1.0-8) ... Setting up libpython3-stdlib:amd64 (3.10.6-1) ... Setting up libjs-underscore (1.13.3~dfsg+~1.11.4-1) ... Setting up libtsan0:amd64 (11.3.0-5) ... Setting up libctf0:amd64 (2.38.90.20220713-2) ... Setting up libopenblas-pthread-dev:amd64 (0.3.20+ds-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode Setting up cpp-12 (12.1.0-8) ... Setting up python3 (3.10.6-1) ... Setting up python3-tz (2022.2.1-1) ... Setting up libopenblas-dev:amd64 (0.3.20+ds-2) ... Setting up python3-decorator (5.1.1-2) ... Setting up libgprofng0:amd64 (2.38.90.20220713-2) ... Setting up libgcc-12-dev:amd64 (12.1.0-8) ... Setting up libjs-sphinxdoc (4.5.0-4) ... Setting up libgcc-11-dev:amd64 (11.3.0-5) ... Setting up cpp (4:12.1.0-3) ... Setting up libc6-dev:amd64 (2.34-3) ... Setting up python3-lib2to3 (3.10.6-1) ... Setting up binutils-x86-64-linux-gnu (2.38.90.20220713-2) ... Setting up python3-distutils (3.10.6-1) ... Setting up libstdc++-12-dev:amd64 (12.1.0-8) ... Setting up python3-ply (3.11-5) ... Setting up python3-gast (0.5.2-2) ... Setting up python3-all (3.10.6-1) ... Setting up python3-tk:amd64 (3.10.6-1) ... Setting up binutils (2.38.90.20220713-2) ... Setting up python3-beniget (0.4.1-2) ... Setting up libexpat1-dev:amd64 (2.4.8-1) ... Setting up gcc-12 (12.1.0-8) ... Setting up libstdc++-11-dev:amd64 (11.3.0-5) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-4) ... Setting up g++-12 (12.1.0-8) ... Setting up libboost1.74-dev:amd64 (1.74.0-16.1+b1) ... Setting up gcc (4:12.1.0-3) ... Setting up libpython3.10-dev:amd64 (3.10.6-1) ... Setting up python3.10-dev (3.10.6-1) ... Setting up g++ (4:12.1.0-3) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up libboost-dev:amd64 (1.74.0.3) ... Setting up libpython3-dev:amd64 (3.10.6-1) ... Setting up libpython3-all-dev:amd64 (3.10.6-1) ... Setting up python3-dev (3.10.6-1) ... Setting up python3-all-dev (3.10.6-1) ... Setting up python3-pythran (0.11.0+ds-7) ... Setting up python3-scipy (1.8.1-8) ... Processing triggers for libc-bin (2.34-3) ... 1m24.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-yf', 'dist-upgrade'] 1m24.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m25.0s DUMP: 30200080444738c7531a3b798235a090 - 1m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'show', '--no-all-versions', 'lefse'] 1m25.2s DUMP: Package: lefse Version: 1.1.2-1 Installed-Size: 271 Maintainer: Debian Med Packaging Team Architecture: all Depends: python3-biom-format, python3-matplotlib, python3-numpy, python3-rpy2, python3:any, r-cran-coin Description-en: determine features of organisms, clades, taxonomic units, genes LEfSe (Linear discriminant analysis Effect Size) determines the features (organisms, clades, operational taxonomic units, genes, or functions) most likely to explain differences between classes by coupling standard tests for statistical significance with additional tests encoding biological consistency and effect relevance. Description-md5: 99a95edfdd51afd5bb9d222117f5342b Homepage: https://github.com/SegataLab/lefse Section: science Priority: optional Filename: pool/main/l/lefse/lefse_1.1.2-1_all.deb Size: 57484 MD5sum: 78eb728981966990f0457d0347b34788 SHA256: 2aa8a5dab75ece97b3e962812cf8eae8b0770bcdeab27e70bd0f6a72f03f4b8a 1m25.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'show', '--no-all-versions', 'lefse'] 1m25.2s INFO: apt-cache knows about the following packages: lefse 1m25.2s INFO: Running scripts pre_install 1m25.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_database-server'] 1m25.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_database-server'] 1m25.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_exceptions'] 1m25.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_exceptions'] 1m25.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_extras'] 1m25.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_extras'] 1m25.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture'] 1m25.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture'] 1m25.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m25.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m25.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy'] 1m25.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m25.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy'] 1m25.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy', 'lefse'] 1m25.3s DUMP: lefse: Installed: 1.1.2-1 Candidate: 1.1.2-1 Version table: *** 1.1.2-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 1m25.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy', 'lefse'] 1m25.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-y', 'install', 'lefse'] 1m25.7s DUMP: Reading package lists... Building dependency tree... Reading state information... lefse is already the newest version (1.1.2-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m25.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-y', 'install', 'lefse'] 1m25.7s INFO: Running scripts post_install 1m25.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_install_exceptions'] 1m25.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_install_exceptions'] 1m25.7s INFO: Running scripts post_distupgrade 1m25.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m25.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m25.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_exceptions'] 1m25.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_exceptions'] 1m25.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m25.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m25.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m25.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m25.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_zz_backports'] 1m25.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_distupgrade_zz_backports'] 1m25.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m27.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m27.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m28.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m28.9s INFO: Running scripts pre_install 1m28.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_database-server'] 1m28.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_database-server'] 1m28.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_exceptions'] 1m28.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_exceptions'] 1m28.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_extras'] 1m28.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_extras'] 1m28.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture'] 1m29.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture'] 1m29.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m29.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m29.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy'] 1m29.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m29.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy'] 1m29.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy', 'lefse'] 1m29.0s DUMP: lefse: Installed: 1.1.2-1 Candidate: 1.1.2-1 Version table: *** 1.1.2-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 1m29.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-cache', 'policy', 'lefse'] 1m29.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-y', 'install', 'lefse=1.1.2-1'] 1m29.4s DUMP: Reading package lists... Building dependency tree... Reading state information... lefse is already the newest version (1.1.2-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m29.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', '-y', 'install', 'lefse=1.1.2-1'] 1m29.4s INFO: Running scripts post_install 1m29.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_install_exceptions'] 1m29.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_install_exceptions'] 1m29.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m31.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m33.7s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', '-ac', '--ignore-obsolete'] 1m38.7s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', '-ac', '--ignore-obsolete'] 1m38.7s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m38.7s DUMP: 0.15.2 1m38.7s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m38.7s INFO: Running adequate version 0.15.2 now. 1m38.7s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'lefse'] 1m38.8s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'lefse'] 1m38.8s INFO: Running scripts pre_remove 1m38.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m38.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m38.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m38.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m38.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m42.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m42.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_exceptions'] 1m42.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/pre_remove_exceptions'] 1m42.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m42.7s DUMP: install ok installed adduser adduser 3.123 install ok installed apt apt 2.5.2 install ok installed base-files base-files 12.2 install ok installed base-passwd base-passwd 3.5.52 install ok installed bash bash 5.1-6.1 install ok installed binutils binutils 2.38.90.20220713-2 install ok installed binutils-common:amd64 binutils-common 2.38.90.20220713-2 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.38.90.20220713-2 install ok installed blt blt 2.5.3+dfsg-4.1 install ok installed bsdutils bsdutils 1:2.38.1-1 install ok installed ca-certificates ca-certificates 20211016 install ok installed coreutils coreutils 8.32-4.1 install ok installed cpp cpp 4:12.1.0-3 install ok installed cpp-12 cpp-12 12.1.0-8 install ok installed cython3 cython3 0.29.30-1+b1 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-8 install ok installed debconf debconf 1.5.79 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.3 install ok installed diffutils diffutils 1:3.8-1 install ok installed dpkg dpkg 1.21.9 install ok installed e2fsprogs e2fsprogs 1.46.5-2 install ok installed findutils findutils 4.9.0-3 install ok installed fontconfig fontconfig 2.13.1-4.4 install ok installed fontconfig-config fontconfig-config 2.13.1-4.4 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-2 install ok installed fonts-lyx fonts-lyx 2.3.6.1-1 install ok installed g++ g++ 4:12.1.0-3 install ok installed g++-12 g++-12 12.1.0-8 install ok installed gcc gcc 4:12.1.0-3 install ok installed gcc-11-base:amd64 gcc-11-base 11.3.0-5 install ok installed gcc-12 gcc-12 12.1.0-8 install ok installed gcc-12-base:amd64 gcc-12-base 12.1.0-8 install ok installed gpgv gpgv 2.2.35-3 install ok installed grep grep 3.7-1 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.64 install ok installed lefse lefse 1.1.2-1 install ok installed libacl1:amd64 libacl1 2.3.1-1 install ok installed libaec0:amd64 libaec0 1.0.6-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.2 install ok installed libasan6:amd64 libasan6 11.3.0-5 install ok installed libasan8:amd64 libasan8 12.1.0-8 install ok installed libatomic1:amd64 libatomic1 12.1.0-8 install ok installed libattr1:amd64 libattr1 1:2.5.1-1 install ok installed libaudit-common libaudit-common 1:3.0.7-1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1+b1 install ok installed libbinutils:amd64 libbinutils 2.38.90.20220713-2 install ok installed libblas3:amd64 libblas3 3.10.1-2 install ok installed libblkid1:amd64 libblkid1 2.38.1-1 install ok installed libboost-dev:amd64 libboost-dev 1.74.0.3 install ok installed libboost1.74-dev:amd64 libboost1.74-dev 1.74.0-16.1+b1 install ok installed libbrotli1:amd64 libbrotli1 1.0.9-2+b4 install ok installed libbsd0:amd64 libbsd0 0.11.6-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5 install ok installed libc-bin libc-bin 2.34-3 install ok installed libc-dev-bin libc-dev-bin 2.34-3 install ok installed libc6:amd64 libc6 2.34-3 install ok installed libc6-dev:amd64 libc6-dev 2.34-3 install ok installed libcairo2:amd64 libcairo2 1.16.0-6 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b1 install ok installed libcap2:amd64 libcap2 1:2.44-1 install ok installed libcc1-0:amd64 libcc1-0 12.1.0-8 install ok installed libcom-err2:amd64 libcom-err2 1.46.5-2 install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.28-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.28-2 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.38.90.20220713-2 install ok installed libctf0:amd64 libctf0 2.38.90.20220713-2 install ok installed libcurl4:amd64 libcurl4 7.84.0-2 install ok installed libdatrie1:amd64 libdatrie1 0.2.13-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.263 install ok installed libdeflate0:amd64 libdeflate0 1.12-1 install ok installed libexpat1:amd64 libexpat1 2.4.8-1 install ok installed libexpat1-dev:amd64 libexpat1-dev 2.4.8-1 install ok installed libext2fs2:amd64 libext2fs2 1.46.5-2 install ok installed libffi8:amd64 libffi8 3.4.2-4 install ok installed libfontconfig1:amd64 libfontconfig1 2.13.1-4.4 install ok installed libfreetype6:amd64 libfreetype6 2.12.1+dfsg-3 install ok installed libfribidi0:amd64 libfribidi0 1.0.8-2.1 install ok installed libgcc-11-dev:amd64 libgcc-11-dev 11.3.0-5 install ok installed libgcc-12-dev:amd64 libgcc-12-dev 12.1.0-8 install ok installed libgcc-s1:amd64 libgcc-s1 12.1.0-8 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-2 install ok installed libgfortran5:amd64 libgfortran5 12.1.0-8 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.72.3-1+b1 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1 install ok installed libgnutls30:amd64 libgnutls30 3.7.7-2 install ok installed libgomp1:amd64 libgomp1 12.1.0-8 install ok installed libgpg-error0:amd64 libgpg-error0 1.45-2 install ok installed libgprofng0:amd64 libgprofng0 2.38.90.20220713-2 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.20-1 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 2.7.4-1+b1 install ok installed libhdf5-103-1:amd64 libhdf5-103-1 1.10.7+repack-4+b1 install ok installed libhdf5-hl-100:amd64 libhdf5-hl-100 1.10.7+repack-4+b1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libice6:amd64 libice6 2:1.0.10-1 install ok installed libicu71:amd64 libicu71 71.1-3 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1 install ok installed libimagequant0:amd64 libimagequant0 2.17.0-1 install ok installed libisl23:amd64 libisl23 0.25-1 install ok installed libitm1:amd64 libitm1 12.1.0-8 install ok installed libjbig0:amd64 libjbig0 2.1-3.1+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.2-1 install ok installed libjs-jquery libjs-jquery 3.6.0+dfsg+~3.5.13-1 install ok installed libjs-jquery-ui libjs-jquery-ui 1.13.2+dfsg-1 install ok installed libjs-sphinxdoc libjs-sphinxdoc 4.5.0-4 install ok installed libjs-underscore libjs-underscore 1.13.3~dfsg+~1.11.4-1 install ok installed libk5crypto3:amd64 libk5crypto3 1.20-1 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-1 install ok installed libkrb5-3:amd64 libkrb5-3 1.20-1 install ok installed libkrb5support0:amd64 libkrb5support0 1.20-1 install ok installed liblapack3:amd64 liblapack3 3.10.1-2 install ok installed liblbfgsb0:amd64 liblbfgsb0 3.0+dfsg.3-11 install ok installed liblcms2-2:amd64 liblcms2-2 2.13.1-1 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.12+dfsg-2+b1 install ok installed liblerc4:amd64 liblerc4 4.0.0+ds-1 install ok installed liblsan0:amd64 liblsan0 12.1.0-8 install ok installed liblz4-1:amd64 liblz4-1 1.9.3-2 install ok installed liblzf1:amd64 liblzf1 3.6-3 install ok installed liblzma5:amd64 liblzma5 5.2.5-2.1 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-1 install ok installed libmpc3:amd64 libmpc3 1.2.1-2 install ok installed libmpdec3:amd64 libmpdec3 2.5.1-2 install ok installed libmpfr6:amd64 libmpfr6 4.1.0-3 install ok installed libncursesw6:amd64 libncursesw6 6.3+20220423-2 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.48.0-1 install ok installed libnsl-dev:amd64 libnsl-dev 1.3.0-2 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libopenblas-dev:amd64 libopenblas-dev 0.3.20+ds-2 install ok installed libopenblas-pthread-dev:amd64 libopenblas-pthread-dev 0.3.20+ds-2 install ok installed libopenblas0:amd64 libopenblas0 0.3.20+ds-2 install ok installed libopenblas0-pthread:amd64 libopenblas0-pthread 0.3.20+ds-2 install ok installed libopenjp2-7:amd64 libopenjp2-7 2.5.0-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.4.0-13 install ok installed libpam-modules-bin libpam-modules-bin 1.4.0-13 install ok installed libpam-runtime libpam-runtime 1.4.0-13 install ok installed libpam0g:amd64 libpam0g 1.4.0-13 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.50.9+ds-1 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.50.9+ds-1 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.50.9+ds-1 install ok installed libpaper-utils libpaper-utils 1.1.28+b1 install ok installed libpaper1:amd64 libpaper1 1.1.28+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-1 install ok installed libpcre3:amd64 libpcre3 2:8.39-14 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.40.0-1 install ok installed libpng16-16:amd64 libpng16-16 1.6.37-5 install ok installed libpsl5:amd64 libpsl5 0.21.0-1.2 install ok installed libpython3-all-dev:amd64 libpython3-all-dev 3.10.6-1 install ok installed libpython3-dev:amd64 libpython3-dev 3.10.6-1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.10.6-1 install ok installed libpython3.10:amd64 libpython3.10 3.10.6-1 install ok installed libpython3.10-dev:amd64 libpython3.10-dev 3.10.6-1 install ok installed libpython3.10-minimal:amd64 libpython3.10-minimal 3.10.6-1 install ok installed libpython3.10-stdlib:amd64 libpython3.10-stdlib 3.10.6-1 install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-5 install ok installed libquadmath0:amd64 libquadmath0 12.1.0-8 install ok installed libraqm0:amd64 libraqm0 0.7.0-4 install ok installed libreadline8:amd64 libreadline8 8.1.2-1.2 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg-6 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg-6 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b1 install ok installed libselinux1:amd64 libselinux1 3.4-1+b1 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b1 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsm6:amd64 libsm6 2:1.2.3-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.39.2-1 install ok installed libss2:amd64 libss2 1.46.5-2 install ok installed libssh2-1:amd64 libssh2-1 1.10.0-3+b1 install ok installed libssl3:amd64 libssl3 3.0.5-2 install ok installed libstdc++-11-dev:amd64 libstdc++-11-dev 11.3.0-5 install ok installed libstdc++-12-dev:amd64 libstdc++-12-dev 12.1.0-8 install ok installed libstdc++6:amd64 libstdc++6 12.1.0-8 install ok installed libsystemd0:amd64 libsystemd0 251.4-1 install ok installed libsz2:amd64 libsz2 1.0.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.18.0-4 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.12+dfsg-1 install ok installed libthai-data libthai-data 0.1.29-1 install ok installed libthai0:amd64 libthai0 0.1.29-1 install ok installed libtiff5:amd64 libtiff5 4.4.0-4 install ok installed libtinfo6:amd64 libtinfo6 6.3+20220423-2 install ok installed libtirpc-common libtirpc-common 1.3.3+ds-1 install ok installed libtirpc-dev:amd64 libtirpc-dev 1.3.3+ds-1 install ok installed libtirpc3:amd64 libtirpc3 1.3.3+ds-1 install ok installed libtk8.6:amd64 libtk8.6 8.6.12-1 install ok installed libtsan0:amd64 libtsan0 11.3.0-5 install ok installed libtsan2:amd64 libtsan2 12.1.0-8 install ok installed libubsan1:amd64 libubsan1 12.1.0-8 install ok installed libudev1:amd64 libudev1 251.4-1 install ok installed libunistring2:amd64 libunistring2 1.0-1 install ok installed libuuid1:amd64 libuuid1 2.38.1-1 install ok installed libwebp7:amd64 libwebp7 1.2.2-2+b1 install ok installed libwebpdemux2:amd64 libwebpdemux2 1.2.2-2+b1 install ok installed libwebpmux3:amd64 libwebpmux3 1.2.2-2+b1 install ok installed libx11-6:amd64 libx11-6 2:1.8.1-2 install ok installed libx11-data libx11-data 2:1.8.1-2 install ok installed libxau6:amd64 libxau6 1:1.0.9-1 install ok installed libxcb-render0:amd64 libxcb-render0 1.15-1 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.15-1 install ok installed libxcb1:amd64 libxcb1 1.15-1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.4-1 install ok installed libxft2:amd64 libxft2 2.3.4-1 install ok installed libxml2:amd64 libxml2 2.9.14+dfsg-1+b1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1.1 install ok installed libxsimd-dev:amd64 libxsimd-dev 8.1.0-7 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.35-1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1 install ok installed libxt6:amd64 libxt6 1:1.2.1-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg-1 install ok installed linux-libc-dev:amd64 linux-libc-dev 5.18.16-1 install ok installed login login 1:4.11.1+dfsg1-2 install ok installed logsave logsave 1.46.5-2 install ok installed lsb-base lsb-base 11.2 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed media-types media-types 8.0.0 install ok installed mount mount 2.38.1-1 install ok installed ncurses-base ncurses-base 6.3+20220423-2 install ok installed ncurses-bin ncurses-bin 6.3+20220423-2 install ok installed openssl openssl 3.0.5-2 install ok installed passwd passwd 1:4.11.1+dfsg1-2 install ok installed perl-base perl-base 5.34.0-5 install ok installed python-babel-localedata python-babel-localedata 2.8.0+dfsg.1-7 install ok installed python-matplotlib-data python-matplotlib-data 3.5.2-2 install ok installed python3 python3 3.10.6-1 install ok installed python3-all python3-all 3.10.6-1 install ok installed python3-all-dev python3-all-dev 3.10.6-1 install ok installed python3-appdirs python3-appdirs 1.4.4-2 install ok installed python3-attr python3-attr 22.1.0-1 install ok installed python3-babel python3-babel 2.8.0+dfsg.1-7 install ok installed python3-beniget python3-beniget 0.4.1-2 install ok installed python3-biom-format python3-biom-format 2.1.12-1+b1 install ok installed python3-brotli python3-brotli 1.0.9-2+b4 install ok installed python3-cffi-backend:amd64 python3-cffi-backend 1.15.1-1 install ok installed python3-click python3-click 8.0.3-1 install ok installed python3-colorama python3-colorama 0.4.5-1 install ok installed python3-cycler python3-cycler 0.11.0-1 install ok installed python3-dateutil python3-dateutil 2.8.1-6 install ok installed python3-decorator python3-decorator 5.1.1-2 install ok installed python3-dev python3-dev 3.10.6-1 install ok installed python3-distutils python3-distutils 3.10.6-1 install ok installed python3-fonttools python3-fonttools 4.34.4-1+b1 install ok installed python3-fs python3-fs 2.4.16-1 install ok installed python3-gast python3-gast 0.5.2-2 install ok installed python3-h5py python3-h5py 3.7.0-2 install ok installed python3-h5py-serial python3-h5py-serial 3.7.0-2 install ok installed python3-jinja2 python3-jinja2 3.0.3-1 install ok installed python3-kiwisolver python3-kiwisolver 1.3.2-1+b2 install ok installed python3-lib2to3 python3-lib2to3 3.10.6-1 install ok installed python3-lxml:amd64 python3-lxml 4.9.1-1+b1 install ok installed python3-lz4 python3-lz4 4.0.0+dfsg-1+b1 install ok installed python3-markupsafe python3-markupsafe 2.0.1-2+b2 install ok installed python3-matplotlib python3-matplotlib 3.5.2-2 install ok installed python3-minimal python3-minimal 3.10.6-1 install ok installed python3-mpmath python3-mpmath 1.2.1-2 install ok installed python3-munkres python3-munkres 1.1.4-3 install ok installed python3-numpy python3-numpy 1:1.21.5-1+b1 install ok installed python3-packaging python3-packaging 21.3-1 install ok installed python3-pandas python3-pandas 1.3.5+dfsg-5 install ok installed python3-pandas-lib:amd64 python3-pandas-lib 1.3.5+dfsg-5+b1 install ok installed python3-pil:amd64 python3-pil 9.2.0-1+b1 install ok installed python3-pil.imagetk:amd64 python3-pil.imagetk 9.2.0-1+b1 install ok installed python3-pkg-resources python3-pkg-resources 59.6.0-1.2 install ok installed python3-ply python3-ply 3.11-5 install ok installed python3-pyparsing python3-pyparsing 3.0.7-2 install ok installed python3-pythran python3-pythran 0.11.0+ds-7 install ok installed python3-pytz-deprecation-shim python3-pytz-deprecation-shim 0.1.0.post0-2 install ok installed python3-rpy2 python3-rpy2 3.5.3-1 install ok installed python3-scipy python3-scipy 1.8.1-8 install ok installed python3-six python3-six 1.16.0-4 install ok installed python3-sympy python3-sympy 1.10.1-3 install ok installed python3-tk:amd64 python3-tk 3.10.6-1 install ok installed python3-tz python3-tz 2022.2.1-1 install ok installed python3-tzlocal python3-tzlocal 4.2-1 install ok installed python3-ufolib2 python3-ufolib2 0.13.1+dfsg1-1 install ok installed python3-unicodedata2 python3-unicodedata2 14.0.0+ds-8+b1 install ok installed python3.10 python3.10 3.10.6-1 install ok installed python3.10-dev python3.10-dev 3.10.6-1 install ok installed python3.10-minimal python3.10-minimal 3.10.6-1 install ok installed r-base-core r-base-core 4.2.1-2 install ok installed r-cran-codetools r-cran-codetools 0.2-18-1 install ok installed r-cran-coin r-cran-coin 1.4-2-1 install ok installed r-cran-lattice r-cran-lattice 0.20-45-3 install ok installed r-cran-libcoin r-cran-libcoin 1.0-9-1 install ok installed r-cran-mass r-cran-mass 7.3-58.1-1 install ok installed r-cran-matrix r-cran-matrix 1.4-1-1 install ok installed r-cran-matrixstats r-cran-matrixstats 0.62.0-1 install ok installed r-cran-modeltools r-cran-modeltools 0.2-23-2 install ok installed r-cran-multcomp r-cran-multcomp 1.4-20-1 install ok installed r-cran-mvtnorm r-cran-mvtnorm 1.1-3-1 install ok installed r-cran-sandwich r-cran-sandwich 3.0-2-1 install ok installed r-cran-survival r-cran-survival 3.4-0-1 install ok installed r-cran-th.data r-cran-th.data 1.1-1-1 install ok installed r-cran-zoo r-cran-zoo 1.8-10-1 install ok installed readline-common readline-common 8.1.2-1.2 install ok installed rpcsvc-proto rpcsvc-proto 1.4.2-4 install ok installed sed sed 4.8-1 install ok installed sensible-utils sensible-utils 0.0.17 install ok installed sgml-base sgml-base 1.30 install ok installed sysvinit-utils sysvinit-utils 3.04-1 install ok installed tar tar 1.34+dfsg-1 install ok installed tk8.6-blt2.5 tk8.6-blt2.5 2.5.3+dfsg-4.1 install ok installed tzdata tzdata 2022b-1 install ok installed ucf ucf 3.0043 install ok installed unicode-data unicode-data 14.0.0-1.1 install ok installed unzip unzip 6.0-27 install ok installed util-linux util-linux 2.38.1-1 install ok installed util-linux-extra util-linux-extra 2.38.1-1 install ok installed x11-common x11-common 1:7.7+23 install ok installed xdg-utils xdg-utils 1.1.3-4.1 install ok installed zip zip 3.0-12 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-4 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.2.11.dfsg-4 1m42.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m42.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'blt', 'ca-certificates', 'cpp', 'cpp-12', 'cython3', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-lyx', 'g++-', 'g++-12', 'gcc', 'gcc-11-base:amd64', 'gcc-12', 'libaec0:amd64', 'libasan6:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.74-dev:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-11-dev:amd64', 'libgcc-12-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libice6:amd64', 'libicu71:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'liblsan0:amd64', 'liblzf1:amd64', 'libmd0:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libopenjp2-7:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.10:amd64', 'libpython3.10-dev:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libstdc++-11-dev:amd64', 'libstdc++-12-dev:amd64', 'libsz2:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxsimd-dev:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'media-types', 'openssl', 'python-babel-localedata', 'python-matplotlib-data', 'python3', 'python3-all', 'python3-all-dev', 'python3-appdirs', 'python3-attr', 'python3-babel', 'python3-beniget', 'python3-biom-format', 'python3-brotli', 'python3-cffi-backend:amd64', 'python3-click', 'python3-colorama', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-dev', 'python3-distutils', 'python3-fonttools', 'python3-fs', 'python3-gast', 'python3-h5py', 'python3-h5py-serial', 'python3-jinja2', 'python3-kiwisolver', 'python3-lib2to3', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-munkres', 'python3-numpy', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-ply', 'python3-pyparsing', 'python3-pythran', 'python3-pytz-deprecation-shim', 'python3-rpy2', 'python3-scipy', 'python3-six', 'python3-sympy', 'python3-tk:amd64', 'python3-tz', 'python3-tzlocal', 'python3-ufolib2', 'python3-unicodedata2', 'python3.10', 'python3.10-dev', 'python3.10-minimal', 'r-base-core', 'r-cran-codetools', 'r-cran-coin', 'r-cran-lattice', 'r-cran-libcoin', 'r-cran-mass', 'r-cran-matrix', 'r-cran-matrixstats', 'r-cran-modeltools', 'r-cran-multcomp', 'r-cran-mvtnorm', 'r-cran-sandwich', 'r-cran-survival', 'r-cran-th.data', 'r-cran-zoo', 'readline-common', 'rpcsvc-proto', 'sensible-utils', 'tk8.6-blt2.5', 'ucf', 'unicode-data', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'zlib1g-dev:amd64', 'lefse'] 1m48.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: binutils binutils-common binutils-x86-64-linux-gnu blt ca-certificates cpp cpp-12 cython3 fontconfig fontconfig-config fonts-dejavu-core fonts-lyx g++ g++-12 gcc gcc-11-base gcc-12 lefse libaec0 libasan6 libasan8 libatomic1 libbinutils libblas3 libboost-dev libboost1.74-dev libbrotli1 libbsd0 libc-dev-bin libc6-dev libcairo2 libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libcurl4 libdatrie1 libdeflate0 libexpat1 libexpat1-dev libfontconfig1 libfreetype6 libfribidi0 libgcc-11-dev libgcc-12-dev libgfortran5 libglib2.0-0 libgomp1 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhdf5-103-1 libhdf5-hl-100 libice6 libicu71 libimagequant0 libisl23 libitm1 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libldap-2.5-0 liblerc4 liblsan0 liblzf1 libmd0 libmpc3 libmpdec3 libmpfr6 libncursesw6 libnghttp2-14 libnsl-dev libnsl2 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libqhull-r8.0 libquadmath0 libraqm0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libsqlite3-0 libssh2-1 libssl3 libstdc++-11-dev libstdc++-12-dev libsz2 libtcl8.6 libthai-data libthai0 libtiff5 libtirpc-common libtirpc-dev libtirpc3 libtk8.6 libtsan0 libtsan2 libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxsimd-dev libxslt1.1 libxss1 libxt6 linux-libc-dev media-types openssl python-babel-localedata python-matplotlib-data python3 python3-all python3-all-dev python3-appdirs python3-attr python3-babel python3-beniget python3-biom-format python3-brotli python3-cffi-backend python3-click python3-colorama python3-cycler python3-dateutil python3-decorator python3-dev python3-distutils python3-fonttools python3-fs python3-gast python3-h5py python3-h5py-serial python3-jinja2 python3-kiwisolver python3-lib2to3 python3-lxml python3-lz4 python3-markupsafe python3-matplotlib python3-minimal python3-mpmath python3-munkres python3-numpy python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pkg-resources python3-ply python3-pyparsing python3-pythran python3-pytz-deprecation-shim python3-rpy2 python3-scipy python3-six python3-sympy python3-tk python3-tz python3-tzlocal python3-ufolib2 python3-unicodedata2 python3.10 python3.10-dev python3.10-minimal r-base-core r-cran-codetools r-cran-coin r-cran-lattice r-cran-libcoin r-cran-mass r-cran-matrix r-cran-matrixstats r-cran-modeltools r-cran-multcomp r-cran-mvtnorm r-cran-sandwich r-cran-survival r-cran-th.data r-cran-zoo readline-common rpcsvc-proto sensible-utils tk8.6-blt2.5 ucf unicode-data unzip x11-common xdg-utils zip zlib1g-dev 0 upgraded, 0 newly installed, 233 to remove and 0 not upgraded. After this operation, 1576 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 43451 files and directories currently installed.) Removing lefse (1.1.2-1) ... Removing python3-biom-format (2.1.12-1+b1) ... Removing python3-scipy (1.8.1-8) ... Removing python3-pythran (0.11.0+ds-7) ... Removing g++ (4:12.1.0-3) ... Removing gcc (4:12.1.0-3) ... Removing python3-matplotlib (3.5.2-2) ... Removing r-cran-coin (1.4-2-1) ... Removing r-cran-multcomp (1.4-20-1) ... Removing r-cran-sandwich (3.0-2-1) ... Removing r-cran-zoo (1.8-10-1) ... Removing r-cran-th.data (1.1-1-1) ... Removing r-cran-survival (3.4-0-1) ... Removing python3-rpy2 (3.5.3-1) ... Removing r-cran-matrix (1.4-1-1) ... Removing cpp (4:12.1.0-3) ... Removing cython3 (0.29.30-1+b1) ... Removing python-matplotlib-data (3.5.2-2) ... Removing fonts-lyx (2.3.6.1-1) ... dpkg: warning: while removing fonts-lyx, directory '/usr/share/fonts/truetype/lyx' not empty so not removed Removing g++-12 (12.1.0-8) ... Removing libboost-dev:amd64 (1.74.0.3) ... Removing libboost1.74-dev:amd64 (1.74.0-16.1+b1) ... Removing libstdc++-11-dev:amd64 (11.3.0-5) ... Removing libgcc-11-dev:amd64 (11.3.0-5) ... Removing libtsan0:amd64 (11.3.0-5) ... Removing libasan6:amd64 (11.3.0-5) ... Removing gcc-11-base:amd64 (11.3.0-5) ... Removing python3-h5py (3.7.0-2) ... Removing python3-h5py-serial (3.7.0-2) ... Removing libhdf5-hl-100:amd64 (1.10.7+repack-4+b1) ... Removing libhdf5-103-1:amd64 (1.10.7+repack-4+b1) ... Removing libsz2:amd64 (1.0.6-1) ... Removing libaec0:amd64 (1.0.6-1) ... Removing libstdc++-12-dev:amd64 (12.1.0-8) ... Removing python3-pandas (1.3.5+dfsg-5) ... Removing python3-pandas-lib:amd64 (1.3.5+dfsg-5+b1) ... Removing python3-numpy (1:1.21.5-1+b1) ... Removing liblbfgsb0:amd64 (3.0+dfsg.3-11) ... Removing r-cran-libcoin (1.0-9-1) ... Removing liblapack3:amd64 (3.10.1-2) ... Removing libblas3:amd64 (3.10.1-2) ... Removing python3-all-dev (3.10.6-1) ... Removing libpython3-all-dev:amd64 (3.10.6-1) ... Removing python3-dev (3.10.6-1) ... Removing libpython3-dev:amd64 (3.10.6-1) ... Removing python3.10-dev (3.10.6-1) ... Removing libpython3.10-dev:amd64 (3.10.6-1) ... Removing zlib1g-dev:amd64 (1:1.2.11.dfsg-4) ... Removing libexpat1-dev:amd64 (2.4.8-1) ... Removing libc6-dev:amd64 (2.34-3) ... Removing libc-dev-bin (2.34-3) ... Removing libcrypt-dev:amd64 (1:4.4.28-2) ... Removing python3-all (3.10.6-1) ... Removing python3-distutils (3.10.6-1) ... Removing python3-tzlocal (4.2-1) ... Removing python3-pytz-deprecation-shim (0.1.0.post0-2) ... Removing libpython3.10:amd64 (3.10.6-1) ... Removing libopenblas-dev:amd64 (0.3.20+ds-2) ... Removing libopenblas-pthread-dev:amd64 (0.3.20+ds-2) ... Removing libopenblas0:amd64 (0.3.20+ds-2) ... Removing libnsl-dev:amd64 (1.3.0-2) ... Removing libtirpc-dev:amd64 (1.3.3+ds-1) ... Removing libjs-sphinxdoc (4.5.0-4) ... Removing libjs-jquery-ui (1.13.2+dfsg-1) ... Removing libjs-jquery (3.6.0+dfsg+~3.5.13-1) ... Removing libjs-underscore (1.13.3~dfsg+~1.11.4-1) ... Removing liblzf1:amd64 (3.6-3) ... Removing libqhull-r8.0:amd64 (2020.2-5) ... Removing libxsimd-dev:amd64 (8.1.0-7) ... Removing linux-libc-dev:amd64 (5.18.16-1) ... Removing python3-jinja2 (3.0.3-1) ... Removing python3-babel (2.8.0+dfsg.1-7) ... Removing python-babel-localedata (2.8.0+dfsg.1-7) ... Removing python3-beniget (0.4.1-2) ... Removing python3-cffi-backend:amd64 (1.15.1-1) ... Removing python3-click (8.0.3-1) ... Removing python3-colorama (0.4.5-1) ... Removing python3-cycler (0.11.0-1) ... Removing python3-dateutil (2.8.1-6) ... Removing python3-decorator (5.1.1-2) ... Removing python3-gast (0.5.2-2) ... Removing python3-kiwisolver (1.3.2-1+b2) ... Removing python3-lib2to3 (3.10.6-1) ... Removing python3-markupsafe (2.0.1-2+b2) ... Removing python3-packaging (21.3-1) ... Removing python3-ply (3.11-5) ... Removing python3-pyparsing (3.0.7-2) ... Removing r-cran-codetools (0.2-18-1) ... Removing r-cran-lattice (0.20-45-3) ... Removing r-cran-mass (7.3-58.1-1) ... Removing r-cran-matrixstats (0.62.0-1) ... Removing r-cran-modeltools (0.2-23-2) ... Removing r-cran-mvtnorm (1.1-3-1) ... Removing rpcsvc-proto (1.4.2-4) ... Removing gcc-12 (12.1.0-8) ... Removing binutils (2.38.90.20220713-2) ... Removing binutils-x86-64-linux-gnu (2.38.90.20220713-2) ... Removing libgprofng0:amd64 (2.38.90.20220713-2) ... Removing libctf0:amd64 (2.38.90.20220713-2) ... Removing libbinutils:amd64 (2.38.90.20220713-2) ... Removing binutils-common:amd64 (2.38.90.20220713-2) ... Removing r-base-core (4.2.1-2) ... Removing ca-certificates (20211016) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing cpp-12 (12.1.0-8) ... Removing libpangocairo-1.0-0:amd64 (1.50.9+ds-1) ... Removing libpangoft2-1.0-0:amd64 (1.50.9+ds-1) ... Removing libpango-1.0-0:amd64 (1.50.9+ds-1) ... Removing fontconfig (2.13.1-4.4) ... Removing libcairo2:amd64 (1.16.0-6) ... Removing libgcc-12-dev:amd64 (12.1.0-8) ... Removing libasan8:amd64 (12.1.0-8) ... Removing libatomic1:amd64 (12.1.0-8) ... Removing libcurl4:amd64 (7.84.0-2) ... Removing libxt6:amd64 (1:1.2.1-1) ... Removing libxcb-shm0:amd64 (1.15-1) ... Removing libsm6:amd64 (2:1.2.3-1) ... Removing libice6:amd64 (2:1.0.10-1) ... Removing libcc1-0:amd64 (12.1.0-8) ... Removing libctf-nobfd0:amd64 (2.38.90.20220713-2) ... Removing libthai0:amd64 (0.1.29-1) ... Removing libdatrie1:amd64 (0.2.13-2) ... Removing libopenblas0-pthread:amd64 (0.3.20+ds-2) ... Removing libgfortran5:amd64 (12.1.0-8) ... Removing libisl23:amd64 (0.25-1) ... Removing libitm1:amd64 (12.1.0-8) ... Removing libldap-2.5-0:amd64 (2.5.12+dfsg-2+b1) ... Removing liblsan0:amd64 (12.1.0-8) ... Removing libmpc3:amd64 (1.2.1-2) ... Removing libmpfr6:amd64 (4.1.0-3) ... Removing libnghttp2-14:amd64 (1.48.0-1) ... Removing libpaper-utils (1.1.28+b1) ... Removing libpaper1:amd64 (1.1.28+b1) ... Removing libpixman-1-0:amd64 (0.40.0-1) ... Removing libpsl5:amd64 (0.21.0-1.2) ... Removing libquadmath0:amd64 (12.1.0-8) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.28+dfsg-6) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg-6) ... Removing libssh2-1:amd64 (1.10.0-3+b1) ... Removing openssl (3.0.5-2) ... Removing libthai-data (0.1.29-1) ... Removing libtsan2:amd64 (12.1.0-8) ... Removing libubsan1:amd64 (12.1.0-8) ... Removing libxcb-render0:amd64 (1.15-1) ... Removing unzip (6.0-27) ... Removing xdg-utils (1.1.3-4.1) ... Removing zip (3.0-12) ... Removing python3-pil:amd64 (9.2.0-1+b1) ... Removing libraqm0:amd64 (0.7.0-4) ... Removing libharfbuzz0b:amd64 (2.7.4-1+b1) ... Removing libtiff5:amd64 (4.4.0-4) ... Removing libdeflate0:amd64 (1.12-1) ... Removing libfribidi0:amd64 (1.0.8-2.1) ... Removing libglib2.0-0:amd64 (2.72.3-1+b1) ... Removing libimagequant0:amd64 (2.17.0-1) ... Removing libgomp1:amd64 (12.1.0-8) ... Removing libgraphite2-3:amd64 (1.3.14-1) ... Removing libjbig0:amd64 (2.1-3.1+b2) ... Removing libjpeg62-turbo:amd64 (1:2.1.2-1) ... Removing liblcms2-2:amd64 (2.13.1-1) ... Removing liblerc4:amd64 (4.0.0+ds-1) ... Removing libopenjp2-7:amd64 (2.5.0-1) ... Removing libwebpmux3:amd64 (1.2.2-2+b1) ... Removing libwebpdemux2:amd64 (1.2.2-2+b1) ... Removing libwebp7:amd64 (1.2.2-2+b1) ... Removing python3-ufolib2 (0.13.1+dfsg1-1) ... Removing python3-fonttools (4.34.4-1+b1) ... Removing python3-pil.imagetk:amd64 (9.2.0-1+b1) ... Removing python3-tk:amd64 (3.10.6-1) ... Removing blt (2.5.3+dfsg-4.1) ... Removing tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Removing libtk8.6:amd64 (8.6.12-1) ... Removing libxft2:amd64 (2.3.4-1) ... Removing libfontconfig1:amd64 (2.13.1-4.4) ... Removing fontconfig-config (2.13.1-4.4) ... Removing fonts-dejavu-core (2.37-2) ... Removing libfreetype6:amd64 (2.12.1+dfsg-3) ... Removing libbrotli1:amd64 (1.0.9-2+b4) ... Removing libxss1:amd64 (1:1.2.3-1) ... Removing python3-sympy (1.10.1-3) ... Removing python3-lxml:amd64 (4.9.1-1+b1) ... Removing libxslt1.1:amd64 (1.1.35-1) ... Removing libxml2:amd64 (2.9.14+dfsg-1+b1) ... Removing libicu71:amd64 (71.1-3) ... Removing libpng16-16:amd64 (1.6.37-5) ... Removing libtcl8.6:amd64 (8.6.12+dfsg-1) ... Removing libxext6:amd64 (2:1.3.4-1) ... Removing libxrender1:amd64 (1:0.9.10-1.1) ... Removing python3-fs (2.4.16-1) ... Removing python3-appdirs (1.4.4-2) ... Removing python3-attr (22.1.0-1) ... Removing python3-brotli (1.0.9-2+b4) ... Removing python3-lz4 (4.0.0+dfsg-1+b1) ... Removing python3-mpmath (1.2.1-2) ... Removing python3-munkres (1.1.4-3) ... Removing python3-pkg-resources (59.6.0-1.2) ... Removing python3-six (1.16.0-4) ... Removing python3-tz (2022.2.1-1) ... Removing python3-unicodedata2 (14.0.0+ds-8+b1) ... Removing ucf (3.0043) ... Removing sensible-utils (0.0.17) ... Removing unicode-data (14.0.0-1.1) ... Removing x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libx11-6:amd64 (2:1.8.1-2) ... Removing libxcb1:amd64 (1.15-1) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.11.6-1) ... Removing python3 (3.10.6-1) ... Removing python3-minimal (3.10.6-1) ... Removing python3.10 (3.10.6-1) ... Removing python3.10-minimal (3.10.6-1) ... Removing libexpat1:amd64 (2.4.8-1) ... Removing libpython3-stdlib:amd64 (3.10.6-1) ... Removing libpython3.10-stdlib:amd64 (3.10.6-1) ... find: '/usr/lib/python3': No such file or directory Removing libmd0:amd64 (1.0.4-2) ... Removing libmpdec3:amd64 (2.5.1-2) ... Removing libncursesw6:amd64 (6.3+20220423-2) ... Removing libnsl2:amd64 (1.3.0-2) ... Removing libpython3.10-minimal:amd64 (3.10.6-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8:amd64 (8.1.2-1.2) ... Removing libsqlite3-0:amd64 (3.39.2-1) ... Removing libx11-data (2:1.8.1-2) ... Removing libxau6:amd64 (1:1.0.9-1) ... Removing media-types (8.0.0) ... Removing readline-common (8.1.2-1.2) ... Removing libtirpc3:amd64 (1.3.3+ds-1) ... Removing libgssapi-krb5-2:amd64 (1.20-1) ... Removing libkrb5-3:amd64 (1.20-1) ... Removing libk5crypto3:amd64 (1.20-1) ... Removing libkeyutils1:amd64 (1.6.3-1) ... Removing libkrb5support0:amd64 (1.20-1) ... Removing libssl3:amd64 (3.0.5-2) ... Removing libtirpc-common (1.3.3+ds-1) ... Processing triggers for sgml-base (1.30) ... Processing triggers for libc-bin (2.34-3) ... 1m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'blt', 'ca-certificates', 'cpp', 'cpp-12', 'cython3', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-lyx', 'g++-', 'g++-12', 'gcc', 'gcc-11-base:amd64', 'gcc-12', 'libaec0:amd64', 'libasan6:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.74-dev:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-11-dev:amd64', 'libgcc-12-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libice6:amd64', 'libicu71:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'liblsan0:amd64', 'liblzf1:amd64', 'libmd0:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libopenjp2-7:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.10:amd64', 'libpython3.10-dev:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libstdc++-11-dev:amd64', 'libstdc++-12-dev:amd64', 'libsz2:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxsimd-dev:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'media-types', 'openssl', 'python-babel-localedata', 'python-matplotlib-data', 'python3', 'python3-all', 'python3-all-dev', 'python3-appdirs', 'python3-attr', 'python3-babel', 'python3-beniget', 'python3-biom-format', 'python3-brotli', 'python3-cffi-backend:amd64', 'python3-click', 'python3-colorama', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-dev', 'python3-distutils', 'python3-fonttools', 'python3-fs', 'python3-gast', 'python3-h5py', 'python3-h5py-serial', 'python3-jinja2', 'python3-kiwisolver', 'python3-lib2to3', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-munkres', 'python3-numpy', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-ply', 'python3-pyparsing', 'python3-pythran', 'python3-pytz-deprecation-shim', 'python3-rpy2', 'python3-scipy', 'python3-six', 'python3-sympy', 'python3-tk:amd64', 'python3-tz', 'python3-tzlocal', 'python3-ufolib2', 'python3-unicodedata2', 'python3.10', 'python3.10-dev', 'python3.10-minimal', 'r-base-core', 'r-cran-codetools', 'r-cran-coin', 'r-cran-lattice', 'r-cran-libcoin', 'r-cran-mass', 'r-cran-matrix', 'r-cran-matrixstats', 'r-cran-modeltools', 'r-cran-multcomp', 'r-cran-mvtnorm', 'r-cran-sandwich', 'r-cran-survival', 'r-cran-th.data', 'r-cran-zoo', 'readline-common', 'rpcsvc-proto', 'sensible-utils', 'tk8.6-blt2.5', 'ucf', 'unicode-data', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'zlib1g-dev:amd64', 'lefse'] 1m48.5s INFO: Running scripts post_remove 1m48.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_remove_exceptions'] 1m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_remove_exceptions'] 1m48.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'blt', 'ca-certificates', 'cpp', 'cpp-12', 'cython3', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-lyx', 'g++', 'g++-12', 'gcc', 'gcc-11-base:amd64', 'gcc-12', 'libaec0:amd64', 'libasan6:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.74-dev:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-11-dev:amd64', 'libgcc-12-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libice6:amd64', 'libicu71:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'liblsan0:amd64', 'liblzf1:amd64', 'libmd0:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libopenjp2-7:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.10:amd64', 'libpython3.10-dev:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libstdc++-11-dev:amd64', 'libstdc++-12-dev:amd64', 'libsz2:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxsimd-dev:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'media-types', 'openssl', 'python-babel-localedata', 'python-matplotlib-data', 'python3', 'python3-all', 'python3-all-dev', 'python3-appdirs', 'python3-attr', 'python3-babel', 'python3-beniget', 'python3-biom-format', 'python3-brotli', 'python3-cffi-backend:amd64', 'python3-click', 'python3-colorama', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-dev', 'python3-distutils', 'python3-fonttools', 'python3-fs', 'python3-gast', 'python3-h5py', 'python3-h5py-serial', 'python3-jinja2', 'python3-kiwisolver', 'python3-lib2to3', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-munkres', 'python3-numpy', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-ply', 'python3-pyparsing', 'python3-pythran', 'python3-pytz-deprecation-shim', 'python3-rpy2', 'python3-scipy', 'python3-six', 'python3-sympy', 'python3-tk:amd64', 'python3-tz', 'python3-tzlocal', 'python3-ufolib2', 'python3-unicodedata2', 'python3.10', 'python3.10-dev', 'python3.10-minimal', 'r-base-core', 'r-cran-codetools', 'r-cran-coin', 'r-cran-lattice', 'r-cran-libcoin', 'r-cran-mass', 'r-cran-matrix', 'r-cran-matrixstats', 'r-cran-modeltools', 'r-cran-multcomp', 'r-cran-mvtnorm', 'r-cran-sandwich', 'r-cran-survival', 'r-cran-th.data', 'r-cran-zoo', 'readline-common', 'rpcsvc-proto', 'sensible-utils', 'tk8.6-blt2.5', 'ucf', 'unicode-data', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'zlib1g-dev:amd64'] 1m49.2s DUMP: dpkg: warning: ignoring request to remove binutils which isn't installed dpkg: warning: ignoring request to remove binutils-common which isn't installed dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove blt which isn't installed (Reading database ... 6664 files and directories currently installed.) Purging configuration files for ca-certificates (20211016) ... Removing dangling symlinks from /etc/ssl/certs... done. dpkg: warning: ignoring request to remove cpp which isn't installed dpkg: warning: ignoring request to remove cpp-12 which isn't installed dpkg: warning: ignoring request to remove cython3 which isn't installed Purging configuration files for fontconfig (2.13.1-4.4) ... Purging configuration files for fontconfig-config (2.13.1-4.4) ... Purging configuration files for fonts-dejavu-core (2.37-2) ... dpkg: warning: while removing fonts-dejavu-core, directory '/usr/share/fonts/truetype/dejavu' not empty so not removed dpkg: warning: ignoring request to remove fonts-lyx which isn't installed dpkg: warning: ignoring request to remove g++ which isn't installed dpkg: warning: ignoring request to remove g++-12 which isn't installed dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-11-base which isn't installed dpkg: warning: ignoring request to remove gcc-12 which isn't installed dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libasan6 which isn't installed dpkg: warning: ignoring request to remove libasan8 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libbinutils which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libboost-dev which isn't installed dpkg: warning: ignoring request to remove libboost1.74-dev which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed Purging configuration files for libcrypt-dev:amd64 (1:4.4.28-2) ... dpkg: warning: ignoring request to remove libctf-nobfd0 which isn't installed dpkg: warning: ignoring request to remove libctf0 which isn't installed dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libexpat1-dev which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libgcc-11-dev which isn't installed dpkg: warning: ignoring request to remove libgcc-12-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.72.3-1+b1) ... dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgprofng0 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.20-1) ... dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libhdf5-103-1 which isn't installed dpkg: warning: ignoring request to remove libhdf5-hl-100 which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu71 which isn't installed dpkg: warning: ignoring request to remove libimagequant0 which isn't installed dpkg: warning: ignoring request to remove libisl23 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed Purging configuration files for libjs-jquery (3.6.0+dfsg+~3.5.13-1) ... dpkg: warning: ignoring request to remove libjs-jquery-ui which isn't installed dpkg: warning: ignoring request to remove libjs-sphinxdoc which isn't installed dpkg: warning: ignoring request to remove libjs-underscore which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblbfgsb0 which isn't installed dpkg: warning: ignoring request to remove liblcms2-2 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove liblerc4 which isn't installed dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove liblzf1 which isn't installed dpkg: warning: ignoring request to remove libmd0 which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpdec3 which isn't installed dpkg: warning: ignoring request to remove libmpfr6 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnsl-dev which isn't installed dpkg: warning: ignoring request to remove libnsl2 which isn't installed dpkg: warning: ignoring request to remove libopenblas-dev which isn't installed dpkg: warning: ignoring request to remove libopenblas-pthread-dev which isn't installed dpkg: warning: ignoring request to remove libopenblas0 which isn't installed dpkg: warning: ignoring request to remove libopenblas0-pthread which isn't installed dpkg: warning: ignoring request to remove libopenjp2-7 which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpaper-utils which isn't installed Purging configuration files for libpaper1:amd64 (1.1.28+b1) ... dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libpython3-all-dev which isn't installed dpkg: warning: ignoring request to remove libpython3-dev which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3.10 which isn't installed dpkg: warning: ignoring request to remove libpython3.10-dev which isn't installed Purging configuration files for libpython3.10-minimal:amd64 (3.10.6-1) ... dpkg: warning: ignoring request to remove libpython3.10-stdlib which isn't installed dpkg: warning: ignoring request to remove libqhull-r8.0 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libraqm0 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libssl3 which isn't installed dpkg: warning: ignoring request to remove libstdc++-11-dev which isn't installed dpkg: warning: ignoring request to remove libstdc++-12-dev which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtiff5 which isn't installed Purging configuration files for libtirpc-common (1.3.3+ds-1) ... dpkg: warning: ignoring request to remove libtirpc-dev which isn't installed dpkg: warning: ignoring request to remove libtirpc3 which isn't installed dpkg: warning: ignoring request to remove libtk8.6 which isn't installed dpkg: warning: ignoring request to remove libtsan0 which isn't installed dpkg: warning: ignoring request to remove libtsan2 which isn't installed dpkg: warning: ignoring request to remove libubsan1 which isn't installed dpkg: warning: ignoring request to remove libwebp7 which isn't installed dpkg: warning: ignoring request to remove libwebpdemux2 which isn't installed dpkg: warning: ignoring request to remove libwebpmux3 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxsimd-dev which isn't installed dpkg: warning: ignoring request to remove libxslt1.1 which isn't installed dpkg: warning: ignoring request to remove libxss1 which isn't installed dpkg: warning: ignoring request to remove libxt6 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed Purging configuration files for media-types (8.0.0) ... Purging configuration files for openssl (3.0.5-2) ... dpkg: warning: ignoring request to remove python-babel-localedata which isn't installed Purging configuration files for python-matplotlib-data (3.5.2-2) ... Purging configuration files for python3 (3.10.6-1) ... dpkg: warning: ignoring request to remove python3-all which isn't installed dpkg: warning: ignoring request to remove python3-all-dev which isn't installed dpkg: warning: ignoring request to remove python3-appdirs which isn't installed dpkg: warning: ignoring request to remove python3-attr which isn't installed dpkg: warning: ignoring request to remove python3-babel which isn't installed dpkg: warning: ignoring request to remove python3-beniget which isn't installed dpkg: warning: ignoring request to remove python3-biom-format which isn't installed dpkg: warning: ignoring request to remove python3-brotli which isn't installed dpkg: warning: ignoring request to remove python3-cffi-backend which isn't installed dpkg: warning: ignoring request to remove python3-click which isn't installed dpkg: warning: ignoring request to remove python3-colorama which isn't installed dpkg: warning: ignoring request to remove python3-cycler which isn't installed dpkg: warning: ignoring request to remove python3-dateutil which isn't installed dpkg: warning: ignoring request to remove python3-decorator which isn't installed dpkg: warning: ignoring request to remove python3-dev which isn't installed dpkg: warning: ignoring request to remove python3-distutils which isn't installed dpkg: warning: ignoring request to remove python3-fonttools which isn't installed dpkg: warning: ignoring request to remove python3-fs which isn't installed dpkg: warning: ignoring request to remove python3-gast which isn't installed dpkg: warning: ignoring request to remove python3-h5py which isn't installed dpkg: warning: ignoring request to remove python3-h5py-serial which isn't installed dpkg: warning: ignoring request to remove python3-jinja2 which isn't installed dpkg: warning: ignoring request to remove python3-kiwisolver which isn't installed dpkg: warning: ignoring request to remove python3-lib2to3 which isn't installed dpkg: warning: ignoring request to remove python3-lxml which isn't installed dpkg: warning: ignoring request to remove python3-lz4 which isn't installed dpkg: warning: ignoring request to remove python3-markupsafe which isn't installed dpkg: warning: ignoring request to remove python3-matplotlib which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-mpmath which isn't installed dpkg: warning: ignoring request to remove python3-munkres which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-packaging which isn't installed dpkg: warning: ignoring request to remove python3-pandas which isn't installed dpkg: warning: ignoring request to remove python3-pandas-lib which isn't installed dpkg: warning: ignoring request to remove python3-pil which isn't installed dpkg: warning: ignoring request to remove python3-pil.imagetk which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-ply which isn't installed dpkg: warning: ignoring request to remove python3-pyparsing which isn't installed dpkg: warning: ignoring request to remove python3-pythran which isn't installed dpkg: warning: ignoring request to remove python3-pytz-deprecation-shim which isn't installed dpkg: warning: ignoring request to remove python3-rpy2 which isn't installed dpkg: warning: ignoring request to remove python3-scipy which isn't installed dpkg: warning: ignoring request to remove python3-six which isn't installed Purging configuration files for python3-sympy (1.10.1-3) ... dpkg: warning: ignoring request to remove python3-tk which isn't installed dpkg: warning: ignoring request to remove python3-tz which isn't installed dpkg: warning: ignoring request to remove python3-tzlocal which isn't installed dpkg: warning: ignoring request to remove python3-ufolib2 which isn't installed dpkg: warning: ignoring request to remove python3-unicodedata2 which isn't installed dpkg: warning: ignoring request to remove python3.10 which isn't installed dpkg: warning: ignoring request to remove python3.10-dev which isn't installed Purging configuration files for python3.10-minimal (3.10.6-1) ... Purging configuration files for r-base-core (4.2.1-2) ... dpkg: warning: ignoring request to remove r-cran-codetools which isn't installed dpkg: warning: ignoring request to remove r-cran-coin which isn't installed dpkg: warning: ignoring request to remove r-cran-lattice which isn't installed dpkg: warning: ignoring request to remove r-cran-libcoin which isn't installed dpkg: warning: ignoring request to remove r-cran-mass which isn't installed dpkg: warning: ignoring request to remove r-cran-matrix which isn't installed dpkg: warning: ignoring request to remove r-cran-matrixstats which isn't installed dpkg: warning: ignoring request to remove r-cran-modeltools which isn't installed dpkg: warning: ignoring request to remove r-cran-multcomp which isn't installed dpkg: warning: ignoring request to remove r-cran-mvtnorm which isn't installed dpkg: warning: ignoring request to remove r-cran-sandwich which isn't installed dpkg: warning: ignoring request to remove r-cran-survival which isn't installed dpkg: warning: ignoring request to remove r-cran-th.data which isn't installed dpkg: warning: ignoring request to remove r-cran-zoo which isn't installed Purging configuration files for readline-common (8.1.2-1.2) ... dpkg: warning: ignoring request to remove rpcsvc-proto which isn't installed dpkg: warning: ignoring request to remove sensible-utils which isn't installed dpkg: warning: ignoring request to remove tk8.6-blt2.5 which isn't installed Purging configuration files for ucf (3.0043) ... dpkg: warning: ignoring request to remove unicode-data which isn't installed Purging configuration files for unzip (6.0-27) ... Purging configuration files for x11-common (1:7.7+23) ... dpkg: warning: ignoring request to remove xdg-utils which isn't installed dpkg: warning: ignoring request to remove zip which isn't installed dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed 1m49.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'blt', 'ca-certificates', 'cpp', 'cpp-12', 'cython3', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-lyx', 'g++', 'g++-12', 'gcc', 'gcc-11-base:amd64', 'gcc-12', 'libaec0:amd64', 'libasan6:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.74-dev:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-11-dev:amd64', 'libgcc-12-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1:amd64', 'libhdf5-hl-100:amd64', 'libice6:amd64', 'libicu71:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'liblsan0:amd64', 'liblzf1:amd64', 'libmd0:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libopenjp2-7:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.10:amd64', 'libpython3.10-dev:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libstdc++-11-dev:amd64', 'libstdc++-12-dev:amd64', 'libsz2:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxsimd-dev:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'media-types', 'openssl', 'python-babel-localedata', 'python-matplotlib-data', 'python3', 'python3-all', 'python3-all-dev', 'python3-appdirs', 'python3-attr', 'python3-babel', 'python3-beniget', 'python3-biom-format', 'python3-brotli', 'python3-cffi-backend:amd64', 'python3-click', 'python3-colorama', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-dev', 'python3-distutils', 'python3-fonttools', 'python3-fs', 'python3-gast', 'python3-h5py', 'python3-h5py-serial', 'python3-jinja2', 'python3-kiwisolver', 'python3-lib2to3', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-mpmath', 'python3-munkres', 'python3-numpy', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-ply', 'python3-pyparsing', 'python3-pythran', 'python3-pytz-deprecation-shim', 'python3-rpy2', 'python3-scipy', 'python3-six', 'python3-sympy', 'python3-tk:amd64', 'python3-tz', 'python3-tzlocal', 'python3-ufolib2', 'python3-unicodedata2', 'python3.10', 'python3.10-dev', 'python3.10-minimal', 'r-base-core', 'r-cran-codetools', 'r-cran-coin', 'r-cran-lattice', 'r-cran-libcoin', 'r-cran-mass', 'r-cran-matrix', 'r-cran-matrixstats', 'r-cran-modeltools', 'r-cran-multcomp', 'r-cran-mvtnorm', 'r-cran-sandwich', 'r-cran-survival', 'r-cran-th.data', 'r-cran-zoo', 'readline-common', 'rpcsvc-proto', 'sensible-utils', 'tk8.6-blt2.5', 'ucf', 'unicode-data', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'zlib1g-dev:amd64'] 1m49.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg', '--purge', 'lefse'] 1m49.2s DUMP: dpkg: warning: ignoring request to remove lefse which isn't installed 1m49.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg', '--purge', 'lefse'] 1m49.2s INFO: Running scripts post_purge 1m49.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_purge_exceptions'] 1m49.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_purge_exceptions'] 1m49.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg', '--purge', '--pending'] 1m49.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg', '--purge', '--pending'] 1m49.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg', '--remove', '--pending'] 1m49.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg', '--remove', '--pending'] 1m49.2s INFO: Running scripts post_test 1m49.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_test_exceptions'] 1m49.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'tmp/scripts/post_test_exceptions'] 1m49.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m49.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m49.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg-divert', '--list'] 1m49.6s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m49.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'dpkg-divert', '--list'] 1m49.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', 'clean'] 1m49.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpwbqtecda', 'apt-get', 'clean'] 1m49.6s DEBUG: Recording chroot state 1m50.0s INFO: Warning: Package purging left files on system: /usr/local/share/fonts/ not owned /usr/local/share/fonts/.uuid not owned /usr/share/fonts/ owned by: fonts-lyx, fonts-dejavu-core /usr/share/fonts/.uuid not owned /usr/share/fonts/truetype/ owned by: fonts-lyx, fonts-dejavu-core /usr/share/fonts/truetype/.uuid not owned /usr/share/fonts/truetype/dejavu/ owned by: fonts-dejavu-core /usr/share/fonts/truetype/dejavu/.uuid not owned /usr/share/fonts/truetype/lyx/ owned by: fonts-lyx /usr/share/fonts/truetype/lyx/.uuid not owned /var/lib/sgml-base/supercatalog.old not owned 1m50.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/shm'] 1m50.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/shm'] 1m50.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/console'] 1m50.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/console'] 1m50.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/ptmx'] 1m50.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/ptmx'] 1m50.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/pts'] 1m50.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/dev/pts'] 1m50.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/proc'] 1m50.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpwbqtecda/proc'] 1m50.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m50.5s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpwbqtecda'] 1m50.5s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpwbqtecda 1m50.5s INFO: PASS: Upgrading between Debian distributions. 1m50.5s INFO: PASS: All tests. 1m50.5s INFO: piuparts run ends. ret=0 End: 2022-08-16 07:11:46 GMT