Start: 2024-10-11 15:36:02 GMT [testing] Package: libbio-db-seqfeature-perl Version: 1.7.4-2 Installed-Size: 575 Maintainer: Debian Med Packaging Team Architecture: all Replaces: libbio-perl-perl (<< 1.7.3) Depends: perl:any, libbio-perl-perl, libbio-db-gff-perl, libdbd-pg-perl, libdbd-sqlite3-perl, libdbi-perl Breaks: libbio-perl-perl (<< 1.7.3) Description: Normalized feature for use with Bio::DB::SeqFeature::Store Homepage: https://metacpan.org/release/Bio-DB-SeqFeature Description-md5: 3f2313a6f4fd1e332c6c234f6d0f9f7c Section: perl Priority: optional Filename: pool/main/libb/libbio-db-seqfeature-perl/libbio-db-seqfeature-perl_1.7.4-2_all.deb Size: 168912 MD5sum: ad3b7910397b2745207675d19c41d1e4 SHA256: 9f3f0d868535cc8d0ac934c4471821a434a6dd31371dc2b493dca75d2d90b1a2 [sid] Package: libbio-db-seqfeature-perl Version: 1.7.5-1 Installed-Size: 632 Maintainer: Debian Med Packaging Team Architecture: all Replaces: libbio-perl-perl (<< 1.7.3) Depends: perl:any, libbio-perl-perl, libbio-db-gff-perl, libdbd-pg-perl, libdbd-sqlite3-perl, libdbi-perl Breaks: libbio-perl-perl (<< 1.7.3) Description: Normalized feature for use with Bio::DB::SeqFeature::Store Homepage: https://metacpan.org/release/Bio-DB-SeqFeature Description-md5: 3f2313a6f4fd1e332c6c234f6d0f9f7c Section: perl Priority: optional Filename: pool/main/libb/libbio-db-seqfeature-perl/libbio-db-seqfeature-perl_1.7.5-1_all.deb Size: 166256 MD5sum: c91178db9077ad376fbaf8695c05c3ac SHA256: db478b568df22554ba74ce46a4bea86e7ac53a5a415ceeae2de4cb13d680f8fa Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libbio-db-seqfeature-perl=1.7.5-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libbio-db-seqfeature-perl=1.7.5-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmphinvbt7p 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmphinvbt7p 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/pts'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/pts'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/ptmx'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/console'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/console'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/shm'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/shm'] 0m0.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.4s DEBUG: Created policy-rc.d and chmodded it. 0m0.4s DEBUG: Created resolv.conf. 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmphinvbt7p/tmp/scripts/ 0m0.4s INFO: Running scripts post_chroot_unpack 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', 'update'] 0m3.1s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [169 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9327 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6219 kB] Fetched 15.7 MB in 2s (8210 kB/s) Reading package lists... 0m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', 'update'] 0m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-yf', 'dist-upgrade'] 0m4.5s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: bsdutils libblkid1 libmount1 libsmartcols1 libuuid1 login mount util-linux 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2098 kB of archives. After this operation, 8192 B of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.2-9 [105 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.2-9 [35.6 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.2-9 [168 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.2-9 [199 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.2-9 [139 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.2-9 [1216 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.2-9 [154 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.2-9 [81.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2098 kB in 0s (29.7 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.2-9_amd64.deb ... Unpacking bsdutils (1:2.40.2-9) over (1:2.40.2-8) ... Setting up bsdutils (1:2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libuuid1_2.40.2-9_amd64.deb ... Unpacking libuuid1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libuuid1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libblkid1_2.40.2-9_amd64.deb ... Unpacking libblkid1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libblkid1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.2-9_amd64.deb ... Unpacking libmount1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libmount1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.2-9_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libsmartcols1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.2-9_amd64.deb ... Unpacking util-linux (2.40.2-9) over (2.40.2-8) ... Setting up util-linux (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../mount_2.40.2-9_amd64.deb ... Unpacking mount (2.40.2-9) over (2.40.2-8) ... Preparing to unpack .../login_1%3a4.16.0-2+really2.40.2-9_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.2-9) over (1:4.16.0-2+really2.40.2-8) ... Setting up mount (2.40.2-9) ... Setting up login (1:4.16.0-2+really2.40.2-9) ... Processing triggers for libc-bin (2.40-3) ... 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-yf', 'dist-upgrade'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.0s DUMP: bbd2d9cf1a74ec23bc8d58b2b19d972d - 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.0s INFO: Running scripts post_setup 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_dummy_users'] 0m5.7s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_dummy_users'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_forbid_home'] 0m5.7s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_forbid_home'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.8s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_minimize'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_minimize'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_zz_backports'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_setup_zz_backports'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.8s DUMP: install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-3 install ok installed gpgv gpgv 2.2.43-8+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 256.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.6-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.8s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m5.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m6.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m6.3s INFO: Running scripts is_testable 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/is_testable_uninstallable'] 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/is_testable_uninstallable'] 0m6.3s INFO: Running scripts pre_test 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_test_exceptions'] 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_test_exceptions'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_test_root_password'] 0m6.4s DUMP: New password: Retype new password: passwd: password updated successfully 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_test_root_password'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'show', '--no-all-versions', 'libbio-db-seqfeature-perl'] 0m6.7s DUMP: Package: libbio-db-seqfeature-perl Version: 1.7.4-2 Installed-Size: 575 Maintainer: Debian Med Packaging Team Architecture: all Replaces: libbio-perl-perl (<< 1.7.3) Depends: perl:any, libbio-perl-perl, libbio-db-gff-perl, libdbd-pg-perl, libdbd-sqlite3-perl, libdbi-perl Breaks: libbio-perl-perl (<< 1.7.3) Description-en: Normalized feature for use with Bio::DB::SeqFeature::Store The Bio::DB::SeqFeature object is the default SeqFeature class stored in Bio::DB::SeqFeature databases. It implements both the Bio::DB::SeqFeature::NormalizedFeatureI and Bio::DB::SeqFeature::NormalizedTableFeatureI interfaces, which means that its subfeatures, if any, are stored in the database in a normalized fashion, and that the parent/child hierarchy of features and subfeatures are also stored in the database as set of tuples. This provides efficiencies in both storage and retrieval speed. . Typically you will not create Bio::DB::SeqFeature directly, but will ask the database to do so on your behalf, as described in Bio::DB::SeqFeature::Store. Description-md5: 3f2313a6f4fd1e332c6c234f6d0f9f7c Homepage: https://metacpan.org/release/Bio-DB-SeqFeature Section: perl Priority: optional Filename: pool/main/libb/libbio-db-seqfeature-perl/libbio-db-seqfeature-perl_1.7.4-2_all.deb Size: 168912 MD5sum: ad3b7910397b2745207675d19c41d1e4 SHA256: 9f3f0d868535cc8d0ac934c4471821a434a6dd31371dc2b493dca75d2d90b1a2 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'show', '--no-all-versions', 'libbio-db-seqfeature-perl'] 0m6.7s INFO: apt-cache knows about the following packages: libbio-db-seqfeature-perl 0m6.7s INFO: Running scripts pre_install 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_database-server'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_database-server'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_exceptions'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_exceptions'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_extras'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_extras'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy'] 0m6.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy', 'libbio-db-seqfeature-perl'] 0m6.8s DUMP: libbio-db-seqfeature-perl: Installed: (none) Candidate: 1.7.4-2 Version table: 1.7.4-2 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy', 'libbio-db-seqfeature-perl'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-y', 'install', 'libbio-db-seqfeature-perl'] 0m14.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: apache2-bin ca-certificates libapache-dbi-perl libapache2-mod-perl2 libapr1t64 libaprutil1-dbd-sqlite3 libaprutil1-ldap libaprutil1t64 libbio-db-biofetch-perl libbio-db-gff-perl libbio-perl-perl libbrotli1 libcgi-pm-perl libclone-perl libcurl4t64 libdata-stag-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdevel-symdump-perl libencode-locale-perl libexpat1 libfile-listing-perl libgdbm-compat4t64 libgdbm6t64 libgssapi-krb5-2 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjansson4 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libnet-http-perl libnet-ssleay-perl libnghttp2-14 libperl5.38t64 libpq5 libpsl5t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libtimedate-perl libtry-tiny-perl liburi-perl libwww-perl libwww-robotrules-perl libxml2 netbase openssl perl perl-modules-5.38 perl-openssl-defaults Suggested packages: apache2-doc apache2-suexec-pristine | apache2-suexec-custom www-browser bioperl libxml-sax-expatxs-perl libmldbm-perl libnet-daemon-perl libsql-statement-perl gdbm-l10n krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl sensible-utils libsub-name-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make libtap-harness-archive-perl debhelper Recommended packages: libapache2-reload-perl libbsd-resource-perl bioperl-run | libbio-perl-run-perl libace-perl libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl libconvert-binary-c-perl libdbd-mysql-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-tableextract-perl liblist-moreutils-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl libxml-dom-xpath-perl libxml-parser-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libxml-libxml-perl libcgi-fast-perl perl-tk libgd-gd2-perl | libgd-gd2-noxpm-perl libxml-libxslt-perl libmldbm-perl libxml-perl libhtml-format-perl libio-compress-brotli-perl krb5-locales libldap-common publicsuffix libsasl2-modules libdata-dump-perl libhtml-form-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: apache2-bin ca-certificates libapache-dbi-perl libapache2-mod-perl2 libapr1t64 libaprutil1-dbd-sqlite3 libaprutil1-ldap libaprutil1t64 libbio-db-biofetch-perl libbio-db-gff-perl libbio-db-seqfeature-perl libbio-perl-perl libbrotli1 libcgi-pm-perl libclone-perl libcurl4t64 libdata-stag-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdevel-symdump-perl libencode-locale-perl libexpat1 libfile-listing-perl libgdbm-compat4t64 libgdbm6t64 libgssapi-krb5-2 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjansson4 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libnet-http-perl libnet-ssleay-perl libnghttp2-14 libperl5.38t64 libpq5 libpsl5t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libtimedate-perl libtry-tiny-perl liburi-perl libwww-perl libwww-robotrules-perl libxml2 netbase openssl perl perl-modules-5.38 perl-openssl-defaults 0 upgraded, 69 newly installed, 0 to remove and 0 not upgraded. Need to get 31.5 MB of archives. After this operation, 131 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 perl-modules-5.38 all 5.38.2-5 [2905 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libgdbm6t64 amd64 1.24-2 [75.2 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libgdbm-compat4t64 amd64 1.24-2 [50.3 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libperl5.38t64 amd64 5.38.2-5 [4275 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 perl amd64 5.38.2-5 [236 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 openssl amd64 3.3.2-1 [1381 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 ca-certificates all 20240203 [158 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libapr1t64 amd64 1.7.5-1 [104 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.3-1 [105 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libaprutil1t64 amd64 1.6.3-3 [89.3 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.0-1 [902 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 libaprutil1-dbd-sqlite3 amd64 1.6.3-3 [13.9 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3 [187 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libaprutil1-ldap amd64 1.6.3-3 [12.1 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:22 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.63.0-1 [74.8 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.0-7 [216 kB] Get:28 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.10.1-1 [352 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libjansson4 amd64 2.14-2+b2 [39.9 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 liblua5.4-0 amd64 5.4.6-3+b1 [147 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 apache2-bin amd64 2.4.62-3 [1394 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 libdevel-symdump-perl all 2.18-5 [15.8 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 liburi-perl all 5.29-1 [103 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:38 http://deb.debian.org/debian trixie/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:39 http://deb.debian.org/debian trixie/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 libhtml-parser-perl amd64 3.83-1 [99.4 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:43 http://deb.debian.org/debian trixie/main amd64 libclone-perl amd64 0.47-1 [13.5 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 libhttp-message-perl all 6.46-1 [79.7 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:50 http://deb.debian.org/debian trixie/main amd64 libnet-ssleay-perl amd64 1.94-1+b1 [339 kB] Get:51 http://deb.debian.org/debian trixie/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:52 http://deb.debian.org/debian trixie/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:55 http://deb.debian.org/debian trixie/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:56 http://deb.debian.org/debian trixie/main amd64 libwww-perl all 6.77-1 [183 kB] Get:57 http://deb.debian.org/debian trixie/main amd64 libapache2-mod-perl2 amd64 2.0.13-2 [808 kB] Get:58 http://deb.debian.org/debian trixie/main amd64 libdbi-perl amd64 1.645-1 [860 kB] Get:59 http://deb.debian.org/debian trixie/main amd64 libapache-dbi-perl all 1.12-3 [48.5 kB] Get:60 http://deb.debian.org/debian trixie/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:61 http://deb.debian.org/debian trixie/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:62 http://deb.debian.org/debian trixie/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:63 http://deb.debian.org/debian trixie/main amd64 libbio-db-biofetch-perl all 1.7.3-4 [17.5 kB] Get:64 http://deb.debian.org/debian trixie/main amd64 libcgi-pm-perl all 4.66-1 [217 kB] Get:65 http://deb.debian.org/debian trixie/main amd64 libbio-db-gff-perl all 1.7.4-1 [273 kB] Get:66 http://deb.debian.org/debian trixie/main amd64 libpq5 amd64 17.0-1 [220 kB] Get:67 http://deb.debian.org/debian trixie/main amd64 libdbd-pg-perl amd64 3.18.0-1+b2 [211 kB] Get:68 http://deb.debian.org/debian trixie/main amd64 libdbd-sqlite3-perl amd64 1.74-1+b2 [175 kB] Get:69 http://deb.debian.org/debian trixie/main amd64 libbio-db-seqfeature-perl all 1.7.4-2 [169 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 31.5 MB in 0s (113 MB/s) Selecting previously unselected package perl-modules-5.38. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5145 files and directories currently installed.) Preparing to unpack .../00-perl-modules-5.38_5.38.2-5_all.deb ... Unpacking perl-modules-5.38 (5.38.2-5) ... Selecting previously unselected package libgdbm6t64:amd64. Preparing to unpack .../01-libgdbm6t64_1.24-2_amd64.deb ... Unpacking libgdbm6t64:amd64 (1.24-2) ... Selecting previously unselected package libgdbm-compat4t64:amd64. Preparing to unpack .../02-libgdbm-compat4t64_1.24-2_amd64.deb ... Unpacking libgdbm-compat4t64:amd64 (1.24-2) ... Selecting previously unselected package libperl5.38t64:amd64. Preparing to unpack .../03-libperl5.38t64_5.38.2-5_amd64.deb ... Unpacking libperl5.38t64:amd64 (5.38.2-5) ... Selecting previously unselected package perl. Preparing to unpack .../04-perl_5.38.2-5_amd64.deb ... Unpacking perl (5.38.2-5) ... Selecting previously unselected package netbase. Preparing to unpack .../05-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package openssl. Preparing to unpack .../06-openssl_3.3.2-1_amd64.deb ... Unpacking openssl (3.3.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../07-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libapr1t64:amd64. Preparing to unpack .../08-libapr1t64_1.7.5-1_amd64.deb ... Unpacking libapr1t64:amd64 (1.7.5-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../09-libexpat1_2.6.3-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-1) ... Selecting previously unselected package libaprutil1t64:amd64. Preparing to unpack .../10-libaprutil1t64_1.6.3-3_amd64.deb ... Unpacking libaprutil1t64:amd64 (1.6.3-3) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../11-libsqlite3-0_3.46.0-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.0-1) ... Selecting previously unselected package libaprutil1-dbd-sqlite3:amd64. Preparing to unpack .../12-libaprutil1-dbd-sqlite3_1.6.3-3_amd64.deb ... Unpacking libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../13-libsasl2-modules-db_2.1.28+dfsg1-8_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libsasl2-2:amd64. 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Unpacking libclone-perl:amd64 (0.47-1) ... Selecting previously unselected package libio-html-perl. Preparing to unpack .../43-libio-html-perl_1.004-3_all.deb ... Unpacking libio-html-perl (1.004-3) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../44-liblwp-mediatypes-perl_6.04-2_all.deb ... Unpacking liblwp-mediatypes-perl (6.04-2) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../45-libhttp-message-perl_6.46-1_all.deb ... Unpacking libhttp-message-perl (6.46-1) ... Selecting previously unselected package libhttp-cookies-perl. Preparing to unpack .../46-libhttp-cookies-perl_6.11-1_all.deb ... Unpacking libhttp-cookies-perl (6.11-1) ... Selecting previously unselected package libhttp-negotiate-perl. Preparing to unpack .../47-libhttp-negotiate-perl_6.01-2_all.deb ... Unpacking libhttp-negotiate-perl (6.01-2) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../48-perl-openssl-defaults_7+b2_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (7+b2) ... Selecting previously unselected package libnet-ssleay-perl:amd64. Preparing to unpack .../49-libnet-ssleay-perl_1.94-1+b1_amd64.deb ... Unpacking libnet-ssleay-perl:amd64 (1.94-1+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../50-libio-socket-ssl-perl_2.089-1_all.deb ... Unpacking libio-socket-ssl-perl (2.089-1) ... Selecting previously unselected package libnet-http-perl. Preparing to unpack .../51-libnet-http-perl_6.23-1_all.deb ... Unpacking libnet-http-perl (6.23-1) ... Selecting previously unselected package liblwp-protocol-https-perl. Preparing to unpack .../52-liblwp-protocol-https-perl_6.14-1_all.deb ... Unpacking liblwp-protocol-https-perl (6.14-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../53-libtry-tiny-perl_0.32-1_all.deb ... Unpacking libtry-tiny-perl (0.32-1) ... 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Selecting previously unselected package libdbd-pg-perl. Preparing to unpack .../66-libdbd-pg-perl_3.18.0-1+b2_amd64.deb ... Unpacking libdbd-pg-perl (3.18.0-1+b2) ... Selecting previously unselected package libdbd-sqlite3-perl:amd64. Preparing to unpack .../67-libdbd-sqlite3-perl_1.74-1+b2_amd64.deb ... Unpacking libdbd-sqlite3-perl:amd64 (1.74-1+b2) ... Selecting previously unselected package libbio-db-seqfeature-perl. Preparing to unpack .../68-libbio-db-seqfeature-perl_1.7.4-2_all.deb ... Unpacking libbio-db-seqfeature-perl (1.7.4-2) ... Setting up libexpat1:amd64 (2.6.3-1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libicu72:amd64 (72.1-5) ... Setting up libgdbm6t64:amd64 (1.24-2) ... Setting up libgdbm-compat4t64:amd64 (1.24-2) ... Setting up libbrotli1:amd64 (1.1.0-2+b4) ... Setting up libsqlite3-0:amd64 (3.46.0-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.63.0-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up libjansson4:amd64 (2.14-2+b2) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up perl-modules-5.38 (5.38.2-5) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up libapr1t64:amd64 (1.7.5-1) ... Setting up liblua5.4-0:amd64 (5.4.6-3+b1) ... Setting up netbase (6.4) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libperl5.38t64:amd64 (5.38.2-5) ... Setting up libssh2-1t64:amd64 (1.11.0-7) ... Setting up openssl (3.3.2-1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up libaprutil1t64:amd64 (1.6.3-3) ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up perl (5.38.2-5) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libio-html-perl (1.004-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libdevel-symdump-perl (2.18-5) ... Setting up liburi-perl (5.29-1) ... Setting up libdbi-perl:amd64 (1.645-1) ... Setting up libnet-ssleay-perl:amd64 (1.94-1+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libcurl4t64:amd64 (8.10.1-1) ... Setting up libclone-perl:amd64 (0.47-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libpq5:amd64 (17.0-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libdbd-pg-perl (3.18.0-1+b2) ... Setting up libaprutil1-ldap:amd64 (1.6.3-3) ... Setting up apache2-bin (2.4.62-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up libhtml-parser-perl:amd64 (3.83-1) ... Setting up libdbd-sqlite3-perl:amd64 (1.74-1+b2) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhttp-message-perl (6.46-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libcgi-pm-perl (4.66-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libapache2-mod-perl2 (2.0.13-2) ... Setting up libbio-db-biofetch-perl (1.7.3-4) ... Setting up libapache-dbi-perl (1.12-3) ... Setting up libbio-db-gff-perl (1.7.4-1) ... Setting up libbio-db-seqfeature-perl (1.7.4-2) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-y', 'install', 'libbio-db-seqfeature-perl'] 0m14.8s INFO: Running scripts post_install 0m14.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_install_exceptions'] 0m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_install_exceptions'] 0m14.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m15.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m15.4s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmphinvbt7p to sid 0m15.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m15.4s INFO: Running scripts pre_distupgrade 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_exceptions'] 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_exceptions'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', 'update'] 0m19.2s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [202 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.0 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7337 kB] Fetched 17.5 MB in 3s (5775 kB/s) Reading package lists... 0m19.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', 'update'] 0m19.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-yf', 'dist-upgrade'] 0m21.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: gcc-14-base gpgv hostname libaudit-common libaudit1 libbio-db-seqfeature-perl libcurl4t64 libdb5.3t64 libgcc-s1 libhttp-message-perl libsqlite3-0 libstdc++6 libsystemd0 libudev1 liburi-perl tzdata 16 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4226 kB of archives. After this operation, 87.0 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 hostname amd64 3.25 [11.0 kB] Get:2 http://deb.debian.org/debian sid/main amd64 gpgv amd64 2.2.44-1 [218 kB] Get:3 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-6 [46.7 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-6 [715 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-6 [72.8 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libaudit-common all 1:4.0.1-1 [12.3 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libaudit1 amd64 1:4.0.1-1 [54.5 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-8 [699 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 256.7-1 [382 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 256.7-1 [145 kB] Get:11 http://deb.debian.org/debian sid/main amd64 tzdata all 2024b-3 [255 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libbio-db-seqfeature-perl all 1.7.5-1 [166 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libcurl4t64 amd64 8.10.1-2 [352 kB] Get:14 http://deb.debian.org/debian sid/main amd64 liburi-perl all 5.30-1 [105 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4226 kB in 0s (48.0 MB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10527 files and directories currently installed.) Preparing to unpack .../libstdc++6_14.2.0-6_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-6) over (14.2.0-3) ... Setting up libstdc++6:amd64 (14.2.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10527 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14.2.0-6_amd64.deb ... Unpacking libgcc-s1:amd64 (14.2.0-6) over (14.2.0-3) ... Setting up libgcc-s1:amd64 (14.2.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10527 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a4.0.1-1_all.deb ... Unpacking libaudit-common (1:4.0.1-1) over (1:3.1.2-4) ... Setting up libaudit-common (1:4.0.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10527 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a4.0.1-1_amd64.deb ... Unpacking libaudit1:amd64 (1:4.0.1-1) over (1:3.1.2-4+b1) ... Setting up libaudit1:amd64 (1:4.0.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10526 files and directories currently installed.) Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-8_amd64.deb ... Unpacking libdb5.3t64:amd64 (5.3.28+dfsg2-8) over (5.3.28+dfsg2-7) ... Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-8) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10526 files and directories currently installed.) Preparing to unpack .../libsystemd0_256.7-1_amd64.deb ... Unpacking libsystemd0:amd64 (256.7-1) over (256.6-1) ... Setting up libsystemd0:amd64 (256.7-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10526 files and directories currently installed.) Preparing to unpack .../libudev1_256.7-1_amd64.deb ... Unpacking libudev1:amd64 (256.7-1) over (256.6-1) ... Setting up libudev1:amd64 (256.7-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10526 files and directories currently installed.) Preparing to unpack .../0-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) over (2024a-4) ... Preparing to unpack .../1-libbio-db-seqfeature-perl_1.7.5-1_all.deb ... Unpacking libbio-db-seqfeature-perl (1.7.5-1) over (1.7.4-2) ... Preparing to unpack .../2-libcurl4t64_8.10.1-2_amd64.deb ... Unpacking libcurl4t64:amd64 (8.10.1-2) over (8.10.1-1) ... Preparing to unpack .../3-liburi-perl_5.30-1_all.deb ... Unpacking liburi-perl (5.30-1) over (5.29-1) ... Preparing to unpack .../4-libhttp-message-perl_7.00-2_all.deb ... Unpacking libhttp-message-perl (7.00-2) over (6.46-1) ... Preparing to unpack .../5-libsqlite3-0_3.46.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.1-1) over (3.46.0-1) ... Setting up libcurl4t64:amd64 (8.10.1-2) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Oct 11 15:36:24 UTC 2024. Universal Time is now: Fri Oct 11 15:36:24 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libbio-db-seqfeature-perl (1.7.5-1) ... Setting up liburi-perl (5.30-1) ... Setting up libhttp-message-perl (7.00-2) ... Processing triggers for libc-bin (2.40-3) ... 0m21.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-yf', 'dist-upgrade'] 0m21.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m22.0s DUMP: a8437af785428afa3d3475ef570d60ba - 0m22.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m22.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'show', '--no-all-versions', 'libbio-db-seqfeature-perl'] 0m22.2s DUMP: Package: libbio-db-seqfeature-perl Version: 1.7.5-1 Installed-Size: 632 Maintainer: Debian Med Packaging Team Architecture: all Replaces: libbio-perl-perl (<< 1.7.3) Depends: perl:any, libbio-perl-perl, libbio-db-gff-perl, libdbd-pg-perl, libdbd-sqlite3-perl, libdbi-perl Breaks: libbio-perl-perl (<< 1.7.3) Description-en: Normalized feature for use with Bio::DB::SeqFeature::Store The Bio::DB::SeqFeature object is the default SeqFeature class stored in Bio::DB::SeqFeature databases. It implements both the Bio::DB::SeqFeature::NormalizedFeatureI and Bio::DB::SeqFeature::NormalizedTableFeatureI interfaces, which means that its subfeatures, if any, are stored in the database in a normalized fashion, and that the parent/child hierarchy of features and subfeatures are also stored in the database as set of tuples. This provides efficiencies in both storage and retrieval speed. . Typically you will not create Bio::DB::SeqFeature directly, but will ask the database to do so on your behalf, as described in Bio::DB::SeqFeature::Store. Description-md5: 3f2313a6f4fd1e332c6c234f6d0f9f7c Homepage: https://metacpan.org/release/Bio-DB-SeqFeature Section: perl Priority: optional Filename: pool/main/libb/libbio-db-seqfeature-perl/libbio-db-seqfeature-perl_1.7.5-1_all.deb Size: 166256 MD5sum: c91178db9077ad376fbaf8695c05c3ac SHA256: db478b568df22554ba74ce46a4bea86e7ac53a5a415ceeae2de4cb13d680f8fa 0m22.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'show', '--no-all-versions', 'libbio-db-seqfeature-perl'] 0m22.2s INFO: apt-cache knows about the following packages: libbio-db-seqfeature-perl 0m22.2s INFO: Running scripts pre_install 0m22.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_database-server'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_database-server'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_exceptions'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_exceptions'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_extras'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_extras'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy'] 0m22.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy', 'libbio-db-seqfeature-perl'] 0m22.4s DUMP: libbio-db-seqfeature-perl: Installed: 1.7.5-1 Candidate: 1.7.5-1 Version table: *** 1.7.5-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m22.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy', 'libbio-db-seqfeature-perl'] 0m22.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-y', 'install', 'libbio-db-seqfeature-perl'] 0m23.1s DUMP: Reading package lists... Building dependency tree... Reading state information... libbio-db-seqfeature-perl is already the newest version (1.7.5-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m23.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-y', 'install', 'libbio-db-seqfeature-perl'] 0m23.1s INFO: Running scripts post_install 0m23.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_install_exceptions'] 0m23.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_install_exceptions'] 0m23.1s INFO: Running scripts post_distupgrade 0m23.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m23.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m23.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_exceptions'] 0m23.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_exceptions'] 0m23.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m23.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m23.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m23.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m23.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_zz_backports'] 0m23.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_distupgrade_zz_backports'] 0m23.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m23.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m23.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m24.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m24.4s INFO: Running scripts pre_install 0m24.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_database-server'] 0m24.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_database-server'] 0m24.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_exceptions'] 0m24.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_exceptions'] 0m24.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_extras'] 0m24.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_extras'] 0m24.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture'] 0m24.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture'] 0m24.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m24.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m24.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy'] 0m24.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m24.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy'] 0m24.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy', 'libbio-db-seqfeature-perl'] 0m24.6s DUMP: libbio-db-seqfeature-perl: Installed: 1.7.5-1 Candidate: 1.7.5-1 Version table: *** 1.7.5-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m24.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-cache', 'policy', 'libbio-db-seqfeature-perl'] 0m24.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-y', 'install', 'libbio-db-seqfeature-perl=1.7.5-1'] 0m25.1s DUMP: Reading package lists... Building dependency tree... Reading state information... libbio-db-seqfeature-perl is already the newest version (1.7.5-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', '-y', 'install', 'libbio-db-seqfeature-perl=1.7.5-1'] 0m25.1s INFO: Running scripts post_install 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_install_exceptions'] 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_install_exceptions'] 0m25.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m25.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m26.8s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', '-ac', '--ignore-obsolete'] 0m28.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', '-ac', '--ignore-obsolete'] 0m28.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m28.2s DUMP: 0.15.6 0m28.2s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m28.2s INFO: Running adequate version 0.15.6 now. 0m28.2s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'libbio-db-seqfeature-perl'] 0m28.3s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'libbio-db-seqfeature-perl'] 0m28.3s INFO: Running scripts pre_remove 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m29.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m29.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m29.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m29.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m29.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m29.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_exceptions'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/pre_remove_exceptions'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m29.6s DUMP: install ok installed apache2-bin apache2-bin 2.4.62-3 install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed ca-certificates ca-certificates 20240203 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-6 install ok installed gpgv gpgv 2.2.44-1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapache-dbi-perl libapache-dbi-perl 1.12-3 install ok installed libapache2-mod-perl2 libapache2-mod-perl2 2.0.13-2 install ok installed libapr1t64:amd64 libapr1t64 1.7.5-1 install ok installed libaprutil1-dbd-sqlite3:amd64 libaprutil1-dbd-sqlite3 1.6.3-3 install ok installed libaprutil1-ldap:amd64 libaprutil1-ldap 1.6.3-3 install ok installed libaprutil1t64:amd64 libaprutil1t64 1.6.3-3 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:4.0.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.0.1-1 install ok installed libbio-db-biofetch-perl libbio-db-biofetch-perl 1.7.3-4 install ok installed libbio-db-gff-perl libbio-db-gff-perl 1.7.4-1 install ok installed libbio-db-seqfeature-perl libbio-db-seqfeature-perl 1.7.5-1 install ok installed libbio-perl-perl libbio-perl-perl 1.7.8-1 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b4 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcgi-pm-perl libcgi-pm-perl 4.66-1 install ok installed libclone-perl:amd64 libclone-perl 0.47-1 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libcurl4t64:amd64 libcurl4t64 8.10.1-2 install ok installed libdata-stag-perl libdata-stag-perl 0.14-3 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-8 install ok installed libdbd-pg-perl libdbd-pg-perl 3.18.0-1+b2 install ok installed libdbd-sqlite3-perl:amd64 libdbd-sqlite3-perl 1.74-1+b2 install ok installed libdbi-perl:amd64 libdbi-perl 1.645-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libdevel-symdump-perl libdevel-symdump-perl 2.18-5 install ok installed libencode-locale-perl libencode-locale-perl 1.05-3 install ok installed libexpat1:amd64 libexpat1 2.6.3-1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libfile-listing-perl libfile-listing-perl 6.16-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgdbm-compat4t64:amd64 libgdbm-compat4t64 1.24-2 install ok installed libgdbm6t64:amd64 libgdbm6t64 1.24-2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libhtml-parser-perl:amd64 libhtml-parser-perl 3.83-1 install ok installed libhtml-tagset-perl libhtml-tagset-perl 3.24-1 install ok installed libhtml-tree-perl libhtml-tree-perl 5.07-3 install ok installed libhttp-cookies-perl libhttp-cookies-perl 6.11-1 install ok installed libhttp-date-perl libhttp-date-perl 6.06-1 install ok installed libhttp-message-perl libhttp-message-perl 7.00-2 install ok installed libhttp-negotiate-perl libhttp-negotiate-perl 6.01-2 install ok installed libicu72:amd64 libicu72 72.1-5 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libio-html-perl libio-html-perl 1.004-3 install ok installed libio-socket-ssl-perl libio-socket-ssl-perl 2.089-1 install ok installed libio-string-perl libio-string-perl 1.08-4 install ok installed libjansson4:amd64 libjansson4 2.14-2+b2 install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-3 install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-3 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.18+dfsg-3 install ok installed liblua5.4-0:amd64 liblua5.4-0 5.4.6-3+b1 install ok installed liblwp-mediatypes-perl liblwp-mediatypes-perl 6.04-2 install ok installed liblwp-protocol-https-perl liblwp-protocol-https-perl 6.14-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libnet-http-perl libnet-http-perl 6.23-1 install ok installed libnet-ssleay-perl:amd64 libnet-ssleay-perl 1.94-1+b1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.63.0-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libperl5.38t64:amd64 libperl5.38t64 5.38.2-5 install ok installed libpq5:amd64 libpq5 17.0-1 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.2-1.1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b4 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-8 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-8 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-1 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.0-7 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-6 install ok installed libsystemd0:amd64 libsystemd0 256.7-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtimedate-perl libtimedate-perl 2.3300-2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libtry-tiny-perl libtry-tiny-perl 0.32-1 install ok installed libudev1:amd64 libudev1 256.7-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed liburi-perl liburi-perl 5.30-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libwww-perl libwww-perl 6.77-1 install ok installed libwww-robotrules-perl libwww-robotrules-perl 6.02-1 install ok installed libxml2:amd64 libxml2 2.12.7+dfsg+really2.9.14-0.1 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed netbase netbase 6.4 install ok installed openssl openssl 3.3.2-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl perl 5.38.2-5 install ok installed perl-base perl-base 5.38.2-5 install ok installed perl-modules-5.38 perl-modules-5.38 5.38.2-5 install ok installed perl-openssl-defaults:amd64 perl-openssl-defaults 7+b2 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-3 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', 'remove', 'apache2-bin', 'ca-certificates', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libbio-db-biofetch-perl', 'libbio-db-gff-perl', 'libbio-perl-perl', 'libbrotli1:amd64', 'libcgi-pm-perl', 'libclone-perl:amd64', 'libcurl4t64:amd64', 'libdata-stag-perl', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdevel-symdump-perl', 'libencode-locale-perl', 'libexpat1:amd64', 'libfile-listing-perl', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgssapi-krb5-2:amd64', 'libhtml-parser-perl:amd64', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhttp-cookies-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libicu72:amd64', 'libio-html-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libjansson4:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'libnet-http-perl', 'libnet-ssleay-perl:amd64', 'libnghttp2-14:amd64', 'libperl5.38t64:amd64', 'libpq5:amd64', 'libpsl5t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtimedate-perl', 'libtry-tiny-perl', 'liburi-perl', 'libwww-perl', 'libwww-robotrules-perl', 'libxml2:amd64', 'netbase', 'openssl', 'perl', 'perl-modules-5.38', 'perl-openssl-defaults:amd64', 'libbio-db-seqfeature-perl'] 0m30.9s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: apache2-bin ca-certificates libapache-dbi-perl libapache2-mod-perl2 libapr1t64 libaprutil1-dbd-sqlite3 libaprutil1-ldap libaprutil1t64 libbio-db-biofetch-perl libbio-db-gff-perl libbio-db-seqfeature-perl libbio-perl-perl libbrotli1 libcgi-pm-perl libclone-perl libcurl4t64 libdata-stag-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdevel-symdump-perl libencode-locale-perl libexpat1 libfile-listing-perl libgdbm-compat4t64 libgdbm6t64 libgssapi-krb5-2 libhtml-parser-perl libhtml-tagset-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libicu72 libio-html-perl libio-socket-ssl-perl libio-string-perl libjansson4 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl libnet-http-perl libnet-ssleay-perl libnghttp2-14 libperl5.38t64 libpq5 libpsl5t64 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libtimedate-perl libtry-tiny-perl liburi-perl libwww-perl libwww-robotrules-perl libxml2 netbase openssl perl perl-modules-5.38 perl-openssl-defaults 0 upgraded, 0 newly installed, 69 to remove and 0 not upgraded. After this operation, 131 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10521 files and directories currently installed.) Removing libbio-db-seqfeature-perl (1.7.5-1) ... Removing libbio-db-gff-perl (1.7.4-1) ... Removing libapache-dbi-perl (1.12-3) ... Removing libapache2-mod-perl2 (2.0.13-2) ... Removing apache2-bin (2.4.62-3) ... Removing libbio-db-biofetch-perl (1.7.3-4) ... Removing libaprutil1-ldap:amd64 (1.6.3-3) ... Removing libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Removing libaprutil1t64:amd64 (1.6.3-3) ... Removing libapr1t64:amd64 (1.7.5-1) ... Removing libbio-perl-perl (1.7.8-1) ... Removing libcurl4t64:amd64 (8.10.1-2) ... Removing libbrotli1:amd64 (1.1.0-2+b4) ... Removing libcgi-pm-perl (4.66-1) ... Removing libdata-stag-perl (0.14-3) ... Removing libdbd-pg-perl (3.18.0-1+b2) ... Removing libdbd-sqlite3-perl:amd64 (1.74-1+b2) ... Removing libdbi-perl:amd64 (1.645-1) ... Removing libdevel-symdump-perl (2.18-5) ... Removing libexpat1:amd64 (2.6.3-1) ... Removing libpq5:amd64 (17.0-1) ... Removing libgssapi-krb5-2:amd64 (1.21.3-3) ... Removing libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Removing libicu72:amd64 (72.1-5) ... Removing libio-string-perl (1.08-4) ... Removing libjansson4:amd64 (2.14-2+b2) ... Removing libkrb5-3:amd64 (1.21.3-3) ... Removing libk5crypto3:amd64 (1.21.3-3) ... Removing libkeyutils1:amd64 (1.6.3-3) ... Removing libkrb5support0:amd64 (1.21.3-3) ... Removing libldap-2.5-0:amd64 (2.5.18+dfsg-3) ... Removing liblua5.4-0:amd64 (5.4.6-3+b1) ... Removing libnghttp2-14:amd64 (1.63.0-1) ... Removing libpsl5t64:amd64 (0.21.2-1.1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Removing libsqlite3-0:amd64 (3.46.1-1) ... Removing libssh2-1t64:amd64 (1.11.0-7) ... Removing libwww-perl (6.77-1) ... Removing liblwp-protocol-https-perl (6.14-1) ... Removing ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libhttp-negotiate-perl (6.01-2) ... Removing libhttp-cookies-perl (6.11-1) ... Removing libhttp-message-perl (7.00-2) ... Removing libclone-perl:amd64 (0.47-1) ... Removing libencode-locale-perl (1.05-3) ... Removing libfile-listing-perl (6.16-1) ... Removing libwww-robotrules-perl (6.02-1) ... Removing libnet-http-perl (6.23-1) ... Removing libhtml-tree-perl (5.07-3) ... Removing libhtml-parser-perl:amd64 (3.83-1) ... Removing liburi-perl (5.30-1) ... Removing libhttp-date-perl (6.06-1) ... Removing libio-socket-ssl-perl (2.089-1) ... Removing libnet-ssleay-perl:amd64 (1.94-1+b1) ... Removing libtry-tiny-perl (0.32-1) ... Removing libhtml-tagset-perl (3.24-1) ... Removing libio-html-perl (1.004-3) ... Removing liblwp-mediatypes-perl (6.04-2) ... Removing libtimedate-perl (2.3300-2) ... Removing netbase (6.4) ... Removing openssl (3.3.2-1) ... Removing perl-openssl-defaults:amd64 (7+b2) ... Removing perl (5.38.2-5) ... Removing libperl5.38t64:amd64 (5.38.2-5) ... Removing libgdbm-compat4t64:amd64 (1.24-2) ... Removing libgdbm6t64:amd64 (1.24-2) ... Removing perl-modules-5.38 (5.38.2-5) ... Processing triggers for libc-bin (2.40-3) ... 0m30.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', 'remove', 'apache2-bin', 'ca-certificates', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libbio-db-biofetch-perl', 'libbio-db-gff-perl', 'libbio-perl-perl', 'libbrotli1:amd64', 'libcgi-pm-perl', 'libclone-perl:amd64', 'libcurl4t64:amd64', 'libdata-stag-perl', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdevel-symdump-perl', 'libencode-locale-perl', 'libexpat1:amd64', 'libfile-listing-perl', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgssapi-krb5-2:amd64', 'libhtml-parser-perl:amd64', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhttp-cookies-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libicu72:amd64', 'libio-html-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libjansson4:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'libnet-http-perl', 'libnet-ssleay-perl:amd64', 'libnghttp2-14:amd64', 'libperl5.38t64:amd64', 'libpq5:amd64', 'libpsl5t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtimedate-perl', 'libtry-tiny-perl', 'liburi-perl', 'libwww-perl', 'libwww-robotrules-perl', 'libxml2:amd64', 'netbase', 'openssl', 'perl', 'perl-modules-5.38', 'perl-openssl-defaults:amd64', 'libbio-db-seqfeature-perl'] 0m30.9s INFO: Running scripts post_remove 0m30.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_remove_exceptions'] 0m30.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_remove_exceptions'] 0m30.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg', '--purge', 'apache2-bin', 'ca-certificates', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libbio-db-biofetch-perl', 'libbio-db-gff-perl', 'libbio-perl-perl', 'libbrotli1:amd64', 'libcgi-pm-perl', 'libclone-perl:amd64', 'libcurl4t64:amd64', 'libdata-stag-perl', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdevel-symdump-perl', 'libencode-locale-perl', 'libexpat1:amd64', 'libfile-listing-perl', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgssapi-krb5-2:amd64', 'libhtml-parser-perl:amd64', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhttp-cookies-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libicu72:amd64', 'libio-html-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libjansson4:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'libnet-http-perl', 'libnet-ssleay-perl:amd64', 'libnghttp2-14:amd64', 'libperl5.38t64:amd64', 'libpq5:amd64', 'libpsl5t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtimedate-perl', 'libtry-tiny-perl', 'liburi-perl', 'libwww-perl', 'libwww-robotrules-perl', 'libxml2:amd64', 'netbase', 'openssl', 'perl', 'perl-modules-5.38', 'perl-openssl-defaults:amd64'] 0m31.1s DUMP: dpkg: warning: ignoring request to remove apache2-bin which isn't installed (Reading database ... 5144 files and directories currently installed.) Purging configuration files for ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. dpkg: warning: ignoring request to remove libapache-dbi-perl which isn't installed Purging configuration files for libapache2-mod-perl2 (2.0.13-2) ... dpkg: warning: ignoring request to remove libapr1t64 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-dbd-sqlite3 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-ldap which isn't installed dpkg: warning: ignoring request to remove libaprutil1t64 which isn't installed dpkg: warning: ignoring request to remove libbio-db-biofetch-perl which isn't installed dpkg: warning: ignoring request to remove libbio-db-gff-perl which isn't installed dpkg: warning: ignoring request to remove libbio-perl-perl which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libcgi-pm-perl which isn't installed dpkg: warning: ignoring request to remove libclone-perl which isn't installed dpkg: warning: ignoring request to remove libcurl4t64 which isn't installed dpkg: warning: ignoring request to remove libdata-stag-perl which isn't installed dpkg: warning: ignoring request to remove libdbd-pg-perl which isn't installed dpkg: warning: ignoring request to remove libdbd-sqlite3-perl which isn't installed dpkg: warning: ignoring request to remove libdbi-perl which isn't installed dpkg: warning: ignoring request to remove libdevel-symdump-perl which isn't installed dpkg: warning: ignoring request to remove libencode-locale-perl which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfile-listing-perl which isn't installed dpkg: warning: ignoring request to remove libgdbm-compat4t64 which isn't installed dpkg: warning: ignoring request to remove libgdbm6t64 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.21.3-3) ... dpkg: warning: ignoring request to remove libhtml-parser-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-tagset-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-tree-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-cookies-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-date-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-message-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-negotiate-perl which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libio-html-perl which isn't installed dpkg: warning: ignoring request to remove libio-socket-ssl-perl which isn't installed dpkg: warning: ignoring request to remove libio-string-perl which isn't installed dpkg: warning: ignoring request to remove libjansson4 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove liblua5.4-0 which isn't installed dpkg: warning: ignoring request to remove liblwp-mediatypes-perl which isn't installed dpkg: warning: ignoring request to remove liblwp-protocol-https-perl which isn't installed dpkg: warning: ignoring request to remove libnet-http-perl which isn't installed dpkg: warning: ignoring request to remove libnet-ssleay-perl which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libperl5.38t64 which isn't installed dpkg: warning: ignoring request to remove libpq5 which isn't installed dpkg: warning: ignoring request to remove libpsl5t64 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1t64 which isn't installed dpkg: warning: ignoring request to remove libtimedate-perl which isn't installed dpkg: warning: ignoring request to remove libtry-tiny-perl which isn't installed dpkg: warning: ignoring request to remove liburi-perl which isn't installed dpkg: warning: ignoring request to remove libwww-perl which isn't installed dpkg: warning: ignoring request to remove libwww-robotrules-perl which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed Purging configuration files for netbase (6.4) ... Purging configuration files for openssl (3.3.2-1) ... Purging configuration files for perl (5.38.2-5) ... dpkg: warning: ignoring request to remove perl-modules-5.38 which isn't installed dpkg: warning: ignoring request to remove perl-openssl-defaults which isn't installed 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg', '--purge', 'apache2-bin', 'ca-certificates', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libbio-db-biofetch-perl', 'libbio-db-gff-perl', 'libbio-perl-perl', 'libbrotli1:amd64', 'libcgi-pm-perl', 'libclone-perl:amd64', 'libcurl4t64:amd64', 'libdata-stag-perl', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdevel-symdump-perl', 'libencode-locale-perl', 'libexpat1:amd64', 'libfile-listing-perl', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgssapi-krb5-2:amd64', 'libhtml-parser-perl:amd64', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhttp-cookies-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libicu72:amd64', 'libio-html-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libjansson4:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'libnet-http-perl', 'libnet-ssleay-perl:amd64', 'libnghttp2-14:amd64', 'libperl5.38t64:amd64', 'libpq5:amd64', 'libpsl5t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtimedate-perl', 'libtry-tiny-perl', 'liburi-perl', 'libwww-perl', 'libwww-robotrules-perl', 'libxml2:amd64', 'netbase', 'openssl', 'perl', 'perl-modules-5.38', 'perl-openssl-defaults:amd64'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg', '--purge', 'libbio-db-seqfeature-perl'] 0m31.1s DUMP: dpkg: warning: ignoring request to remove libbio-db-seqfeature-perl which isn't installed 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg', '--purge', 'libbio-db-seqfeature-perl'] 0m31.1s INFO: Running scripts post_purge 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_purge_exceptions'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_purge_exceptions'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg', '--purge', '--pending'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg', '--purge', '--pending'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg', '--remove', '--pending'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg', '--remove', '--pending'] 0m31.1s INFO: Running scripts post_test 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_test_exceptions'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'tmp/scripts/post_test_exceptions'] 0m31.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m31.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m31.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg-divert', '--list'] 0m31.6s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'dpkg-divert', '--list'] 0m31.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', 'clean'] 0m31.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphinvbt7p', 'apt-get', 'clean'] 0m31.6s DEBUG: Recording chroot state 0m32.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/shm'] 0m32.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/shm'] 0m32.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/console'] 0m32.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/console'] 0m32.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/ptmx'] 0m32.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/ptmx'] 0m32.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/pts'] 0m32.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/dev/pts'] 0m32.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/proc'] 0m32.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphinvbt7p/proc'] 0m32.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m32.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmphinvbt7p'] 0m32.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmphinvbt7p 0m32.6s INFO: PASS: Upgrading between Debian distributions. 0m32.6s INFO: PASS: All tests. 0m32.6s INFO: piuparts run ends. ret=0 End: 2024-10-11 15:36:35 GMT