Start: 2022-11-09 04:18:43 GMT [testing] Package: libgclib-dev Source: libgclib (0.12.7+ds-4) Version: 0.12.7+ds-4+b1 Installed-Size: 594 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libgclib3 (= 0.12.7+ds-4+b1) Description: header files for Genome Code Lib (GCLib) Multi-Arch: same Homepage: https://github.com/gpertea/gclib Description-md5: 9e6c6f2bb41b72b6ec6259d6e96c5a26 Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/libg/libgclib/libgclib-dev_0.12.7+ds-4+b1_amd64.deb Size: 131000 MD5sum: bfdf8710c6ac745d28a05fe5390d5f37 SHA256: d9310b59ae31c07686a4a64fefe9c07a64b0d7549cfc1c0700747e8ed1e0ae23 [sid] Package: libgclib-dev Source: libgclib Version: 0.12.7+ds-5 Installed-Size: 1230 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libgclib3 (= 0.12.7+ds-5) Description: header files for Genome Code Lib (GCLib) Multi-Arch: same Homepage: https://github.com/gpertea/gclib Description-md5: 9e6c6f2bb41b72b6ec6259d6e96c5a26 Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/libg/libgclib/libgclib-dev_0.12.7+ds-5_amd64.deb Size: 277800 MD5sum: 2cec4ec8db7d74cfb1828ca7eae99c7a SHA256: 80be6c7aa11b54b18a780aca4a91347f44f834d442635353c456362e63bdab50 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libgclib-dev=0.12.7+ds-5 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libgclib-dev=0.12.7+ds-5 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-19-amd64 #1 SMP Debian 5.10.149-2 (2022-10-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp5hqwpuzw 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp5hqwpuzw 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m1.9s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/proc'] 0m2.0s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/proc'] 0m2.0s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/pts'] 0m2.0s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/pts'] 0m2.0s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/ptmx'] 0m2.0s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/ptmx'] 0m2.0s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/console'] 0m2.0s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/console'] 0m2.0s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/shm'] 0m2.0s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/shm'] 0m2.0s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m2.0s DEBUG: Created policy-rc.d and chmodded it. 0m2.0s DEBUG: Created resolv.conf. 0m2.0s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp5hqwpuzw/tmp/scripts/ 0m2.0s INFO: Running scripts post_chroot_unpack 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', 'update'] 0m5.1s DUMP: Get:1 http://deb.debian.org/debian bookworm InRelease [164 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 Packages [8742 kB] Get:3 http://deb.debian.org/debian bookworm/main Translation-en [5909 kB] Fetched 14.8 MB in 2s (6489 kB/s) Reading package lists... 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', 'update'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-yf', 'dist-upgrade'] 0m5.6s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-yf', 'dist-upgrade'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.0s DUMP: 1e1c9396a5b751d15068bb39fefc82be - 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.0s INFO: Running scripts post_setup 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_dummy_users'] 0m7.0s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_dummy_users'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_forbid_home'] 0m7.0s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_forbid_home'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.0s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_minimize'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_minimize'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_zz_backports'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_setup_zz_backports'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.0s DUMP: install ok installed apt apt 2.5.4 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2-2+b1 install ok installed bsdutils bsdutils 1:2.38.1-1.1+b1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-9 install ok installed debconf debconf 1.5.79 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.3 install ok installed diffutils diffutils 1:3.8-1 install ok installed dpkg dpkg 1.21.9+b1 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1+b1 install ok installed findutils findutils 4.9.0-3 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-9 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.4 install ok installed libattr1:amd64 libattr1 1:2.5.1-1 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b1 install ok installed libblkid1:amd64 libblkid1 2.38.1-1.1+b1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-4 install ok installed libc6:amd64 libc6 2.36-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b1 install ok installed libcap2:amd64 libcap2 1:2.44-1 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.30-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.264 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-2 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-9 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-2 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.45-2 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.2.7-0.1 install ok installed libmount1:amd64 libmount1 2.38.1-1.1+b1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-5 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-5 install ok installed libpam-runtime libpam-runtime 1.5.2-5 install ok installed libpam0g:amd64 libpam0g 1.5.2-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-2 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b1 install ok installed libselinux1:amd64 libselinux1 3.4-1+b2 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b2 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-1.1+b1 install ok installed libss2:amd64 libss2 1.46.6~rc1-1+b1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-9 install ok installed libsystemd0:amd64 libsystemd0 252-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.3+20220423-2 install ok installed libudev1:amd64 libudev1 252-2 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-1.1+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg-1 install ok installed login login 1:4.12.3+dfsg1-2 install ok installed logsave logsave 1.46.6~rc1-1+b1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-1.1+b1 install ok installed ncurses-base ncurses-base 6.3+20220423-2 install ok installed ncurses-bin ncurses-bin 6.3+20220423-2 install ok installed passwd passwd 1:4.12.3+dfsg1-2 install ok installed perl perl 5.36.0-4 install ok installed perl-base perl-base 5.36.0-4 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-4 install ok installed sed sed 4.8-1 install ok installed sysvinit-utils sysvinit-utils 3.05-6 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2022f-1 install ok installed usr-is-merged usr-is-merged 33 install ok installed usrmerge usrmerge 33 install ok installed util-linux util-linux 2.38.1-1.1+b1 install ok installed util-linux-extra util-linux-extra 2.38.1-1.1+b1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-4.1 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.0s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m7.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m7.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m7.5s INFO: Running scripts is_testable 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/is_testable_uninstallable'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/is_testable_uninstallable'] 0m7.5s INFO: Running scripts pre_test 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_test_exceptions'] 0m7.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_test_exceptions'] 0m7.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_test_root_password'] 0m7.6s DUMP: New password: Retype new password: passwd: password updated successfully 0m7.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_test_root_password'] 0m7.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'show', '--no-all-versions', 'libgclib-dev'] 0m7.8s DUMP: Package: libgclib-dev Source: libgclib (0.12.7+ds-4) Version: 0.12.7+ds-4+b1 Installed-Size: 594 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libgclib3 (= 0.12.7+ds-4+b1) Description-en: header files for Genome Code Lib (GCLib) This is an eclectic gathering of (mostly) C++ code which upstream used for some bioinformatics projects. The main idea is to provide lean code and efficient data structures, trying to avoid too many code dependencies of heavy libraries while minimizing production cycles (and this also implies a decent compile/build time -- looking at you, bloated configure scripts and lengthy compile times of Boost code or other heavy C++ template code..). . This code was gathered even before the C++ STL had been fully adopted as a cross-platform "standard". Since STL by itself is a bit heavier for most of the C++ needs, it is preferred to use simpler&leaner C++ classes or templates for basic strings, containers, basic algorithms etc. . Header files of Genome Code Lib. It is mainly known for being used by StringTie but with its own release cycle. Description-md5: 9e6c6f2bb41b72b6ec6259d6e96c5a26 Multi-Arch: same Homepage: https://github.com/gpertea/gclib Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/libg/libgclib/libgclib-dev_0.12.7+ds-4+b1_amd64.deb Size: 131000 MD5sum: bfdf8710c6ac745d28a05fe5390d5f37 SHA256: d9310b59ae31c07686a4a64fefe9c07a64b0d7549cfc1c0700747e8ed1e0ae23 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'show', '--no-all-versions', 'libgclib-dev'] 0m7.8s INFO: apt-cache knows about the following packages: libgclib-dev 0m7.8s INFO: Running scripts pre_install 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_database-server'] 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_database-server'] 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_exceptions'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_exceptions'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_extras'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_extras'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy'] 0m8.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release o=Debian,a=testing,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy', 'libgclib-dev'] 0m8.0s DUMP: libgclib-dev: Installed: (none) Candidate: 0.12.7+ds-4+b1 Version table: 0.12.7+ds-4+b1 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy', 'libgclib-dev'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-y', 'install', 'libgclib-dev'] 0m9.0s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: libgclib3 The following NEW packages will be installed: libgclib-dev libgclib3 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 283 kB of archives. After this operation, 1017 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 libgclib3 amd64 0.12.7+ds-4+b1 [152 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libgclib-dev amd64 0.12.7+ds-4+b1 [131 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 283 kB in 0s (4287 kB/s) Selecting previously unselected package libgclib3:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8606 files and directories currently installed.) Preparing to unpack .../libgclib3_0.12.7+ds-4+b1_amd64.deb ... Unpacking libgclib3:amd64 (0.12.7+ds-4+b1) ... Selecting previously unselected package libgclib-dev:amd64. Preparing to unpack .../libgclib-dev_0.12.7+ds-4+b1_amd64.deb ... Unpacking libgclib-dev:amd64 (0.12.7+ds-4+b1) ... Setting up libgclib3:amd64 (0.12.7+ds-4+b1) ... Setting up libgclib-dev:amd64 (0.12.7+ds-4+b1) ... Processing triggers for libc-bin (2.36-4) ... 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-y', 'install', 'libgclib-dev'] 0m9.0s INFO: Running scripts post_install 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_install_exceptions'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_install_exceptions'] 0m9.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m9.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m9.5s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp5hqwpuzw to sid 0m9.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m9.5s INFO: Running scripts pre_distupgrade 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_exceptions'] 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_exceptions'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m9.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m9.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', 'update'] 0m13.7s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [161 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9388 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6939 kB] Fetched 16.5 MB in 3s (5000 kB/s) Reading package lists... 0m13.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', 'update'] 0m13.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-yf', 'dist-upgrade'] 0m15.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: debianutils libgclib-dev libgclib3 libgnutls30 libgpg-error0 libsystemd0 libudev1 login passwd zlib1g 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4095 kB of archives. After this operation, 614 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 debianutils amd64 5.7-0.4 [102 kB] Get:2 http://deb.debian.org/debian sid/main amd64 login amd64 1:4.12.3+dfsg1-3 [606 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libgnutls30 amd64 3.7.8-4 [1389 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libgpg-error0 amd64 1.46-1 [76.9 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 252.1-1 [328 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 252.1-1 [106 kB] Get:7 http://deb.debian.org/debian sid/main amd64 zlib1g amd64 1:1.2.13.dfsg-1 [86.7 kB] Get:8 http://deb.debian.org/debian sid/main amd64 passwd amd64 1:4.12.3+dfsg1-3 [972 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libgclib-dev amd64 0.12.7+ds-5 [278 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libgclib3 amd64 0.12.7+ds-5 [152 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4095 kB in 0s (38.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8652 files and directories currently installed.) Preparing to unpack .../debianutils_5.7-0.4_amd64.deb ... Unpacking debianutils (5.7-0.4) over (5.7-0.3) ... Setting up debianutils (5.7-0.4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8652 files and directories currently installed.) Preparing to unpack .../login_1%3a4.12.3+dfsg1-3_amd64.deb ... Unpacking login (1:4.12.3+dfsg1-3) over (1:4.12.3+dfsg1-2) ... Setting up login (1:4.12.3+dfsg1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8652 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.7.8-4_amd64.deb ... Unpacking libgnutls30:amd64 (3.7.8-4) over (3.7.8-2) ... Setting up libgnutls30:amd64 (3.7.8-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8652 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.46-1_amd64.deb ... Unpacking libgpg-error0:amd64 (1.46-1) over (1.45-2) ... Setting up libgpg-error0:amd64 (1.46-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8652 files and directories currently installed.) Preparing to unpack .../libsystemd0_252.1-1_amd64.deb ... Unpacking libsystemd0:amd64 (252.1-1) over (252-2) ... Setting up libsystemd0:amd64 (252.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8652 files and directories currently installed.) Preparing to unpack .../libudev1_252.1-1_amd64.deb ... Unpacking libudev1:amd64 (252.1-1) over (252-2) ... Setting up libudev1:amd64 (252.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8652 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.2.13.dfsg-1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.13.dfsg-1) over (1:1.2.11.dfsg-4.1) ... Setting up zlib1g:amd64 (1:1.2.13.dfsg-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8652 files and directories currently installed.) Preparing to unpack .../passwd_1%3a4.12.3+dfsg1-3_amd64.deb ... Unpacking passwd (1:4.12.3+dfsg1-3) over (1:4.12.3+dfsg1-2) ... Preparing to unpack .../libgclib-dev_0.12.7+ds-5_amd64.deb ... Unpacking libgclib-dev:amd64 (0.12.7+ds-5) over (0.12.7+ds-4+b1) ... Preparing to unpack .../libgclib3_0.12.7+ds-5_amd64.deb ... Unpacking libgclib3:amd64 (0.12.7+ds-5) over (0.12.7+ds-4+b1) ... Setting up passwd (1:4.12.3+dfsg1-3) ... Setting up libgclib3:amd64 (0.12.7+ds-5) ... Setting up libgclib-dev:amd64 (0.12.7+ds-5) ... Processing triggers for libc-bin (2.36-4) ... 0m15.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-yf', 'dist-upgrade'] 0m15.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m16.1s DUMP: 51d3e2df317b096b8bb6d0fe31e35d28 - 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'show', '--no-all-versions', 'libgclib-dev'] 0m16.3s DUMP: Package: libgclib-dev Source: libgclib Version: 0.12.7+ds-5 Installed-Size: 1230 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libgclib3 (= 0.12.7+ds-5) Description-en: header files for Genome Code Lib (GCLib) This is an eclectic gathering of (mostly) C++ code which upstream used for some bioinformatics projects. The main idea is to provide lean code and efficient data structures, trying to avoid too many code dependencies of heavy libraries while minimizing production cycles (and this also implies a decent compile/build time -- looking at you, bloated configure scripts and lengthy compile times of Boost code or other heavy C++ template code..). . This code was gathered even before the C++ STL had been fully adopted as a cross-platform "standard". Since STL by itself is a bit heavier for most of the C++ needs, it is preferred to use simpler&leaner C++ classes or templates for basic strings, containers, basic algorithms etc. . Header files of Genome Code Lib. It is mainly known for being used by StringTie but with its own release cycle. Description-md5: 9e6c6f2bb41b72b6ec6259d6e96c5a26 Multi-Arch: same Homepage: https://github.com/gpertea/gclib Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/libg/libgclib/libgclib-dev_0.12.7+ds-5_amd64.deb Size: 277800 MD5sum: 2cec4ec8db7d74cfb1828ca7eae99c7a SHA256: 80be6c7aa11b54b18a780aca4a91347f44f834d442635353c456362e63bdab50 0m16.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'show', '--no-all-versions', 'libgclib-dev'] 0m16.3s INFO: apt-cache knows about the following packages: libgclib-dev 0m16.3s INFO: Running scripts pre_install 0m16.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_database-server'] 0m16.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_database-server'] 0m16.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_exceptions'] 0m16.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_exceptions'] 0m16.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_extras'] 0m16.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_extras'] 0m16.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture'] 0m16.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture'] 0m16.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m16.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m16.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy'] 0m16.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m16.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy'] 0m16.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy', 'libgclib-dev'] 0m16.5s DUMP: libgclib-dev: Installed: 0.12.7+ds-5 Candidate: 0.12.7+ds-5 Version table: *** 0.12.7+ds-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m16.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy', 'libgclib-dev'] 0m16.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-y', 'install', 'libgclib-dev'] 0m16.9s DUMP: Reading package lists... Building dependency tree... Reading state information... libgclib-dev is already the newest version (0.12.7+ds-5). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-y', 'install', 'libgclib-dev'] 0m16.9s INFO: Running scripts post_install 0m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_install_exceptions'] 0m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_install_exceptions'] 0m16.9s INFO: Running scripts post_distupgrade 0m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_exceptions'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_exceptions'] 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m17.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_zz_backports'] 0m17.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_distupgrade_zz_backports'] 0m17.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m17.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m17.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m17.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m17.8s INFO: Running scripts pre_install 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_database-server'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_database-server'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_exceptions'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_exceptions'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_extras'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_extras'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy'] 0m17.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m17.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy'] 0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy', 'libgclib-dev'] 0m17.9s DUMP: libgclib-dev: Installed: 0.12.7+ds-5 Candidate: 0.12.7+ds-5 Version table: *** 0.12.7+ds-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m17.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-cache', 'policy', 'libgclib-dev'] 0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-y', 'install', 'libgclib-dev=0.12.7+ds-5'] 0m18.5s DUMP: Reading package lists... Building dependency tree... Reading state information... libgclib-dev is already the newest version (0.12.7+ds-5). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', '-y', 'install', 'libgclib-dev=0.12.7+ds-5'] 0m18.5s INFO: Running scripts post_install 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_install_exceptions'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_install_exceptions'] 0m18.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m18.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m19.5s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', '-ac', '--ignore-obsolete'] 0m20.5s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', '-ac', '--ignore-obsolete'] 0m20.5s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m20.5s DUMP: 0.15.6 0m20.5s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m20.5s INFO: Running adequate version 0.15.6 now. 0m20.5s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'libgclib-dev'] 0m20.6s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'libgclib-dev'] 0m20.6s INFO: Running scripts pre_remove 0m20.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m20.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m20.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m20.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m20.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m21.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m21.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m21.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m21.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m21.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m21.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_exceptions'] 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/pre_remove_exceptions'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m21.6s DUMP: install ok installed apt apt 2.5.4 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2-2+b1 install ok installed bsdutils bsdutils 1:2.38.1-1.1+b1 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-9 install ok installed debconf debconf 1.5.79 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-1 install ok installed dpkg dpkg 1.21.9+b1 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1+b1 install ok installed findutils findutils 4.9.0-3 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-9 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.4 install ok installed libattr1:amd64 libattr1 1:2.5.1-1 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b1 install ok installed libblkid1:amd64 libblkid1 2.38.1-1.1+b1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-4 install ok installed libc6:amd64 libc6 2.36-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b1 install ok installed libcap2:amd64 libcap2 1:2.44-1 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.30-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.264 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-2 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-9 install ok installed libgclib-dev:amd64 libgclib-dev 0.12.7+ds-5 install ok installed libgclib3:amd64 libgclib3 0.12.7+ds-5 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-2 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.2.7-0.1 install ok installed libmount1:amd64 libmount1 2.38.1-1.1+b1 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-5 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-5 install ok installed libpam-runtime libpam-runtime 1.5.2-5 install ok installed libpam0g:amd64 libpam0g 1.5.2-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-2 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b1 install ok installed libselinux1:amd64 libselinux1 3.4-1+b2 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b2 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-1.1+b1 install ok installed libss2:amd64 libss2 1.46.6~rc1-1+b1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-9 install ok installed libsystemd0:amd64 libsystemd0 252.1-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.3+20220423-2 install ok installed libudev1:amd64 libudev1 252.1-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-1.1+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg-1 install ok installed login login 1:4.12.3+dfsg1-3 install ok installed logsave logsave 1.46.6~rc1-1+b1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-1.1+b1 install ok installed ncurses-base ncurses-base 6.3+20220423-2 install ok installed ncurses-bin ncurses-bin 6.3+20220423-2 install ok installed passwd passwd 1:4.12.3+dfsg1-3 install ok installed perl perl 5.36.0-4 install ok installed perl-base perl-base 5.36.0-4 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-4 install ok installed sed sed 4.8-1 install ok installed sysvinit-utils sysvinit-utils 3.05-6 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2022f-1 install ok installed usr-is-merged usr-is-merged 33 install ok installed usrmerge usrmerge 33 install ok installed util-linux util-linux 2.38.1-1.1+b1 install ok installed util-linux-extra util-linux-extra 2.38.1-1.1+b1 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', 'remove', 'libgclib-dev:amd64', 'libgclib3:amd64'] 0m22.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libgclib-dev libgclib3 0 upgraded, 0 newly installed, 2 to remove and 0 not upgraded. After this operation, 1667 kB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8650 files and directories currently installed.) Removing libgclib-dev:amd64 (0.12.7+ds-5) ... Removing libgclib3:amd64 (0.12.7+ds-5) ... Processing triggers for libc-bin (2.36-4) ... 0m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', 'remove', 'libgclib-dev:amd64', 'libgclib3:amd64'] 0m22.6s INFO: Running scripts post_remove 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_remove_exceptions'] 0m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_remove_exceptions'] 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg', '--purge', 'libgclib-dev:amd64', 'libgclib3:amd64'] 0m22.6s DUMP: dpkg: warning: ignoring request to remove libgclib-dev which isn't installed dpkg: warning: ignoring request to remove libgclib3 which isn't installed 0m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg', '--purge', 'libgclib-dev:amd64', 'libgclib3:amd64'] 0m22.6s INFO: Running scripts post_purge 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_purge_exceptions'] 0m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_purge_exceptions'] 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg', '--purge', '--pending'] 0m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg', '--purge', '--pending'] 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg', '--remove', '--pending'] 0m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg', '--remove', '--pending'] 0m22.6s INFO: Running scripts post_test 0m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_test_exceptions'] 0m22.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'tmp/scripts/post_test_exceptions'] 0m22.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m23.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m23.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg-divert', '--list'] 0m23.0s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m23.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'dpkg-divert', '--list'] 0m23.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', 'clean'] 0m23.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw', 'apt-get', 'clean'] 0m23.0s DEBUG: Recording chroot state 0m23.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/shm'] 0m23.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/shm'] 0m23.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/console'] 0m23.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/console'] 0m23.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/ptmx'] 0m23.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/ptmx'] 0m23.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/pts'] 0m23.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/dev/pts'] 0m23.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/proc'] 0m24.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw/proc'] 0m24.0s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m24.1s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp5hqwpuzw'] 0m24.1s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp5hqwpuzw 0m24.1s INFO: PASS: Upgrading between Debian distributions. 0m24.1s INFO: PASS: All tests. 0m24.1s INFO: piuparts run ends. ret=0 End: 2022-11-09 04:19:07 GMT