Start: 2026-10-08 10:35:22 GMT [testing] Package: libmems-dev Source: libmems (1.6.0+4725-13) Version: 1.6.0+4725-13+b1 Installed-Size: 6564 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libmems-1.6-dev Depends: libmems1t64 (= 1.6.0+4725-13+b1), libboost-filesystem1.90-dev, libboost-iostreams1.90-dev, libgenome-dev, libmuscle-dev Description: development library to support DNA string matching and comparative genomics Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/libMems/trunk/ Description-md5: d69753138606636bd9743d8705e86fd7 Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/libm/libmems/libmems-dev_1.6.0+4725-13+b1_amd64.deb Size: 976840 MD5sum: 338bf790e6e0219238d953d55b2f3752 SHA256: 686509aeff04635a4784f2ff54a207acbe191eff8c1f602e9d736e52f8436f26 [sid] Package: libmems-dev Source: libmems (1.6.0+4725-13) Version: 1.6.0+4725-13+b2 Installed-Size: 6858 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libmems-1.6-dev Depends: libmems1t64 (= 1.6.0+4725-13+b2), libboost-filesystem1.92-dev, libboost-iostreams1.92-dev, libgenome-dev, libmuscle-dev Description: development library to support DNA string matching and comparative genomics Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/libMems/trunk/ Description-md5: d69753138606636bd9743d8705e86fd7 Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/libm/libmems/libmems-dev_1.6.0+4725-13+b2_amd64.deb Size: 1118292 MD5sum: f61a464ff1b5285079a6b1fc46c129d8 SHA256: 13ce48aabf1cada4b2976a93961e5e746fd62a0fb85f52820dfef663717b5967 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libmems-dev=1.6.0+4725-13+b2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202608291513~1.6.0-23-g1172a6e5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libmems-dev=1.6.0+4725-13+b2 0m0.0s INFO: Running on: Linux piu-slave-conova-01 6.12.111+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.111-1 (2026-09-28) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpenqb9hr0 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpenqb9hr0 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/pts'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/pts'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/ptmx'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/13', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/console'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/13', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/console'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/shm'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/shm'] 0m0.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ forky main 0m0.4s DEBUG: Created policy-rc.d and chmodded it. 0m0.4s DEBUG: Created resolv.conf. 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpenqb9hr0/tmp/scripts/ 0m0.4s INFO: Running scripts post_chroot_unpack 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', 'update'] 0m2.4s DUMP: Get:1 http://deb.debian.org/debian forky InRelease [151 kB] Get:2 http://deb.debian.org/debian forky/main amd64 Packages [9993 kB] Get:3 http://deb.debian.org/debian forky/main Translation-en [6617 kB] Fetched 16.8 MB in 1s (14.6 MB/s) Reading package lists... 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', 'update'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-yf', 'dist-upgrade'] 0m5.0s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: bsdutils libblkid1 libmd0 libmount1 libsmartcols1 libuuid1 login login.defs mount passwd tzdata util-linux 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4079 kB of archives. After this operation, 98.3 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian forky/main amd64 libuuid1 amd64 2.42.4-1 [34.5 kB] Get:2 http://deb.debian.org/debian forky/main amd64 libblkid1 amd64 2.42.4-1 [185 kB] Get:3 http://deb.debian.org/debian forky/main amd64 libmount1 amd64 2.42.4-1 [232 kB] Get:4 http://deb.debian.org/debian forky/main amd64 libsmartcols1 amd64 2.42.4-1 [153 kB] Get:5 http://deb.debian.org/debian forky/main amd64 util-linux amd64 2.42.4-1 [1254 kB] Get:6 http://deb.debian.org/debian forky/main amd64 mount amd64 2.42.4-1 [172 kB] Get:7 http://deb.debian.org/debian forky/main amd64 login amd64 1:4.16.0-2+really2.42.4-1 [124 kB] Get:8 http://deb.debian.org/debian forky/main amd64 libmd0 amd64 1.3.0-1 [45.4 kB] Get:9 http://deb.debian.org/debian forky/main amd64 bsdutils amd64 1:2.42.4-1 [92.9 kB] Get:10 http://deb.debian.org/debian forky/main amd64 login.defs all 1:4.20.2-2 [223 kB] Get:11 http://deb.debian.org/debian forky/main amd64 passwd amd64 1:4.20.2-2 [1300 kB] Get:12 http://deb.debian.org/debian forky/main amd64 tzdata all 2026e-1 [262 kB] Preconfiguring packages ... Fetched 4079 kB in 0s (45.5 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4959 files and directories currently installed.) Preparing to unpack .../libuuid1_2.42.4-1_amd64.deb ... Unpacking libuuid1:amd64 (2.42.4-1) over (2.42.3-1) ... Setting up libuuid1:amd64 (2.42.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4959 files and directories currently installed.) Preparing to unpack .../libblkid1_2.42.4-1_amd64.deb ... Unpacking libblkid1:amd64 (2.42.4-1) over (2.42.3-1) ... Setting up libblkid1:amd64 (2.42.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4959 files and directories currently installed.) Preparing to unpack .../libmount1_2.42.4-1_amd64.deb ... Unpacking libmount1:amd64 (2.42.4-1) over (2.42.3-1) ... Setting up libmount1:amd64 (2.42.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4959 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.42.4-1_amd64.deb ... Unpacking libsmartcols1:amd64 (2.42.4-1) over (2.42.3-1) ... Setting up libsmartcols1:amd64 (2.42.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4959 files and directories currently installed.) Preparing to unpack .../util-linux_2.42.4-1_amd64.deb ... Unpacking util-linux (2.42.4-1) over (2.42.3-1) ... Setting up util-linux (2.42.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4960 files and directories currently installed.) Preparing to unpack .../mount_2.42.4-1_amd64.deb ... Unpacking mount (2.42.4-1) over (2.42.3-1) ... Preparing to unpack .../login_1%3a4.16.0-2+really2.42.4-1_amd64.deb ... Unpacking login (1:4.16.0-2+really2.42.4-1) over (1:4.16.0-2+really2.42.3-1) ... Preparing to unpack .../libmd0_1.3.0-1_amd64.deb ... Unpacking libmd0:amd64 (1.3.0-1) over (1.2.0-2) ... Setting up libmd0:amd64 (1.3.0-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4960 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.42.4-1_amd64.deb ... Unpacking bsdutils (1:2.42.4-1) over (1:2.42.3-1) ... Preparing to unpack .../login.defs_1%3a4.20.2-2_all.deb ... Unpacking login.defs (1:4.20.2-2) over (1:4.19.3-2) ... Preparing to unpack .../passwd_1%3a4.20.2-2_amd64.deb ... Unpacking passwd (1:4.20.2-2) over (1:4.19.3-2) ... Preparing to unpack .../tzdata_2026e-1_all.deb ... Unpacking tzdata (2026e-1) over (2026c-1) ... Setting up bsdutils (1:2.42.4-1) ... Setting up login.defs (1:4.20.2-2) ... Installing new version of config file /etc/login.defs ... Setting up tzdata (2026e-1) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Oct 8 10:35:27 UTC 2026. Universal Time is now: Thu Oct 8 10:35:27 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up passwd (1:4.20.2-2) ... Setting up mount (2.42.4-1) ... Setting up login (1:4.16.0-2+really2.42.4-1) ... Processing triggers for libc-bin (2.43-6) ... 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-yf', 'dist-upgrade'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.5s DUMP: d08f8b64854f02549db22334ae5e0815 - 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.5s INFO: Running scripts post_setup 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_dummy_users'] 0m6.0s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_dummy_users'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_forbid_home'] 0m6.0s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_forbid_home'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.0s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_minimize'] 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_minimize'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_zz_backports'] 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_setup_zz_backports'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.1s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.11 install ok installed findutils findutils 4.11.0-2 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-3 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b2 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-6 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-6 install ok installed libc6:amd64 libc6 2.43-6 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-3 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-3 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b1 install ok installed libselinux1:amd64 libselinux1 3.11-2.1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b1 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libssl3t64:amd64 libssl3t64 3.6.4-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 262-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 262-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.2-2 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed mount mount 2.42.4-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.4-1 install ok installed passwd passwd 1:4.20.2-2 install ok installed perl-base perl-base 5.42.3-1 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-6 install ok installed tzdata tzdata 2026e-1 install ok installed util-linux util-linux 2.42.4-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.1s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m6.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m6.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m6.4s INFO: Running scripts is_testable 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/is_testable_uninstallable'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/is_testable_uninstallable'] 0m6.4s INFO: Running scripts pre_test 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_test_exceptions'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_test_exceptions'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_test_root_password'] 0m6.4s DUMP: New password: Retype new password: passwd: password updated successfully 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_test_root_password'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'show', '--no-all-versions', 'libmems-dev'] 0m6.7s DUMP: Package: libmems-dev Source: libmems (1.6.0+4725-13) Version: 1.6.0+4725-13+b1 Installed-Size: 6564 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libmems-1.6-dev Depends: libmems1t64 (= 1.6.0+4725-13+b1), libboost-filesystem1.90-dev, libboost-iostreams1.90-dev, libgenome-dev, libmuscle-dev Description-en: development library to support DNA string matching and comparative genomics libMems is a freely available software development library to support DNA string matching and comparative genomics. Among other things, libMems implements an algorithm to perform approximate multi-MUM and multi-MEM identification. The algorithm uses spaced seed patterns in conjunction with a seed-and-extend style hashing method to identify matches. The method is efficient, requiring a maximum of only 16 bytes per base of the largest input sequence, and this data can be stored externally (i.e. on disk) to further reduce memory requirements. . This is the development package containing the statically linked library and the header files. Description-md5: d69753138606636bd9743d8705e86fd7 Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/libMems/trunk/ Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/libm/libmems/libmems-dev_1.6.0+4725-13+b1_amd64.deb Size: 976840 MD5sum: 338bf790e6e0219238d953d55b2f3752 SHA256: 686509aeff04635a4784f2ff54a207acbe191eff8c1f602e9d736e52f8436f26 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'show', '--no-all-versions', 'libmems-dev'] 0m6.7s INFO: apt-cache knows about the following packages: libmems-dev 0m6.7s INFO: Running scripts pre_install 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_database-server'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_database-server'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_exceptions'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_exceptions'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_extras'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_extras'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy'] 0m6.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian forky/main amd64 Packages release o=Debian,a=testing,n=forky,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy', 'libmems-dev'] 0m6.8s DUMP: libmems-dev: Installed: (none) Candidate: 1.6.0+4725-13+b1 Version table: 1.6.0+4725-13+b1 500 500 http://deb.debian.org/debian forky/main amd64 Packages 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy', 'libmems-dev'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-y', 'install', 'libmems-dev'] 0m12.4s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following additional packages will be installed: libasan8 libatomic1 libboost-atomic1.90-dev libboost-atomic1.90.0 libboost-filesystem1.90-dev libboost-filesystem1.90.0 libboost-iostreams1.90-dev libboost-iostreams1.90.0 libboost-random1.90-dev libboost-random1.90.0 libboost-regex1.90-dev libboost-regex1.90.0 libboost1.90-dev libc-dev-bin libc6-dev libgcc-16-dev libgenome-dev libgenome0 libgomp1 libhwasan0 libitm1 liblsan0 libmems1t64 libmuscle-dev libmuscle1 libquadmath0 libstdc++-16-dev libtsan2 libubsan1 linux-libc-dev Suggested packages: libboost1.90-doc libboost-chrono1.90-dev libboost-container1.90-dev libboost-context1.90-dev libboost-contract1.90-dev libboost-coroutine1.90-dev libboost-date-time1.90-dev libboost-exception1.90-dev libboost-fiber1.90-dev libboost-graph-parallel1.90-dev libboost-graph1.90-dev libboost-json1.90-dev libboost-locale1.90-dev libboost-log1.90-dev libboost-math1.90-dev libboost-mpi-python1.90-dev libboost-mpi1.90-dev libboost-nowide1.90-dev libboost-numpy1.90-dev libboost-program-options1.90-dev libboost-python1.90-dev libboost-serialization1.90-dev libboost-stacktrace1.90-dev libboost-test1.90-dev libboost-thread1.90-dev libboost-timer1.90-dev libboost-type-erasure1.90-dev libboost-url1.90-dev libboost-wave1.90-dev libboost1.90-tools-dev libmpfrc++-dev libntl-dev libc-devtools glibc-doc manpages-dev libstdc++-16-doc Recommended packages: manpages manpages-dev The following NEW packages will be installed: libasan8 libatomic1 libboost-atomic1.90-dev libboost-atomic1.90.0 libboost-filesystem1.90-dev libboost-filesystem1.90.0 libboost-iostreams1.90-dev libboost-iostreams1.90.0 libboost-random1.90-dev libboost-random1.90.0 libboost-regex1.90-dev libboost-regex1.90.0 libboost1.90-dev libc-dev-bin libc6-dev libgcc-16-dev libgenome-dev libgenome0 libgomp1 libhwasan0 libitm1 liblsan0 libmems-dev libmems1t64 libmuscle-dev libmuscle1 libquadmath0 libstdc++-16-dev libtsan2 libubsan1 linux-libc-dev 0 upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 36.0 MB of archives. After this operation, 302 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian forky/main amd64 libasan8 amd64 16.2.0-3 [2888 kB] Get:2 http://deb.debian.org/debian forky/main amd64 libatomic1 amd64 16.2.0-3 [10.4 kB] Get:3 http://deb.debian.org/debian forky/main amd64 libgomp1 amd64 16.2.0-3 [151 kB] Get:4 http://deb.debian.org/debian forky/main amd64 libitm1 amd64 16.2.0-3 [26.9 kB] Get:5 http://deb.debian.org/debian forky/main amd64 liblsan0 amd64 16.2.0-3 [1281 kB] Get:6 http://deb.debian.org/debian forky/main amd64 libtsan2 amd64 16.2.0-3 [2574 kB] Get:7 http://deb.debian.org/debian forky/main amd64 libubsan1 amd64 16.2.0-3 [1136 kB] Get:8 http://deb.debian.org/debian forky/main amd64 libhwasan0 amd64 16.2.0-3 [1580 kB] Get:9 http://deb.debian.org/debian forky/main amd64 libquadmath0 amd64 16.2.0-3 [148 kB] Get:10 http://deb.debian.org/debian forky/main amd64 libgcc-16-dev amd64 16.2.0-3 [2782 kB] Get:11 http://deb.debian.org/debian forky/main amd64 libc-dev-bin amd64 2.43-6 [39.5 kB] Get:12 http://deb.debian.org/debian forky/main amd64 linux-libc-dev all 7.2.8-1 [2002 kB] Get:13 http://deb.debian.org/debian forky/main amd64 libc6-dev amd64 2.43-6 [2070 kB] Get:14 http://deb.debian.org/debian forky/main amd64 libstdc++-16-dev amd64 16.2.0-3 [2755 kB] Get:15 http://deb.debian.org/debian forky/main amd64 libboost1.90-dev amd64 1.90.0-6.1+b1 [11.3 MB] Get:16 http://deb.debian.org/debian forky/main amd64 libboost-atomic1.90.0 amd64 1.90.0-6.1+b1 [227 kB] Get:17 http://deb.debian.org/debian forky/main amd64 libboost-atomic1.90-dev amd64 1.90.0-6.1+b1 [229 kB] Get:18 http://deb.debian.org/debian forky/main amd64 libboost-filesystem1.90.0 amd64 1.90.0-6.1+b1 [295 kB] Get:19 http://deb.debian.org/debian forky/main amd64 libboost-filesystem1.90-dev amd64 1.90.0-6.1+b1 [313 kB] Get:20 http://deb.debian.org/debian forky/main amd64 libboost-random1.90.0 amd64 1.90.0-6.1+b1 [236 kB] Get:21 http://deb.debian.org/debian forky/main amd64 libboost-random1.90-dev amd64 1.90.0-6.1+b1 [239 kB] Get:22 http://deb.debian.org/debian forky/main amd64 libboost-regex1.90.0 amd64 1.90.0-6.1+b1 [336 kB] Get:23 http://deb.debian.org/debian forky/main amd64 libboost-regex1.90-dev amd64 1.90.0-6.1+b1 [353 kB] Get:24 http://deb.debian.org/debian forky/main amd64 libboost-iostreams1.90.0 amd64 1.90.0-6.1+b1 [248 kB] Get:25 http://deb.debian.org/debian forky/main amd64 libboost-iostreams1.90-dev amd64 1.90.0-6.1+b1 [257 kB] Get:26 http://deb.debian.org/debian forky/main amd64 libgenome0 amd64 1.3.11+svn20110227.4616-6+b3 [126 kB] Get:27 http://deb.debian.org/debian forky/main amd64 libgenome-dev amd64 1.3.11+svn20110227.4616-6+b3 [192 kB] Get:28 http://deb.debian.org/debian forky/main amd64 libmuscle1 amd64 3.7+4565-8 [252 kB] Get:29 http://deb.debian.org/debian forky/main amd64 libmems1t64 amd64 1.6.0+4725-13+b1 [698 kB] Get:30 http://deb.debian.org/debian forky/main amd64 libmuscle-dev amd64 3.7+4565-8 [303 kB] Get:31 http://deb.debian.org/debian forky/main amd64 libmems-dev amd64 1.6.0+4725-13+b1 [977 kB] Fetched 36.0 MB in 0s (101 MB/s) Selecting previously unselected package libasan8:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4950 files and directories currently installed.) Preparing to unpack .../00-libasan8_16.2.0-3_amd64.deb ... Unpacking libasan8:amd64 (16.2.0-3) ... Selecting previously unselected package libatomic1:amd64. Preparing to unpack .../01-libatomic1_16.2.0-3_amd64.deb ... Unpacking libatomic1:amd64 (16.2.0-3) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../02-libgomp1_16.2.0-3_amd64.deb ... 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Preparing to unpack .../29-libmuscle-dev_3.7+4565-8_amd64.deb ... Unpacking libmuscle-dev (3.7+4565-8) ... Selecting previously unselected package libmems-dev. Preparing to unpack .../30-libmems-dev_1.6.0+4725-13+b1_amd64.deb ... Unpacking libmems-dev (1.6.0+4725-13+b1) ... Setting up libgenome0:amd64 (1.3.11+svn20110227.4616-6+b3) ... Setting up libgenome-dev:amd64 (1.3.11+svn20110227.4616-6+b3) ... Setting up linux-libc-dev (7.2.8-1) ... Setting up libgomp1:amd64 (16.2.0-3) ... Setting up libquadmath0:amd64 (16.2.0-3) ... Setting up libatomic1:amd64 (16.2.0-3) ... Setting up libubsan1:amd64 (16.2.0-3) ... Setting up libhwasan0:amd64 (16.2.0-3) ... Setting up libasan8:amd64 (16.2.0-3) ... Setting up libboost-atomic1.90.0:amd64 (1.90.0-6.1+b1) ... Setting up libboost-regex1.90.0:amd64 (1.90.0-6.1+b1) ... Setting up libboost-filesystem1.90.0:amd64 (1.90.0-6.1+b1) ... Setting up libtsan2:amd64 (16.2.0-3) ... Setting up libboost-random1.90.0:amd64 (1.90.0-6.1+b1) ... Setting up libc-dev-bin (2.43-6) ... Setting up libboost-iostreams1.90.0:amd64 (1.90.0-6.1+b1) ... Setting up liblsan0:amd64 (16.2.0-3) ... Setting up libitm1:amd64 (16.2.0-3) ... Setting up libmuscle1 (3.7+4565-8) ... Setting up libgcc-16-dev:amd64 (16.2.0-3) ... Setting up libmems1t64:amd64 (1.6.0+4725-13+b1) ... Setting up libmuscle-dev (3.7+4565-8) ... Setting up libc6-dev:amd64 (2.43-6) ... Setting up libstdc++-16-dev:amd64 (16.2.0-3) ... Setting up libboost1.90-dev:amd64 (1.90.0-6.1+b1) ... Setting up libboost-atomic1.90-dev:amd64 (1.90.0-6.1+b1) ... Setting up libboost-random1.90-dev:amd64 (1.90.0-6.1+b1) ... Setting up libboost-filesystem1.90-dev:amd64 (1.90.0-6.1+b1) ... Setting up libboost-regex1.90-dev:amd64 (1.90.0-6.1+b1) ... Setting up libboost-iostreams1.90-dev:amd64 (1.90.0-6.1+b1) ... Setting up libmems-dev (1.6.0+4725-13+b1) ... Processing triggers for libc-bin (2.43-6) ... 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-y', 'install', 'libmems-dev'] 0m12.4s INFO: Running scripts post_install 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_install_exceptions'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_install_exceptions'] 0m12.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m13.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m13.8s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpenqb9hr0 to sid 0m13.8s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m13.8s INFO: Running scripts pre_distupgrade 0m13.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m13.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m13.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m13.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_exceptions'] 0m13.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m13.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m13.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m13.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m13.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', 'update'] 0m17.8s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [193 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.8 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7731 kB] Fetched 18.7 MB in 3s (6032 kB/s) Reading package lists... 0m17.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', 'update'] 0m17.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-yf', 'dist-upgrade'] 0m25.1s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libboost-atomic1.90.0 libboost-filesystem1.90.0 libboost-iostreams1.90.0 libboost-random1.90.0 libboost-regex1.90.0 Use 'sudo apt autoremove' to remove them. The following packages will be REMOVED: libboost-atomic1.90-dev libboost-filesystem1.90-dev libboost-iostreams1.90-dev libboost-random1.90-dev libboost-regex1.90-dev libboost1.90-dev The following NEW packages will be installed: libboost-atomic1.92-dev libboost-atomic1.92.0 libboost-filesystem1.92-dev libboost-filesystem1.92.0 libboost-iostreams1.92-dev libboost-iostreams1.92.0 libboost-random1.92-dev libboost-random1.92.0 libboost-regex1.92-dev libboost-regex1.92.0 libboost1.92-dev libbz2-dev liblzma-dev libzstd-dev zlib1g-dev The following packages will be upgraded: findutils libaudit-common libaudit1 libc-bin libc-dev-bin libc-gconv-modules-extra libc6 libc6-dev libmems-dev libmems1t64 libpcre2-8-0 libssl3t64 linux-libc-dev login.defs openssl-provider-legacy passwd 16 upgraded, 15 newly installed, 6 to remove and 0 not upgraded. Need to get 31.3 MB of archives. After this operation, 19.5 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 findutils amd64 4.11.0-3 [788 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libc-dev-bin amd64 2.43-7 [39.7 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libc6-dev amd64 2.43-7 [2069 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libc-gconv-modules-extra amd64 2.43-7 [1103 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libc6 amd64 2.43-7 [1866 kB] Get:6 http://deb.debian.org/debian sid/main amd64 linux-libc-dev all 7.2.9-1 [2012 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libc-bin amd64 2.43-7 [621 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libboost-filesystem1.92.0 amd64 1.92.0-3 [293 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libboost-iostreams1.92.0 amd64 1.92.0-3 [248 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libmems-dev amd64 1.6.0+4725-13+b2 [1118 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libmems1t64 amd64 1.6.0+4725-13+b2 [782 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libboost-regex1.92.0 amd64 1.92.0-3 [320 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libboost-regex1.92-dev amd64 1.92.0-3 [339 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libboost1.92-dev amd64 1.92.0-3 [11.6 MB] Get:15 http://deb.debian.org/debian sid/main amd64 libboost-atomic1.92.0 amd64 1.92.0-3 [228 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libboost-atomic1.92-dev amd64 1.92.0-3 [231 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libboost-filesystem1.92-dev amd64 1.92.0-3 [312 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libboost-random1.92.0 amd64 1.92.0-3 [238 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libboost-random1.92-dev amd64 1.92.0-3 [241 kB] Get:20 http://deb.debian.org/debian sid/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.2-3 [918 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libbz2-dev amd64 1.0.8-6+b2 [33.6 kB] Get:22 http://deb.debian.org/debian sid/main amd64 liblzma-dev amd64 5.8.4-1 [391 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libzstd-dev amd64 1.5.7+dfsg-4 [371 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libboost-iostreams1.92-dev amd64 1.92.0-3 [257 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libaudit-common all 1:4.2.1-1 [13.3 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libaudit1 amd64 1:4.2.1-1 [59.6 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libpcre2-8-0 amd64 10.48-3.1 [312 kB] Get:28 http://deb.debian.org/debian sid/main amd64 openssl-provider-legacy amd64 3.6.5-1 [329 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libssl3t64 amd64 3.6.5-1 [2621 kB] Get:30 http://deb.debian.org/debian sid/main amd64 login.defs all 1:4.20.3-1 [224 kB] Get:31 http://deb.debian.org/debian sid/main amd64 passwd amd64 1:4.20.3-1 [1298 kB] Preconfiguring packages ... Fetched 31.3 MB in 1s (59.9 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27036 files and directories currently installed.) Preparing to unpack .../findutils_4.11.0-3_amd64.deb ... Unpacking findutils (4.11.0-3) over (4.11.0-2) ... Setting up findutils (4.11.0-3) ... (Reading database ... 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Setting up libc-gconv-modules-extra:amd64 (2.43-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27036 files and directories currently installed.) Preparing to unpack .../libc6_2.43-7_amd64.deb ... Unpacking libc6:amd64 (2.43-7) over (2.43-6) ... Setting up libc6:amd64 (2.43-7) ... (Reading database ... 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Unpacking libmems-dev (1.6.0+4725-13+b2) over (1.6.0+4725-13+b1) ... Preparing to unpack .../libmems1t64_1.6.0+4725-13+b2_amd64.deb ... Unpacking libmems1t64:amd64 (1.6.0+4725-13+b2) over (1.6.0+4725-13+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27044 files and directories currently installed.) Removing libboost-iostreams1.90-dev:amd64 (1.90.0-6.1+b1) ... Removing libboost-regex1.90-dev:amd64 (1.90.0-6.1+b1) ... Removing libboost-filesystem1.90-dev:amd64 (1.90.0-6.1+b1) ... Removing libboost-atomic1.90-dev:amd64 (1.90.0-6.1+b1) ... dpkg: libboost1.90-dev:amd64: dependency problems, but removing anyway as requested: libboost-random1.90-dev:amd64 depends on libboost1.90-dev (= 1.90.0-6.1+b1). Removing libboost1.90-dev:amd64 (1.90.0-6.1+b1) ... Selecting previously unselected package libboost-regex1.92.0:amd64. (Reading database ... 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Setting up libaudit-common (1:4.2.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27939 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a4.2.1-1_amd64.deb ... Unpacking libaudit1:amd64 (1:4.2.1-1) over (1:4.1.2-1+b2) ... Setting up libaudit1:amd64 (1:4.2.1-1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27938 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.6.5-1_amd64.deb ... Unpacking libssl3t64:amd64 (3.6.5-1) over (3.6.4-1) ... Setting up libssl3t64:amd64 (3.6.5-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27938 files and directories currently installed.) Preparing to unpack .../login.defs_1%3a4.20.3-1_all.deb ... Unpacking login.defs (1:4.20.3-1) over (1:4.20.2-2) ... Preparing to unpack .../passwd_1%3a4.20.3-1_amd64.deb ... Unpacking passwd (1:4.20.3-1) over (1:4.20.2-2) ... Setting up libboost-atomic1.92.0:amd64 (1.92.0-3) ... Setting up libzstd-dev:amd64 (1.5.7+dfsg-4) ... Setting up libboost-iostreams1.92.0:amd64 (1.92.0-3) ... Setting up login.defs (1:4.20.3-1) ... Setting up linux-libc-dev (7.2.9-1) ... Setting up libboost-regex1.92.0:amd64 (1.92.0-3) ... Setting up libboost-random1.92.0:amd64 (1.92.0-3) ... Setting up liblzma-dev:amd64 (5.8.4-1) ... Setting up passwd (1:4.20.3-1) ... Setting up libboost-filesystem1.92.0:amd64 (1.92.0-3) ... Setting up libc-dev-bin (2.43-7) ... Setting up libmems1t64:amd64 (1.6.0+4725-13+b2) ... Setting up libc6-dev:amd64 (2.43-7) ... Setting up libbz2-dev:amd64 (1.0.8-6+b2) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Setting up libboost-regex1.92-dev:amd64 (1.92.0-3) ... Setting up libboost1.92-dev:amd64 (1.92.0-3) ... Setting up libboost-random1.92-dev:amd64 (1.92.0-3) ... Setting up libboost-iostreams1.92-dev:amd64 (1.92.0-3) ... Setting up libboost-atomic1.92-dev:amd64 (1.92.0-3) ... Setting up libboost-filesystem1.92-dev:amd64 (1.92.0-3) ... Setting up libmems-dev (1.6.0+4725-13+b2) ... Processing triggers for libselinux1:amd64 (3.11-2.1) ... Processing triggers for libc-bin (2.43-7) ... 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-yf', 'dist-upgrade'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m25.5s DUMP: af815de184026a9e771305ca48702cc0 - 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'show', '--no-all-versions', 'libmems-dev'] 0m25.8s DUMP: Package: libmems-dev Source: libmems (1.6.0+4725-13) Version: 1.6.0+4725-13+b2 Installed-Size: 6858 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libmems-1.6-dev Depends: libmems1t64 (= 1.6.0+4725-13+b2), libboost-filesystem1.92-dev, libboost-iostreams1.92-dev, libgenome-dev, libmuscle-dev Description-en: development library to support DNA string matching and comparative genomics libMems is a freely available software development library to support DNA string matching and comparative genomics. Among other things, libMems implements an algorithm to perform approximate multi-MUM and multi-MEM identification. The algorithm uses spaced seed patterns in conjunction with a seed-and-extend style hashing method to identify matches. The method is efficient, requiring a maximum of only 16 bytes per base of the largest input sequence, and this data can be stored externally (i.e. on disk) to further reduce memory requirements. . This is the development package containing the statically linked library and the header files. Description-md5: d69753138606636bd9743d8705e86fd7 Homepage: http://sourceforge.net/p/mauve/code/HEAD/tree/libMems/trunk/ Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/libm/libmems/libmems-dev_1.6.0+4725-13+b2_amd64.deb Size: 1118292 MD5sum: f61a464ff1b5285079a6b1fc46c129d8 SHA256: 13ce48aabf1cada4b2976a93961e5e746fd62a0fb85f52820dfef663717b5967 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'show', '--no-all-versions', 'libmems-dev'] 0m25.8s INFO: apt-cache knows about the following packages: libmems-dev 0m25.8s INFO: Running scripts pre_install 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_database-server'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_database-server'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_exceptions'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_exceptions'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_extras'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_extras'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy'] 0m25.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m25.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy'] 0m25.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy', 'libmems-dev'] 0m25.9s DUMP: libmems-dev: Installed: 1.6.0+4725-13+b2 Candidate: 1.6.0+4725-13+b2 Version table: *** 1.6.0+4725-13+b2 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m25.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy', 'libmems-dev'] 0m25.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-y', 'install', 'libmems-dev'] 0m26.7s DUMP: Reading package lists... Building dependency tree... Reading state information... libmems-dev is already the newest version (1.6.0+4725-13+b2). Solving dependencies... The following packages were automatically installed and are no longer required: libboost-atomic1.90.0 libboost-filesystem1.90.0 libboost-iostreams1.90.0 libboost-random1.90.0 libboost-regex1.90.0 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-y', 'install', 'libmems-dev'] 0m26.7s INFO: Running scripts post_install 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_install_exceptions'] 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_install_exceptions'] 0m26.7s INFO: Running scripts post_distupgrade 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_exceptions'] 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_exceptions'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_zz_backports'] 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_distupgrade_zz_backports'] 0m26.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m28.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m28.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m29.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m29.7s INFO: Running scripts pre_install 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_database-server'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_database-server'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_exceptions'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_exceptions'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_extras'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_extras'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy'] 0m29.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy'] 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy', 'libmems-dev'] 0m29.8s DUMP: libmems-dev: Installed: 1.6.0+4725-13+b2 Candidate: 1.6.0+4725-13+b2 Version table: *** 1.6.0+4725-13+b2 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-cache', 'policy', 'libmems-dev'] 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-y', 'install', 'libmems-dev=1.6.0+4725-13+b2'] 0m30.8s DUMP: Reading package lists... Building dependency tree... Reading state information... libmems-dev is already the newest version (1.6.0+4725-13+b2). Solving dependencies... The following packages were automatically installed and are no longer required: libboost-atomic1.90.0 libboost-filesystem1.90.0 libboost-iostreams1.90.0 libboost-random1.90.0 libboost-regex1.90.0 Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m30.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', '-y', 'install', 'libmems-dev=1.6.0+4725-13+b2'] 0m30.8s INFO: Running scripts post_install 0m30.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_install_exceptions'] 0m30.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_install_exceptions'] 0m30.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m32.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m33.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', '-ac', '--ignore-obsolete'] 0m35.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', '-ac', '--ignore-obsolete'] 0m35.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.2s DUMP: 0.17.5+b5 0m35.2s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.2s INFO: Running adequate version 0.17.5+b5 now. 0m35.2s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'libmems-dev'] 0m35.2s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'libmems-dev'] 0m35.2s INFO: Running scripts pre_remove 0m35.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m35.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m35.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m35.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m35.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m36.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m36.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m36.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m36.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m36.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m36.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_exceptions'] 0m36.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/pre_remove_exceptions'] 0m36.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m36.6s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.11 install ok installed findutils findutils 4.11.0-3 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-3 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libasan8:amd64 libasan8 16.2.0-3 install ok installed libatomic1:amd64 libatomic1 16.2.0-3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.2.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.2.1-1 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libboost-atomic1.90.0:amd64 libboost-atomic1.90.0 1.90.0-6.1+b1 install ok installed libboost-atomic1.92-dev:amd64 libboost-atomic1.92-dev 1.92.0-3 install ok installed libboost-atomic1.92.0:amd64 libboost-atomic1.92.0 1.92.0-3 install ok installed libboost-filesystem1.90.0:amd64 libboost-filesystem1.90.0 1.90.0-6.1+b1 install ok installed libboost-filesystem1.92-dev:amd64 libboost-filesystem1.92-dev 1.92.0-3 install ok installed libboost-filesystem1.92.0:amd64 libboost-filesystem1.92.0 1.92.0-3 install ok installed libboost-iostreams1.90.0:amd64 libboost-iostreams1.90.0 1.90.0-6.1+b1 install ok installed libboost-iostreams1.92-dev:amd64 libboost-iostreams1.92-dev 1.92.0-3 install ok installed libboost-iostreams1.92.0:amd64 libboost-iostreams1.92.0 1.92.0-3 install ok installed libboost-random1.90.0:amd64 libboost-random1.90.0 1.90.0-6.1+b1 install ok installed libboost-random1.92-dev:amd64 libboost-random1.92-dev 1.92.0-3 install ok installed libboost-random1.92.0:amd64 libboost-random1.92.0 1.92.0-3 install ok installed libboost-regex1.90.0:amd64 libboost-regex1.90.0 1.90.0-6.1+b1 install ok installed libboost-regex1.92-dev:amd64 libboost-regex1.92-dev 1.92.0-3 install ok installed libboost-regex1.92.0:amd64 libboost-regex1.92.0 1.92.0-3 install ok installed libboost1.92-dev:amd64 libboost1.92-dev 1.92.0-3 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libbz2-dev:amd64 libbz2-dev 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-7 install ok installed libc-dev-bin libc-dev-bin 2.43-7 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-7 install ok installed libc6:amd64 libc6 2.43-7 install ok installed libc6-dev:amd64 libc6-dev 2.43-7 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libgcc-16-dev:amd64 libgcc-16-dev 16.2.0-3 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-3 install ok installed libgenome-dev:amd64 libgenome-dev 1.3.11+svn20110227.4616-6+b3 install ok installed libgenome0:amd64 libgenome0 1.3.11+svn20110227.4616-6+b3 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libgomp1:amd64 libgomp1 16.2.0-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed libhwasan0:amd64 libhwasan0 16.2.0-3 install ok installed libitm1:amd64 libitm1 16.2.0-3 install ok installed liblsan0:amd64 liblsan0 16.2.0-3 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma-dev:amd64 liblzma-dev 5.8.4-1 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmems-dev libmems-dev 1.6.0+4725-13+b2 install ok installed libmems1t64:amd64 libmems1t64 1.6.0+4725-13+b2 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libmuscle-dev libmuscle-dev 3.7+4565-8 install ok installed libmuscle1 libmuscle1 3.7+4565-8 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-3.1 install ok installed libquadmath0:amd64 libquadmath0 16.2.0-3 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b1 install ok installed libselinux1:amd64 libselinux1 3.11-2.1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b1 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libssl3t64:amd64 libssl3t64 3.6.5-1 install ok installed libstdc++-16-dev:amd64 libstdc++-16-dev 16.2.0-3 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 262-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libtsan2:amd64 libtsan2 16.2.0-3 install ok installed libubsan1:amd64 libubsan1 16.2.0-3 install ok installed libudev1:amd64 libudev1 262-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd-dev:amd64 libzstd-dev 1.5.7+dfsg-4 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed linux-libc-dev linux-libc-dev 7.2.9-1 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.3-1 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed mount mount 2.42.4-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.5-1 install ok installed passwd passwd 1:4.20.3-1 install ok installed perl-base perl-base 5.42.3-1 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-6 install ok installed tzdata tzdata 2026e-1 install ok installed util-linux util-linux 2.42.4-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.3.dfsg+really1.3.2-3 0m36.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m36.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', 'remove', '--allow-remove-essential', 'libasan8:amd64', 'libatomic1:amd64', 'libboost-atomic1.90.0:amd64', 'libboost-atomic1.92-dev:amd64', 'libboost-atomic1.92.0:amd64', 'libboost-filesystem1.90.0:amd64', 'libboost-filesystem1.92-dev:amd64', 'libboost-filesystem1.92.0:amd64', 'libboost-iostreams1.90.0:amd64', 'libboost-iostreams1.92-dev:amd64', 'libboost-iostreams1.92.0:amd64', 'libboost-random1.90.0:amd64', 'libboost-random1.92-dev:amd64', 'libboost-random1.92.0:amd64', 'libboost-regex1.90.0:amd64', 'libboost-regex1.92-dev:amd64', 'libboost-regex1.92.0:amd64', 'libboost1.92-dev:amd64', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libgcc-16-dev:amd64', 'libgenome-dev:amd64', 'libgenome0:amd64', 'libgomp1:amd64', 'libhwasan0:amd64', 'libitm1:amd64', 'liblsan0:amd64', 'liblzma-dev:amd64', 'libmems1t64:amd64', 'libmuscle-dev', 'libmuscle1', 'libquadmath0:amd64', 'libstdc++-16-dev:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libzstd-dev:amd64', 'linux-libc-dev', 'zlib1g-dev:amd64', 'libmems-dev'] 0m38.4s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: libasan8 libatomic1 libboost-atomic1.90.0 libboost-atomic1.92-dev libboost-atomic1.92.0 libboost-filesystem1.90.0 libboost-filesystem1.92-dev libboost-filesystem1.92.0 libboost-iostreams1.90.0 libboost-iostreams1.92-dev libboost-iostreams1.92.0 libboost-random1.90.0 libboost-random1.92-dev libboost-random1.92.0 libboost-regex1.90.0 libboost-regex1.92-dev libboost-regex1.92.0 libboost1.92-dev libbz2-dev libc-dev-bin libc6-dev libgcc-16-dev libgenome-dev libgenome0 libgomp1 libhwasan0 libitm1 liblsan0 liblzma-dev libmems-dev libmems1t64 libmuscle-dev libmuscle1 libquadmath0 libstdc++-16-dev libtsan2 libubsan1 libzstd-dev linux-libc-dev zlib1g-dev 0 upgraded, 0 newly installed, 40 to remove and 0 not upgraded. After this operation, 321 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 27938 files and directories currently installed.) Removing libmems-dev (1.6.0+4725-13+b2) ... Removing libboost-filesystem1.92-dev:amd64 (1.92.0-3) ... Removing libboost-atomic1.92-dev:amd64 (1.92.0-3) ... Removing libboost-iostreams1.92-dev:amd64 (1.92.0-3) ... Removing libboost-atomic1.90.0:amd64 (1.90.0-6.1+b1) ... Removing libboost-atomic1.92.0:amd64 (1.92.0-3) ... Removing libboost-filesystem1.90.0:amd64 (1.90.0-6.1+b1) ... Removing libmems1t64:amd64 (1.6.0+4725-13+b2) ... Removing libboost-filesystem1.92.0:amd64 (1.92.0-3) ... Removing libboost-iostreams1.90.0:amd64 (1.90.0-6.1+b1) ... Removing libboost-iostreams1.92.0:amd64 (1.92.0-3) ... Removing libboost-random1.90.0:amd64 (1.90.0-6.1+b1) ... Removing libboost-random1.92-dev:amd64 (1.92.0-3) ... Removing libboost-random1.92.0:amd64 (1.92.0-3) ... Removing libboost-regex1.90.0:amd64 (1.90.0-6.1+b1) ... Removing libbz2-dev:amd64 (1.0.8-6+b2) ... Removing zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.2-3) ... Removing libgenome-dev:amd64 (1.3.11+svn20110227.4616-6+b3) ... Removing libgenome0:amd64 (1.3.11+svn20110227.4616-6+b3) ... Removing libmuscle-dev (3.7+4565-8) ... Removing libmuscle1 (3.7+4565-8) ... Removing liblzma-dev:amd64 (5.8.4-1) ... Removing libzstd-dev:amd64 (1.5.7+dfsg-4) ... Removing libboost1.92-dev:amd64 (1.92.0-3) ... Removing libstdc++-16-dev:amd64 (16.2.0-3) ... Removing libgcc-16-dev:amd64 (16.2.0-3) ... Removing libasan8:amd64 (16.2.0-3) ... Removing libatomic1:amd64 (16.2.0-3) ... Removing libc6-dev:amd64 (2.43-7) ... Removing libc-dev-bin (2.43-7) ... Removing libgomp1:amd64 (16.2.0-3) ... Removing libhwasan0:amd64 (16.2.0-3) ... Removing libitm1:amd64 (16.2.0-3) ... Removing liblsan0:amd64 (16.2.0-3) ... Removing libquadmath0:amd64 (16.2.0-3) ... Removing libtsan2:amd64 (16.2.0-3) ... Removing libubsan1:amd64 (16.2.0-3) ... Removing linux-libc-dev (7.2.9-1) ... Removing libboost-regex1.92-dev:amd64 (1.92.0-3) ... Removing libboost-regex1.92.0:amd64 (1.92.0-3) ... Processing triggers for libc-bin (2.43-7) ... 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', 'remove', '--allow-remove-essential', 'libasan8:amd64', 'libatomic1:amd64', 'libboost-atomic1.90.0:amd64', 'libboost-atomic1.92-dev:amd64', 'libboost-atomic1.92.0:amd64', 'libboost-filesystem1.90.0:amd64', 'libboost-filesystem1.92-dev:amd64', 'libboost-filesystem1.92.0:amd64', 'libboost-iostreams1.90.0:amd64', 'libboost-iostreams1.92-dev:amd64', 'libboost-iostreams1.92.0:amd64', 'libboost-random1.90.0:amd64', 'libboost-random1.92-dev:amd64', 'libboost-random1.92.0:amd64', 'libboost-regex1.90.0:amd64', 'libboost-regex1.92-dev:amd64', 'libboost-regex1.92.0:amd64', 'libboost1.92-dev:amd64', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libgcc-16-dev:amd64', 'libgenome-dev:amd64', 'libgenome0:amd64', 'libgomp1:amd64', 'libhwasan0:amd64', 'libitm1:amd64', 'liblsan0:amd64', 'liblzma-dev:amd64', 'libmems1t64:amd64', 'libmuscle-dev', 'libmuscle1', 'libquadmath0:amd64', 'libstdc++-16-dev:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libzstd-dev:amd64', 'linux-libc-dev', 'zlib1g-dev:amd64', 'libmems-dev'] 0m38.4s INFO: Running scripts post_remove 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_remove_exceptions'] 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_remove_exceptions'] 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg', '--purge', 'libasan8:amd64', 'libatomic1:amd64', 'libboost-atomic1.90.0:amd64', 'libboost-atomic1.92-dev:amd64', 'libboost-atomic1.92.0:amd64', 'libboost-filesystem1.90.0:amd64', 'libboost-filesystem1.92-dev:amd64', 'libboost-filesystem1.92.0:amd64', 'libboost-iostreams1.90.0:amd64', 'libboost-iostreams1.92-dev:amd64', 'libboost-iostreams1.92.0:amd64', 'libboost-random1.90.0:amd64', 'libboost-random1.92-dev:amd64', 'libboost-random1.92.0:amd64', 'libboost-regex1.90.0:amd64', 'libboost-regex1.92-dev:amd64', 'libboost-regex1.92.0:amd64', 'libboost1.92-dev:amd64', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libgcc-16-dev:amd64', 'libgenome-dev:amd64', 'libgenome0:amd64', 'libgomp1:amd64', 'libhwasan0:amd64', 'libitm1:amd64', 'liblsan0:amd64', 'liblzma-dev:amd64', 'libmems1t64:amd64', 'libmuscle-dev', 'libmuscle1', 'libquadmath0:amd64', 'libstdc++-16-dev:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libzstd-dev:amd64', 'linux-libc-dev', 'zlib1g-dev:amd64'] 0m38.4s DUMP: dpkg: warning: ignoring request to remove libasan8 which is not installed dpkg: warning: ignoring request to remove libatomic1 which is not installed dpkg: warning: ignoring request to remove libboost-atomic1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-atomic1.92-dev which is not installed dpkg: warning: ignoring request to remove libboost-atomic1.92.0 which is not installed dpkg: warning: ignoring request to remove libboost-filesystem1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-filesystem1.92-dev which is not installed dpkg: warning: ignoring request to remove libboost-filesystem1.92.0 which is not installed dpkg: warning: ignoring request to remove libboost-iostreams1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-iostreams1.92-dev which is not installed dpkg: warning: ignoring request to remove libboost-iostreams1.92.0 which is not installed dpkg: warning: ignoring request to remove libboost-random1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-random1.92-dev which is not installed dpkg: warning: ignoring request to remove libboost-random1.92.0 which is not installed dpkg: warning: ignoring request to remove libboost-regex1.90.0 which is not installed dpkg: warning: ignoring request to remove libboost-regex1.92-dev which is not installed dpkg: warning: ignoring request to remove libboost-regex1.92.0 which is not installed dpkg: warning: ignoring request to remove libboost1.92-dev which is not installed dpkg: warning: ignoring request to remove libbz2-dev which is not installed dpkg: warning: ignoring request to remove libc-dev-bin which is not installed dpkg: warning: ignoring request to remove libc6-dev which is not installed dpkg: warning: ignoring request to remove libgcc-16-dev which is not installed dpkg: warning: ignoring request to remove libgenome-dev which is not installed dpkg: warning: ignoring request to remove libgenome0 which is not installed dpkg: warning: ignoring request to remove libgomp1 which is not installed dpkg: warning: ignoring request to remove libhwasan0 which is not installed dpkg: warning: ignoring request to remove libitm1 which is not installed dpkg: warning: ignoring request to remove liblsan0 which is not installed dpkg: warning: ignoring request to remove liblzma-dev which is not installed dpkg: warning: ignoring request to remove libmems1t64 which is not installed dpkg: warning: ignoring request to remove libmuscle-dev which is not installed dpkg: warning: ignoring request to remove libmuscle1 which is not installed dpkg: warning: ignoring request to remove libquadmath0 which is not installed dpkg: warning: ignoring request to remove libstdc++-16-dev which is not installed dpkg: warning: ignoring request to remove libtsan2 which is not installed dpkg: warning: ignoring request to remove libubsan1 which is not installed dpkg: warning: ignoring request to remove libzstd-dev which is not installed dpkg: warning: ignoring request to remove linux-libc-dev which is not installed dpkg: warning: ignoring request to remove zlib1g-dev which is not installed 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg', '--purge', 'libasan8:amd64', 'libatomic1:amd64', 'libboost-atomic1.90.0:amd64', 'libboost-atomic1.92-dev:amd64', 'libboost-atomic1.92.0:amd64', 'libboost-filesystem1.90.0:amd64', 'libboost-filesystem1.92-dev:amd64', 'libboost-filesystem1.92.0:amd64', 'libboost-iostreams1.90.0:amd64', 'libboost-iostreams1.92-dev:amd64', 'libboost-iostreams1.92.0:amd64', 'libboost-random1.90.0:amd64', 'libboost-random1.92-dev:amd64', 'libboost-random1.92.0:amd64', 'libboost-regex1.90.0:amd64', 'libboost-regex1.92-dev:amd64', 'libboost-regex1.92.0:amd64', 'libboost1.92-dev:amd64', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libgcc-16-dev:amd64', 'libgenome-dev:amd64', 'libgenome0:amd64', 'libgomp1:amd64', 'libhwasan0:amd64', 'libitm1:amd64', 'liblsan0:amd64', 'liblzma-dev:amd64', 'libmems1t64:amd64', 'libmuscle-dev', 'libmuscle1', 'libquadmath0:amd64', 'libstdc++-16-dev:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libzstd-dev:amd64', 'linux-libc-dev', 'zlib1g-dev:amd64'] 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg', '--purge', 'libmems-dev'] 0m38.4s DUMP: dpkg: warning: ignoring request to remove libmems-dev which is not installed 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg', '--purge', 'libmems-dev'] 0m38.4s INFO: Running scripts post_purge 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_purge_exceptions'] 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_purge_exceptions'] 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg', '--purge', '--pending'] 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg', '--purge', '--pending'] 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg', '--remove', '--pending'] 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg', '--remove', '--pending'] 0m38.4s INFO: Running scripts post_test 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_test_exceptions'] 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'tmp/scripts/post_test_exceptions'] 0m38.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m38.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m38.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg-divert', '--list'] 0m38.7s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m38.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'dpkg-divert', '--list'] 0m38.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', 'clean'] 0m38.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0', 'apt-get', 'clean'] 0m38.8s DEBUG: Recording chroot state 0m39.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/shm'] 0m39.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/shm'] 0m39.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/console'] 0m39.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/console'] 0m39.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/ptmx'] 0m39.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/ptmx'] 0m39.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/pts'] 0m39.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/dev/pts'] 0m39.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/proc'] 0m39.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0/proc'] 0m39.9s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m40.0s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpenqb9hr0'] 0m40.0s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpenqb9hr0 0m40.0s INFO: PASS: Upgrading between Debian distributions. 0m40.0s INFO: PASS: All tests. 0m40.0s INFO: piuparts run ends. ret=0 End: 2026-10-08 10:36:02 GMT