Start: 2024-12-05 16:50:39 GMT [testing] Package: libost-mol-mm-dev Source: openstructure Version: 2.9.0-1 Installed-Size: 148 Maintainer: Debichem Team Architecture: amd64 Depends: libost-mol-mm2.9 (= 2.9.0-1) Description: Open-Source Computational Structural Biology Framework Homepage: https://www.openstructure.org Description-md5: dca57137a22804cb104324183b5003cd Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/o/openstructure/libost-mol-mm-dev_2.9.0-1_amd64.deb Size: 29216 MD5sum: cadf99dae7cc09d063cb6aa2957e6002 SHA256: d5dfc6aec775a6f8660e5547bd76bbbbb31865b9b2cdc3aabe95cc3fe1b2f2c9 [sid] Package: libost-mol-mm-dev Source: openstructure Version: 2.9.0-2 Installed-Size: 148 Maintainer: Debichem Team Architecture: amd64 Depends: libost-mol-mm2.9 (= 2.9.0-2) Description: Open-Source Computational Structural Biology Framework Homepage: https://www.openstructure.org Description-md5: dca57137a22804cb104324183b5003cd Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/o/openstructure/libost-mol-mm-dev_2.9.0-2_amd64.deb Size: 29336 MD5sum: a3bc8f811155b4635a6b34dc9b006d96 SHA256: 192b0214f372a0479ba008eb3f6950ce43a393d495bc1c99dead203947076128 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libost-mol-mm-dev=2.9.0-2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libost-mol-mm-dev=2.9.0-2 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmplrrkefct 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmplrrkefct 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmplrrkefct', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmplrrkefct', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmplrrkefct/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmplrrkefct/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/pts'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/pts'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/ptmx'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/8', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/console'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/8', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/console'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/shm'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/shm'] 0m0.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.4s DEBUG: Created policy-rc.d and chmodded it. 0m0.4s DEBUG: Created resolv.conf. 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmplrrkefct/tmp/scripts/ 0m0.4s INFO: Running scripts post_chroot_unpack 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', 'update'] 0m2.8s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [172 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9342 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6272 kB] Fetched 15.8 MB in 1s (12.3 MB/s) Reading package lists... 0m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', 'update'] 0m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-yf', 'dist-upgrade'] 0m4.9s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: apt libapt-pkg6.0t64 libcap-ng0 libseccomp2 libsystemd0 libudev1 tzdata 7 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 3426 kB of archives. After this operation, 31.7 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 libsystemd0 amd64 257~rc3-1 [448 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libudev1 amd64 257~rc3-1 [147 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libapt-pkg6.0t64 amd64 2.9.16 [1113 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libseccomp2 amd64 2.5.5-2 [47.8 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 apt amd64 2.9.16 [1397 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 libcap-ng0 amd64 0.8.5-4 [17.3 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024b-4 [256 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3426 kB in 0s (43.4 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5150 files and directories currently installed.) Preparing to unpack .../libsystemd0_257~rc3-1_amd64.deb ... Unpacking libsystemd0:amd64 (257~rc3-1) over (257~rc2-3) ... Setting up libsystemd0:amd64 (257~rc3-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5150 files and directories currently installed.) Preparing to unpack .../libudev1_257~rc3-1_amd64.deb ... Unpacking libudev1:amd64 (257~rc3-1) over (257~rc2-3) ... Setting up libudev1:amd64 (257~rc3-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5150 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.16_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.16) over (2.9.14) ... Setting up libapt-pkg6.0t64:amd64 (2.9.16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5150 files and directories currently installed.) Preparing to unpack .../libseccomp2_2.5.5-2_amd64.deb ... Unpacking libseccomp2:amd64 (2.5.5-2) over (2.5.5-1+b3) ... Setting up libseccomp2:amd64 (2.5.5-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5149 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.16_amd64.deb ... Unpacking apt (2.9.16) over (2.9.14) ... Setting up apt (2.9.16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5149 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.8.5-4_amd64.deb ... Unpacking libcap-ng0:amd64 (0.8.5-4) over (0.8.5-3+b1) ... Setting up libcap-ng0:amd64 (0.8.5-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5148 files and directories currently installed.) Preparing to unpack .../tzdata_2024b-4_all.deb ... Unpacking tzdata (2024b-4) over (2024b-3) ... Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Dec 5 16:50:44 UTC 2024. Universal Time is now: Thu Dec 5 16:50:44 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Processing triggers for libc-bin (2.40-3) ... 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-yf', 'dist-upgrade'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s DUMP: f893dea1c7636dd00f7bfa3ac350398f - 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s INFO: Running scripts post_setup 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_dummy_users'] 0m9.6s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_dummy_users'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_forbid_home'] 0m9.7s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_forbid_home'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.7s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_minimize'] 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_minimize'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_zz_backports'] 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_setup_zz_backports'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.8s DUMP: install ok installed apt apt 2.9.16 install ok installed base-files base-files 13.6 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.32-1+b2 install ok installed bsdutils bsdutils 1:2.40.2-11 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.21 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1+b1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-8 install ok installed gpgv gpgv 2.2.45-2 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.16 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.2-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2 install ok installed libblkid1:amd64 libblkid1 2.40.2-11 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.273 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-8 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b2 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.8-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.2-11 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2+b1 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.44-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2 install ok installed libselinux1:amd64 libselinux1 3.7-3+b1 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2+b1 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-11 install ok installed libss2:amd64 libss2 1.47.1-1+b1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-8 install ok installed libsystemd0:amd64 libsystemd0 257~rc3-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libudev1:amd64 libudev1 257~rc3-1 install ok installed libunistring5:amd64 libunistring5 1.2-1+b1 install ok installed libuuid1:amd64 libuuid1 2.40.2-11 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed login login 1:4.16.0-2+really2.40.2-11 install ok installed login.defs login.defs 1:4.16.0-5 install ok installed logsave logsave 1.47.1-1+b1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-11 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed passwd passwd 1:4.16.0-5 install ok installed perl-base perl-base 5.40.0-8 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-11 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.8s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m9.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m10.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m10.2s INFO: Running scripts is_testable 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/is_testable_uninstallable'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/is_testable_uninstallable'] 0m10.2s INFO: Running scripts pre_test 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_test_exceptions'] 0m10.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_test_exceptions'] 0m10.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_test_root_password'] 0m10.3s DUMP: New password: Retype new password: passwd: password updated successfully 0m10.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_test_root_password'] 0m10.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'show', '--no-all-versions', 'libost-mol-mm-dev'] 0m10.7s DUMP: Package: libost-mol-mm-dev Source: openstructure Version: 2.9.0-1 Installed-Size: 148 Maintainer: Debichem Team Architecture: amd64 Depends: libost-mol-mm2.9 (= 2.9.0-1) Description-en: Open-Source Computational Structural Biology Framework OpenStructure aims to provide an open-source, modular, flexible, molecular modelling and visualization environment. It is targeted at interested method developers in the field of structural bioinformatics. Description-md5: dca57137a22804cb104324183b5003cd Homepage: https://www.openstructure.org Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/o/openstructure/libost-mol-mm-dev_2.9.0-1_amd64.deb Size: 29216 MD5sum: cadf99dae7cc09d063cb6aa2957e6002 SHA256: d5dfc6aec775a6f8660e5547bd76bbbbb31865b9b2cdc3aabe95cc3fe1b2f2c9 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'show', '--no-all-versions', 'libost-mol-mm-dev'] 0m10.7s INFO: apt-cache knows about the following packages: libost-mol-mm-dev 0m10.7s INFO: Running scripts pre_install 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_database-server'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_database-server'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_exceptions'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_exceptions'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_extras'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_extras'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy'] 0m10.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy', 'libost-mol-mm-dev'] 0m10.9s DUMP: libost-mol-mm-dev: Installed: (none) Candidate: 2.9.0-1 Version table: 2.9.0-1 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy', 'libost-mol-mm-dev'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-y', 'install', 'libost-mol-mm-dev'] 0m19.3s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libatomic1 libboost-filesystem1.83.0 libboost-iostreams1.83.0 libboost-thread1.83.0 libdeflate0 libdouble-conversion3 libfftw3-single3 libglib2.0-0t64 libgomp1 libicu72 libjbig0 libjpeg62-turbo liblerc4 libopenmm8.1 libost-base2.9 libost-conop2.9 libost-geom2.9 libost-img-alg2.9 libost-img2.9 libost-info2.9 libost-io2.9 libost-mol-alg2.9 libost-mol-mm2.9 libost-mol2.9 libost-seq2.9 libpcre2-16-0 libpng16-16t64 libqt5core5t64 libqt5xml5t64 libsharpyuv0 libsqlite3-0 libtiff6 libwebp7 libxml2 shared-mime-info Suggested packages: libfftw3-bin libfftw3-dev low-memory-monitor libthai0 Recommended packages: libglib2.0-data xdg-user-dirs qttranslations5-l10n The following NEW packages will be installed: libatomic1 libboost-filesystem1.83.0 libboost-iostreams1.83.0 libboost-thread1.83.0 libdeflate0 libdouble-conversion3 libfftw3-single3 libglib2.0-0t64 libgomp1 libicu72 libjbig0 libjpeg62-turbo liblerc4 libopenmm8.1 libost-base2.9 libost-conop2.9 libost-geom2.9 libost-img-alg2.9 libost-img2.9 libost-info2.9 libost-io2.9 libost-mol-alg2.9 libost-mol-mm-dev libost-mol-mm2.9 libost-mol2.9 libost-seq2.9 libpcre2-16-0 libpng16-16t64 libqt5core5t64 libqt5xml5t64 libsharpyuv0 libsqlite3-0 libtiff6 libwebp7 libxml2 shared-mime-info 0 upgraded, 36 newly installed, 0 to remove and 0 not upgraded. Need to get 22.7 MB of archives. After this operation, 85.8 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14.2.0-8 [9280 B] Get:2 http://deb.debian.org/debian trixie/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-3.2+b2 [282 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libboost-iostreams1.83.0 amd64 1.83.0-3.2+b2 [253 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libboost-thread1.83.0 amd64 1.83.0-3.2+b2 [269 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 libdouble-conversion3 amd64 3.3.0-1+b2 [41.8 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 libgomp1 amd64 14.2.0-8 [137 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libfftw3-single3 amd64 3.3.10-2+b1 [809 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1501 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libopenmm8.1 amd64 8.1.2+dfsg-1+b1 [1058 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 libost-base2.9 amd64 2.9.0-1 [34.4 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libost-geom2.9 amd64 2.9.0-1 [65.8 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libost-mol2.9 amd64 2.9.0-1 [394 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 libost-conop2.9 amd64 2.9.0-1 [189 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get:22 http://deb.debian.org/debian trixie/main amd64 libpcre2-16-0 amd64 10.44-4 [261 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 libqt5core5t64 amd64 5.15.15+dfsg-2 [1866 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 libqt5xml5t64 amd64 5.15.15+dfsg-2 [126 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 libost-info2.9 amd64 2.9.0-1 [167 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 libost-img2.9 amd64 2.9.0-1 [143 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 libost-img-alg2.9 amd64 2.9.0-1 [169 kB] Get:28 http://deb.debian.org/debian trixie/main amd64 libost-seq2.9 amd64 2.9.0-1 [90.4 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libost-mol-alg2.9 amd64 2.9.0-1 [371 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 libost-io2.9 amd64 2.9.0-1 [882 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 libost-mol-mm2.9 amd64 2.9.0-1 [298 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 libost-mol-mm-dev amd64 2.9.0-1 [29.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 22.7 MB in 0s (52.6 MB/s) Selecting previously unselected package libatomic1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5152 files and directories currently installed.) Preparing to unpack .../00-libatomic1_14.2.0-8_amd64.deb ... Unpacking libatomic1:amd64 (14.2.0-8) ... Selecting previously unselected package libboost-filesystem1.83.0:amd64. Preparing to unpack .../01-libboost-filesystem1.83.0_1.83.0-3.2+b2_amd64.deb ... Unpacking libboost-filesystem1.83.0:amd64 (1.83.0-3.2+b2) ... 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Setting up libdouble-conversion3:amd64 (3.3.0-1+b2) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up liblerc4:amd64 (4.0.0+ds-5) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up libdeflate0:amd64 (1.22-1) ... Setting up libboost-thread1.83.0:amd64 (1.83.0-3.2+b2) ... Setting up libboost-filesystem1.83.0:amd64 (1.83.0-3.2+b2) ... Setting up libgomp1:amd64 (14.2.0-8) ... Setting up libjbig0:amd64 (2.1-6.1+b2) ... Setting up libpcre2-16-0:amd64 (10.44-4) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ... Setting up libboost-iostreams1.83.0:amd64 (1.83.0-3.2+b2) ... Setting up libpng16-16t64:amd64 (1.6.44-2) ... Setting up libatomic1:amd64 (14.2.0-8) ... Setting up libwebp7:amd64 (1.4.0-0.1+b1) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up libost-base2.9:amd64 (2.9.0-1) ... Setting up libopenmm8.1 (8.1.2+dfsg-1+b1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libost-geom2.9:amd64 (2.9.0-1) ... Setting up libfftw3-single3:amd64 (3.3.10-2+b1) ... Setting up libglib2.0-0t64:amd64 (2.82.2-3) ... No schema files found: doing nothing. Setting up libost-mol2.9 (2.9.0-1) ... Setting up shared-mime-info (2.4-5+b1) ... Setting up libost-conop2.9 (2.9.0-1) ... Setting up libqt5core5t64:amd64 (5.15.15+dfsg-2) ... Setting up libqt5xml5t64:amd64 (5.15.15+dfsg-2) ... Setting up libost-info2.9 (2.9.0-1) ... Setting up libost-seq2.9 (2.9.0-1) ... Setting up libost-img2.9 (2.9.0-1) ... Setting up libost-img-alg2.9 (2.9.0-1) ... Setting up libost-mol-alg2.9 (2.9.0-1) ... Setting up libost-io2.9 (2.9.0-1) ... Setting up libost-mol-mm2.9 (2.9.0-1) ... Setting up libost-mol-mm-dev (2.9.0-1) ... Processing triggers for libc-bin (2.40-3) ... 0m19.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-y', 'install', 'libost-mol-mm-dev'] 0m19.3s INFO: Running scripts post_install 0m19.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_install_exceptions'] 0m19.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_install_exceptions'] 0m19.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m19.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m19.6s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmplrrkefct to sid 0m19.6s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m19.6s INFO: Running scripts pre_distupgrade 0m19.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_exceptions'] 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_exceptions'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', 'update'] 0m24.8s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [202 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.1 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7347 kB] Fetched 17.6 MB in 4s (4334 kB/s) Reading package lists... 0m24.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', 'update'] 0m24.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-yf', 'dist-upgrade'] 0m28.4s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: bash e2fsprogs libc-bin libc6 libcom-err2 libdebconfclient0 libext2fs2t64 libgmp10 libgpg-error0 libost-base2.9 libost-conop2.9 libost-geom2.9 libost-img-alg2.9 libost-img2.9 libost-info2.9 libost-io2.9 libost-mol-alg2.9 libost-mol-mm-dev libost-mol-mm2.9 libost-mol2.9 libost-seq2.9 libss2 libunistring5 logsave 24 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 9770 kB of archives. After this operation, 321 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bash amd64 5.2.37-1 [1501 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libc6 amd64 2.40-4 [2804 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libc-bin amd64 2.40-4 [626 kB] Get:4 http://deb.debian.org/debian sid/main amd64 logsave amd64 1.47.2~rc1-2 [23.6 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libext2fs2t64 amd64 1.47.2~rc1-2 [211 kB] Get:6 http://deb.debian.org/debian sid/main amd64 e2fsprogs amd64 1.47.2~rc1-2 [588 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libdebconfclient0 amd64 0.274 [10.1 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libgmp10 amd64 2:6.3.0+dfsg-3 [560 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libgpg-error0 amd64 1.51-2 [82.1 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libcom-err2 amd64 1.47.2~rc1-2 [23.8 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libost-base2.9 amd64 2.9.0-2 [34.5 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libost-geom2.9 amd64 2.9.0-2 [66.0 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libost-mol2.9 amd64 2.9.0-2 [394 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libost-conop2.9 amd64 2.9.0-2 [189 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libost-info2.9 amd64 2.9.0-2 [168 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libost-img2.9 amd64 2.9.0-2 [144 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libost-img-alg2.9 amd64 2.9.0-2 [169 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libost-seq2.9 amd64 2.9.0-2 [90.5 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libost-mol-alg2.9 amd64 2.9.0-2 [370 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libost-io2.9 amd64 2.9.0-2 [882 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libost-mol-mm-dev amd64 2.9.0-2 [29.3 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libost-mol-mm2.9 amd64 2.9.0-2 [299 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libss2 amd64 1.47.2~rc1-2 [28.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9770 kB in 0s (65.4 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5548 files and directories currently installed.) Preparing to unpack .../bash_5.2.37-1_amd64.deb ... Unpacking bash (5.2.37-1) over (5.2.32-1+b2) ... Setting up bash (5.2.37-1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5547 files and directories currently installed.) Preparing to unpack .../libc6_2.40-4_amd64.deb ... Unpacking libc6:amd64 (2.40-4) over (2.40-3) ... Setting up libc6:amd64 (2.40-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5547 files and directories currently installed.) Preparing to unpack .../libc-bin_2.40-4_amd64.deb ... Unpacking libc-bin (2.40-4) over (2.40-3) ... Setting up libc-bin (2.40-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5547 files and directories currently installed.) Preparing to unpack .../logsave_1.47.2~rc1-2_amd64.deb ... Unpacking logsave (1.47.2~rc1-2) over (1.47.1-1+b1) ... Preparing to unpack .../libext2fs2t64_1.47.2~rc1-2_amd64.deb ... Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.2~rc1-2) over (1.47.1-1+b1) ... Setting up libext2fs2t64:amd64 (1.47.2~rc1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5545 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.47.2~rc1-2_amd64.deb ... Unpacking e2fsprogs (1.47.2~rc1-2) over (1.47.1-1+b1) ... Preparing to unpack .../libdebconfclient0_0.274_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.274) over (0.273) ... Setting up libdebconfclient0:amd64 (0.274) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5543 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.51-2_amd64.deb ... Unpacking libgpg-error0:amd64 (1.51-2) over (1.50-4) ... Setting up libgpg-error0:amd64 (1.51-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5543 files and directories currently installed.) Preparing to unpack .../libunistring5_1.3-1_amd64.deb ... Unpacking libunistring5:amd64 (1.3-1) over (1.2-1+b1) ... Setting up libunistring5:amd64 (1.3-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5542 files and directories currently installed.) Preparing to unpack .../00-libcom-err2_1.47.2~rc1-2_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2~rc1-2) over (1.47.1-1+b1) ... Preparing to unpack .../01-libost-base2.9_2.9.0-2_amd64.deb ... Unpacking libost-base2.9:amd64 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../02-libost-geom2.9_2.9.0-2_amd64.deb ... Unpacking libost-geom2.9:amd64 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../03-libost-mol2.9_2.9.0-2_amd64.deb ... Unpacking libost-mol2.9 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../04-libost-conop2.9_2.9.0-2_amd64.deb ... Unpacking libost-conop2.9 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../05-libost-info2.9_2.9.0-2_amd64.deb ... Unpacking libost-info2.9 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../06-libost-img2.9_2.9.0-2_amd64.deb ... Unpacking libost-img2.9 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../07-libost-img-alg2.9_2.9.0-2_amd64.deb ... Unpacking libost-img-alg2.9 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../08-libost-seq2.9_2.9.0-2_amd64.deb ... Unpacking libost-seq2.9 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../09-libost-mol-alg2.9_2.9.0-2_amd64.deb ... Unpacking libost-mol-alg2.9 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../10-libost-io2.9_2.9.0-2_amd64.deb ... Unpacking libost-io2.9 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../11-libost-mol-mm-dev_2.9.0-2_amd64.deb ... Unpacking libost-mol-mm-dev (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../12-libost-mol-mm2.9_2.9.0-2_amd64.deb ... Unpacking libost-mol-mm2.9 (2.9.0-2) over (2.9.0-1) ... Preparing to unpack .../13-libss2_1.47.2~rc1-2_amd64.deb ... Unpacking libss2:amd64 (1.47.2~rc1-2) over (1.47.1-1+b1) ... Setting up libcom-err2:amd64 (1.47.2~rc1-2) ... Setting up libss2:amd64 (1.47.2~rc1-2) ... Setting up logsave (1.47.2~rc1-2) ... Setting up libost-base2.9:amd64 (2.9.0-2) ... Setting up libost-geom2.9:amd64 (2.9.0-2) ... Setting up libost-info2.9 (2.9.0-2) ... Setting up libost-img2.9 (2.9.0-2) ... Setting up e2fsprogs (1.47.2~rc1-2) ... Setting up libost-img-alg2.9 (2.9.0-2) ... Setting up libost-mol2.9 (2.9.0-2) ... Setting up libost-conop2.9 (2.9.0-2) ... Setting up libost-seq2.9 (2.9.0-2) ... Setting up libost-mol-alg2.9 (2.9.0-2) ... Setting up libost-io2.9 (2.9.0-2) ... Setting up libost-mol-mm2.9 (2.9.0-2) ... Setting up libost-mol-mm-dev (2.9.0-2) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for debianutils (5.21) ... 0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-yf', 'dist-upgrade'] 0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m29.4s DUMP: b0b74cc3b1c95a1eef3630e9f34246ff - 0m29.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m29.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'show', '--no-all-versions', 'libost-mol-mm-dev'] 0m29.6s DUMP: Package: libost-mol-mm-dev Source: openstructure Version: 2.9.0-2 Installed-Size: 148 Maintainer: Debichem Team Architecture: amd64 Depends: libost-mol-mm2.9 (= 2.9.0-2) Description-en: Open-Source Computational Structural Biology Framework OpenStructure aims to provide an open-source, modular, flexible, molecular modelling and visualization environment. It is targeted at interested method developers in the field of structural bioinformatics. Description-md5: dca57137a22804cb104324183b5003cd Homepage: https://www.openstructure.org Tag: devel::library, role::devel-lib Section: libdevel Priority: optional Filename: pool/main/o/openstructure/libost-mol-mm-dev_2.9.0-2_amd64.deb Size: 29336 MD5sum: a3bc8f811155b4635a6b34dc9b006d96 SHA256: 192b0214f372a0479ba008eb3f6950ce43a393d495bc1c99dead203947076128 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'show', '--no-all-versions', 'libost-mol-mm-dev'] 0m29.6s INFO: apt-cache knows about the following packages: libost-mol-mm-dev 0m29.6s INFO: Running scripts pre_install 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_database-server'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_database-server'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_exceptions'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_exceptions'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_extras'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_extras'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy'] 0m29.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy', 'libost-mol-mm-dev'] 0m29.7s DUMP: libost-mol-mm-dev: Installed: 2.9.0-2 Candidate: 2.9.0-2 Version table: *** 2.9.0-2 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy', 'libost-mol-mm-dev'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-y', 'install', 'libost-mol-mm-dev'] 0m30.3s DUMP: Reading package lists... Building dependency tree... Reading state information... libost-mol-mm-dev is already the newest version (2.9.0-2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-y', 'install', 'libost-mol-mm-dev'] 0m30.3s INFO: Running scripts post_install 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_install_exceptions'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_install_exceptions'] 0m30.3s INFO: Running scripts post_distupgrade 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_exceptions'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_exceptions'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_zz_backports'] 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_distupgrade_zz_backports'] 0m30.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m30.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m30.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m31.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m31.1s INFO: Running scripts pre_install 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_database-server'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_database-server'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_exceptions'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_exceptions'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_extras'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_extras'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy'] 0m31.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m31.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy'] 0m31.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy', 'libost-mol-mm-dev'] 0m31.2s DUMP: libost-mol-mm-dev: Installed: 2.9.0-2 Candidate: 2.9.0-2 Version table: *** 2.9.0-2 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m31.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-cache', 'policy', 'libost-mol-mm-dev'] 0m31.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-y', 'install', 'libost-mol-mm-dev=2.9.0-2'] 0m31.7s DUMP: Reading package lists... Building dependency tree... Reading state information... libost-mol-mm-dev is already the newest version (2.9.0-2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', '-y', 'install', 'libost-mol-mm-dev=2.9.0-2'] 0m31.7s INFO: Running scripts post_install 0m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_install_exceptions'] 0m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_install_exceptions'] 0m31.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m32.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m32.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmplrrkefct', '-ac', '--ignore-obsolete'] 0m33.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmplrrkefct', '-ac', '--ignore-obsolete'] 0m33.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m33.1s DUMP: 0.15.6 0m33.1s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m33.1s INFO: Running adequate version 0.15.6 now. 0m33.1s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'libost-mol-mm-dev'] 0m33.2s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'libost-mol-mm-dev'] 0m33.2s INFO: Running scripts pre_remove 0m33.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m33.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m33.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m33.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m33.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m34.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m34.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m34.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m34.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m34.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m34.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_exceptions'] 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/pre_remove_exceptions'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m34.6s DUMP: install ok installed apt apt 2.9.16 install ok installed base-files base-files 13.6 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.37-1 install ok installed bsdutils bsdutils 1:2.40.2-11 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.21 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.2~rc1-2 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-8 install ok installed gpgv gpgv 2.2.45-2 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.16 install ok installed libatomic1:amd64 libatomic1 14.2.0-8 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.2-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2 install ok installed libblkid1:amd64 libblkid1 2.40.2-11 install ok installed libboost-filesystem1.83.0:amd64 libboost-filesystem1.83.0 1.83.0-3.2+b2 install ok installed libboost-iostreams1.83.0:amd64 libboost-iostreams1.83.0 1.83.0-3.2+b2 install ok installed libboost-thread1.83.0:amd64 libboost-thread1.83.0 1.83.0-3.2+b2 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-4 install ok installed libc6:amd64 libc6 2.40-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.2~rc1-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.274 install ok installed libdeflate0:amd64 libdeflate0 1.22-1 install ok installed libdouble-conversion3:amd64 libdouble-conversion3 3.3.0-1+b2 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2~rc1-2 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libfftw3-single3:amd64 libfftw3-single3 3.3.10-2+b1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-8 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libglib2.0-0t64:amd64 libglib2.0-0t64 2.82.2-3 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.8-2 install ok installed libgomp1:amd64 libgomp1 14.2.0-8 install ok installed libgpg-error0:amd64 libgpg-error0 1.51-2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libicu72:amd64 libicu72 72.1-5+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed libjbig0:amd64 libjbig0 2.1-6.1+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-3+b1 install ok installed liblerc4:amd64 liblerc4 4.0.0+ds-5 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.2-11 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libopenmm8.1 libopenmm8.1 8.1.2+dfsg-1+b1 install ok installed libost-base2.9:amd64 libost-base2.9 2.9.0-2 install ok installed libost-conop2.9 libost-conop2.9 2.9.0-2 install ok installed libost-geom2.9:amd64 libost-geom2.9 2.9.0-2 install ok installed libost-img-alg2.9 libost-img-alg2.9 2.9.0-2 install ok installed libost-img2.9 libost-img2.9 2.9.0-2 install ok installed libost-info2.9 libost-info2.9 2.9.0-2 install ok installed libost-io2.9 libost-io2.9 2.9.0-2 install ok installed libost-mol-alg2.9 libost-mol-alg2.9 2.9.0-2 install ok installed libost-mol-mm-dev libost-mol-mm-dev 2.9.0-2 install ok installed libost-mol-mm2.9 libost-mol-mm2.9 2.9.0-2 install ok installed libost-mol2.9 libost-mol2.9 2.9.0-2 install ok installed libost-seq2.9 libost-seq2.9 2.9.0-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2+b1 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpcre2-16-0:amd64 libpcre2-16-0 10.44-4 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.44-4 install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.44-2 install ok installed libqt5core5t64:amd64 libqt5core5t64 5.15.15+dfsg-2 install ok installed libqt5xml5t64:amd64 libqt5xml5t64 5.15.15+dfsg-2 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2 install ok installed libselinux1:amd64 libselinux1 3.7-3+b1 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2+b1 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsharpyuv0:amd64 libsharpyuv0 1.4.0-0.1+b1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-11 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-1 install ok installed libss2:amd64 libss2 1.47.2~rc1-2 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-8 install ok installed libsystemd0:amd64 libsystemd0 257~rc3-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtiff6:amd64 libtiff6 4.5.1+git230720-5 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libudev1:amd64 libudev1 257~rc3-1 install ok installed libunistring5:amd64 libunistring5 1.3-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-11 install ok installed libwebp7:amd64 libwebp7 1.4.0-0.1+b1 install ok installed libxml2:amd64 libxml2 2.12.7+dfsg+really2.9.14-0.2+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed login login 1:4.16.0-2+really2.40.2-11 install ok installed login.defs login.defs 1:4.16.0-5 install ok installed logsave logsave 1.47.2~rc1-2 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-11 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed passwd passwd 1:4.16.0-5 install ok installed perl-base perl-base 5.40.0-8 install ok installed sed sed 4.9-2 install ok installed shared-mime-info shared-mime-info 2.4-5+b1 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-11 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m34.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m34.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', 'remove', 'libatomic1:amd64', 'libboost-filesystem1.83.0:amd64', 'libboost-iostreams1.83.0:amd64', 'libboost-thread1.83.0:amd64', 'libdeflate0:amd64', 'libdouble-conversion3:amd64', 'libfftw3-single3:amd64', 'libglib2.0-0t64:amd64', 'libgomp1:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'liblerc4:amd64', 'libopenmm8.1', 'libost-base2.9:amd64', 'libost-conop2.9', 'libost-geom2.9:amd64', 'libost-img-alg2.9', 'libost-img2.9', 'libost-info2.9', 'libost-io2.9', 'libost-mol-alg2.9', 'libost-mol-mm2.9', 'libost-mol2.9', 'libost-seq2.9', 'libpcre2-16-0:amd64', 'libpng16-16t64:amd64', 'libqt5core5t64:amd64', 'libqt5xml5t64:amd64', 'libsharpyuv0:amd64', 'libsqlite3-0:amd64', 'libtiff6:amd64', 'libwebp7:amd64', 'libxml2:amd64', 'shared-mime-info', 'libost-mol-mm-dev'] 0m35.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libatomic1 libboost-filesystem1.83.0 libboost-iostreams1.83.0 libboost-thread1.83.0 libdeflate0 libdouble-conversion3 libfftw3-single3 libglib2.0-0t64 libgomp1 libicu72 libjbig0 libjpeg62-turbo liblerc4 libopenmm8.1 libost-base2.9 libost-conop2.9 libost-geom2.9 libost-img-alg2.9 libost-img2.9 libost-info2.9 libost-io2.9 libost-mol-alg2.9 libost-mol-mm-dev libost-mol-mm2.9 libost-mol2.9 libost-seq2.9 libpcre2-16-0 libpng16-16t64 libqt5core5t64 libqt5xml5t64 libsharpyuv0 libsqlite3-0 libtiff6 libwebp7 libxml2 shared-mime-info 0 upgraded, 0 newly installed, 36 to remove and 0 not upgraded. After this operation, 85.8 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5540 files and directories currently installed.) Removing libost-mol-mm-dev (2.9.0-2) ... Removing libost-mol-mm2.9 (2.9.0-2) ... Removing libost-io2.9 (2.9.0-2) ... Removing libost-mol-alg2.9 (2.9.0-2) ... Removing libost-seq2.9 (2.9.0-2) ... Removing libost-img-alg2.9 (2.9.0-2) ... Removing libost-img2.9 (2.9.0-2) ... Removing libost-info2.9 (2.9.0-2) ... Removing libqt5xml5t64:amd64 (5.15.15+dfsg-2) ... Removing libqt5core5t64:amd64 (5.15.15+dfsg-2) ... Removing shared-mime-info (2.4-5+b1) ... Removing libglib2.0-0t64:amd64 (2.82.2-3) ... Removing libatomic1:amd64 (14.2.0-8) ... Removing libost-conop2.9 (2.9.0-2) ... Removing libost-mol2.9 (2.9.0-2) ... Removing libost-base2.9:amd64 (2.9.0-2) ... Removing libboost-filesystem1.83.0:amd64 (1.83.0-3.2+b2) ... Removing libboost-iostreams1.83.0:amd64 (1.83.0-3.2+b2) ... Removing libboost-thread1.83.0:amd64 (1.83.0-3.2+b2) ... Removing libtiff6:amd64 (4.5.1+git230720-5) ... Removing libdeflate0:amd64 (1.22-1) ... Removing libdouble-conversion3:amd64 (3.3.0-1+b2) ... Removing libfftw3-single3:amd64 (3.3.10-2+b1) ... Removing libgomp1:amd64 (14.2.0-8) ... Removing libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Removing libicu72:amd64 (72.1-5+b1) ... Removing libjbig0:amd64 (2.1-6.1+b2) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ... Removing liblerc4:amd64 (4.0.0+ds-5) ... Removing libopenmm8.1 (8.1.2+dfsg-1+b1) ... Removing libost-geom2.9:amd64 (2.9.0-2) ... Removing libpcre2-16-0:amd64 (10.44-4) ... Removing libpng16-16t64:amd64 (1.6.44-2) ... Removing libwebp7:amd64 (1.4.0-0.1+b1) ... Removing libsharpyuv0:amd64 (1.4.0-0.1+b1) ... Removing libsqlite3-0:amd64 (3.46.1-1) ... Processing triggers for libc-bin (2.40-4) ... 0m35.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', 'remove', 'libatomic1:amd64', 'libboost-filesystem1.83.0:amd64', 'libboost-iostreams1.83.0:amd64', 'libboost-thread1.83.0:amd64', 'libdeflate0:amd64', 'libdouble-conversion3:amd64', 'libfftw3-single3:amd64', 'libglib2.0-0t64:amd64', 'libgomp1:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'liblerc4:amd64', 'libopenmm8.1', 'libost-base2.9:amd64', 'libost-conop2.9', 'libost-geom2.9:amd64', 'libost-img-alg2.9', 'libost-img2.9', 'libost-info2.9', 'libost-io2.9', 'libost-mol-alg2.9', 'libost-mol-mm2.9', 'libost-mol2.9', 'libost-seq2.9', 'libpcre2-16-0:amd64', 'libpng16-16t64:amd64', 'libqt5core5t64:amd64', 'libqt5xml5t64:amd64', 'libsharpyuv0:amd64', 'libsqlite3-0:amd64', 'libtiff6:amd64', 'libwebp7:amd64', 'libxml2:amd64', 'shared-mime-info', 'libost-mol-mm-dev'] 0m35.8s INFO: Running scripts post_remove 0m35.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_remove_exceptions'] 0m35.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_remove_exceptions'] 0m35.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg', '--purge', 'libatomic1:amd64', 'libboost-filesystem1.83.0:amd64', 'libboost-iostreams1.83.0:amd64', 'libboost-thread1.83.0:amd64', 'libdeflate0:amd64', 'libdouble-conversion3:amd64', 'libfftw3-single3:amd64', 'libglib2.0-0t64:amd64', 'libgomp1:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'liblerc4:amd64', 'libopenmm8.1', 'libost-base2.9:amd64', 'libost-conop2.9', 'libost-geom2.9:amd64', 'libost-img-alg2.9', 'libost-img2.9', 'libost-info2.9', 'libost-io2.9', 'libost-mol-alg2.9', 'libost-mol-mm2.9', 'libost-mol2.9', 'libost-seq2.9', 'libpcre2-16-0:amd64', 'libpng16-16t64:amd64', 'libqt5core5t64:amd64', 'libqt5xml5t64:amd64', 'libsharpyuv0:amd64', 'libsqlite3-0:amd64', 'libtiff6:amd64', 'libwebp7:amd64', 'libxml2:amd64', 'shared-mime-info'] 0m35.9s DUMP: dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libboost-filesystem1.83.0 which isn't installed dpkg: warning: ignoring request to remove libboost-iostreams1.83.0 which isn't installed dpkg: warning: ignoring request to remove libboost-thread1.83.0 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libdouble-conversion3 which isn't installed dpkg: warning: ignoring request to remove libfftw3-single3 which isn't installed (Reading database ... 5145 files and directories currently installed.) Purging configuration files for libglib2.0-0t64:amd64 (2.82.2-3) ... dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove liblerc4 which isn't installed dpkg: warning: ignoring request to remove libopenmm8.1 which isn't installed dpkg: warning: ignoring request to remove libost-base2.9 which isn't installed dpkg: warning: ignoring request to remove libost-conop2.9 which isn't installed dpkg: warning: ignoring request to remove libost-geom2.9 which isn't installed dpkg: warning: ignoring request to remove libost-img-alg2.9 which isn't installed dpkg: warning: ignoring request to remove libost-img2.9 which isn't installed dpkg: warning: ignoring request to remove libost-info2.9 which isn't installed dpkg: warning: ignoring request to remove libost-io2.9 which isn't installed dpkg: warning: ignoring request to remove libost-mol-alg2.9 which isn't installed dpkg: warning: ignoring request to remove libost-mol-mm2.9 which isn't installed dpkg: warning: ignoring request to remove libost-mol2.9 which isn't installed dpkg: warning: ignoring request to remove libost-seq2.9 which isn't installed dpkg: warning: ignoring request to remove libpcre2-16-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16t64 which isn't installed dpkg: warning: ignoring request to remove libqt5core5t64 which isn't installed dpkg: warning: ignoring request to remove libqt5xml5t64 which isn't installed dpkg: warning: ignoring request to remove libsharpyuv0 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libtiff6 which isn't installed dpkg: warning: ignoring request to remove libwebp7 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed Purging configuration files for shared-mime-info (2.4-5+b1) ... 0m35.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg', '--purge', 'libatomic1:amd64', 'libboost-filesystem1.83.0:amd64', 'libboost-iostreams1.83.0:amd64', 'libboost-thread1.83.0:amd64', 'libdeflate0:amd64', 'libdouble-conversion3:amd64', 'libfftw3-single3:amd64', 'libglib2.0-0t64:amd64', 'libgomp1:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'liblerc4:amd64', 'libopenmm8.1', 'libost-base2.9:amd64', 'libost-conop2.9', 'libost-geom2.9:amd64', 'libost-img-alg2.9', 'libost-img2.9', 'libost-info2.9', 'libost-io2.9', 'libost-mol-alg2.9', 'libost-mol-mm2.9', 'libost-mol2.9', 'libost-seq2.9', 'libpcre2-16-0:amd64', 'libpng16-16t64:amd64', 'libqt5core5t64:amd64', 'libqt5xml5t64:amd64', 'libsharpyuv0:amd64', 'libsqlite3-0:amd64', 'libtiff6:amd64', 'libwebp7:amd64', 'libxml2:amd64', 'shared-mime-info'] 0m35.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg', '--purge', 'libost-mol-mm-dev'] 0m35.9s DUMP: dpkg: warning: ignoring request to remove libost-mol-mm-dev which isn't installed 0m35.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg', '--purge', 'libost-mol-mm-dev'] 0m35.9s INFO: Running scripts post_purge 0m35.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_purge_exceptions'] 0m35.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_purge_exceptions'] 0m35.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg', '--purge', '--pending'] 0m35.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg', '--purge', '--pending'] 0m35.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg', '--remove', '--pending'] 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg', '--remove', '--pending'] 0m36.0s INFO: Running scripts post_test 0m36.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_test_exceptions'] 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'tmp/scripts/post_test_exceptions'] 0m36.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m36.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m36.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg-divert', '--list'] 0m36.3s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m36.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'dpkg-divert', '--list'] 0m36.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', 'clean'] 0m36.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmplrrkefct', 'apt-get', 'clean'] 0m36.4s DEBUG: Recording chroot state 0m37.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/shm'] 0m37.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/shm'] 0m37.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/console'] 0m37.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/console'] 0m37.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/ptmx'] 0m37.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/ptmx'] 0m37.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/pts'] 0m37.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/dev/pts'] 0m37.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/proc'] 0m37.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmplrrkefct/proc'] 0m37.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m37.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmplrrkefct'] 0m37.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmplrrkefct 0m37.6s INFO: PASS: Upgrading between Debian distributions. 0m37.6s INFO: PASS: All tests. 0m37.6s INFO: piuparts run ends. ret=0 End: 2024-12-05 16:51:17 GMT