Start: 2024-10-15 23:06:01 GMT [testing] Package: libsbml5-cil Source: libsbml Version: 5.20.2+dfsg-8 Installed-Size: 12897 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libsbml-cil Depends: libbz2-1.0, libc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1), libxml2 (>= 2.7.4), zlib1g (>= 1:1.1.4), libmono-corlib4.5-cil (>= 5.18.0.240), libsbml5-dev Description: System Biology Markup Language library - CLI bindings Homepage: http://www.sbml.org/ Description-md5: 6923ba76f814ada93ced1087327fce79 Section: cli-mono Priority: optional Filename: pool/main/libs/libsbml/libsbml5-cil_5.20.2+dfsg-8_amd64.deb Size: 2625792 MD5sum: b17985d407688cfd4ee184d46f5d8426 SHA256: dba8665ff7725d88e01c914579fc09b15f9959c8db473ab605e68dacd87c67ae [sid] Package: libsbml5-cil Source: libsbml (5.20.2+dfsg-8) Version: 5.20.2+dfsg-8+b1 Installed-Size: 13174 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libsbml-cil Depends: libbz2-1.0, libc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1), libxml2 (>= 2.7.4), zlib1g (>= 1:1.1.4), libmono-corlib4.5-cil (>= 5.18.0.240), libsbml5-dev Description: System Biology Markup Language library - CLI bindings Homepage: http://www.sbml.org/ Description-md5: 6923ba76f814ada93ced1087327fce79 Section: cli-mono Priority: optional Filename: pool/main/libs/libsbml/libsbml5-cil_5.20.2+dfsg-8+b1_amd64.deb Size: 2673664 MD5sum: 0d9ebe1559821aba9b1e27109830d617 SHA256: b7f97f0110a38ad478b698fd7f1664e8983fe55699d75974d12345090a5a7aba Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libsbml5-cil=5.20.2+dfsg-8+b1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libsbml5-cil=5.20.2+dfsg-8+b1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpj6hi43sg 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpj6hi43sg 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/pts'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/pts'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpj6hi43sg/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', 'update'] 0m3.7s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [169 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9313 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6223 kB] Fetched 15.7 MB in 2s (7561 kB/s) Reading package lists... 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', 'update'] 0m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-yf', 'dist-upgrade'] 0m6.0s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: bsdutils gcc-14-base libblkid1 libgcc-s1 libmount1 libsmartcols1 libstdc++6 libsystemd0 libudev1 libuuid1 login mount util-linux 13 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 3459 kB of archives. After this operation, 8192 B of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.2-9 [105 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.2-9 [35.6 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.2-9 [168 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.2-9 [199 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.2-9 [139 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.2-9 [1216 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.2-9 [154 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.2-9 [81.4 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 gcc-14-base amd64 14.2.0-6 [46.7 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libstdc++6 amd64 14.2.0-6 [715 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libgcc-s1 amd64 14.2.0-6 [72.8 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libsystemd0 amd64 256.7-1 [382 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 libudev1 amd64 256.7-1 [145 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3459 kB in 0s (42.9 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.2-9_amd64.deb ... Unpacking bsdutils (1:2.40.2-9) over (1:2.40.2-8) ... Setting up bsdutils (1:2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libuuid1_2.40.2-9_amd64.deb ... Unpacking libuuid1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libuuid1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libblkid1_2.40.2-9_amd64.deb ... Unpacking libblkid1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libblkid1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.2-9_amd64.deb ... Unpacking libmount1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libmount1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.2-9_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libsmartcols1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.2-9_amd64.deb ... Unpacking util-linux (2.40.2-9) over (2.40.2-8) ... Setting up util-linux (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../mount_2.40.2-9_amd64.deb ... Unpacking mount (2.40.2-9) over (2.40.2-8) ... Preparing to unpack .../login_1%3a4.16.0-2+really2.40.2-9_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.2-9) over (1:4.16.0-2+really2.40.2-8) ... Preparing to unpack .../gcc-14-base_14.2.0-6_amd64.deb ... Unpacking gcc-14-base:amd64 (14.2.0-6) over (14.2.0-3) ... Setting up gcc-14-base:amd64 (14.2.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libstdc++6_14.2.0-6_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-6) over (14.2.0-3) ... Setting up libstdc++6:amd64 (14.2.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14.2.0-6_amd64.deb ... Unpacking libgcc-s1:amd64 (14.2.0-6) over (14.2.0-3) ... Setting up libgcc-s1:amd64 (14.2.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libsystemd0_256.7-1_amd64.deb ... Unpacking libsystemd0:amd64 (256.7-1) over (256.6-1) ... Setting up libsystemd0:amd64 (256.7-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libudev1_256.7-1_amd64.deb ... Unpacking libudev1:amd64 (256.7-1) over (256.6-1) ... Setting up libudev1:amd64 (256.7-1) ... Setting up mount (2.40.2-9) ... Setting up login (1:4.16.0-2+really2.40.2-9) ... Processing triggers for libc-bin (2.40-3) ... 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-yf', 'dist-upgrade'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s DUMP: 5ea7e41b4c4cb5d8e953be9879b22316 - 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s INFO: Running scripts post_setup 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_dummy_users'] 0m7.4s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_dummy_users'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_forbid_home'] 0m7.4s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_forbid_home'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.4s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_minimize'] 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_minimize'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_zz_backports'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_setup_zz_backports'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.5s DUMP: install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-6 install ok installed gpgv gpgv 2.2.43-8+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-6 install ok installed libsystemd0:amd64 libsystemd0 256.7-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.7-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.5s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m7.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m7.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m7.9s INFO: Running scripts is_testable 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/is_testable_uninstallable'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/is_testable_uninstallable'] 0m7.9s INFO: Running scripts pre_test 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_test_exceptions'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_test_exceptions'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_test_root_password'] 0m8.0s DUMP: New password: Retype new password: passwd: password updated successfully 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_test_root_password'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'show', '--no-all-versions', 'libsbml5-cil'] 0m8.2s DUMP: Package: libsbml5-cil Source: libsbml Version: 5.20.2+dfsg-8 Installed-Size: 12897 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libsbml-cil Depends: libbz2-1.0, libc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1), libxml2 (>= 2.7.4), zlib1g (>= 1:1.1.4), libmono-corlib4.5-cil (>= 5.18.0.240), libsbml5-dev Description-en: System Biology Markup Language library - CLI bindings LibSBML is a library designed to help you read, write, manipulate, translate, and validate SBML files and data streams. It is not an application itself (though it does come with many example programs), but rather a library you can embed in your own applications. . This package contains the CLI bindings of LibSBML. Description-md5: 6923ba76f814ada93ced1087327fce79 Homepage: http://www.sbml.org/ Section: cli-mono Priority: optional Filename: pool/main/libs/libsbml/libsbml5-cil_5.20.2+dfsg-8_amd64.deb Size: 2625792 MD5sum: b17985d407688cfd4ee184d46f5d8426 SHA256: dba8665ff7725d88e01c914579fc09b15f9959c8db473ab605e68dacd87c67ae 0m8.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'show', '--no-all-versions', 'libsbml5-cil'] 0m8.2s INFO: apt-cache knows about the following packages: libsbml5-cil 0m8.2s INFO: Running scripts pre_install 0m8.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_database-server'] 0m8.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_database-server'] 0m8.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_exceptions'] 0m8.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_exceptions'] 0m8.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_extras'] 0m8.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_extras'] 0m8.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy'] 0m8.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy', 'libsbml5-cil'] 0m8.3s DUMP: libsbml5-cil: Installed: (none) Candidate: 5.20.2+dfsg-8 Version table: 5.20.2+dfsg-8 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy', 'libsbml5-cil'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-y', 'install', 'libsbml5-cil'] 0m20.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu libbinutils libctf-nobfd0 libctf0 libgprofng0 libgssapi-krb5-2 libicu72 libjansson4 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libmono-corlib4.5-cil libmono-corlib4.5-dll libmono-security4.0-cil libmono-system-configuration4.0-cil libmono-system-core4.0-cil libmono-system-numerics4.0-cil libmono-system-security4.0-cil libmono-system-xml4.0-cil libmono-system4.0-cil libsbml5-dev libsbml5t64 libsframe1 libxml2 mono-4.0-gac mono-gac mono-runtime mono-runtime-common mono-runtime-sgen Suggested packages: binutils-doc gprofng-gui krb5-doc krb5-user libmono-i18n4.0-all libasound2 libgamin0 xdg-utils | libgnome2-0 | konqueror Recommended packages: krb5-locales libmono-i18n-west4.0-cil ca-certificates-mono libmono-btls-interface4.0-cil cli-common binfmt-support The following NEW packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu libbinutils libctf-nobfd0 libctf0 libgprofng0 libgssapi-krb5-2 libicu72 libjansson4 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libmono-corlib4.5-cil libmono-corlib4.5-dll libmono-security4.0-cil libmono-system-configuration4.0-cil libmono-system-core4.0-cil libmono-system-numerics4.0-cil libmono-system-security4.0-cil libmono-system-xml4.0-cil libmono-system4.0-cil libsbml5-cil libsbml5-dev libsbml5t64 libsframe1 libxml2 mono-4.0-gac mono-gac mono-runtime mono-runtime-common mono-runtime-sgen 0 upgraded, 33 newly installed, 0 to remove and 0 not upgraded. Need to get 31.8 MB of archives. After this operation, 157 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:4 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 binutils-common amd64 2.43.1-5 [2631 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 libsframe1 amd64 2.43.1-5 [77.1 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libbinutils amd64 2.43.1-5 [529 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libctf-nobfd0 amd64 2.43.1-5 [154 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libctf0 amd64 2.43.1-5 [88.4 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libgprofng0 amd64 2.43.1-5 [797 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libjansson4 amd64 2.14-2+b2 [39.9 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 binutils-x86-64-linux-gnu amd64 2.43.1-5 [2257 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 binutils amd64 2.43.1-5 [67.8 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 mono-runtime-common amd64 6.12.0.199+dfsg-1 [1185 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libmono-corlib4.5-dll all 6.12.0.199+dfsg-1 [1254 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libmono-system-core4.0-cil all 6.12.0.199+dfsg-1 [305 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 libmono-system-numerics4.0-cil all 6.12.0.199+dfsg-1 [51.7 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 libmono-system-xml4.0-cil all 6.12.0.199+dfsg-1 [818 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 libmono-system-security4.0-cil all 6.12.0.199+dfsg-1 [117 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 libmono-system-configuration4.0-cil all 6.12.0.199+dfsg-1 [57.8 kB] Get:22 http://deb.debian.org/debian trixie/main amd64 libmono-system4.0-cil all 6.12.0.199+dfsg-1 [806 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 libmono-security4.0-cil all 6.12.0.199+dfsg-1 [98.2 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 mono-4.0-gac all 6.12.0.199+dfsg-1 [156 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 mono-gac all 6.12.0.199+dfsg-1 [21.7 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 mono-runtime-sgen amd64 6.12.0.199+dfsg-1 [1684 kB] Get:28 http://deb.debian.org/debian trixie/main amd64 mono-runtime amd64 6.12.0.199+dfsg-1 [17.6 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libmono-corlib4.5-cil all 6.12.0.199+dfsg-1 [15.8 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libsbml5t64 amd64 5.20.2+dfsg-8 [2108 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 libsbml5-dev amd64 5.20.2+dfsg-8 [3145 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libsbml5-cil amd64 5.20.2+dfsg-8 [2626 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 31.8 MB in 0s (75.9 MB/s) Selecting previously unselected package libkrb5support0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5145 files and directories currently installed.) Preparing to unpack .../00-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../01-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../02-libkeyutils1_1.6.3-3_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../03-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../04-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package binutils-common:amd64. Preparing to unpack .../05-binutils-common_2.43.1-5_amd64.deb ... Unpacking binutils-common:amd64 (2.43.1-5) ... Selecting previously unselected package libsframe1:amd64. Preparing to unpack .../06-libsframe1_2.43.1-5_amd64.deb ... Unpacking libsframe1:amd64 (2.43.1-5) ... Selecting previously unselected package libbinutils:amd64. Preparing to unpack .../07-libbinutils_2.43.1-5_amd64.deb ... Unpacking libbinutils:amd64 (2.43.1-5) ... Selecting previously unselected package libctf-nobfd0:amd64. Preparing to unpack .../08-libctf-nobfd0_2.43.1-5_amd64.deb ... Unpacking libctf-nobfd0:amd64 (2.43.1-5) ... Selecting previously unselected package libctf0:amd64. Preparing to unpack .../09-libctf0_2.43.1-5_amd64.deb ... Unpacking libctf0:amd64 (2.43.1-5) ... Selecting previously unselected package libgprofng0:amd64. Preparing to unpack .../10-libgprofng0_2.43.1-5_amd64.deb ... Unpacking libgprofng0:amd64 (2.43.1-5) ... Selecting previously unselected package libjansson4:amd64. Preparing to unpack .../11-libjansson4_2.14-2+b2_amd64.deb ... Unpacking libjansson4:amd64 (2.14-2+b2) ... Selecting previously unselected package binutils-x86-64-linux-gnu. Preparing to unpack .../12-binutils-x86-64-linux-gnu_2.43.1-5_amd64.deb ... Unpacking binutils-x86-64-linux-gnu (2.43.1-5) ... Selecting previously unselected package binutils. Preparing to unpack .../13-binutils_2.43.1-5_amd64.deb ... Unpacking binutils (2.43.1-5) ... Selecting previously unselected package mono-runtime-common. Preparing to unpack .../14-mono-runtime-common_6.12.0.199+dfsg-1_amd64.deb ... Unpacking mono-runtime-common (6.12.0.199+dfsg-1) ... Selecting previously unselected package libmono-corlib4.5-dll. Preparing to unpack .../15-libmono-corlib4.5-dll_6.12.0.199+dfsg-1_all.deb ... Unpacking libmono-corlib4.5-dll (6.12.0.199+dfsg-1) ... Selecting previously unselected package libmono-system-core4.0-cil. Preparing to unpack .../16-libmono-system-core4.0-cil_6.12.0.199+dfsg-1_all.deb ... Unpacking libmono-system-core4.0-cil (6.12.0.199+dfsg-1) ... Selecting previously unselected package libmono-system-numerics4.0-cil. Preparing to unpack .../17-libmono-system-numerics4.0-cil_6.12.0.199+dfsg-1_all.deb ... Unpacking libmono-system-numerics4.0-cil (6.12.0.199+dfsg-1) ... Selecting previously unselected package libmono-system-xml4.0-cil. Preparing to unpack .../18-libmono-system-xml4.0-cil_6.12.0.199+dfsg-1_all.deb ... Unpacking libmono-system-xml4.0-cil (6.12.0.199+dfsg-1) ... Selecting previously unselected package libmono-system-security4.0-cil. Preparing to unpack .../19-libmono-system-security4.0-cil_6.12.0.199+dfsg-1_all.deb ... Unpacking libmono-system-security4.0-cil (6.12.0.199+dfsg-1) ... Selecting previously unselected package libmono-system-configuration4.0-cil. Preparing to unpack .../20-libmono-system-configuration4.0-cil_6.12.0.199+dfsg-1_all.deb ... Unpacking libmono-system-configuration4.0-cil (6.12.0.199+dfsg-1) ... Selecting previously unselected package libmono-system4.0-cil. Preparing to unpack .../21-libmono-system4.0-cil_6.12.0.199+dfsg-1_all.deb ... Unpacking libmono-system4.0-cil (6.12.0.199+dfsg-1) ... Selecting previously unselected package libmono-security4.0-cil. Preparing to unpack .../22-libmono-security4.0-cil_6.12.0.199+dfsg-1_all.deb ... Unpacking libmono-security4.0-cil (6.12.0.199+dfsg-1) ... Selecting previously unselected package mono-4.0-gac. Preparing to unpack .../23-mono-4.0-gac_6.12.0.199+dfsg-1_all.deb ... Unpacking mono-4.0-gac (6.12.0.199+dfsg-1) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up binutils-common:amd64 (2.43.1-5) ... Setting up libsframe1:amd64 (2.43.1-5) ... Setting up libbinutils:amd64 (2.43.1-5) ... Setting up libctf-nobfd0:amd64 (2.43.1-5) ... Setting up libctf0:amd64 (2.43.1-5) ... Setting up libgprofng0:amd64 (2.43.1-5) ... Setting up libjansson4:amd64 (2.14-2+b2) ... Setting up binutils-x86-64-linux-gnu (2.43.1-5) ... Setting up binutils (2.43.1-5) ... Setting up mono-runtime-common (6.12.0.199+dfsg-1) ... Selecting previously unselected package mono-gac. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5736 files and directories currently installed.) Preparing to unpack .../0-mono-gac_6.12.0.199+dfsg-1_all.deb ... Unpacking mono-gac (6.12.0.199+dfsg-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../1-libicu72_72.1-5_amd64.deb ... Unpacking libicu72:amd64 (72.1-5) ... Selecting previously unselected package mono-runtime-sgen. Preparing to unpack .../2-mono-runtime-sgen_6.12.0.199+dfsg-1_amd64.deb ... Unpacking mono-runtime-sgen (6.12.0.199+dfsg-1) ... Selecting previously unselected package mono-runtime. Preparing to unpack .../3-mono-runtime_6.12.0.199+dfsg-1_amd64.deb ... Unpacking mono-runtime (6.12.0.199+dfsg-1) ... Selecting previously unselected package libmono-corlib4.5-cil. Preparing to unpack .../4-libmono-corlib4.5-cil_6.12.0.199+dfsg-1_all.deb ... Unpacking libmono-corlib4.5-cil (6.12.0.199+dfsg-1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../5-libxml2_2.12.7+dfsg+really2.9.14-0.1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Selecting previously unselected package libsbml5t64:amd64. Preparing to unpack .../6-libsbml5t64_5.20.2+dfsg-8_amd64.deb ... Unpacking libsbml5t64:amd64 (5.20.2+dfsg-8) ... Selecting previously unselected package libsbml5-dev. Preparing to unpack .../7-libsbml5-dev_5.20.2+dfsg-8_amd64.deb ... Unpacking libsbml5-dev (5.20.2+dfsg-8) ... Selecting previously unselected package libsbml5-cil. Preparing to unpack .../8-libsbml5-cil_5.20.2+dfsg-8_amd64.deb ... Unpacking libsbml5-cil (5.20.2+dfsg-8) ... Setting up libicu72:amd64 (72.1-5) ... Setting up libmono-corlib4.5-dll (6.12.0.199+dfsg-1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up libsbml5t64:amd64 (5.20.2+dfsg-8) ... Setting up libmono-system-numerics4.0-cil (6.12.0.199+dfsg-1) ... Setting up libsbml5-dev (5.20.2+dfsg-8) ... Setting up libmono-system-xml4.0-cil (6.12.0.199+dfsg-1) ... Setting up libmono-system-core4.0-cil (6.12.0.199+dfsg-1) ... Setting up libmono-system-security4.0-cil (6.12.0.199+dfsg-1) ... Setting up libmono-system4.0-cil (6.12.0.199+dfsg-1) ... Setting up libmono-system-configuration4.0-cil (6.12.0.199+dfsg-1) ... Setting up libmono-security4.0-cil (6.12.0.199+dfsg-1) ... Setting up mono-4.0-gac (6.12.0.199+dfsg-1) ... Setting up mono-gac (6.12.0.199+dfsg-1) ... update-alternatives: using /usr/bin/gacutil to provide /usr/bin/cli-gacutil (global-assembly-cache-tool) in auto mode Setting up mono-runtime-sgen (6.12.0.199+dfsg-1) ... Setting up mono-runtime (6.12.0.199+dfsg-1) ... update-alternatives: using /usr/bin/mono to provide /usr/bin/cli (cli) in auto mode Setting up libmono-corlib4.5-cil (6.12.0.199+dfsg-1) ... Setting up libsbml5-cil (5.20.2+dfsg-8) ... Processing triggers for libc-bin (2.40-3) ... 0m20.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-y', 'install', 'libsbml5-cil'] 0m20.6s INFO: Running scripts post_install 0m20.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_install_exceptions'] 0m20.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_install_exceptions'] 0m20.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m21.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m21.1s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpj6hi43sg to sid 0m21.1s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m21.1s INFO: Running scripts pre_distupgrade 0m21.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m21.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m21.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_exceptions'] 0m21.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_exceptions'] 0m21.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m21.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m21.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m21.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m21.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m21.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m21.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', 'update'] 0m26.2s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [202 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.0 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7340 kB] Fetched 17.6 MB in 4s (4747 kB/s) Reading package lists... 0m26.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', 'update'] 0m26.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-yf', 'dist-upgrade'] 0m36.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: gpgv hostname libattr1 libaudit-common libaudit1 libdb5.3t64 libmono-corlib4.5-cil libmono-corlib4.5-dll libmono-security4.0-cil libmono-system-configuration4.0-cil libmono-system-core4.0-cil libmono-system-numerics4.0-cil libmono-system-security4.0-cil libmono-system-xml4.0-cil libmono-system4.0-cil libsbml5-cil libsbml5-dev libsbml5t64 mono-4.0-gac mono-gac mono-runtime mono-runtime-common mono-runtime-sgen perl-base sysvinit-utils tzdata 26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 17.6 MB of archives. After this operation, 605 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 hostname amd64 3.25 [11.0 kB] Get:2 http://deb.debian.org/debian sid/main amd64 perl-base amd64 5.40.0-6 [1675 kB] Get:3 http://deb.debian.org/debian sid/main amd64 sysvinit-utils amd64 3.10-3 [33.0 kB] Get:4 http://deb.debian.org/debian sid/main amd64 mono-runtime amd64 6.12.0.199+dfsg-2 [17.8 kB] Get:5 http://deb.debian.org/debian sid/main amd64 mono-runtime-sgen amd64 6.12.0.199+dfsg-2 [1684 kB] Get:6 http://deb.debian.org/debian sid/main amd64 mono-runtime-common amd64 6.12.0.199+dfsg-2 [1187 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libmono-corlib4.5-dll all 6.12.0.199+dfsg-2 [1254 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libmono-corlib4.5-cil all 6.12.0.199+dfsg-2 [16.1 kB] Get:9 http://deb.debian.org/debian sid/main amd64 tzdata all 2024b-3 [255 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libmono-system-core4.0-cil all 6.12.0.199+dfsg-2 [305 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libmono-system-numerics4.0-cil all 6.12.0.199+dfsg-2 [51.9 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libmono-system-xml4.0-cil all 6.12.0.199+dfsg-2 [818 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libmono-system-security4.0-cil all 6.12.0.199+dfsg-2 [117 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libmono-system-configuration4.0-cil all 6.12.0.199+dfsg-2 [58.0 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libmono-system4.0-cil all 6.12.0.199+dfsg-2 [806 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libmono-security4.0-cil all 6.12.0.199+dfsg-2 [98.4 kB] Get:17 http://deb.debian.org/debian sid/main amd64 mono-gac all 6.12.0.199+dfsg-2 [21.9 kB] Get:18 http://deb.debian.org/debian sid/main amd64 mono-4.0-gac all 6.12.0.199+dfsg-2 [157 kB] Get:19 http://deb.debian.org/debian sid/main amd64 gpgv amd64 2.2.44-1 [218 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libattr1 amd64 1:2.5.2-2 [22.7 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libaudit-common all 1:4.0.1-1 [12.3 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libaudit1 amd64 1:4.0.1-1 [54.5 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-9 [704 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libsbml5-dev amd64 5.20.2+dfsg-8+b1 [3173 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libsbml5t64 amd64 5.20.2+dfsg-8+b1 [2144 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libsbml5-cil amd64 5.20.2+dfsg-8+b1 [2674 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 17.6 MB in 0s (72.9 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6287 files and directories currently installed.) Preparing to unpack .../hostname_3.25_amd64.deb ... Unpacking hostname (3.25) over (3.23+nmu2) ... Setting up hostname (3.25) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6287 files and directories currently installed.) Preparing to unpack .../perl-base_5.40.0-6_amd64.deb ... Unpacking perl-base (5.40.0-6) over (5.38.2-5) ... Setting up perl-base (5.40.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6286 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.10-3_amd64.deb ... Unpacking sysvinit-utils (3.10-3) over (3.10-2) ... Setting up sysvinit-utils (3.10-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6286 files and directories currently installed.) Preparing to unpack .../00-mono-runtime_6.12.0.199+dfsg-2_amd64.deb ... Unpacking mono-runtime (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../01-mono-runtime-sgen_6.12.0.199+dfsg-2_amd64.deb ... Unpacking mono-runtime-sgen (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../02-mono-runtime-common_6.12.0.199+dfsg-2_amd64.deb ... Unpacking mono-runtime-common (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../03-libmono-corlib4.5-dll_6.12.0.199+dfsg-2_all.deb ... Unpacking libmono-corlib4.5-dll (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../04-libmono-corlib4.5-cil_6.12.0.199+dfsg-2_all.deb ... Unpacking libmono-corlib4.5-cil (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../05-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) over (2024a-4) ... Preparing to unpack .../06-libmono-system-core4.0-cil_6.12.0.199+dfsg-2_all.deb ... Unpacking libmono-system-core4.0-cil (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../07-libmono-system-numerics4.0-cil_6.12.0.199+dfsg-2_all.deb ... Unpacking libmono-system-numerics4.0-cil (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../08-libmono-system-xml4.0-cil_6.12.0.199+dfsg-2_all.deb ... Unpacking libmono-system-xml4.0-cil (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../09-libmono-system-security4.0-cil_6.12.0.199+dfsg-2_all.deb ... Unpacking libmono-system-security4.0-cil (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../10-libmono-system-configuration4.0-cil_6.12.0.199+dfsg-2_all.deb ... Unpacking libmono-system-configuration4.0-cil (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../11-libmono-system4.0-cil_6.12.0.199+dfsg-2_all.deb ... Unpacking libmono-system4.0-cil (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../12-libmono-security4.0-cil_6.12.0.199+dfsg-2_all.deb ... Unpacking libmono-security4.0-cil (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Setting up mono-runtime-common (6.12.0.199+dfsg-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6274 files and directories currently installed.) Preparing to unpack .../mono-gac_6.12.0.199+dfsg-2_all.deb ... Unpacking mono-gac (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../mono-4.0-gac_6.12.0.199+dfsg-2_all.deb ... Unpacking mono-4.0-gac (6.12.0.199+dfsg-2) over (6.12.0.199+dfsg-1) ... Preparing to unpack .../gpgv_2.2.44-1_amd64.deb ... Unpacking gpgv (2.2.44-1) over (2.2.43-8+b1) ... Setting up gpgv (2.2.44-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6273 files and directories currently installed.) Preparing to unpack .../libattr1_1%3a2.5.2-2_amd64.deb ... Unpacking libattr1:amd64 (1:2.5.2-2) over (1:2.5.2-1) ... Setting up libattr1:amd64 (1:2.5.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6273 files and directories currently installed.) Preparing to unpack .../libaudit-common_1%3a4.0.1-1_all.deb ... Unpacking libaudit-common (1:4.0.1-1) over (1:3.1.2-4) ... Setting up libaudit-common (1:4.0.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6273 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a4.0.1-1_amd64.deb ... Unpacking libaudit1:amd64 (1:4.0.1-1) over (1:3.1.2-4+b1) ... Setting up libaudit1:amd64 (1:4.0.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6272 files and directories currently installed.) Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-9_amd64.deb ... Unpacking libdb5.3t64:amd64 (5.3.28+dfsg2-9) over (5.3.28+dfsg2-7) ... Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6272 files and directories currently installed.) Preparing to unpack .../libsbml5-dev_5.20.2+dfsg-8+b1_amd64.deb ... Unpacking libsbml5-dev (5.20.2+dfsg-8+b1) over (5.20.2+dfsg-8) ... Preparing to unpack .../libsbml5t64_5.20.2+dfsg-8+b1_amd64.deb ... Unpacking libsbml5t64:amd64 (5.20.2+dfsg-8+b1) over (5.20.2+dfsg-8) ... Preparing to unpack .../libsbml5-cil_5.20.2+dfsg-8+b1_amd64.deb ... Unpacking libsbml5-cil (5.20.2+dfsg-8+b1) over (5.20.2+dfsg-8) ... Setting up libsbml5t64:amd64 (5.20.2+dfsg-8+b1) ... Setting up libsbml5-dev (5.20.2+dfsg-8+b1) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Tue Oct 15 23:06:32 UTC 2024. Universal Time is now: Tue Oct 15 23:06:32 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libmono-corlib4.5-dll (6.12.0.199+dfsg-2) ... Setting up libmono-system-numerics4.0-cil (6.12.0.199+dfsg-2) ... Setting up libmono-system-xml4.0-cil (6.12.0.199+dfsg-2) ... Setting up libmono-system-configuration4.0-cil (6.12.0.199+dfsg-2) ... Setting up libmono-security4.0-cil (6.12.0.199+dfsg-2) ... Setting up libmono-system4.0-cil (6.12.0.199+dfsg-2) ... Setting up libmono-system-core4.0-cil (6.12.0.199+dfsg-2) ... Setting up libmono-system-security4.0-cil (6.12.0.199+dfsg-2) ... Setting up mono-4.0-gac (6.12.0.199+dfsg-2) ... Setting up mono-gac (6.12.0.199+dfsg-2) ... Setting up mono-runtime-sgen (6.12.0.199+dfsg-2) ... Setting up mono-runtime (6.12.0.199+dfsg-2) ... Setting up libmono-corlib4.5-cil (6.12.0.199+dfsg-2) ... Setting up libsbml5-cil (5.20.2+dfsg-8+b1) ... Processing triggers for libc-bin (2.40-3) ... 0m36.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-yf', 'dist-upgrade'] 0m36.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m37.4s DUMP: edcb85ec47c1a556c0717193df88558a - 0m37.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m37.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'show', '--no-all-versions', 'libsbml5-cil'] 0m37.7s DUMP: Package: libsbml5-cil Source: libsbml (5.20.2+dfsg-8) Version: 5.20.2+dfsg-8+b1 Installed-Size: 13174 Maintainer: Debian Med Packaging Team Architecture: amd64 Provides: libsbml-cil Depends: libbz2-1.0, libc6 (>= 2.38), libgcc-s1 (>= 3.0), libstdc++6 (>= 13.1), libxml2 (>= 2.7.4), zlib1g (>= 1:1.1.4), libmono-corlib4.5-cil (>= 5.18.0.240), libsbml5-dev Description-en: System Biology Markup Language library - CLI bindings LibSBML is a library designed to help you read, write, manipulate, translate, and validate SBML files and data streams. It is not an application itself (though it does come with many example programs), but rather a library you can embed in your own applications. . This package contains the CLI bindings of LibSBML. Description-md5: 6923ba76f814ada93ced1087327fce79 Homepage: http://www.sbml.org/ Section: cli-mono Priority: optional Filename: pool/main/libs/libsbml/libsbml5-cil_5.20.2+dfsg-8+b1_amd64.deb Size: 2673664 MD5sum: 0d9ebe1559821aba9b1e27109830d617 SHA256: b7f97f0110a38ad478b698fd7f1664e8983fe55699d75974d12345090a5a7aba 0m37.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'show', '--no-all-versions', 'libsbml5-cil'] 0m37.7s INFO: apt-cache knows about the following packages: libsbml5-cil 0m37.7s INFO: Running scripts pre_install 0m37.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_database-server'] 0m37.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_database-server'] 0m37.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_exceptions'] 0m37.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_exceptions'] 0m37.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_extras'] 0m37.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_extras'] 0m37.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture'] 0m37.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture'] 0m37.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m37.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m37.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy'] 0m37.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m37.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy'] 0m37.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy', 'libsbml5-cil'] 0m37.8s DUMP: libsbml5-cil: Installed: 5.20.2+dfsg-8+b1 Candidate: 5.20.2+dfsg-8+b1 Version table: *** 5.20.2+dfsg-8+b1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m37.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy', 'libsbml5-cil'] 0m37.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-y', 'install', 'libsbml5-cil'] 0m38.5s DUMP: Reading package lists... Building dependency tree... Reading state information... libsbml5-cil is already the newest version (5.20.2+dfsg-8+b1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-y', 'install', 'libsbml5-cil'] 0m38.5s INFO: Running scripts post_install 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_install_exceptions'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_install_exceptions'] 0m38.5s INFO: Running scripts post_distupgrade 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_exceptions'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_exceptions'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m38.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_zz_backports'] 0m38.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_distupgrade_zz_backports'] 0m38.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m39.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m39.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m39.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m39.4s INFO: Running scripts pre_install 0m39.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_database-server'] 0m39.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_database-server'] 0m39.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_exceptions'] 0m39.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_exceptions'] 0m39.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_extras'] 0m39.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_extras'] 0m39.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture'] 0m39.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture'] 0m39.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m39.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m39.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy'] 0m39.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m39.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy'] 0m39.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy', 'libsbml5-cil'] 0m39.6s DUMP: libsbml5-cil: Installed: 5.20.2+dfsg-8+b1 Candidate: 5.20.2+dfsg-8+b1 Version table: *** 5.20.2+dfsg-8+b1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m39.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-cache', 'policy', 'libsbml5-cil'] 0m39.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-y', 'install', 'libsbml5-cil=5.20.2+dfsg-8+b1'] 0m40.3s DUMP: Reading package lists... Building dependency tree... Reading state information... libsbml5-cil is already the newest version (5.20.2+dfsg-8+b1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m40.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', '-y', 'install', 'libsbml5-cil=5.20.2+dfsg-8+b1'] 0m40.3s INFO: Running scripts post_install 0m40.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_install_exceptions'] 0m40.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_install_exceptions'] 0m40.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m40.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m41.4s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', '-ac', '--ignore-obsolete'] 0m42.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', '-ac', '--ignore-obsolete'] 0m42.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m42.9s DUMP: 0.15.6 0m42.9s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m42.9s INFO: Running adequate version 0.15.6 now. 0m42.9s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'libsbml5-cil'] 0m43.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'libsbml5-cil'] 0m43.0s INFO: Running scripts pre_remove 0m43.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m43.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m43.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m44.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m44.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m44.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m44.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m44.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m44.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_exceptions'] 0m44.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/pre_remove_exceptions'] 0m44.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m44.2s DUMP: install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed binutils binutils 2.43.1-5 install ok installed binutils-common:amd64 binutils-common 2.43.1-5 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.43.1-5 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-6 install ok installed gpgv gpgv 2.2.44-1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.0.1-1 install ok installed libbinutils:amd64 libbinutils 2.43.1-5 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.43.1-5 install ok installed libctf0:amd64 libctf0 2.43.1-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libgprofng0:amd64 libgprofng0 2.43.1-5 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libicu72:amd64 libicu72 72.1-5 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libjansson4:amd64 libjansson4 2.14-2+b2 install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-3 install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-3 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmono-corlib4.5-cil libmono-corlib4.5-cil 6.12.0.199+dfsg-2 install ok installed libmono-corlib4.5-dll libmono-corlib4.5-dll 6.12.0.199+dfsg-2 install ok installed libmono-security4.0-cil libmono-security4.0-cil 6.12.0.199+dfsg-2 install ok installed libmono-system-configuration4.0-cil libmono-system-configuration4.0-cil 6.12.0.199+dfsg-2 install ok installed libmono-system-core4.0-cil libmono-system-core4.0-cil 6.12.0.199+dfsg-2 install ok installed libmono-system-numerics4.0-cil libmono-system-numerics4.0-cil 6.12.0.199+dfsg-2 install ok installed libmono-system-security4.0-cil libmono-system-security4.0-cil 6.12.0.199+dfsg-2 install ok installed libmono-system-xml4.0-cil libmono-system-xml4.0-cil 6.12.0.199+dfsg-2 install ok installed libmono-system4.0-cil libmono-system4.0-cil 6.12.0.199+dfsg-2 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libsbml5-cil libsbml5-cil 5.20.2+dfsg-8+b1 install ok installed libsbml5-dev libsbml5-dev 5.20.2+dfsg-8+b1 install ok installed libsbml5t64:amd64 libsbml5t64 5.20.2+dfsg-8+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsframe1:amd64 libsframe1 2.43.1-5 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-6 install ok installed libsystemd0:amd64 libsystemd0 256.7-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.7-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libxml2:amd64 libxml2 2.12.7+dfsg+really2.9.14-0.1 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mono-4.0-gac mono-4.0-gac 6.12.0.199+dfsg-2 install ok installed mono-gac mono-gac 6.12.0.199+dfsg-2 install ok installed mono-runtime mono-runtime 6.12.0.199+dfsg-2 install ok installed mono-runtime-common mono-runtime-common 6.12.0.199+dfsg-2 install ok installed mono-runtime-sgen mono-runtime-sgen 6.12.0.199+dfsg-2 install ok installed mount mount 2.40.2-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.40.0-6 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.10-3 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-3 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m44.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m44.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'libbinutils:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libicu72:amd64', 'libjansson4:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libmono-corlib4.5-cil', 'libmono-corlib4.5-dll', 'libmono-security4.0-cil', 'libmono-system-configuration4.0-cil', 'libmono-system-core4.0-cil', 'libmono-system-numerics4.0-cil', 'libmono-system-security4.0-cil', 'libmono-system-xml4.0-cil', 'libmono-system4.0-cil', 'libsbml5-dev', 'libsbml5t64:amd64', 'libsframe1:amd64', 'libxml2:amd64', 'mono-4.0-gac', 'mono-gac', 'mono-runtime', 'mono-runtime-common', 'mono-runtime-sgen', 'libsbml5-cil'] 0m45.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: binutils binutils-common binutils-x86-64-linux-gnu libbinutils libctf-nobfd0 libctf0 libgprofng0 libgssapi-krb5-2 libicu72 libjansson4 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libmono-corlib4.5-cil libmono-corlib4.5-dll libmono-security4.0-cil libmono-system-configuration4.0-cil libmono-system-core4.0-cil libmono-system-numerics4.0-cil libmono-system-security4.0-cil libmono-system-xml4.0-cil libmono-system4.0-cil libsbml5-cil libsbml5-dev libsbml5t64 libsframe1 libxml2 mono-4.0-gac mono-gac mono-runtime mono-runtime-common mono-runtime-sgen 0 upgraded, 0 newly installed, 33 to remove and 0 not upgraded. After this operation, 157 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6275 files and directories currently installed.) Removing libsbml5-cil (5.20.2+dfsg-8+b1) ... Removing libmono-corlib4.5-cil (6.12.0.199+dfsg-2) ... Removing mono-runtime (6.12.0.199+dfsg-2) ... Removing mono-runtime-sgen (6.12.0.199+dfsg-2) ... Removing mono-gac (6.12.0.199+dfsg-2) ... Removing mono-runtime-common (6.12.0.199+dfsg-2) ... Removing binutils (2.43.1-5) ... Removing binutils-x86-64-linux-gnu (2.43.1-5) ... Removing libgprofng0:amd64 (2.43.1-5) ... Removing libctf0:amd64 (2.43.1-5) ... Removing libbinutils:amd64 (2.43.1-5) ... Removing binutils-common:amd64 (2.43.1-5) ... Removing libctf-nobfd0:amd64 (2.43.1-5) ... Removing libgssapi-krb5-2:amd64 (1.21.3-3) ... Removing libsbml5-dev (5.20.2+dfsg-8+b1) ... Removing libsbml5t64:amd64 (5.20.2+dfsg-8+b1) ... Removing libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Removing libicu72:amd64 (72.1-5) ... Removing libjansson4:amd64 (2.14-2+b2) ... Removing libkrb5-3:amd64 (1.21.3-3) ... Removing libk5crypto3:amd64 (1.21.3-3) ... Removing libkeyutils1:amd64 (1.6.3-3) ... Removing libkrb5support0:amd64 (1.21.3-3) ... Removing mono-4.0-gac (6.12.0.199+dfsg-2) ... Removing libsframe1:amd64 (2.43.1-5) ... Removing libmono-system-security4.0-cil (6.12.0.199+dfsg-2) ... Removing libmono-system4.0-cil (6.12.0.199+dfsg-2) ... Removing libmono-security4.0-cil (6.12.0.199+dfsg-2) ... Removing libmono-system-core4.0-cil (6.12.0.199+dfsg-2) ... Removing libmono-system-numerics4.0-cil (6.12.0.199+dfsg-2) ... Removing libmono-system-xml4.0-cil (6.12.0.199+dfsg-2) ... Removing libmono-system-configuration4.0-cil (6.12.0.199+dfsg-2) ... Removing libmono-corlib4.5-dll (6.12.0.199+dfsg-2) ... Processing triggers for libc-bin (2.40-3) ... 0m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'libbinutils:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libicu72:amd64', 'libjansson4:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libmono-corlib4.5-cil', 'libmono-corlib4.5-dll', 'libmono-security4.0-cil', 'libmono-system-configuration4.0-cil', 'libmono-system-core4.0-cil', 'libmono-system-numerics4.0-cil', 'libmono-system-security4.0-cil', 'libmono-system-xml4.0-cil', 'libmono-system4.0-cil', 'libsbml5-dev', 'libsbml5t64:amd64', 'libsframe1:amd64', 'libxml2:amd64', 'mono-4.0-gac', 'mono-gac', 'mono-runtime', 'mono-runtime-common', 'mono-runtime-sgen', 'libsbml5-cil'] 0m45.2s INFO: Running scripts post_remove 0m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_remove_exceptions'] 0m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_remove_exceptions'] 0m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'libbinutils:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libicu72:amd64', 'libjansson4:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libmono-corlib4.5-cil', 'libmono-corlib4.5-dll', 'libmono-security4.0-cil', 'libmono-system-configuration4.0-cil', 'libmono-system-core4.0-cil', 'libmono-system-numerics4.0-cil', 'libmono-system-security4.0-cil', 'libmono-system-xml4.0-cil', 'libmono-system4.0-cil', 'libsbml5-dev', 'libsbml5t64:amd64', 'libsframe1:amd64', 'libxml2:amd64', 'mono-4.0-gac', 'mono-gac', 'mono-runtime', 'mono-runtime-common', 'mono-runtime-sgen'] 0m45.2s DUMP: dpkg: warning: ignoring request to remove binutils which isn't installed (Reading database ... 5155 files and directories currently installed.) Purging configuration files for binutils-common:amd64 (2.43.1-5) ... dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove libbinutils which isn't installed dpkg: warning: ignoring request to remove libctf-nobfd0 which isn't installed dpkg: warning: ignoring request to remove libctf0 which isn't installed dpkg: warning: ignoring request to remove libgprofng0 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.21.3-3) ... dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libjansson4 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove libmono-corlib4.5-cil which isn't installed dpkg: warning: ignoring request to remove libmono-corlib4.5-dll which isn't installed dpkg: warning: ignoring request to remove libmono-security4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system-configuration4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system-core4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system-numerics4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system-security4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system-xml4.0-cil which isn't installed dpkg: warning: ignoring request to remove libmono-system4.0-cil which isn't installed dpkg: warning: ignoring request to remove libsbml5-dev which isn't installed dpkg: warning: ignoring request to remove libsbml5t64 which isn't installed dpkg: warning: ignoring request to remove libsframe1 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove mono-4.0-gac which isn't installed dpkg: warning: ignoring request to remove mono-gac which isn't installed dpkg: warning: ignoring request to remove mono-runtime which isn't installed Purging configuration files for mono-runtime-common (6.12.0.199+dfsg-2) ... dpkg: warning: ignoring request to remove mono-runtime-sgen which isn't installed 0m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'libbinutils:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libicu72:amd64', 'libjansson4:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libmono-corlib4.5-cil', 'libmono-corlib4.5-dll', 'libmono-security4.0-cil', 'libmono-system-configuration4.0-cil', 'libmono-system-core4.0-cil', 'libmono-system-numerics4.0-cil', 'libmono-system-security4.0-cil', 'libmono-system-xml4.0-cil', 'libmono-system4.0-cil', 'libsbml5-dev', 'libsbml5t64:amd64', 'libsframe1:amd64', 'libxml2:amd64', 'mono-4.0-gac', 'mono-gac', 'mono-runtime', 'mono-runtime-common', 'mono-runtime-sgen'] 0m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg', '--purge', 'libsbml5-cil'] 0m45.2s DUMP: dpkg: warning: ignoring request to remove libsbml5-cil which isn't installed 0m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg', '--purge', 'libsbml5-cil'] 0m45.2s INFO: Running scripts post_purge 0m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_purge_exceptions'] 0m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_purge_exceptions'] 0m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg', '--purge', '--pending'] 0m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg', '--purge', '--pending'] 0m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg', '--remove', '--pending'] 0m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg', '--remove', '--pending'] 0m45.2s INFO: Running scripts post_test 0m45.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_test_exceptions'] 0m45.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'tmp/scripts/post_test_exceptions'] 0m45.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m45.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m45.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg-divert', '--list'] 0m45.7s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m45.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'dpkg-divert', '--list'] 0m45.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', 'clean'] 0m45.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg', 'apt-get', 'clean'] 0m45.7s DEBUG: Recording chroot state 0m47.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/shm'] 0m47.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/shm'] 0m47.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/console'] 0m47.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/console'] 0m47.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/ptmx'] 0m47.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/ptmx'] 0m47.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/pts'] 0m47.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/dev/pts'] 0m47.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/proc'] 0m47.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg/proc'] 0m47.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m47.2s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpj6hi43sg'] 0m47.2s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpj6hi43sg 0m47.3s INFO: PASS: Upgrading between Debian distributions. 0m47.3s INFO: PASS: All tests. 0m47.3s INFO: piuparts run ends. ret=0 End: 2024-10-15 23:06:49 GMT