Start: 2024-10-30 05:43:36 GMT [testing] Package: libsimtkmolmodel-plugins Source: molmodel (3.1.0-4.1) Version: 3.1.0-4.1+b2 Installed-Size: 65 Maintainer: Debichem Team Architecture: amd64 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), libopenmm8.1 (>= 8.1.0+dfsg), libsimbody3.7 (>= 3.7+dfsg), libsimtkmolmodel3.1t64 (>= 3.1.0), libstdc++6 (>= 13.1) Description: Plugins for C++ API for creating molecular models for SimTK Homepage: https://simtk.org/projects/molmodel Description-md5: 303ea0d38f55e1e6c188aa1f6286799c Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/m/molmodel/libsimtkmolmodel-plugins_3.1.0-4.1+b2_amd64.deb Size: 20036 MD5sum: ddd73a8768e577c29b38ec6f614c9754 SHA256: cfc47d57b9939411d8f5f8036700169b51e0da7752e60c17df703d68faf6b4cb [sid] Package: libsimtkmolmodel-plugins Source: molmodel (3.1.0-4.1) Version: 3.1.0-4.1+b3 Installed-Size: 61 Maintainer: Debichem Team Architecture: amd64 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), libopenmm8.1 (>= 8.1.2+dfsg), libsimbody3.7 (>= 3.7+dfsg), libsimtkmolmodel3.1t64 (>= 3.1.0), libstdc++6 (>= 13.1) Description: Plugins for C++ API for creating molecular models for SimTK Homepage: https://simtk.org/projects/molmodel Description-md5: 303ea0d38f55e1e6c188aa1f6286799c Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/m/molmodel/libsimtkmolmodel-plugins_3.1.0-4.1+b3_amd64.deb Size: 19576 MD5sum: 545fe04093c3e9ba5e54ffa7c20cafd6 SHA256: d45d004e455c7af7055d5a340a3a9560607d6af66006a27369f31389781c0207 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libsimtkmolmodel-plugins=3.1.0-4.1+b3 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt libsimtkmolmodel-plugins=3.1.0-4.1+b3 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmppsme1ig_ 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmppsme1ig_ 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/proc'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/proc'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/pts'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/pts'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/ptmx'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/ptmx'] 0m0.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/console'] 0m0.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/console'] 0m0.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/shm'] 0m0.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/shm'] 0m0.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.2s DEBUG: Created policy-rc.d and chmodded it. 0m0.2s DEBUG: Created resolv.conf. 0m0.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmppsme1ig_/tmp/scripts/ 0m0.3s INFO: Running scripts post_chroot_unpack 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', 'update'] 0m1.6s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [172 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9350 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6243 kB] Fetched 15.8 MB in 1s (18.5 MB/s) Reading package lists... 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', 'update'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-yf', 'dist-upgrade'] 0m3.1s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: apt base-passwd e2fsprogs libacl1 libapt-pkg6.0t64 libcom-err2 libdebconfclient0 libext2fs2t64 liblzma5 libss2 logsave sysvinit-utils 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 3730 kB of archives. After this operation, 45.1 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 liblzma5 amd64 5.6.3-1 [272 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libapt-pkg6.0t64 amd64 2.9.10 [1045 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libdebconfclient0 amd64 0.272+b1 [10.3 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 base-passwd amd64 3.6.5 [53.1 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 apt amd64 2.9.10 [1413 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 sysvinit-utils amd64 3.11-1 [33.1 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 logsave amd64 1.47.1-1+b1 [23.0 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libext2fs2t64 amd64 1.47.1-1+b1 [211 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 e2fsprogs amd64 1.47.1-1+b1 [585 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libss2 amd64 1.47.1-1+b1 [27.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3730 kB in 0s (78.6 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5139 files and directories currently installed.) Preparing to unpack .../liblzma5_5.6.3-1_amd64.deb ... Unpacking liblzma5:amd64 (5.6.3-1) over (5.6.2-2) ... Setting up liblzma5:amd64 (5.6.3-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5139 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.10_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.10) over (2.9.8) ... Setting up libapt-pkg6.0t64:amd64 (2.9.10) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5139 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.272+b1_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.272+b1) over (0.272) ... Setting up libdebconfclient0:amd64 (0.272+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5140 files and directories currently installed.) Preparing to unpack .../base-passwd_3.6.5_amd64.deb ... Unpacking base-passwd (3.6.5) over (3.6.4) ... Setting up base-passwd (3.6.5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5143 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.10_amd64.deb ... Unpacking apt (2.9.10) over (2.9.8) ... Setting up apt (2.9.10) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5143 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.11-1_amd64.deb ... Unpacking sysvinit-utils (3.11-1) over (3.10-3) ... Setting up sysvinit-utils (3.11-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5143 files and directories currently installed.) Preparing to unpack .../logsave_1.47.1-1+b1_amd64.deb ... Unpacking logsave (1.47.1-1+b1) over (1.47.1-1) ... Preparing to unpack .../libext2fs2t64_1.47.1-1+b1_amd64.deb ... Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Setting up libext2fs2t64:amd64 (1.47.1-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5145 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.47.1-1+b1_amd64.deb ... Unpacking e2fsprogs (1.47.1-1+b1) over (1.47.1-1) ... Preparing to unpack .../libacl1_2.3.2-2+b1_amd64.deb ... Unpacking libacl1:amd64 (2.3.2-2+b1) over (2.3.2-2) ... Setting up libacl1:amd64 (2.3.2-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5147 files and directories currently installed.) Preparing to unpack .../libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Preparing to unpack .../libss2_1.47.1-1+b1_amd64.deb ... Unpacking libss2:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Setting up libcom-err2:amd64 (1.47.1-1+b1) ... Setting up libss2:amd64 (1.47.1-1+b1) ... Setting up logsave (1.47.1-1+b1) ... Setting up e2fsprogs (1.47.1-1+b1) ... Processing triggers for libc-bin (2.40-3) ... 0m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-yf', 'dist-upgrade'] 0m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.6s DUMP: cab96d2d1756c9005fc69ee9491da3cd - 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.6s INFO: Running scripts post_setup 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_dummy_users'] 0m4.1s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_dummy_users'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_forbid_home'] 0m4.1s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_forbid_home'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.1s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_minimize'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_minimize'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_zz_backports'] 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_setup_zz_backports'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.1s DUMP: install ok installed apt apt 2.9.10 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.32-1+b2 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1+b1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-6 install ok installed gpgv gpgv 2.2.44-1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.10 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-3 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272+b1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.3-1 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libss2:amd64 libss2 1.47.1-1+b1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-6 install ok installed libsystemd0:amd64 libsystemd0 256.7-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.7-2 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1+b1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.40.0-6 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.1s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m4.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m4.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m4.3s INFO: Running scripts is_testable 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/is_testable_uninstallable'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/is_testable_uninstallable'] 0m4.3s INFO: Running scripts pre_test 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_test_exceptions'] 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_test_exceptions'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_test_root_password'] 0m4.4s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_test_root_password'] 0m4.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'show', '--no-all-versions', 'libsimtkmolmodel-plugins'] 0m4.5s DUMP: Package: libsimtkmolmodel-plugins Source: molmodel (3.1.0-4.1) Version: 3.1.0-4.1+b2 Installed-Size: 65 Maintainer: Debichem Team Architecture: amd64 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), libopenmm8.1 (>= 8.1.0+dfsg), libsimbody3.7 (>= 3.7+dfsg), libsimtkmolmodel3.1t64 (>= 3.1.0), libstdc++6 (>= 13.1) Description-en: Plugins for C++ API for creating molecular models for SimTK Provides C++ API for creating molecular models whose dynamics can be simulated using the SimTK Simbody library. Molmodel is a programmer's toolkit for building reduced-coordinate, yet still all-atom, models of large biopolymers such as proteins, RNA, and DNA. One can control the allowed mobility. By default, Molmodel builds torsion-coordinate models in which bond stretch and bend angles are rigid while bond torsion angles are mobile. But one is able to rigidify or free any subsets of the atoms, such as the rigid benzene ring. . Molmodel is a C++ API for biochemist-friendly molecular modeling that extends the Simbody API to simplify construction of high-performance articulated models of molecules. . This package provides Molmodel plugins. Description-md5: 303ea0d38f55e1e6c188aa1f6286799c Homepage: https://simtk.org/projects/molmodel Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/m/molmodel/libsimtkmolmodel-plugins_3.1.0-4.1+b2_amd64.deb Size: 20036 MD5sum: ddd73a8768e577c29b38ec6f614c9754 SHA256: cfc47d57b9939411d8f5f8036700169b51e0da7752e60c17df703d68faf6b4cb 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'show', '--no-all-versions', 'libsimtkmolmodel-plugins'] 0m4.5s INFO: apt-cache knows about the following packages: libsimtkmolmodel-plugins 0m4.5s INFO: Running scripts pre_install 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_database-server'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_database-server'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_exceptions'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_exceptions'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_extras'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_extras'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy'] 0m4.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy', 'libsimtkmolmodel-plugins'] 0m4.6s DUMP: libsimtkmolmodel-plugins: Installed: (none) Candidate: 3.1.0-4.1+b2 Version table: 3.1.0-4.1+b2 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy', 'libsimtkmolmodel-plugins'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-y', 'install', 'libsimtkmolmodel-plugins'] 0m8.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libblas3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libedit2 libelf1t64 libexpat1 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglu1-mesa libglut3.12 libglvnd0 libglx-mesa0 libglx0 libicu72 liblapack3 libllvm19 libopengl0 libopenmm8.1 libpciaccess0 libsensors-config libsensors5 libsimbody3.7 libsimtkmolmodel3.1t64 libvulkan1 libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxfixes3 libxi6 libxml2 libxshmfence1 libxxf86vm1 libz3-4 mesa-libgallium Suggested packages: pciutils lm-sensors Recommended packages: mesa-vulkan-drivers | vulkan-icd The following NEW packages will be installed: libblas3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libedit2 libelf1t64 libexpat1 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglu1-mesa libglut3.12 libglvnd0 libglx-mesa0 libglx0 libicu72 liblapack3 libllvm19 libopengl0 libopenmm8.1 libpciaccess0 libsensors-config libsensors5 libsimbody3.7 libsimtkmolmodel-plugins libsimtkmolmodel3.1t64 libvulkan1 libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxfixes3 libxi6 libxml2 libxshmfence1 libxxf86vm1 libz3-4 mesa-libgallium 0 upgraded, 54 newly installed, 0 to remove and 0 not upgraded. Need to get 65.3 MB of archives. After this operation, 278 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get:3 http://deb.debian.org/debian trixie/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libpciaccess0 amd64 0.17-3+b1 [51.9 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.3-1 [105 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libwayland-server0 amd64 1.23.0-1 [34.0 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 libxcb-randr0 amd64 1.17.0-2 [116 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libglapi-mesa amd64 24.2.4-1 [37.9 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 libllvm19 amd64 1:19.1.2-1 [26.0 MB] Get:21 http://deb.debian.org/debian trixie/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get:22 http://deb.debian.org/debian trixie/main amd64 libsensors5 amd64 1:3.6.0-10 [34.7 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 libx11-xcb1 amd64 2:1.8.7-1+b1 [232 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [106 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [107 kB] Get:28 http://deb.debian.org/debian trixie/main amd64 libxcb-present0 amd64 1.17.0-2 [105 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libxcb-sync1 amd64 1.17.0-2 [108 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [109 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libxshmfence1 amd64 1.3-1+b1 [8852 B] Get:32 http://deb.debian.org/debian trixie/main amd64 mesa-libgallium amd64 24.2.4-1 [9182 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libgbm1 amd64 24.2.4-1 [42.7 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-6 [836 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 libglvnd0 amd64 1.7.0-1+b1 [56.3 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 libxcb-glx0 amd64 1.17.0-2 [122 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 libxcb-shm0 amd64 1.17.0-2 [105 kB] Get:38 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get:39 http://deb.debian.org/debian trixie/main amd64 libxfixes3 amd64 1:6.0.0-2+b1 [20.3 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b3 [19.3 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 libvulkan1 amd64 1.3.296.0-1 [126 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 libgl1-mesa-dri amd64 24.2.4-1 [43.8 kB] Get:43 http://deb.debian.org/debian trixie/main amd64 libglx-mesa0 amd64 24.2.4-1 [154 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 libglx0 amd64 1.7.0-1+b1 [35.0 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 libgl1 amd64 1.7.0-1+b1 [89.8 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 libopengl0 amd64 1.7.0-1+b1 [31.1 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 libglu1-mesa amd64 9.0.2-1.1+b1 [180 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 libglut3.12 amd64 3.4.0-1+b2 [139 kB] Get:50 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get:51 http://deb.debian.org/debian trixie/main amd64 libopenmm8.1 amd64 8.1.2+dfsg-1 [1058 kB] Get:52 http://deb.debian.org/debian trixie/main amd64 libsimbody3.7 amd64 3.7+dfsg-3+b1 [3363 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 libsimtkmolmodel3.1t64 amd64 3.1.0-4.1+b2 [671 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libsimtkmolmodel-plugins amd64 3.1.0-4.1+b2 [20.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 65.3 MB in 1s (51.9 MB/s) Selecting previously unselected package libblas3:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5153 files and directories currently installed.) Preparing to unpack .../00-libblas3_3.12.0-3_amd64.deb ... Unpacking libblas3:amd64 (3.12.0-3) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../01-libdrm-common_2.4.123-1_all.deb ... Unpacking libdrm-common (2.4.123-1) ... Selecting previously unselected package libdrm2:amd64. Preparing to unpack .../02-libdrm2_2.4.123-1_amd64.deb ... Unpacking libdrm2:amd64 (2.4.123-1) ... Selecting previously unselected package libdrm-amdgpu1:amd64. Preparing to unpack .../03-libdrm-amdgpu1_2.4.123-1_amd64.deb ... Unpacking libdrm-amdgpu1:amd64 (2.4.123-1) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../04-libpciaccess0_0.17-3+b1_amd64.deb ... Unpacking libpciaccess0:amd64 (0.17-3+b1) ... Selecting previously unselected package libdrm-intel1:amd64. Preparing to unpack .../05-libdrm-intel1_2.4.123-1_amd64.deb ... Unpacking libdrm-intel1:amd64 (2.4.123-1) ... Selecting previously unselected package libdrm-radeon1:amd64. Preparing to unpack .../06-libdrm-radeon1_2.4.123-1_amd64.deb ... Unpacking libdrm-radeon1:amd64 (2.4.123-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../07-libedit2_3.1-20240808-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20240808-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../08-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../09-libexpat1_2.6.3-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-1) ... Selecting previously unselected package libwayland-server0:amd64. Preparing to unpack .../10-libwayland-server0_1.23.0-1_amd64.deb ... Unpacking libwayland-server0:amd64 (1.23.0-1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../11-libxau6_1%3a1.0.9-1+b1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1+b1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../12-libxdmcp6_1%3a1.1.2-3+b1_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../13-libxcb1_1.17.0-2_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2) ... Selecting previously unselected package libxcb-randr0:amd64. Preparing to unpack .../14-libxcb-randr0_1.17.0-2_amd64.deb ... Unpacking libxcb-randr0:amd64 (1.17.0-2) ... Selecting previously unselected package libglapi-mesa:amd64. Preparing to unpack .../15-libglapi-mesa_24.2.4-1_amd64.deb ... Unpacking libglapi-mesa:amd64 (24.2.4-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../16-libicu72_72.1-5_amd64.deb ... Unpacking libicu72:amd64 (72.1-5) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../17-libxml2_2.12.7+dfsg+really2.9.14-0.1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../18-libz3-4_4.8.12-3.1+b2_amd64.deb ... Unpacking libz3-4:amd64 (4.8.12-3.1+b2) ... Selecting previously unselected package libllvm19:amd64. Preparing to unpack .../19-libllvm19_1%3a19.1.2-1_amd64.deb ... Unpacking libllvm19:amd64 (1:19.1.2-1) ... Selecting previously unselected package libsensors-config. Preparing to unpack .../20-libsensors-config_1%3a3.6.0-10_all.deb ... Unpacking libsensors-config (1:3.6.0-10) ... Selecting previously unselected package libsensors5:amd64. Preparing to unpack .../21-libsensors5_1%3a3.6.0-10_amd64.deb ... Unpacking libsensors5:amd64 (1:3.6.0-10) ... Selecting previously unselected package libx11-data. Preparing to unpack .../22-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../23-libx11-6_2%3a1.8.7-1+b1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.7-1+b1) ... Selecting previously unselected package libx11-xcb1:amd64. Preparing to unpack .../24-libx11-xcb1_2%3a1.8.7-1+b1_amd64.deb ... Unpacking libx11-xcb1:amd64 (2:1.8.7-1+b1) ... Selecting previously unselected package libxcb-dri2-0:amd64. Preparing to unpack .../25-libxcb-dri2-0_1.17.0-2_amd64.deb ... Unpacking libxcb-dri2-0:amd64 (1.17.0-2) ... Selecting previously unselected package libxcb-dri3-0:amd64. Preparing to unpack .../26-libxcb-dri3-0_1.17.0-2_amd64.deb ... Unpacking libxcb-dri3-0:amd64 (1.17.0-2) ... Selecting previously unselected package libxcb-present0:amd64. Preparing to unpack .../27-libxcb-present0_1.17.0-2_amd64.deb ... Unpacking libxcb-present0:amd64 (1.17.0-2) ... Selecting previously unselected package libxcb-sync1:amd64. Preparing to unpack .../28-libxcb-sync1_1.17.0-2_amd64.deb ... Unpacking libxcb-sync1:amd64 (1.17.0-2) ... Selecting previously unselected package libxcb-xfixes0:amd64. Preparing to unpack .../29-libxcb-xfixes0_1.17.0-2_amd64.deb ... Unpacking libxcb-xfixes0:amd64 (1.17.0-2) ... Selecting previously unselected package libxshmfence1:amd64. Preparing to unpack .../30-libxshmfence1_1.3-1+b1_amd64.deb ... Unpacking libxshmfence1:amd64 (1.3-1+b1) ... Selecting previously unselected package mesa-libgallium:amd64. Preparing to unpack .../31-mesa-libgallium_24.2.4-1_amd64.deb ... Unpacking mesa-libgallium:amd64 (24.2.4-1) ... Selecting previously unselected package libgbm1:amd64. Preparing to unpack .../32-libgbm1_24.2.4-1_amd64.deb ... Unpacking libgbm1:amd64 (24.2.4-1) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../33-libgfortran5_14.2.0-6_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-6) ... Selecting previously unselected package libglvnd0:amd64. Preparing to unpack .../34-libglvnd0_1.7.0-1+b1_amd64.deb ... Unpacking libglvnd0:amd64 (1.7.0-1+b1) ... Selecting previously unselected package libxcb-glx0:amd64. Preparing to unpack .../35-libxcb-glx0_1.17.0-2_amd64.deb ... Unpacking libxcb-glx0:amd64 (1.17.0-2) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../36-libxcb-shm0_1.17.0-2_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.17.0-2) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../37-libxext6_2%3a1.3.4-1+b2_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b2) ... Selecting previously unselected package libxfixes3:amd64. Preparing to unpack .../38-libxfixes3_1%3a6.0.0-2+b1_amd64.deb ... Unpacking libxfixes3:amd64 (1:6.0.0-2+b1) ... Selecting previously unselected package libxxf86vm1:amd64. Preparing to unpack .../39-libxxf86vm1_1%3a1.1.4-1+b3_amd64.deb ... Unpacking libxxf86vm1:amd64 (1:1.1.4-1+b3) ... Selecting previously unselected package libvulkan1:amd64. Preparing to unpack .../40-libvulkan1_1.3.296.0-1_amd64.deb ... Unpacking libvulkan1:amd64 (1.3.296.0-1) ... Selecting previously unselected package libgl1-mesa-dri:amd64. Preparing to unpack .../41-libgl1-mesa-dri_24.2.4-1_amd64.deb ... Unpacking libgl1-mesa-dri:amd64 (24.2.4-1) ... Selecting previously unselected package libglx-mesa0:amd64. Preparing to unpack .../42-libglx-mesa0_24.2.4-1_amd64.deb ... Unpacking libglx-mesa0:amd64 (24.2.4-1) ... Selecting previously unselected package libglx0:amd64. Preparing to unpack .../43-libglx0_1.7.0-1+b1_amd64.deb ... Unpacking libglx0:amd64 (1.7.0-1+b1) ... Selecting previously unselected package libgl1:amd64. Preparing to unpack .../44-libgl1_1.7.0-1+b1_amd64.deb ... Unpacking libgl1:amd64 (1.7.0-1+b1) ... Selecting previously unselected package libopengl0:amd64. Preparing to unpack .../45-libopengl0_1.7.0-1+b1_amd64.deb ... Unpacking libopengl0:amd64 (1.7.0-1+b1) ... Selecting previously unselected package libglu1-mesa:amd64. Preparing to unpack .../46-libglu1-mesa_9.0.2-1.1+b1_amd64.deb ... Unpacking libglu1-mesa:amd64 (9.0.2-1.1+b1) ... Selecting previously unselected package libxi6:amd64. Preparing to unpack .../47-libxi6_2%3a1.8.2-1_amd64.deb ... Unpacking libxi6:amd64 (2:1.8.2-1) ... Selecting previously unselected package libglut3.12:amd64. Preparing to unpack .../48-libglut3.12_3.4.0-1+b2_amd64.deb ... Unpacking libglut3.12:amd64 (3.4.0-1+b2) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../49-liblapack3_3.12.0-3_amd64.deb ... Unpacking liblapack3:amd64 (3.12.0-3) ... Selecting previously unselected package libopenmm8.1. Preparing to unpack .../50-libopenmm8.1_8.1.2+dfsg-1_amd64.deb ... Unpacking libopenmm8.1 (8.1.2+dfsg-1) ... Selecting previously unselected package libsimbody3.7:amd64. Preparing to unpack .../51-libsimbody3.7_3.7+dfsg-3+b1_amd64.deb ... Unpacking libsimbody3.7:amd64 (3.7+dfsg-3+b1) ... Selecting previously unselected package libsimtkmolmodel3.1t64:amd64. Preparing to unpack .../52-libsimtkmolmodel3.1t64_3.1.0-4.1+b2_amd64.deb ... Unpacking libsimtkmolmodel3.1t64:amd64 (3.1.0-4.1+b2) ... Selecting previously unselected package libsimtkmolmodel-plugins. Preparing to unpack .../53-libsimtkmolmodel-plugins_3.1.0-4.1+b2_amd64.deb ... Unpacking libsimtkmolmodel-plugins (3.1.0-4.1+b2) ... Setting up libexpat1:amd64 (2.6.3-1) ... Setting up libwayland-server0:amd64 (1.23.0-1) ... Setting up libpciaccess0:amd64 (0.17-3+b1) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up libxcb1:amd64 (1.17.0-2) ... Setting up libicu72:amd64 (72.1-5) ... Setting up libxcb-xfixes0:amd64 (1.17.0-2) ... Setting up libglvnd0:amd64 (1.7.0-1+b1) ... Setting up libxcb-glx0:amd64 (1.17.0-2) ... Setting up libedit2:amd64 (3.1-20240808-1) ... Setting up libsensors-config (1:3.6.0-10) ... Setting up libxcb-shm0:amd64 (1.17.0-2) ... Setting up libopengl0:amd64 (1.7.0-1+b1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up libxcb-present0:amd64 (1.17.0-2) ... Setting up libz3-4:amd64 (4.8.12-3.1+b2) ... Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libx11-data (2:1.8.7-1) ... Setting up libxcb-sync1:amd64 (1.17.0-2) ... Setting up libsensors5:amd64 (1:3.6.0-10) ... Setting up libglapi-mesa:amd64 (24.2.4-1) ... Setting up libgfortran5:amd64 (14.2.0-6) ... Setting up libvulkan1:amd64 (1.3.296.0-1) ... Setting up libxcb-dri2-0:amd64 (1.17.0-2) ... Setting up libxshmfence1:amd64 (1.3-1+b1) ... Setting up libxcb-randr0:amd64 (1.17.0-2) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1+b1) ... Setting up libopenmm8.1 (8.1.2+dfsg-1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2) ... Setting up libllvm19:amd64 (1:19.1.2-1) ... Setting up libx11-xcb1:amd64 (2:1.8.7-1+b1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b3) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libxi6:amd64 (2:1.8.2-1) ... Setting up libdrm-radeon1:amd64 (2.4.123-1) ... Setting up libdrm-intel1:amd64 (2.4.123-1) ... Setting up mesa-libgallium:amd64 (24.2.4-1) ... Setting up libgbm1:amd64 (24.2.4-1) ... Setting up libgl1-mesa-dri:amd64 (24.2.4-1) ... Setting up libglx-mesa0:amd64 (24.2.4-1) ... Setting up libglx0:amd64 (1.7.0-1+b1) ... Setting up libgl1:amd64 (1.7.0-1+b1) ... Setting up libglut3.12:amd64 (3.4.0-1+b2) ... Setting up libsimbody3.7:amd64 (3.7+dfsg-3+b1) ... Setting up libsimtkmolmodel3.1t64:amd64 (3.1.0-4.1+b2) ... Setting up libsimtkmolmodel-plugins (3.1.0-4.1+b2) ... Processing triggers for libc-bin (2.40-3) ... 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-y', 'install', 'libsimtkmolmodel-plugins'] 0m8.5s INFO: Running scripts post_install 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_install_exceptions'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_install_exceptions'] 0m8.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m8.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m8.7s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmppsme1ig_ to sid 0m8.7s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m8.7s INFO: Running scripts pre_distupgrade 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_exceptions'] 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_exceptions'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', 'update'] 0m10.9s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [202 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.0 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7332 kB] Fetched 17.6 MB in 2s (10.5 MB/s) Reading package lists... 0m10.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', 'update'] 0m10.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-yf', 'dist-upgrade'] 0m14.6s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: coreutils gcc-14-base gpgv libaudit-common libaudit1 libblas3 libcap2 libexpat1 libgcc-s1 libgfortran5 libgl1 libglu1-mesa libglvnd0 libglx0 libgmp10 libgnutls30t64 libhogweed6t64 libicu72 libidn2-0 liblapack3 libllvm19 liblz4-1 liblzma5 libmd0 libnettle8t64 libopengl0 libp11-kit0 libpam-modules libpam-modules-bin libpam0g libpciaccess0 libpcre2-8-0 libseccomp2 libsensors5 libsimtkmolmodel-plugins libsimtkmolmodel3.1t64 libssl3t64 libstdc++6 libtasn1-6 libtinfo6 libunistring5 libwayland-server0 libx11-6 libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxfixes3 libxshmfence1 libxxhash0 libz3-4 libzstd1 ncurses-bin openssl-provider-legacy tzdata zlib1g 64 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 62.9 MB of archives. After this operation, 1298 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 coreutils amd64 9.5-1+b1 [2922 kB] Get:2 http://deb.debian.org/debian sid/main amd64 ncurses-bin amd64 6.5-2+b1 [434 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libaudit-common all 1:4.0.1-1 [12.3 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libaudit1 amd64 1:4.0.1-1 [54.5 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libpam0g amd64 1.5.3-7+b1 [68.3 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libpam-modules-bin amd64 1.5.3-7+b1 [54.1 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libpam-modules amd64 1.5.3-7+b1 [267 kB] Get:8 http://deb.debian.org/debian sid/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Get:9 http://deb.debian.org/debian sid/main amd64 gpgv amd64 2.2.45-1 [218 kB] Get:10 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-7 [46.9 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-7 [713 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14.2.0-7 [837 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-7 [72.8 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libcap2 amd64 1:2.66-5+b1 [27.8 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libgmp10 amd64 2:6.3.0+dfsg-2+b2 [560 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libnettle8t64 amd64 3.10-1+b1 [305 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libhogweed6t64 amd64 3.10-1+b1 [335 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libunistring5 amd64 1.2-1+b1 [429 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libp11-kit0 amd64 0.25.5-2+b1 [429 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libgnutls30t64 amd64 3.8.6-2+b1 [1446 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libxxhash0 amd64 0.8.2-2+b2 [26.6 kB] Get:24 http://deb.debian.org/debian sid/main amd64 liblz4-1 amd64 1.9.4-3+b1 [60.3 kB] Get:25 http://deb.debian.org/debian sid/main amd64 liblzma5 amd64 5.6.3-1+b1 [272 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libpcre2-8-0 amd64 10.42-4+b2 [266 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libseccomp2 amd64 2.5.5-1+b2 [47.4 kB] Get:29 http://deb.debian.org/debian sid/main amd64 openssl-provider-legacy amd64 3.3.2-2 [298 kB] Get:30 http://deb.debian.org/debian sid/main amd64 libzstd1 amd64 1.5.6+dfsg-1+b1 [300 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libssl3t64 amd64 3.3.2-2 [2271 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libtinfo6 amd64 6.5-2+b1 [344 kB] Get:33 http://deb.debian.org/debian sid/main amd64 tzdata all 2024b-3 [255 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.12.0-3+b1 [152 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libexpat1 amd64 2.6.3-2 [105 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libopengl0 amd64 1.7.0-1+b2 [30.9 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libx11-6 amd64 2:1.8.7-1+b2 [804 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libx11-xcb1 amd64 2:1.8.7-1+b2 [232 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libxau6 amd64 1:1.0.9-1+b2 [18.2 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libxdmcp6 amd64 1:1.1.2-3+b2 [24.4 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Get:44 http://deb.debian.org/debian sid/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Get:45 http://deb.debian.org/debian sid/main amd64 libglu1-mesa amd64 9.0.2-1.1+b2 [185 kB] Get:46 http://deb.debian.org/debian sid/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get:47 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.12.0-3+b1 [2450 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libz3-4 amd64 4.8.12-3.1+b3 [7772 kB] Get:49 http://deb.debian.org/debian sid/main amd64 libllvm19 amd64 1:19.1.2-2 [26.0 MB] Get:50 http://deb.debian.org/debian sid/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get:51 http://deb.debian.org/debian sid/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB] Get:52 http://deb.debian.org/debian sid/main amd64 libsimtkmolmodel3.1t64 amd64 3.1.0-4.1+b3 [667 kB] Get:53 http://deb.debian.org/debian sid/main amd64 libsimtkmolmodel-plugins amd64 3.1.0-4.1+b3 [19.6 kB] Get:54 http://deb.debian.org/debian sid/main amd64 libwayland-server0 amd64 1.23.0-1+b1 [34.2 kB] Get:55 http://deb.debian.org/debian sid/main amd64 libxcb-dri2-0 amd64 1.17.0-2+b1 [107 kB] Get:56 http://deb.debian.org/debian sid/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Get:57 http://deb.debian.org/debian sid/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Get:58 http://deb.debian.org/debian sid/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Get:59 http://deb.debian.org/debian sid/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Get:60 http://deb.debian.org/debian sid/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get:61 http://deb.debian.org/debian sid/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Get:62 http://deb.debian.org/debian sid/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Get:63 http://deb.debian.org/debian sid/main amd64 libxfixes3 amd64 1:6.0.0-2+b2 [20.3 kB] Get:64 http://deb.debian.org/debian sid/main amd64 libxshmfence1 amd64 1.3-1+b2 [8848 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 62.9 MB in 1s (110 MB/s) (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5831 files and directories currently installed.) Preparing to unpack .../libzstd1_1.5.6+dfsg-1+b1_amd64.deb ... Unpacking libzstd1:amd64 (1.5.6+dfsg-1+b1) over (1.5.6+dfsg-1) ... Setting up libzstd1:amd64 (1.5.6+dfsg-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5832 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.3.2-2_amd64.deb ... Unpacking libssl3t64:amd64 (3.3.2-2) over (3.3.2-1) ... Setting up libssl3t64:amd64 (3.3.2-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5832 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.5-2+b1_amd64.deb ... Unpacking libtinfo6:amd64 (6.5-2+b1) over (6.5-2) ... Setting up libtinfo6:amd64 (6.5-2+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5833 files and directories currently installed.) Preparing to unpack .../00-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) over (2024a-4) ... Preparing to unpack .../01-libblas3_3.12.0-3+b1_amd64.deb ... Unpacking libblas3:amd64 (3.12.0-3+b1) over (3.12.0-3) ... Preparing to unpack .../02-libexpat1_2.6.3-2_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-2) over (2.6.3-1) ... Preparing to unpack .../03-libopengl0_1.7.0-1+b2_amd64.deb ... Unpacking libopengl0:amd64 (1.7.0-1+b2) over (1.7.0-1+b1) ... Preparing to unpack .../04-libx11-6_2%3a1.8.7-1+b2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.7-1+b2) over (2:1.8.7-1+b1) ... Preparing to unpack .../05-libx11-xcb1_2%3a1.8.7-1+b2_amd64.deb ... Unpacking libx11-xcb1:amd64 (2:1.8.7-1+b2) over (2:1.8.7-1+b1) ... Preparing to unpack .../06-libxau6_1%3a1.0.9-1+b2_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1+b2) over (1:1.0.9-1+b1) ... Preparing to unpack .../07-libxdmcp6_1%3a1.1.2-3+b2_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3+b2) over (1:1.1.2-3+b1) ... Preparing to unpack .../08-libxcb1_1.17.0-2+b1_amd64.deb ... Unpacking libxcb1:amd64 (1.17.0-2+b1) over (1.17.0-2) ... Preparing to unpack .../09-libgl1_1.7.0-1+b2_amd64.deb ... Unpacking libgl1:amd64 (1.7.0-1+b2) over (1.7.0-1+b1) ... Preparing to unpack .../10-libglx0_1.7.0-1+b2_amd64.deb ... Unpacking libglx0:amd64 (1.7.0-1+b2) over (1.7.0-1+b1) ... Preparing to unpack .../11-libglvnd0_1.7.0-1+b2_amd64.deb ... Unpacking libglvnd0:amd64 (1.7.0-1+b2) over (1.7.0-1+b1) ... Preparing to unpack .../12-libglu1-mesa_9.0.2-1.1+b2_amd64.deb ... Unpacking libglu1-mesa:amd64 (9.0.2-1.1+b2) over (9.0.2-1.1+b1) ... Preparing to unpack .../13-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) over (72.1-5) ... Preparing to unpack .../14-liblapack3_3.12.0-3+b1_amd64.deb ... Unpacking liblapack3:amd64 (3.12.0-3+b1) over (3.12.0-3) ... Preparing to unpack .../15-libz3-4_4.8.12-3.1+b3_amd64.deb ... Unpacking libz3-4:amd64 (4.8.12-3.1+b3) over (4.8.12-3.1+b2) ... Preparing to unpack .../16-libllvm19_1%3a19.1.2-2_amd64.deb ... Unpacking libllvm19:amd64 (1:19.1.2-2) over (1:19.1.2-1) ... Preparing to unpack .../17-libpciaccess0_0.17-3+b2_amd64.deb ... Unpacking libpciaccess0:amd64 (0.17-3+b2) over (0.17-3+b1) ... Preparing to unpack .../18-libsensors5_1%3a3.6.0-10+b1_amd64.deb ... Unpacking libsensors5:amd64 (1:3.6.0-10+b1) over (1:3.6.0-10) ... Preparing to unpack .../19-libsimtkmolmodel3.1t64_3.1.0-4.1+b3_amd64.deb ... Unpacking libsimtkmolmodel3.1t64:amd64 (3.1.0-4.1+b3) over (3.1.0-4.1+b2) ... Preparing to unpack .../20-libsimtkmolmodel-plugins_3.1.0-4.1+b3_amd64.deb ... Unpacking libsimtkmolmodel-plugins (3.1.0-4.1+b3) over (3.1.0-4.1+b2) ... Preparing to unpack .../21-libwayland-server0_1.23.0-1+b1_amd64.deb ... Unpacking libwayland-server0:amd64 (1.23.0-1+b1) over (1.23.0-1) ... Preparing to unpack .../22-libxcb-dri2-0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-dri2-0:amd64 (1.17.0-2+b1) over (1.17.0-2) ... Preparing to unpack .../23-libxcb-dri3-0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-dri3-0:amd64 (1.17.0-2+b1) over (1.17.0-2) ... Preparing to unpack .../24-libxcb-glx0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-glx0:amd64 (1.17.0-2+b1) over (1.17.0-2) ... Preparing to unpack .../25-libxcb-present0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-present0:amd64 (1.17.0-2+b1) over (1.17.0-2) ... Preparing to unpack .../26-libxcb-randr0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-randr0:amd64 (1.17.0-2+b1) over (1.17.0-2) ... Preparing to unpack .../27-libxcb-shm0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.17.0-2+b1) over (1.17.0-2) ... Preparing to unpack .../28-libxcb-sync1_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-sync1:amd64 (1.17.0-2+b1) over (1.17.0-2) ... Preparing to unpack .../29-libxcb-xfixes0_1.17.0-2+b1_amd64.deb ... Unpacking libxcb-xfixes0:amd64 (1.17.0-2+b1) over (1.17.0-2) ... Preparing to unpack .../30-libxfixes3_1%3a6.0.0-2+b2_amd64.deb ... Unpacking libxfixes3:amd64 (1:6.0.0-2+b2) over (1:6.0.0-2+b1) ... Preparing to unpack .../31-libxshmfence1_1.3-1+b2_amd64.deb ... Unpacking libxshmfence1:amd64 (1.3-1+b2) over (1.3-1+b1) ... Setting up libexpat1:amd64 (2.6.3-2) ... Setting up libwayland-server0:amd64 (1.23.0-1+b1) ... Setting up libpciaccess0:amd64 (0.17-3+b2) ... Setting up libxau6:amd64 (1:1.0.9-1+b2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b2) ... Setting up libxcb1:amd64 (1.17.0-2+b1) ... Setting up libicu72:amd64 (72.1-5+b1) ... Setting up libxcb-xfixes0:amd64 (1.17.0-2+b1) ... Setting up libglvnd0:amd64 (1.7.0-1+b2) ... Setting up libxcb-glx0:amd64 (1.17.0-2+b1) ... Setting up libxcb-shm0:amd64 (1.17.0-2+b1) ... Setting up libsimtkmolmodel3.1t64:amd64 (3.1.0-4.1+b3) ... Setting up libopengl0:amd64 (1.7.0-1+b2) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Oct 30 05:43:51 UTC 2024. Universal Time is now: Wed Oct 30 05:43:51 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:amd64 (1.17.0-2+b1) ... Setting up libz3-4:amd64 (4.8.12-3.1+b3) ... Setting up libblas3:amd64 (3.12.0-3+b1) ... Setting up libxcb-sync1:amd64 (1.17.0-2+b1) ... Setting up libsensors5:amd64 (1:3.6.0-10+b1) ... Setting up libgfortran5:amd64 (14.2.0-7) ... Setting up libxcb-dri2-0:amd64 (1.17.0-2+b1) ... Setting up libxshmfence1:amd64 (1.3-1+b2) ... Setting up libxcb-randr0:amd64 (1.17.0-2+b1) ... Setting up libx11-6:amd64 (2:1.8.7-1+b2) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1+b2) ... Setting up libsimtkmolmodel-plugins (3.1.0-4.1+b3) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2+b1) ... Setting up libllvm19:amd64 (1:19.1.2-2) ... Setting up libx11-xcb1:amd64 (2:1.8.7-1+b2) ... Setting up liblapack3:amd64 (3.12.0-3+b1) ... Setting up libglx0:amd64 (1.7.0-1+b2) ... Setting up libgl1:amd64 (1.7.0-1+b2) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b2) ... Processing triggers for libc-bin (2.40-3) ... 0m14.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-yf', 'dist-upgrade'] 0m14.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m14.8s DUMP: cda3f16ee835e74ad9ae552ededb5254 - 0m14.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m14.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'show', '--no-all-versions', 'libsimtkmolmodel-plugins'] 0m14.9s DUMP: Package: libsimtkmolmodel-plugins Source: molmodel (3.1.0-4.1) Version: 3.1.0-4.1+b3 Installed-Size: 61 Maintainer: Debichem Team Architecture: amd64 Depends: libc6 (>= 2.14), libgcc-s1 (>= 3.0), libopenmm8.1 (>= 8.1.2+dfsg), libsimbody3.7 (>= 3.7+dfsg), libsimtkmolmodel3.1t64 (>= 3.1.0), libstdc++6 (>= 13.1) Description-en: Plugins for C++ API for creating molecular models for SimTK Provides C++ API for creating molecular models whose dynamics can be simulated using the SimTK Simbody library. Molmodel is a programmer's toolkit for building reduced-coordinate, yet still all-atom, models of large biopolymers such as proteins, RNA, and DNA. One can control the allowed mobility. By default, Molmodel builds torsion-coordinate models in which bond stretch and bend angles are rigid while bond torsion angles are mobile. But one is able to rigidify or free any subsets of the atoms, such as the rigid benzene ring. . Molmodel is a C++ API for biochemist-friendly molecular modeling that extends the Simbody API to simplify construction of high-performance articulated models of molecules. . This package provides Molmodel plugins. Description-md5: 303ea0d38f55e1e6c188aa1f6286799c Homepage: https://simtk.org/projects/molmodel Tag: role::shared-lib Section: libs Priority: optional Filename: pool/main/m/molmodel/libsimtkmolmodel-plugins_3.1.0-4.1+b3_amd64.deb Size: 19576 MD5sum: 545fe04093c3e9ba5e54ffa7c20cafd6 SHA256: d45d004e455c7af7055d5a340a3a9560607d6af66006a27369f31389781c0207 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'show', '--no-all-versions', 'libsimtkmolmodel-plugins'] 0m14.9s INFO: apt-cache knows about the following packages: libsimtkmolmodel-plugins 0m14.9s INFO: Running scripts pre_install 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_database-server'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_database-server'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_exceptions'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_exceptions'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_extras'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_extras'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy'] 0m14.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy', 'libsimtkmolmodel-plugins'] 0m14.9s DUMP: libsimtkmolmodel-plugins: Installed: 3.1.0-4.1+b3 Candidate: 3.1.0-4.1+b3 Version table: *** 3.1.0-4.1+b3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy', 'libsimtkmolmodel-plugins'] 0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-y', 'install', 'libsimtkmolmodel-plugins'] 0m15.2s DUMP: Reading package lists... Building dependency tree... Reading state information... libsimtkmolmodel-plugins is already the newest version (3.1.0-4.1+b3). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-y', 'install', 'libsimtkmolmodel-plugins'] 0m15.2s INFO: Running scripts post_install 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_install_exceptions'] 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_install_exceptions'] 0m15.2s INFO: Running scripts post_distupgrade 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_exceptions'] 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_exceptions'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_zz_backports'] 0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_distupgrade_zz_backports'] 0m15.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m15.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m15.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m15.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m15.7s INFO: Running scripts pre_install 0m15.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_database-server'] 0m15.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_database-server'] 0m15.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_exceptions'] 0m15.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_exceptions'] 0m15.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_extras'] 0m15.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_extras'] 0m15.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture'] 0m15.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture'] 0m15.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m15.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m15.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy'] 0m15.8s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m15.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy'] 0m15.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy', 'libsimtkmolmodel-plugins'] 0m15.8s DUMP: libsimtkmolmodel-plugins: Installed: 3.1.0-4.1+b3 Candidate: 3.1.0-4.1+b3 Version table: *** 3.1.0-4.1+b3 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m15.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-cache', 'policy', 'libsimtkmolmodel-plugins'] 0m15.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-y', 'install', 'libsimtkmolmodel-plugins=3.1.0-4.1+b3'] 0m16.0s DUMP: Reading package lists... Building dependency tree... Reading state information... libsimtkmolmodel-plugins is already the newest version (3.1.0-4.1+b3). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m16.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', '-y', 'install', 'libsimtkmolmodel-plugins=3.1.0-4.1+b3'] 0m16.0s INFO: Running scripts post_install 0m16.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_install_exceptions'] 0m16.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_install_exceptions'] 0m16.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m16.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m16.5s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', '-ac', '--ignore-obsolete'] 0m17.3s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', '-ac', '--ignore-obsolete'] 0m17.3s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m17.3s DUMP: 0.15.6 0m17.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m17.3s INFO: Running adequate version 0.15.6 now. 0m17.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'libsimtkmolmodel-plugins'] 0m17.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'libsimtkmolmodel-plugins'] 0m17.4s INFO: Running scripts pre_remove 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_exceptions'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/pre_remove_exceptions'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m18.0s DUMP: install ok installed apt apt 2.9.10 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.32-1+b2 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1+b1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-7 install ok installed gpgv gpgv 2.2.45-1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.10 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.0.1-1 install ok installed libblas3:amd64 libblas3 3.12.0-3+b1 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-3 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272+b1 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.123-1 install ok installed libdrm-common libdrm-common 2.4.123-1 install ok installed libdrm-intel1:amd64 libdrm-intel1 2.4.123-1 install ok installed libdrm-radeon1:amd64 libdrm-radeon1 2.4.123-1 install ok installed libdrm2:amd64 libdrm2 2.4.123-1 install ok installed libedit2:amd64 libedit2 3.1-20240808-1 install ok installed libelf1t64:amd64 libelf1t64 0.192-4 install ok installed libexpat1:amd64 libexpat1 2.6.3-2 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgbm1:amd64 libgbm1 24.2.4-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-7 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgfortran5:amd64 libgfortran5 14.2.0-7 install ok installed libgl1:amd64 libgl1 1.7.0-1+b2 install ok installed libgl1-mesa-dri:amd64 libgl1-mesa-dri 24.2.4-1 install ok installed libglapi-mesa:amd64 libglapi-mesa 24.2.4-1 install ok installed libglu1-mesa:amd64 libglu1-mesa 9.0.2-1.1+b2 install ok installed libglut3.12:amd64 libglut3.12 3.4.0-1+b2 install ok installed libglvnd0:amd64 libglvnd0 1.7.0-1+b2 install ok installed libglx-mesa0:amd64 libglx-mesa0 24.2.4-1 install ok installed libglx0:amd64 libglx0 1.7.0-1+b2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b2 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2+b1 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libicu72:amd64 libicu72 72.1-5+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed liblapack3:amd64 liblapack3 3.12.0-3+b1 install ok installed libllvm19:amd64 libllvm19 1:19.1.2-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libopengl0:amd64 libopengl0 1.7.0-1+b2 install ok installed libopenmm8.1 libopenmm8.1 8.1.2+dfsg-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2+b1 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpciaccess0:amd64 libpciaccess0 0.17-3+b2 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b2 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b2 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsensors-config libsensors-config 1:3.6.0-10 install ok installed libsensors5:amd64 libsensors5 1:3.6.0-10+b1 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsimbody3.7:amd64 libsimbody3.7 3.7+dfsg-3+b1 install ok installed libsimtkmolmodel-plugins libsimtkmolmodel-plugins 3.1.0-4.1+b3 install ok installed libsimtkmolmodel3.1t64:amd64 libsimtkmolmodel3.1t64 3.1.0-4.1+b3 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libss2:amd64 libss2 1.47.1-1+b1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-7 install ok installed libsystemd0:amd64 libsystemd0 256.7-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libudev1:amd64 libudev1 256.7-2 install ok installed libunistring5:amd64 libunistring5 1.2-1+b1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libvulkan1:amd64 libvulkan1 1.3.296.0-1 install ok installed libwayland-server0:amd64 libwayland-server0 1.23.0-1+b1 install ok installed libx11-6:amd64 libx11-6 2:1.8.7-1+b2 install ok installed libx11-data libx11-data 2:1.8.7-1 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.8.7-1+b2 install ok installed libxau6:amd64 libxau6 1:1.0.9-1+b2 install ok installed libxcb-dri2-0:amd64 libxcb-dri2-0 1.17.0-2+b1 install ok installed libxcb-dri3-0:amd64 libxcb-dri3-0 1.17.0-2+b1 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.17.0-2+b1 install ok installed libxcb-present0:amd64 libxcb-present0 1.17.0-2+b1 install ok installed libxcb-randr0:amd64 libxcb-randr0 1.17.0-2+b1 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.17.0-2+b1 install ok installed libxcb-sync1:amd64 libxcb-sync1 1.17.0-2+b1 install ok installed libxcb-xfixes0:amd64 libxcb-xfixes0 1.17.0-2+b1 install ok installed libxcb1:amd64 libxcb1 1.17.0-2+b1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3+b2 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b2 install ok installed libxfixes3:amd64 libxfixes3 1:6.0.0-2+b2 install ok installed libxi6:amd64 libxi6 2:1.8.2-1 install ok installed libxml2:amd64 libxml2 2.12.7+dfsg+really2.9.14-0.1 install ok installed libxshmfence1:amd64 libxshmfence1 1.3-1+b2 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.4-1+b3 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libz3-4:amd64 libz3-4 4.8.12-3.1+b3 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1+b1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mesa-libgallium:amd64 mesa-libgallium 24.2.4-1 install ok installed mount mount 2.40.2-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.40.0-6 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-3 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', 'remove', 'libblas3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libgbm1:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglu1-mesa:amd64', 'libglut3.12:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libicu72:amd64', 'liblapack3:amd64', 'libllvm19:amd64', 'libopengl0:amd64', 'libopenmm8.1', 'libpciaccess0:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsimbody3.7:amd64', 'libsimtkmolmodel3.1t64:amd64', 'libvulkan1:amd64', 'libwayland-server0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxml2:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'mesa-libgallium:amd64', 'libsimtkmolmodel-plugins'] 0m18.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libblas3 libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libedit2 libelf1t64 libexpat1 libgbm1 libgfortran5 libgl1 libgl1-mesa-dri libglapi-mesa libglu1-mesa libglut3.12 libglvnd0 libglx-mesa0 libglx0 libicu72 liblapack3 libllvm19 libopengl0 libopenmm8.1 libpciaccess0 libsensors-config libsensors5 libsimbody3.7 libsimtkmolmodel-plugins libsimtkmolmodel3.1t64 libvulkan1 libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxdmcp6 libxext6 libxfixes3 libxi6 libxml2 libxshmfence1 libxxf86vm1 libz3-4 mesa-libgallium 0 upgraded, 0 newly installed, 54 to remove and 0 not upgraded. After this operation, 280 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5835 files and directories currently installed.) Removing libsimtkmolmodel-plugins (3.1.0-4.1+b3) ... Removing libsimtkmolmodel3.1t64:amd64 (3.1.0-4.1+b3) ... Removing libsimbody3.7:amd64 (3.7+dfsg-3+b1) ... Removing liblapack3:amd64 (3.12.0-3+b1) ... Removing libblas3:amd64 (3.12.0-3+b1) ... Removing libglut3.12:amd64 (3.4.0-1+b2) ... Removing libgl1:amd64 (1.7.0-1+b2) ... Removing libglx0:amd64 (1.7.0-1+b2) ... Removing libglx-mesa0:amd64 (24.2.4-1) ... Removing libgl1-mesa-dri:amd64 (24.2.4-1) ... Removing libgbm1:amd64 (24.2.4-1) ... Removing mesa-libgallium:amd64 (24.2.4-1) ... Removing libdrm-amdgpu1:amd64 (2.4.123-1) ... Removing libdrm-radeon1:amd64 (2.4.123-1) ... Removing libdrm-intel1:amd64 (2.4.123-1) ... Removing libllvm19:amd64 (1:19.1.2-2) ... Removing libedit2:amd64 (3.1-20240808-1) ... Removing libelf1t64:amd64 (0.192-4) ... Removing libexpat1:amd64 (2.6.3-2) ... Removing libgfortran5:amd64 (14.2.0-7) ... Removing libglapi-mesa:amd64 (24.2.4-1) ... Removing libglu1-mesa:amd64 (9.0.2-1.1+b2) ... Removing libopengl0:amd64 (1.7.0-1+b2) ... Removing libglvnd0:amd64 (1.7.0-1+b2) ... Removing libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Removing libicu72:amd64 (72.1-5+b1) ... Removing libopenmm8.1 (8.1.2+dfsg-1) ... Removing libpciaccess0:amd64 (0.17-3+b2) ... Removing libsensors5:amd64 (1:3.6.0-10+b1) ... Removing libsensors-config (1:3.6.0-10) ... Removing libvulkan1:amd64 (1.3.296.0-1) ... Removing libwayland-server0:amd64 (1.23.0-1+b1) ... Removing libxxf86vm1:amd64 (1:1.1.4-1+b3) ... Removing libxi6:amd64 (2:1.8.2-1) ... Removing libx11-xcb1:amd64 (2:1.8.7-1+b2) ... Removing libxcb-xfixes0:amd64 (1.17.0-2+b1) ... Removing libxcb-sync1:amd64 (1.17.0-2+b1) ... Removing libxcb-dri2-0:amd64 (1.17.0-2+b1) ... Removing libxcb-dri3-0:amd64 (1.17.0-2+b1) ... Removing libxcb-glx0:amd64 (1.17.0-2+b1) ... Removing libxcb-present0:amd64 (1.17.0-2+b1) ... Removing libxcb-randr0:amd64 (1.17.0-2+b1) ... Removing libxcb-shm0:amd64 (1.17.0-2+b1) ... Removing libxext6:amd64 (2:1.3.4-1+b2) ... Removing libxfixes3:amd64 (1:6.0.0-2+b2) ... Removing libxshmfence1:amd64 (1.3-1+b2) ... Removing libz3-4:amd64 (4.8.12-3.1+b3) ... Removing libdrm2:amd64 (2.4.123-1) ... Removing libdrm-common (2.4.123-1) ... Removing libx11-6:amd64 (2:1.8.7-1+b2) ... Removing libx11-data (2:1.8.7-1) ... Removing libxcb1:amd64 (1.17.0-2+b1) ... Removing libxau6:amd64 (1:1.0.9-1+b2) ... Removing libxdmcp6:amd64 (1:1.1.2-3+b2) ... Processing triggers for libc-bin (2.40-3) ... 0m18.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', 'remove', 'libblas3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libgbm1:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglu1-mesa:amd64', 'libglut3.12:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libicu72:amd64', 'liblapack3:amd64', 'libllvm19:amd64', 'libopengl0:amd64', 'libopenmm8.1', 'libpciaccess0:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsimbody3.7:amd64', 'libsimtkmolmodel3.1t64:amd64', 'libvulkan1:amd64', 'libwayland-server0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxml2:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'mesa-libgallium:amd64', 'libsimtkmolmodel-plugins'] 0m18.6s INFO: Running scripts post_remove 0m18.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_remove_exceptions'] 0m18.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_remove_exceptions'] 0m18.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg', '--purge', 'libblas3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libgbm1:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglu1-mesa:amd64', 'libglut3.12:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libicu72:amd64', 'liblapack3:amd64', 'libllvm19:amd64', 'libopengl0:amd64', 'libopenmm8.1', 'libpciaccess0:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsimbody3.7:amd64', 'libsimtkmolmodel3.1t64:amd64', 'libvulkan1:amd64', 'libwayland-server0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxml2:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'mesa-libgallium:amd64'] 0m18.6s DUMP: dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which isn't installed dpkg: warning: ignoring request to remove libdrm-common which isn't installed dpkg: warning: ignoring request to remove libdrm-intel1 which isn't installed dpkg: warning: ignoring request to remove libdrm-radeon1 which isn't installed dpkg: warning: ignoring request to remove libdrm2 which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libelf1t64 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libgbm1 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove libgl1 which isn't installed (Reading database ... 5161 files and directories currently installed.) Purging configuration files for libgl1-mesa-dri:amd64 (24.2.4-1) ... dpkg: warning: ignoring request to remove libglapi-mesa which isn't installed dpkg: warning: ignoring request to remove libglu1-mesa which isn't installed dpkg: warning: ignoring request to remove libglut3.12 which isn't installed dpkg: warning: ignoring request to remove libglvnd0 which isn't installed dpkg: warning: ignoring request to remove libglx-mesa0 which isn't installed dpkg: warning: ignoring request to remove libglx0 which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libllvm19 which isn't installed dpkg: warning: ignoring request to remove libopengl0 which isn't installed dpkg: warning: ignoring request to remove libopenmm8.1 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed Purging configuration files for libsensors-config (1:3.6.0-10) ... dpkg: warning: ignoring request to remove libsensors5 which isn't installed dpkg: warning: ignoring request to remove libsimbody3.7 which isn't installed dpkg: warning: ignoring request to remove libsimtkmolmodel3.1t64 which isn't installed dpkg: warning: ignoring request to remove libvulkan1 which isn't installed dpkg: warning: ignoring request to remove libwayland-server0 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libx11-xcb1 which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri2-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri3-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-glx0 which isn't installed dpkg: warning: ignoring request to remove libxcb-present0 which isn't installed dpkg: warning: ignoring request to remove libxcb-randr0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb-sync1 which isn't installed dpkg: warning: ignoring request to remove libxcb-xfixes0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxfixes3 which isn't installed dpkg: warning: ignoring request to remove libxi6 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxshmfence1 which isn't installed dpkg: warning: ignoring request to remove libxxf86vm1 which isn't installed dpkg: warning: ignoring request to remove libz3-4 which isn't installed dpkg: warning: ignoring request to remove mesa-libgallium which isn't installed 0m18.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg', '--purge', 'libblas3:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1t64:amd64', 'libexpat1:amd64', 'libgbm1:amd64', 'libgfortran5:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libglu1-mesa:amd64', 'libglut3.12:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libicu72:amd64', 'liblapack3:amd64', 'libllvm19:amd64', 'libopengl0:amd64', 'libopenmm8.1', 'libpciaccess0:amd64', 'libsensors-config', 'libsensors5:amd64', 'libsimbody3.7:amd64', 'libsimtkmolmodel3.1t64:amd64', 'libvulkan1:amd64', 'libwayland-server0:amd64', 'libx11-6:amd64', 'libx11-data', 'libx11-xcb1:amd64', 'libxau6:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxi6:amd64', 'libxml2:amd64', 'libxshmfence1:amd64', 'libxxf86vm1:amd64', 'libz3-4:amd64', 'mesa-libgallium:amd64'] 0m18.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg', '--purge', 'libsimtkmolmodel-plugins'] 0m18.6s DUMP: dpkg: warning: ignoring request to remove libsimtkmolmodel-plugins which isn't installed 0m18.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg', '--purge', 'libsimtkmolmodel-plugins'] 0m18.6s INFO: Running scripts post_purge 0m18.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_purge_exceptions'] 0m18.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_purge_exceptions'] 0m18.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg', '--purge', '--pending'] 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg', '--purge', '--pending'] 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg', '--remove', '--pending'] 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg', '--remove', '--pending'] 0m18.7s INFO: Running scripts post_test 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_test_exceptions'] 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'tmp/scripts/post_test_exceptions'] 0m18.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m18.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m18.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg-divert', '--list'] 0m18.9s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m18.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'dpkg-divert', '--list'] 0m18.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', 'clean'] 0m18.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmppsme1ig_', 'apt-get', 'clean'] 0m18.9s DEBUG: Recording chroot state 0m19.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/shm'] 0m19.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/shm'] 0m19.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/console'] 0m19.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/console'] 0m19.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/ptmx'] 0m19.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/ptmx'] 0m19.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/pts'] 0m19.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/dev/pts'] 0m19.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/proc'] 0m19.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmppsme1ig_/proc'] 0m19.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m19.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmppsme1ig_'] 0m19.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmppsme1ig_ 0m19.7s INFO: PASS: Upgrading between Debian distributions. 0m19.7s INFO: PASS: All tests. 0m19.7s INFO: piuparts run ends. ret=0 End: 2024-10-30 05:43:56 GMT