Start: 2020-09-09 16:14:52 GMT [testing] Package: phipack Version: 0.0.20160614-3 Installed-Size: 179 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.7), libgcc1 (>= 1:3.0), libstdc++6 (>= 4.9) Description: PHI test and other tests of recombination Homepage: http://www.maths.otago.ac.nz/~dbryant/software/phimanual.pdf Description-md5: e153aba60d07145154853c706e973d36 Section: science Priority: optional Filename: pool/main/p/phipack/phipack_0.0.20160614-3_amd64.deb Size: 50872 MD5sum: 86c9fbcdffebbfb77da2bf223dab79a8 SHA256: 56951d2a4974b7ed462d2d6f92d504eeb500b0cf0baeb2ed1af2b662ae659813 [sid] Package: phipack Version: 0.0.20160614-5 Installed-Size: 256 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 4.9) Description: PHI test and other tests of recombination Homepage: https://www.maths.otago.ac.nz/~dbryant/software/phimanual.pdf Description-md5: e153aba60d07145154853c706e973d36 Section: science Priority: optional Filename: pool/main/p/phipack/phipack_0.0.20160614-5_amd64.deb Size: 54760 MD5sum: a3958697dafe8740fa6239608294f5d3 SHA256: 852293e353e6364140495eff12aee03eca4808e296ad14a27e55c52c902f3210 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt phipack=0.0.20160614-5 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.2~202004292056~1.1.1-20-gd7155993 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt phipack=0.0.20160614-5 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.19.0-10-amd64 #1 SMP Debian 4.19.132-1 (2020-07-24) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpsie7x_du 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpsie7x_du 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz'] 0m1.8s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz'] 0m1.8s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/proc'] 0m1.8s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/proc'] 0m1.8s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/pts'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/pts'] 0m1.9s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/ptmx'] 0m1.9s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/ptmx'] 0m1.9s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/console'] 0m1.9s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/console'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/shm'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/shm'] 0m1.9s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m1.9s DEBUG: Created policy-rc.d and chmodded it. 0m1.9s DEBUG: Created resolv.conf. 0m1.9s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpsie7x_du/tmp/scripts/ 0m1.9s INFO: Running scripts post_chroot_unpack 0m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', 'update'] 0m5.2s DUMP: Get:1 http://deb.debian.org/debian bullseye InRelease [116 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 Packages [7688 kB] Get:3 http://deb.debian.org/debian bullseye/main Translation-en [5893 kB] Fetched 13.7 MB in 3s (5254 kB/s) Reading package lists... 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', 'update'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-yf', 'dist-upgrade'] 0m6.2s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: gcc-10-base libgcc-s1 libp11-kit0 libstdc++6 libsystemd0 libudev1 6 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1597 kB of archives. After this operation, 21.5 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 libsystemd0 amd64 246.4-1 [369 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 gcc-10-base amd64 10.2.0-6 [199 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 libstdc++6 amd64 10.2.0-6 [492 kB] Get:4 http://deb.debian.org/debian bullseye/main amd64 libgcc-s1 amd64 10.2.0-6 [41.4 kB] Get:5 http://deb.debian.org/debian bullseye/main amd64 libp11-kit0 amd64 0.23.21-2 [335 kB] Get:6 http://deb.debian.org/debian bullseye/main amd64 libudev1 amd64 246.4-1 [162 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1597 kB in 0s (21.5 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6524 files and directories currently installed.) Preparing to unpack .../libsystemd0_246.4-1_amd64.deb ... Unpacking libsystemd0:amd64 (246.4-1) over (246.3-1) ... Setting up libsystemd0:amd64 (246.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6524 files and directories currently installed.) Preparing to unpack .../gcc-10-base_10.2.0-6_amd64.deb ... Unpacking gcc-10-base:amd64 (10.2.0-6) over (10.2.0-5) ... Setting up gcc-10-base:amd64 (10.2.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6524 files and directories currently installed.) Preparing to unpack .../libstdc++6_10.2.0-6_amd64.deb ... Unpacking libstdc++6:amd64 (10.2.0-6) over (10.2.0-5) ... Setting up libstdc++6:amd64 (10.2.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6524 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10.2.0-6_amd64.deb ... Unpacking libgcc-s1:amd64 (10.2.0-6) over (10.2.0-5) ... Setting up libgcc-s1:amd64 (10.2.0-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6524 files and directories currently installed.) Preparing to unpack .../libp11-kit0_0.23.21-2_amd64.deb ... Unpacking libp11-kit0:amd64 (0.23.21-2) over (0.23.20-1) ... Setting up libp11-kit0:amd64 (0.23.21-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6524 files and directories currently installed.) Preparing to unpack .../libudev1_246.4-1_amd64.deb ... Unpacking libudev1:amd64 (246.4-1) over (246.3-1) ... Setting up libudev1:amd64 (246.4-1) ... Processing triggers for libc-bin (2.31-3) ... 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-yf', 'dist-upgrade'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s DUMP: cdace5d8829e332f971e2bb2ae8e7756 - 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s INFO: Running scripts post_setup 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_dummy_users'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_dummy_users'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_forbid_home'] 0m7.3s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_forbid_home'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.3s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_minimize'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_minimize'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_zz_backports'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_setup_zz_backports'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.3s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 2.1.10 install ok installed base-files base-files 11 install ok installed base-passwd base-passwd 3.5.47 install ok installed bash bash 5.0-7 install ok installed bsdutils bsdutils 1:2.36-3 install ok installed coreutils coreutils 8.30-3+b1 install ok installed dash dash 0.5.10.2-7 install ok installed debconf debconf 1.5.74 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.9.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.20.5 install ok installed e2fsprogs e2fsprogs 1.45.6-1 install ok installed findutils findutils 4.7.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.0-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-15 install ok installed gpgv gpgv 2.2.20-1 install ok installed grep grep 3.4-1 install ok installed gzip gzip 1.10-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.58 install ok installed libacl1:amd64 libacl1 2.2.53-8 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.1.10 install ok installed libattr1:amd64 libattr1 1:2.4.48-5 install ok installed libaudit-common libaudit-common 1:2.8.5-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.5-3+b1 install ok installed libblkid1:amd64 libblkid1 2.36-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-3 install ok installed libc6:amd64 libc6 2.31-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2 install ok installed libcom-err2:amd64 libcom-err2 1.45.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.17-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.6 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.253 install ok installed libext2fs2:amd64 libext2fs2 1.45.6-1 install ok installed libffi7:amd64 libffi7 3.3-4 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.6-2 install ok installed libgmp10:amd64 libgmp10 2:6.2.0+dfsg-6 install ok installed libgnutls30:amd64 libgnutls30 3.6.14-2+b1 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libhogweed6:amd64 libhogweed6 3.6-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.2-2 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+b1 install ok installed libmount1:amd64 libmount1 2.36-3 install ok installed libnettle8:amd64 libnettle8 3.6-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.21-2 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.34-7 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.4.3-1+b1 install ok installed libselinux1:amd64 libselinux1 3.1-2 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36-3 install ok installed libss2:amd64 libss2 1.45.6-1 install ok installed libstdc++6:amd64 libstdc++6 10.2.0-6 install ok installed libsystemd0:amd64 libsystemd0 246.4-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.2-1 install ok installed libudev1:amd64 libudev1 246.4-1 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36-3 install ok installed libzstd1:amd64 libzstd1 1.4.5+dfsg-4 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.45.6-1 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36-3 install ok installed ncurses-base ncurses-base 6.2-1 install ok installed ncurses-bin ncurses-bin 6.2-1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.30.3-4 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-4 install ok installed tar tar 1.30+dfsg-7 install ok installed tzdata tzdata 2020a-1 install ok installed util-linux util-linux 2.36-3 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.3s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m7.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m7.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m7.7s INFO: Running scripts is_testable 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/is_testable_uninstallable'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/is_testable_uninstallable'] 0m7.7s INFO: Running scripts pre_test 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_test_exceptions'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_test_exceptions'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_test_root_password'] 0m7.7s DUMP: New password: Retype new password: passwd: password updated successfully 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_test_root_password'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'show', '--no-all-versions', 'phipack'] 0m7.9s DUMP: Package: phipack Version: 0.0.20160614-3 Installed-Size: 179 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.7), libgcc1 (>= 1:3.0), libstdc++6 (>= 4.9) Description-en: PHI test and other tests of recombination The PhiPack software package implements a few tests for recombination and can produce refined incompatibility matrices as well. Specifically, PHIPack implements the 'Pairwise Homoplasy Index', Maximum Chi2 and the 'Neighbour Similarity Score'. The program Phi can be run to produce a p-value of recombination within a data set and the program profile can be run to determine regions exhibiting strongest evidence mosaicism. Description-md5: e153aba60d07145154853c706e973d36 Homepage: http://www.maths.otago.ac.nz/~dbryant/software/phimanual.pdf Section: science Priority: optional Filename: pool/main/p/phipack/phipack_0.0.20160614-3_amd64.deb Size: 50872 MD5sum: 86c9fbcdffebbfb77da2bf223dab79a8 SHA256: 56951d2a4974b7ed462d2d6f92d504eeb500b0cf0baeb2ed1af2b662ae659813 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'show', '--no-all-versions', 'phipack'] 0m7.9s INFO: apt-cache knows about the following packages: phipack 0m7.9s INFO: Running scripts pre_install 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_database-server'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_database-server'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_exceptions'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_exceptions'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_extras'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_extras'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy'] 0m7.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release o=Debian,a=testing,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy'] 0m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy', 'phipack'] 0m8.0s DUMP: phipack: Installed: (none) Candidate: 0.0.20160614-3 Version table: 0.0.20160614-3 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy', 'phipack'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-y', 'install', 'phipack'] 0m8.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: phipack 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 50.9 kB of archives. After this operation, 183 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 phipack amd64 0.0.20160614-3 [50.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 50.9 kB in 0s (1838 kB/s) Selecting previously unselected package phipack. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6526 files and directories currently installed.) Preparing to unpack .../phipack_0.0.20160614-3_amd64.deb ... Unpacking phipack (0.0.20160614-3) ... Setting up phipack (0.0.20160614-3) ... 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-y', 'install', 'phipack'] 0m8.6s INFO: Running scripts post_install 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_install_exceptions'] 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_install_exceptions'] 0m8.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m8.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m8.9s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpsie7x_du to sid 0m8.9s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m8.9s INFO: Running scripts pre_distupgrade 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_exceptions'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_exceptions'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', 'update'] 0m12.5s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [146 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [8371 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6305 kB] Fetched 14.8 MB in 3s (5005 kB/s) Reading package lists... 0m12.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', 'update'] 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-yf', 'dist-upgrade'] 0m14.1s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: coreutils debianutils gcc-9-base libgnutls30 phipack 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4380 kB of archives. After this operation, 1695 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 coreutils amd64 8.32-3 [2838 kB] Get:2 http://deb.debian.org/debian sid/main amd64 debianutils amd64 4.11.1 [101 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libgnutls30 amd64 3.6.15-1 [1189 kB] Get:4 http://deb.debian.org/debian sid/main amd64 gcc-9-base amd64 9.3.0-17 [197 kB] Get:5 http://deb.debian.org/debian sid/main amd64 phipack amd64 0.0.20160614-5 [54.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4380 kB in 0s (22.3 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6538 files and directories currently installed.) Preparing to unpack .../coreutils_8.32-3_amd64.deb ... Unpacking coreutils (8.32-3) over (8.30-3+b1) ... Setting up coreutils (8.32-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6626 files and directories currently installed.) Preparing to unpack .../debianutils_4.11.1_amd64.deb ... Unpacking debianutils (4.11.1) over (4.9.1) ... Setting up debianutils (4.11.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6626 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.15-1_amd64.deb ... Unpacking libgnutls30:amd64 (3.6.15-1) over (3.6.14-2+b1) ... Setting up libgnutls30:amd64 (3.6.15-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6625 files and directories currently installed.) Preparing to unpack .../gcc-9-base_9.3.0-17_amd64.deb ... Unpacking gcc-9-base:amd64 (9.3.0-17) over (9.3.0-15) ... Preparing to unpack .../phipack_0.0.20160614-5_amd64.deb ... Unpacking phipack (0.0.20160614-5) over (0.0.20160614-3) ... Setting up phipack (0.0.20160614-5) ... Setting up gcc-9-base:amd64 (9.3.0-17) ... Processing triggers for libc-bin (2.31-3) ... 0m14.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-yf', 'dist-upgrade'] 0m14.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m14.3s DUMP: 9dc1b793f6a91bcec861a435224e7c98 - 0m14.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m14.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'show', '--no-all-versions', 'phipack'] 0m14.5s DUMP: Package: phipack Version: 0.0.20160614-5 Installed-Size: 256 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 4.9) Description-en: PHI test and other tests of recombination The PhiPack software package implements a few tests for recombination and can produce refined incompatibility matrices as well. Specifically, PHIPack implements the 'Pairwise Homoplasy Index', Maximum Chi2 and the 'Neighbour Similarity Score'. The program Phi can be run to produce a p-value of recombination within a data set and the program profile can be run to determine regions exhibiting strongest evidence mosaicism. Description-md5: e153aba60d07145154853c706e973d36 Homepage: https://www.maths.otago.ac.nz/~dbryant/software/phimanual.pdf Section: science Priority: optional Filename: pool/main/p/phipack/phipack_0.0.20160614-5_amd64.deb Size: 54760 MD5sum: a3958697dafe8740fa6239608294f5d3 SHA256: 852293e353e6364140495eff12aee03eca4808e296ad14a27e55c52c902f3210 0m14.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'show', '--no-all-versions', 'phipack'] 0m14.5s INFO: apt-cache knows about the following packages: phipack 0m14.5s INFO: Running scripts pre_install 0m14.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_database-server'] 0m14.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_database-server'] 0m14.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_exceptions'] 0m14.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_exceptions'] 0m14.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_extras'] 0m14.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_extras'] 0m14.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m14.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m14.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m14.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m14.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy'] 0m14.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m14.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy'] 0m14.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy', 'phipack'] 0m14.7s DUMP: phipack: Installed: 0.0.20160614-5 Candidate: 0.0.20160614-5 Version table: *** 0.0.20160614-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m14.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy', 'phipack'] 0m14.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-y', 'install', 'phipack'] 0m15.0s DUMP: Reading package lists... Building dependency tree... Reading state information... phipack is already the newest version (0.0.20160614-5). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-y', 'install', 'phipack'] 0m15.0s INFO: Running scripts post_install 0m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_install_exceptions'] 0m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_install_exceptions'] 0m15.0s INFO: Running scripts post_distupgrade 0m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_exceptions'] 0m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_exceptions'] 0m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m15.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m15.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m15.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m15.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_zz_backports'] 0m15.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_distupgrade_zz_backports'] 0m15.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m15.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m15.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m15.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m15.5s INFO: Running scripts pre_install 0m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_database-server'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_database-server'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_exceptions'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_exceptions'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_extras'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_extras'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy'] 0m15.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy', 'phipack'] 0m15.7s DUMP: phipack: Installed: 0.0.20160614-5 Candidate: 0.0.20160614-5 Version table: *** 0.0.20160614-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m15.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-cache', 'policy', 'phipack'] 0m15.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-y', 'install', 'phipack=0.0.20160614-5'] 0m16.1s DUMP: Reading package lists... Building dependency tree... Reading state information... phipack is already the newest version (0.0.20160614-5). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', '-y', 'install', 'phipack=0.0.20160614-5'] 0m16.1s INFO: Running scripts post_install 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_install_exceptions'] 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_install_exceptions'] 0m16.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m16.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m16.6s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', '-ac', '--ignore-obsolete'] 0m17.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', '-ac', '--ignore-obsolete'] 0m17.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m17.2s DUMP: 0.15.2 0m17.2s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m17.2s INFO: Running adequate version 0.15.2 now. 0m17.2s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'phipack'] 0m17.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'phipack'] 0m17.4s INFO: Running scripts pre_remove 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_exceptions'] 0m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/pre_remove_exceptions'] 0m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m18.2s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 2.1.10 install ok installed base-files base-files 11 install ok installed base-passwd base-passwd 3.5.47 install ok installed bash bash 5.0-7 install ok installed bsdutils bsdutils 1:2.36-3 install ok installed coreutils coreutils 8.32-3 install ok installed dash dash 0.5.10.2-7 install ok installed debconf debconf 1.5.74 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.11.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.20.5 install ok installed e2fsprogs e2fsprogs 1.45.6-1 install ok installed findutils findutils 4.7.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.0-6 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-17 install ok installed gpgv gpgv 2.2.20-1 install ok installed grep grep 3.4-1 install ok installed gzip gzip 1.10-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.58 install ok installed libacl1:amd64 libacl1 2.2.53-8 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.1.10 install ok installed libattr1:amd64 libattr1 1:2.4.48-5 install ok installed libaudit-common libaudit-common 1:2.8.5-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.5-3+b1 install ok installed libblkid1:amd64 libblkid1 2.36-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-3 install ok installed libc6:amd64 libc6 2.31-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2 install ok installed libcom-err2:amd64 libcom-err2 1.45.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.17-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.6 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.253 install ok installed libext2fs2:amd64 libext2fs2 1.45.6-1 install ok installed libffi7:amd64 libffi7 3.3-4 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.0-6 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.6-2 install ok installed libgmp10:amd64 libgmp10 2:6.2.0+dfsg-6 install ok installed libgnutls30:amd64 libgnutls30 3.6.15-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libhogweed6:amd64 libhogweed6 3.6-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.2-2 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+b1 install ok installed libmount1:amd64 libmount1 2.36-3 install ok installed libnettle8:amd64 libnettle8 3.6-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.21-2 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.34-7 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.4.3-1+b1 install ok installed libselinux1:amd64 libselinux1 3.1-2 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36-3 install ok installed libss2:amd64 libss2 1.45.6-1 install ok installed libstdc++6:amd64 libstdc++6 10.2.0-6 install ok installed libsystemd0:amd64 libsystemd0 246.4-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.2-1 install ok installed libudev1:amd64 libudev1 246.4-1 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36-3 install ok installed libzstd1:amd64 libzstd1 1.4.5+dfsg-4 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.45.6-1 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36-3 install ok installed ncurses-base ncurses-base 6.2-1 install ok installed ncurses-bin ncurses-bin 6.2-1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.30.3-4 install ok installed phipack phipack 0.0.20160614-5 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-4 install ok installed tar tar 1.30+dfsg-7 install ok installed tzdata tzdata 2020a-1 install ok installed util-linux util-linux 2.36-3 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2 0m18.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m18.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', 'remove', 'phipack'] 0m18.7s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: phipack 0 upgraded, 0 newly installed, 1 to remove and 0 not upgraded. After this operation, 262 kB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6632 files and directories currently installed.) Removing phipack (0.0.20160614-5) ... 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', 'remove', 'phipack'] 0m18.7s INFO: Running scripts post_remove 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_remove_exceptions'] 0m18.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_remove_exceptions'] 0m18.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg', '--purge', 'phipack'] 0m18.8s DUMP: dpkg: warning: ignoring request to remove phipack which isn't installed 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg', '--purge', 'phipack'] 0m18.8s INFO: Running scripts post_purge 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_purge_exceptions'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_purge_exceptions'] 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg', '--purge', '--pending'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg', '--purge', '--pending'] 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg', '--remove', '--pending'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg', '--remove', '--pending'] 0m18.8s INFO: Running scripts post_test 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_test_exceptions'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'tmp/scripts/post_test_exceptions'] 0m18.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m19.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m19.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg-divert', '--list'] 0m19.1s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m19.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'dpkg-divert', '--list'] 0m19.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', 'clean'] 0m19.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsie7x_du', 'apt-get', 'clean'] 0m19.1s DEBUG: Recording chroot state 0m19.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/shm'] 0m20.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/shm'] 0m20.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/console'] 0m20.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/console'] 0m20.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/ptmx'] 0m20.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/ptmx'] 0m20.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/pts'] 0m20.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/dev/pts'] 0m20.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/proc'] 0m20.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsie7x_du/proc'] 0m20.1s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m20.1s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpsie7x_du'] 0m20.1s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpsie7x_du 0m20.1s INFO: PASS: Upgrading between Debian distributions. 0m20.1s INFO: PASS: All tests. 0m20.1s INFO: piuparts run ends. ret=0 End: 2020-09-09 16:15:12 GMT