Start: 2023-01-26 15:57:52 GMT [testing] Package: pizzly Version: 0.37.3+ds-8 Installed-Size: 864 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 12.2.0-9), zlib1g (>= 1:1.1.4), python3, kallisto Recommends: python3-h5py Description: Identifies gene fusions in RNA sequencing data Homepage: https://github.com/pmelsted/pizzly Description-md5: 723b171e9f8a4d57160db0ec1824e0c4 Section: science Priority: optional Filename: pool/main/p/pizzly/pizzly_0.37.3+ds-8_amd64.deb Size: 292800 MD5sum: 4fd354a533e0d93e8f84e2ecee16697f SHA256: e360b09e2dc80870d9cee7db5c387cecf5a4091d66f6bef097c2be105bc1004e [sid] Package: pizzly Version: 0.37.3+ds-9 Installed-Size: 864 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 12), zlib1g (>= 1:1.1.4), python3, kallisto Recommends: python3-h5py Description: Identifies gene fusions in RNA sequencing data Homepage: https://github.com/pmelsted/pizzly Description-md5: 723b171e9f8a4d57160db0ec1824e0c4 Section: science Priority: optional Filename: pool/main/p/pizzly/pizzly_0.37.3+ds-9_amd64.deb Size: 292360 MD5sum: aa7bb2e6bbeef14064ce305aabf04637 SHA256: 1bf52d23cbbea50cd2bf40b1f39300861ddb7efc736ceefc5bf2b1861f7f5718 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt pizzly=0.37.3+ds-9 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt pizzly=0.37.3+ds-9 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpctfl0zwh 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpctfl0zwh 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m2.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m2.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/proc'] 0m2.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/proc'] 0m2.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/pts'] 0m2.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/pts'] 0m2.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/ptmx'] 0m2.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/ptmx'] 0m2.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/console'] 0m2.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/console'] 0m2.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/shm'] 0m2.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/shm'] 0m2.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m2.5s DEBUG: Created policy-rc.d and chmodded it. 0m2.5s DEBUG: Created resolv.conf. 0m2.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpctfl0zwh/tmp/scripts/ 0m2.5s INFO: Running scripts post_chroot_unpack 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', 'update'] 0m5.4s DUMP: Get:1 http://deb.debian.org/debian bookworm InRelease [171 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 Packages [8902 kB] Get:3 http://deb.debian.org/debian bookworm/main Translation-en [6009 kB] Fetched 15.1 MB in 2s (7311 kB/s) Reading package lists... 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', 'update'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-yf', 'dist-upgrade'] 0m6.6s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: libpcre2-8-0 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 261 kB of archives. After this operation, 5120 B of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 libpcre2-8-0 amd64 10.42-1 [261 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 261 kB in 0s (3453 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8043 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.42-1_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.42-1) over (10.40-3) ... Setting up libpcre2-8-0:amd64 (10.42-1) ... Processing triggers for libc-bin (2.36-8) ... 0m6.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-yf', 'dist-upgrade'] 0m6.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.2s DUMP: d3ed1fae448b108556a855fa025eed25 - 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.2s INFO: Running scripts post_setup 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_dummy_users'] 0m8.4s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_dummy_users'] 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_forbid_home'] 0m8.4s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_forbid_home'] 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.5s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_minimize'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_minimize'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_zz_backports'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_setup_zz_backports'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.5s DUMP: install ok installed apt apt 2.5.5 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2 install ok installed bsdutils bsdutils 1:2.38.1-4 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-2 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-3 install ok installed dpkg dpkg 1.21.18 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1.1 install ok installed findutils findutils 4.9.0-4 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.5 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libblkid1:amd64 libblkid1 2.38.1-4 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-8 install ok installed libc6:amd64 libc6 2.36-8 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.66-3 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1.1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.266 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1.1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-3 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.0 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-4 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6 install ok installed libpam-runtime libpam-runtime 1.5.2-6 install ok installed libpam0g:amd64 libpam0g 1.5.2-6 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-7 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b4 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b4 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-4 install ok installed libss2:amd64 libss2 1.46.6~rc1-1.1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14 install ok installed libsystemd0:amd64 libsystemd0 252.4-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.4-1 install ok installed libudev1:amd64 libudev1 252.4-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-4 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg2-3 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1.1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-4 install ok installed ncurses-base ncurses-base 6.4-1 install ok installed ncurses-bin ncurses-bin 6.4-1 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-7 install ok installed perl-base perl-base 5.36.0-7 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-7 install ok installed sed sed 4.9-1 install ok installed sysvinit-utils sysvinit-utils 3.06-2 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2022g-2 install ok installed usr-is-merged usr-is-merged 35 install ok installed usrmerge usrmerge 35 install ok installed util-linux util-linux 2.38.1-4 install ok installed util-linux-extra util-linux-extra 2.38.1-4 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.5s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m8.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m8.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m8.9s INFO: Running scripts is_testable 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/is_testable_uninstallable'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/is_testable_uninstallable'] 0m8.9s INFO: Running scripts pre_test 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_test_exceptions'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_test_exceptions'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_test_root_password'] 0m9.0s DUMP: New password: Retype new password: passwd: password updated successfully 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_test_root_password'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'show', '--no-all-versions', 'pizzly'] 0m9.3s DUMP: Package: pizzly Version: 0.37.3+ds-8 Installed-Size: 864 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 12.2.0-9), zlib1g (>= 1:1.1.4), python3, kallisto Recommends: python3-h5py Description-en: Identifies gene fusions in RNA sequencing data For the interpretation of the transcriptome (the abundance and sequence of RNA) of tomour cells one is particularly interested in transcripts that cannot be mapped to single genes but that are seen to be fused as parts from two genes. Likely eplanations are chromosomal translocations. . Pizzly can identify novel such peculiarities, building on interpretations on variable splicing by the tool kallisto. Both tools are elements of the bcbio workflow. Description-md5: 723b171e9f8a4d57160db0ec1824e0c4 Homepage: https://github.com/pmelsted/pizzly Section: science Priority: optional Filename: pool/main/p/pizzly/pizzly_0.37.3+ds-8_amd64.deb Size: 292800 MD5sum: 4fd354a533e0d93e8f84e2ecee16697f SHA256: e360b09e2dc80870d9cee7db5c387cecf5a4091d66f6bef097c2be105bc1004e 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'show', '--no-all-versions', 'pizzly'] 0m9.3s INFO: apt-cache knows about the following packages: pizzly 0m9.3s INFO: Running scripts pre_install 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_database-server'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_database-server'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_exceptions'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_exceptions'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_extras'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_extras'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy'] 0m9.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release o=Debian,a=testing,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy', 'pizzly'] 0m9.4s DUMP: pizzly: Installed: (none) Candidate: 0.37.3+ds-8 Version table: 0.37.3+ds-8 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy', 'pizzly'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-y', 'install', 'pizzly'] 0m16.3s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: kallisto libbrotli1 libcurl3-gnutls libdeflate0 libexpat1 libgssapi-krb5-2 libhts3 libhtscodecs2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libmpdec3 libncursesw6 libnghttp2-14 libnsl2 libpsl5 libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libssl3 libtirpc-common libtirpc3 media-types python3 python3-minimal python3.10 python3.10-minimal readline-common Suggested packages: krb5-doc krb5-user python3-doc python3-tk python3-venv python3.10-venv python3.10-doc binutils binfmt-support readline-doc Recommended packages: ca-certificates krb5-locales libldap-common libgpm2 publicsuffix libsasl2-modules python3-h5py The following NEW packages will be installed: kallisto libbrotli1 libcurl3-gnutls libdeflate0 libexpat1 libgssapi-krb5-2 libhts3 libhtscodecs2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libmpdec3 libncursesw6 libnghttp2-14 libnsl2 libpsl5 libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libssl3 libtirpc-common libtirpc3 media-types pizzly python3 python3-minimal python3.10 python3.10-minimal readline-common 0 upgraded, 37 newly installed, 0 to remove and 0 not upgraded. Need to get 11.6 MB of archives. After this operation, 38.5 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.7-2 [2007 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libpython3.10-minimal amd64 3.10.9-1 [784 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 python3.10-minimal amd64 3.10.9-1 [1951 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.10.6-3+b1 [25.9 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 media-types all 8.0.0 [33.4 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 libncursesw6 amd64 6.4-1 [134 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-1 [32.2 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-1 [78.6 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:12 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-1 [331 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-1 [134 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 libtirpc-common all 1.3.3+ds-1 [14.0 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.40.1-1 [838 kB] Get:20 http://deb.debian.org/debian bookworm/main amd64 libpython3.10-stdlib amd64 3.10.9-1 [1684 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 python3.10 amd64 3.10.9-1 [509 kB] Get:22 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.10.6-3+b1 [8876 B] Get:23 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.10.6-3+b1 [25.5 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b5 [279 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-3 [183 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.51.0-1 [71.5 kB] Get:29 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:31 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 libcurl3-gnutls amd64 7.87.0-2 [369 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 libhtscodecs2 amd64 1.3.0-4 [87.5 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 libhts3 amd64 1.16+ds-3 [430 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 kallisto amd64 0.48.0+dfsg-3 [275 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 pizzly amd64 0.37.3+ds-8 [293 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 11.6 MB in 1s (12.9 MB/s) Selecting previously unselected package libssl3:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8045 files and directories currently installed.) Preparing to unpack .../libssl3_3.0.7-2_amd64.deb ... Unpacking libssl3:amd64 (3.0.7-2) ... Selecting previously unselected package libpython3.10-minimal:amd64. Preparing to unpack .../libpython3.10-minimal_3.10.9-1_amd64.deb ... Unpacking libpython3.10-minimal:amd64 (3.10.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.5.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.5.0-1) ... Selecting previously unselected package python3.10-minimal. Preparing to unpack .../python3.10-minimal_3.10.9-1_amd64.deb ... Unpacking python3.10-minimal (3.10.9-1) ... Setting up libssl3:amd64 (3.0.7-2) ... Setting up libpython3.10-minimal:amd64 (3.10.9-1) ... Setting up libexpat1:amd64 (2.5.0-1) ... Setting up python3.10-minimal (3.10.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8362 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.10.6-3+b1_amd64.deb ... Unpacking python3-minimal (3.10.6-3+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_8.0.0_all.deb ... Unpacking media-types (8.0.0) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../02-libmpdec3_2.5.1-2_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-2) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../03-libncursesw6_6.4-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.4-1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.20.1-1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../05-libk5crypto3_1.20.1-1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../06-libkeyutils1_1.6.3-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-2) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../07-libkrb5-3_1.20.1-1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../08-libgssapi-krb5-2_1.20.1-1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-1) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../09-libtirpc-common_1.3.3+ds-1_all.deb ... Unpacking libtirpc-common (1.3.3+ds-1) ... Selecting previously unselected package libtirpc3:amd64. Preparing to unpack .../10-libtirpc3_1.3.3+ds-1_amd64.deb ... Unpacking libtirpc3:amd64 (1.3.3+ds-1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../11-libnsl2_1.3.0-2_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../12-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../13-libreadline8_8.2-1.3_amd64.deb ... Unpacking libreadline8:amd64 (8.2-1.3) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../14-libsqlite3-0_3.40.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.40.1-1) ... Selecting previously unselected package libpython3.10-stdlib:amd64. Preparing to unpack .../15-libpython3.10-stdlib_3.10.9-1_amd64.deb ... Unpacking libpython3.10-stdlib:amd64 (3.10.9-1) ... Selecting previously unselected package python3.10. Preparing to unpack .../16-python3.10_3.10.9-1_amd64.deb ... Unpacking python3.10 (3.10.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.10.6-3+b1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.10.6-3+b1) ... Setting up python3-minimal (3.10.6-3+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8863 files and directories currently installed.) Preparing to unpack .../00-python3_3.10.6-3+b1_amd64.deb ... Unpacking python3 (3.10.6-3+b1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../01-libbrotli1_1.0.9-2+b5_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b5) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../02-libsasl2-modules-db_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../03-libsasl2-2_2.1.28+dfsg-10_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../04-libldap-2.5-0_2.5.13+dfsg-3_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.13+dfsg-3) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../05-libnghttp2-14_1.51.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.51.0-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../06-libpsl5_0.21.0-1.2_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../07-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../08-libssh2-1_1.10.0-3+b1_amd64.deb ... Unpacking libssh2-1:amd64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl3-gnutls:amd64. Preparing to unpack .../09-libcurl3-gnutls_7.87.0-2_amd64.deb ... Unpacking libcurl3-gnutls:amd64 (7.87.0-2) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../10-libdeflate0_1.14-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.14-1) ... Selecting previously unselected package libhtscodecs2:amd64. Preparing to unpack .../11-libhtscodecs2_1.3.0-4_amd64.deb ... Unpacking libhtscodecs2:amd64 (1.3.0-4) ... Selecting previously unselected package libhts3:amd64. Preparing to unpack .../12-libhts3_1.16+ds-3_amd64.deb ... Unpacking libhts3:amd64 (1.16+ds-3) ... Selecting previously unselected package kallisto. Preparing to unpack .../13-kallisto_0.48.0+dfsg-3_amd64.deb ... Unpacking kallisto (0.48.0+dfsg-3) ... Selecting previously unselected package pizzly. Preparing to unpack .../14-pizzly_0.37.3+ds-8_amd64.deb ... Unpacking pizzly (0.37.3+ds-8) ... Setting up libhtscodecs2:amd64 (1.3.0-4) ... Setting up media-types (8.0.0) ... Setting up libkeyutils1:amd64 (1.6.3-2) ... Setting up libpsl5:amd64 (0.21.0-1.2) ... Setting up libtirpc-common (1.3.3+ds-1) ... Setting up libbrotli1:amd64 (1.0.9-2+b5) ... Setting up libsqlite3-0:amd64 (3.40.1-1) ... Setting up libnghttp2-14:amd64 (1.51.0-1) ... Setting up libdeflate0:amd64 (1.14-1) ... Setting up libkrb5support0:amd64 (1.20.1-1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libncursesw6:amd64 (6.4-1) ... Setting up libk5crypto3:amd64 (1.20.1-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libmpdec3:amd64 (2.5.1-2) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up libkrb5-3:amd64 (1.20.1-1) ... Setting up readline-common (8.2-1.3) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-3) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-1) ... Setting up libtirpc3:amd64 (1.3.3+ds-1) ... Setting up libcurl3-gnutls:amd64 (7.87.0-2) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libhts3:amd64 (1.16+ds-3) ... Setting up libpython3.10-stdlib:amd64 (3.10.9-1) ... Setting up kallisto (0.48.0+dfsg-3) ... Setting up libpython3-stdlib:amd64 (3.10.6-3+b1) ... Setting up python3.10 (3.10.9-1) ... Setting up python3 (3.10.6-3+b1) ... Setting up pizzly (0.37.3+ds-8) ... Processing triggers for libc-bin (2.36-8) ... 0m16.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-y', 'install', 'pizzly'] 0m16.3s INFO: Running scripts post_install 0m16.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_install_exceptions'] 0m16.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_install_exceptions'] 0m16.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m16.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m16.8s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpctfl0zwh to sid 0m16.8s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m16.8s INFO: Running scripts pre_distupgrade 0m16.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m16.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m16.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_exceptions'] 0m16.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_exceptions'] 0m16.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m16.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m16.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m16.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m16.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m16.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m16.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', 'update'] 0m21.6s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [167 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9403 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6964 kB] Fetched 16.5 MB in 4s (4488 kB/s) Reading package lists... 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', 'update'] 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-yf', 'dist-upgrade'] 0m27.0s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libpython3.10-minimal libpython3.10-stdlib python3.10 python3.10-minimal Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: libpython3.11-minimal libpython3.11-stdlib python3.11 python3.11-minimal The following packages will be upgraded: dpkg grep libncursesw6 libpython3-stdlib libsystemd0 libtinfo6 libudev1 ncurses-base ncurses-bin pizzly python3 python3-minimal tar 13 upgraded, 4 newly installed, 0 to remove and 0 not upgraded. Need to get 9854 kB of archives. After this operation, 21.2 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 tar amd64 1.34+dfsg-1.1 [836 kB] Get:2 http://deb.debian.org/debian sid/main amd64 dpkg amd64 1.21.19 [1506 kB] Get:3 http://deb.debian.org/debian sid/main amd64 grep amd64 3.8-5 [421 kB] Get:4 http://deb.debian.org/debian sid/main amd64 ncurses-bin amd64 6.4-2 [421 kB] Get:5 http://deb.debian.org/debian sid/main amd64 ncurses-base all 6.4-2 [261 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libpython3.11-minimal amd64 3.11.1-2 [812 kB] Get:7 http://deb.debian.org/debian sid/main amd64 python3.11-minimal amd64 3.11.1-2 [2065 kB] Get:8 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.11.1-1 [25.5 kB] Get:9 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.11.1-1 [25.2 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libncursesw6 amd64 6.4-2 [134 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libtinfo6 amd64 6.4-2 [331 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libpython3.11-stdlib amd64 3.11.1-2 [1712 kB] Get:13 http://deb.debian.org/debian sid/main amd64 python3.11 amd64 3.11.1-2 [567 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.11.1-1 [8580 B] Get:15 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 252.4-2 [329 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 252.4-2 [107 kB] Get:17 http://deb.debian.org/debian sid/main amd64 pizzly amd64 0.37.3+ds-9 [292 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9854 kB in 0s (20.9 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8998 files and directories currently installed.) Preparing to unpack .../tar_1.34+dfsg-1.1_amd64.deb ... Unpacking tar (1.34+dfsg-1.1) over (1.34+dfsg-1) ... Setting up tar (1.34+dfsg-1.1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8998 files and directories currently installed.) Preparing to unpack .../archives/grep_3.8-5_amd64.deb ... Unpacking grep (3.8-5) over (3.8-3) ... Setting up grep (3.8-5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8998 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.4-2_amd64.deb ... Unpacking ncurses-bin (6.4-2) over (6.4-1) ... Setting up ncurses-bin (6.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8998 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.4-2_all.deb ... Unpacking ncurses-base (6.4-2) over (6.4-1) ... Setting up ncurses-base (6.4-2) ... Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8998 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.1-2_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.1-2) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.1-2_amd64.deb ... Unpacking python3.11-minimal (3.11.1-2) ... Setting up libpython3.11-minimal:amd64 (3.11.1-2) ... Setting up python3.11-minimal (3.11.1-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9303 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.11.1-1_amd64.deb ... Unpacking python3-minimal (3.11.1-1) over (3.10.6-3+b1) ... Setting up python3-minimal (3.11.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9302 files and directories currently installed.) Preparing to unpack .../python3_3.11.1-1_amd64.deb ... Unpacking python3 (3.11.1-1) over (3.10.6-3+b1) ... Preparing to unpack .../libncursesw6_6.4-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.4-2) over (6.4-1) ... Preparing to unpack .../libtinfo6_6.4-2_amd64.deb ... Unpacking libtinfo6:amd64 (6.4-2) over (6.4-1) ... Setting up libtinfo6:amd64 (6.4-2) ... Selecting previously unselected package libpython3.11-stdlib:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9302 files and directories currently installed.) Preparing to unpack .../libpython3.11-stdlib_3.11.1-2_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.1-2) ... Selecting previously unselected package python3.11. Preparing to unpack .../python3.11_3.11.1-2_amd64.deb ... Unpacking python3.11 (3.11.1-2) ... Preparing to unpack .../libpython3-stdlib_3.11.1-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.1-1) over (3.10.6-3+b1) ... Preparing to unpack .../libsystemd0_252.4-2_amd64.deb ... Unpacking libsystemd0:amd64 (252.4-2) over (252.4-1) ... Setting up libsystemd0:amd64 (252.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9671 files and directories currently installed.) Preparing to unpack .../libudev1_252.4-2_amd64.deb ... Unpacking libudev1:amd64 (252.4-2) over (252.4-1) ... Setting up libudev1:amd64 (252.4-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9671 files and directories currently installed.) Preparing to unpack .../pizzly_0.37.3+ds-9_amd64.deb ... Unpacking pizzly (0.37.3+ds-9) over (0.37.3+ds-8) ... Setting up libncursesw6:amd64 (6.4-2) ... Setting up libpython3.11-stdlib:amd64 (3.11.1-2) ... Setting up libpython3-stdlib:amd64 (3.11.1-1) ... Setting up python3.11 (3.11.1-2) ... Setting up python3 (3.11.1-1) ... Setting up pizzly (0.37.3+ds-9) ... Processing triggers for libc-bin (2.36-8) ... 0m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-yf', 'dist-upgrade'] 0m27.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m27.4s DUMP: 61e4e7bec26d782e5fd9d85f34de281f - 0m27.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m27.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'show', '--no-all-versions', 'pizzly'] 0m27.6s DUMP: Package: pizzly Version: 0.37.3+ds-9 Installed-Size: 864 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libstdc++6 (>= 12), zlib1g (>= 1:1.1.4), python3, kallisto Recommends: python3-h5py Description-en: Identifies gene fusions in RNA sequencing data For the interpretation of the transcriptome (the abundance and sequence of RNA) of tomour cells one is particularly interested in transcripts that cannot be mapped to single genes but that are seen to be fused as parts from two genes. Likely eplanations are chromosomal translocations. . Pizzly can identify novel such peculiarities, building on interpretations on variable splicing by the tool kallisto. Both tools are elements of the bcbio workflow. Description-md5: 723b171e9f8a4d57160db0ec1824e0c4 Homepage: https://github.com/pmelsted/pizzly Section: science Priority: optional Filename: pool/main/p/pizzly/pizzly_0.37.3+ds-9_amd64.deb Size: 292360 MD5sum: aa7bb2e6bbeef14064ce305aabf04637 SHA256: 1bf52d23cbbea50cd2bf40b1f39300861ddb7efc736ceefc5bf2b1861f7f5718 0m27.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'show', '--no-all-versions', 'pizzly'] 0m27.6s INFO: apt-cache knows about the following packages: pizzly 0m27.6s INFO: Running scripts pre_install 0m27.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_database-server'] 0m27.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_database-server'] 0m27.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_exceptions'] 0m27.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_exceptions'] 0m27.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_extras'] 0m27.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_extras'] 0m27.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture'] 0m27.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture'] 0m27.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m27.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m27.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy'] 0m27.7s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m27.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy'] 0m27.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy', 'pizzly'] 0m27.7s DUMP: pizzly: Installed: 0.37.3+ds-9 Candidate: 0.37.3+ds-9 Version table: *** 0.37.3+ds-9 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m27.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy', 'pizzly'] 0m27.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-y', 'install', 'pizzly'] 0m28.3s DUMP: Reading package lists... Building dependency tree... Reading state information... pizzly is already the newest version (0.37.3+ds-9). The following packages were automatically installed and are no longer required: libpython3.10-minimal libpython3.10-stdlib python3.10 python3.10-minimal Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-y', 'install', 'pizzly'] 0m28.3s INFO: Running scripts post_install 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_install_exceptions'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_install_exceptions'] 0m28.3s INFO: Running scripts post_distupgrade 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_exceptions'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_exceptions'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_zz_backports'] 0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_distupgrade_zz_backports'] 0m28.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m29.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m29.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m29.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m29.7s INFO: Running scripts pre_install 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_database-server'] 0m29.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_database-server'] 0m29.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_exceptions'] 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_exceptions'] 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_extras'] 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_extras'] 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture'] 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m29.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy'] 0m29.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m29.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy'] 0m29.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy', 'pizzly'] 0m29.9s DUMP: pizzly: Installed: 0.37.3+ds-9 Candidate: 0.37.3+ds-9 Version table: *** 0.37.3+ds-9 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m29.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-cache', 'policy', 'pizzly'] 0m29.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-y', 'install', 'pizzly=0.37.3+ds-9'] 0m30.6s DUMP: Reading package lists... Building dependency tree... Reading state information... pizzly is already the newest version (0.37.3+ds-9). The following packages were automatically installed and are no longer required: libpython3.10-minimal libpython3.10-stdlib python3.10 python3.10-minimal Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m30.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', '-y', 'install', 'pizzly=0.37.3+ds-9'] 0m30.6s INFO: Running scripts post_install 0m30.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_install_exceptions'] 0m30.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_install_exceptions'] 0m30.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m31.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m31.6s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', '-ac', '--ignore-obsolete'] 0m35.6s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', '-ac', '--ignore-obsolete'] 0m35.6s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.7s DUMP: 0.15.6 0m35.7s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.7s INFO: Running adequate version 0.15.6 now. 0m35.7s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'pizzly'] 0m35.9s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'pizzly'] 0m35.9s INFO: Running scripts pre_remove 0m35.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m35.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m35.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m35.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m35.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m37.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m37.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m37.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m37.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m37.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m37.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_exceptions'] 0m37.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/pre_remove_exceptions'] 0m37.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m37.7s DUMP: install ok installed apt apt 2.5.5 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2 install ok installed bsdutils bsdutils 1:2.38.1-4 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-2 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-3 install ok installed dpkg dpkg 1.21.19 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1.1 install ok installed findutils findutils 4.9.0-4 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-5 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed kallisto kallisto 0.48.0+dfsg-3 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.5 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libblkid1:amd64 libblkid1 2.38.1-4 install ok installed libbrotli1:amd64 libbrotli1 1.0.9-2+b5 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-8 install ok installed libc6:amd64 libc6 2.36-8 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.66-3 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1.1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2 install ok installed libcurl3-gnutls:amd64 libcurl3-gnutls 7.87.0-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.266 install ok installed libdeflate0:amd64 libdeflate0 1.14-1 install ok installed libexpat1:amd64 libexpat1 2.5.0-1 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1.1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-3 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.20.1-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libhts3:amd64 libhts3 1.16+ds-3 install ok installed libhtscodecs2:amd64 libhtscodecs2 1.3.0-4 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed libk5crypto3:amd64 libk5crypto3 1.20.1-1 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.20.1-1 install ok installed libkrb5support0:amd64 libkrb5support0 1.20.1-1 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.13+dfsg-3 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.0 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-4 install ok installed libmpdec3:amd64 libmpdec3 2.5.1-2 install ok installed libncursesw6:amd64 libncursesw6 6.4-2 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.51.0-1 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6 install ok installed libpam-runtime libpam-runtime 1.5.2-6 install ok installed libpam0g:amd64 libpam0g 1.5.2-6 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-7 install ok installed libpsl5:amd64 libpsl5 0.21.0-1.2 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.11.1-1 install ok installed libpython3.10-minimal:amd64 libpython3.10-minimal 3.10.9-1 install ok installed libpython3.10-stdlib:amd64 libpython3.10-stdlib 3.10.9-1 install ok installed libpython3.11-minimal:amd64 libpython3.11-minimal 3.11.1-2 install ok installed libpython3.11-stdlib:amd64 libpython3.11-stdlib 3.11.1-2 install ok installed libreadline8:amd64 libreadline8 8.2-1.3 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg-10 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg-10 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b4 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b4 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-4 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.40.1-1 install ok installed libss2:amd64 libss2 1.46.6~rc1-1.1 install ok installed libssh2-1:amd64 libssh2-1 1.10.0-3+b1 install ok installed libssl3:amd64 libssl3 3.0.7-2 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14 install ok installed libsystemd0:amd64 libsystemd0 252.4-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.4-2 install ok installed libtirpc-common libtirpc-common 1.3.3+ds-1 install ok installed libtirpc3:amd64 libtirpc3 1.3.3+ds-1 install ok installed libudev1:amd64 libudev1 252.4-2 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-4 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg2-3 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1.1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed media-types media-types 8.0.0 install ok installed mount mount 2.38.1-4 install ok installed ncurses-base ncurses-base 6.4-2 install ok installed ncurses-bin ncurses-bin 6.4-2 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-7 install ok installed perl-base perl-base 5.36.0-7 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-7 install ok installed pizzly pizzly 0.37.3+ds-9 install ok installed python3 python3 3.11.1-1 install ok installed python3-minimal python3-minimal 3.11.1-1 install ok installed python3.10 python3.10 3.10.9-1 install ok installed python3.10-minimal python3.10-minimal 3.10.9-1 install ok installed python3.11 python3.11 3.11.1-2 install ok installed python3.11-minimal python3.11-minimal 3.11.1-2 install ok installed readline-common readline-common 8.2-1.3 install ok installed sed sed 4.9-1 install ok installed sysvinit-utils sysvinit-utils 3.06-2 install ok installed tar tar 1.34+dfsg-1.1 install ok installed tzdata tzdata 2022g-2 install ok installed usr-is-merged usr-is-merged 35 install ok installed usrmerge usrmerge 35 install ok installed util-linux util-linux 2.38.1-4 install ok installed util-linux-extra util-linux-extra 2.38.1-4 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m37.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m37.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', 'remove', 'kallisto', 'libbrotli1:amd64', 'libcurl3-gnutls:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libgssapi-krb5-2:amd64', 'libhts3:amd64', 'libhtscodecs2:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'media-types', 'python3', 'python3-minimal', 'python3.10', 'python3.10-minimal', 'python3.11', 'python3.11-minimal', 'readline-common', 'pizzly'] 0m39.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: kallisto libbrotli1 libcurl3-gnutls libdeflate0 libexpat1 libgssapi-krb5-2 libhts3 libhtscodecs2 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 libmpdec3 libncursesw6 libnghttp2-14 libnsl2 libpsl5 libpython3-stdlib libpython3.10-minimal libpython3.10-stdlib libpython3.11-minimal libpython3.11-stdlib libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1 libssl3 libtirpc-common libtirpc3 media-types pizzly python3 python3-minimal python3.10 python3.10-minimal python3.11 python3.11-minimal readline-common 0 upgraded, 0 newly installed, 41 to remove and 0 not upgraded. After this operation, 59.7 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 9671 files and directories currently installed.) Removing pizzly (0.37.3+ds-9) ... Removing kallisto (0.48.0+dfsg-3) ... Removing libhts3:amd64 (1.16+ds-3) ... Removing libcurl3-gnutls:amd64 (7.87.0-2) ... Removing libbrotli1:amd64 (1.0.9-2+b5) ... Removing libdeflate0:amd64 (1.14-1) ... Removing python3 (3.11.1-1) ... Removing python3.11 (3.11.1-2) ... Removing python3-minimal (3.11.1-1) ... Removing python3.11-minimal (3.11.1-2) ... Removing python3.10 (3.10.9-1) ... Removing python3.10-minimal (3.10.9-1) ... Removing libexpat1:amd64 (2.5.0-1) ... Removing libpython3-stdlib:amd64 (3.11.1-1) ... Removing libpython3.11-stdlib:amd64 (3.11.1-2) ... find: '/usr/lib/python3': No such file or directory Removing libpython3.10-stdlib:amd64 (3.10.9-1) ... find: '/usr/lib/python3': No such file or directory Removing libhtscodecs2:amd64 (1.3.0-4) ... Removing libldap-2.5-0:amd64 (2.5.13+dfsg-3) ... Removing libmpdec3:amd64 (2.5.1-2) ... Removing libncursesw6:amd64 (6.4-2) ... Removing libnghttp2-14:amd64 (1.51.0-1) ... Removing libnsl2:amd64 (1.3.0-2) ... Removing libpsl5:amd64 (0.21.0-1.2) ... Removing libpython3.10-minimal:amd64 (3.10.9-1) ... find: '/usr/lib/python3': No such file or directory Removing libpython3.11-minimal:amd64 (3.11.1-2) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8:amd64 (8.2-1.3) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.28+dfsg-10) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Removing libsqlite3-0:amd64 (3.40.1-1) ... Removing libssh2-1:amd64 (1.10.0-3+b1) ... Removing media-types (8.0.0) ... Removing readline-common (8.2-1.3) ... Removing libtirpc3:amd64 (1.3.3+ds-1) ... Removing libgssapi-krb5-2:amd64 (1.20.1-1) ... Removing libkrb5-3:amd64 (1.20.1-1) ... Removing libk5crypto3:amd64 (1.20.1-1) ... Removing libkeyutils1:amd64 (1.6.3-2) ... Removing libkrb5support0:amd64 (1.20.1-1) ... Removing libssl3:amd64 (3.0.7-2) ... Removing libtirpc-common (1.3.3+ds-1) ... Processing triggers for libc-bin (2.36-8) ... 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', 'remove', 'kallisto', 'libbrotli1:amd64', 'libcurl3-gnutls:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libgssapi-krb5-2:amd64', 'libhts3:amd64', 'libhtscodecs2:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'media-types', 'python3', 'python3-minimal', 'python3.10', 'python3.10-minimal', 'python3.11', 'python3.11-minimal', 'readline-common', 'pizzly'] 0m39.2s INFO: Running scripts post_remove 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_remove_exceptions'] 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_remove_exceptions'] 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg', '--purge', 'kallisto', 'libbrotli1:amd64', 'libcurl3-gnutls:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libgssapi-krb5-2:amd64', 'libhts3:amd64', 'libhtscodecs2:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'media-types', 'python3', 'python3-minimal', 'python3.10', 'python3.10-minimal', 'python3.11', 'python3.11-minimal', 'readline-common'] 0m39.3s DUMP: dpkg: warning: ignoring request to remove kallisto which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libcurl3-gnutls which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed (Reading database ... 8051 files and directories currently installed.) Purging configuration files for libgssapi-krb5-2:amd64 (1.20.1-1) ... dpkg: warning: ignoring request to remove libhts3 which isn't installed dpkg: warning: ignoring request to remove libhtscodecs2 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove libmpdec3 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnsl2 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed Purging configuration files for libpython3.10-minimal:amd64 (3.10.9-1) ... dpkg: warning: ignoring request to remove libpython3.10-stdlib which isn't installed Purging configuration files for libpython3.11-minimal:amd64 (3.11.1-2) ... dpkg: warning: ignoring request to remove libpython3.11-stdlib which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libssl3 which isn't installed Purging configuration files for libtirpc-common (1.3.3+ds-1) ... dpkg: warning: ignoring request to remove libtirpc3 which isn't installed Purging configuration files for media-types (8.0.0) ... Purging configuration files for python3 (3.11.1-1) ... dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3.10 which isn't installed Purging configuration files for python3.10-minimal (3.10.9-1) ... dpkg: warning: ignoring request to remove python3.11 which isn't installed Purging configuration files for python3.11-minimal (3.11.1-2) ... Purging configuration files for readline-common (8.2-1.3) ... 0m39.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg', '--purge', 'kallisto', 'libbrotli1:amd64', 'libcurl3-gnutls:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libgssapi-krb5-2:amd64', 'libhts3:amd64', 'libhtscodecs2:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libldap-2.5-0:amd64', 'libmpdec3:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libpsl5:amd64', 'libpython3-stdlib:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'media-types', 'python3', 'python3-minimal', 'python3.10', 'python3.10-minimal', 'python3.11', 'python3.11-minimal', 'readline-common'] 0m39.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg', '--purge', 'pizzly'] 0m39.3s DUMP: dpkg: warning: ignoring request to remove pizzly which isn't installed 0m39.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg', '--purge', 'pizzly'] 0m39.3s INFO: Running scripts post_purge 0m39.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_purge_exceptions'] 0m39.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_purge_exceptions'] 0m39.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg', '--purge', '--pending'] 0m39.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg', '--purge', '--pending'] 0m39.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg', '--remove', '--pending'] 0m39.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg', '--remove', '--pending'] 0m39.3s INFO: Running scripts post_test 0m39.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_test_exceptions'] 0m39.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'tmp/scripts/post_test_exceptions'] 0m39.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m39.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m39.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg-divert', '--list'] 0m39.8s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m39.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'dpkg-divert', '--list'] 0m39.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', 'clean'] 0m39.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh', 'apt-get', 'clean'] 0m39.8s DEBUG: Recording chroot state 0m40.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/shm'] 0m40.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/shm'] 0m40.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/console'] 0m40.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/console'] 0m40.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/ptmx'] 0m41.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/ptmx'] 0m41.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/pts'] 0m41.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/dev/pts'] 0m41.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/proc'] 0m41.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh/proc'] 0m41.0s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m41.2s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpctfl0zwh'] 0m41.2s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpctfl0zwh 0m41.2s INFO: PASS: Upgrading between Debian distributions. 0m41.2s INFO: PASS: All tests. 0m41.2s INFO: piuparts run ends. ret=0 End: 2023-01-26 15:58:34 GMT