Start: 2020-12-05 12:15:19 GMT [testing] Package: python3-denss Source: denss Version: 0.0.1+20200710gac8923a-2 Installed-Size: 288 Maintainer: Debian Science Maintainers Architecture: all Depends: python3-numpy, python3-scipy, python3:any Description: calculate electron density from a solution scattering profile Homepage: https://github.com/tdgrant1/denss Description-md5: e47304cfcd41e0ed9a10ac4e3aaafb69 Section: python Priority: optional Filename: pool/main/d/denss/python3-denss_0.0.1+20200710gac8923a-2_all.deb Size: 55808 MD5sum: f6923b86d73d2863c7994c2bb0e9d6e4 SHA256: 32737345883c5ba20f4c38f7ec678d6adc7db999df334df21101582c84412c33 [sid] Package: python3-denss Source: denss Version: 0.0.1+20200710gac8923a-2 Installed-Size: 288 Maintainer: Debian Science Maintainers Architecture: all Depends: python3-numpy, python3-scipy, python3:any Description: calculate electron density from a solution scattering profile Homepage: https://github.com/tdgrant1/denss Description-md5: e47304cfcd41e0ed9a10ac4e3aaafb69 Section: python Priority: optional Filename: pool/main/d/denss/python3-denss_0.0.1+20200710gac8923a-2_all.deb Size: 55808 MD5sum: f6923b86d73d2863c7994c2bb0e9d6e4 SHA256: 32737345883c5ba20f4c38f7ec678d6adc7db999df334df21101582c84412c33 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-denss=0.0.1+20200710gac8923a-2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.2~202004292056~1.1.1-20-gd7155993 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-denss=0.0.1+20200710gac8923a-2 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.19.0-12-amd64 #1 SMP Debian 4.19.152-1 (2020-10-18) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpr89ab9j2 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpr89ab9j2 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz'] 0m1.8s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz'] 0m1.8s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/proc'] 0m1.8s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/proc'] 0m1.8s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/pts'] 0m1.8s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/pts'] 0m1.8s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/ptmx'] 0m1.8s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/ptmx'] 0m1.8s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/console'] 0m1.9s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/console'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/shm'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/shm'] 0m1.9s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m1.9s DEBUG: Created policy-rc.d and chmodded it. 0m1.9s DEBUG: Created resolv.conf. 0m1.9s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpr89ab9j2/tmp/scripts/ 0m1.9s INFO: Running scripts post_chroot_unpack 0m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', 'update'] 0m5.1s DUMP: Get:1 http://deb.debian.org/debian bullseye InRelease [120 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 Packages [7908 kB] Get:3 http://deb.debian.org/debian bullseye/main Translation-en [6044 kB] Fetched 14.1 MB in 3s (5562 kB/s) Reading package lists... 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', 'update'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-yf', 'dist-upgrade'] 0m6.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: apt libapt-pkg6.0 libtinfo6 ncurses-base ncurses-bin 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 3503 kB of archives. After this operation, 19.5 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 ncurses-bin amd64 6.2+20201114-1 [428 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 libapt-pkg6.0 amd64 2.1.12 [995 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 apt amd64 2.1.12 [1468 kB] Get:4 http://deb.debian.org/debian bullseye/main amd64 ncurses-base all 6.2+20201114-1 [271 kB] Get:5 http://deb.debian.org/debian bullseye/main amd64 libtinfo6 amd64 6.2+20201114-1 [341 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 3503 kB in 0s (27.2 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6675 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.2+20201114-1_amd64.deb ... Unpacking ncurses-bin (6.2+20201114-1) over (6.2+20200918-1) ... Setting up ncurses-bin (6.2+20201114-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6675 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0_2.1.12_amd64.deb ... Unpacking libapt-pkg6.0:amd64 (2.1.12) over (2.1.11) ... Setting up libapt-pkg6.0:amd64 (2.1.12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6675 files and directories currently installed.) Preparing to unpack .../archives/apt_2.1.12_amd64.deb ... Unpacking apt (2.1.12) over (2.1.11) ... Setting up apt (2.1.12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6681 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.2+20201114-1_all.deb ... Unpacking ncurses-base (6.2+20201114-1) over (6.2+20200918-1) ... Setting up ncurses-base (6.2+20201114-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6681 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.2+20201114-1_amd64.deb ... Unpacking libtinfo6:amd64 (6.2+20201114-1) over (6.2+20200918-1) ... Setting up libtinfo6:amd64 (6.2+20201114-1) ... Processing triggers for libc-bin (2.31-4) ... 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-yf', 'dist-upgrade'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.7s DUMP: c651f91952625d2ee7a97dd2dba313e3 - 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.7s INFO: Running scripts post_setup 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_dummy_users'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_dummy_users'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_forbid_home'] 0m8.5s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_forbid_home'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.5s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_minimize'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_minimize'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_zz_backports'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_setup_zz_backports'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.5s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 2.1.12 install ok installed base-files base-files 11 install ok installed base-passwd base-passwd 3.5.48 install ok installed bash bash 5.1~rc3-1 install ok installed bsdutils bsdutils 1:2.36.1-1 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-2 install ok installed debconf debconf 1.5.74 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.20.5 install ok installed e2fsprogs e2fsprogs 1.45.6-1 install ok installed findutils findutils 4.7.0+git20201010-2 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.0-19 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-19 install ok installed gpgv gpgv 2.2.20-1 install ok installed grep grep 3.6-1 install ok installed gzip gzip 1.10-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.59 install ok installed libacl1:amd64 libacl1 2.2.53-8 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.1.12 install ok installed libattr1:amd64 libattr1 1:2.4.48-5 install ok installed libaudit-common libaudit-common 1:2.8.5-3.1 install ok installed libaudit1:amd64 libaudit1 1:2.8.5-3.1 install ok installed libblkid1:amd64 libblkid1 2.36.1-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-4 install ok installed libc6:amd64 libc6 2.31-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2 install ok installed libcom-err2:amd64 libcom-err2 1.45.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.17-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.6 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.255 install ok installed libext2fs2:amd64 libext2fs2 1.45.6-1 install ok installed libffi7:amd64 libffi7 3.3-5 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.0-19 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-2 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1 install ok installed libgnutls30:amd64 libgnutls30 3.6.15-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-4 install ok installed libhogweed6:amd64 libhogweed6 3.6-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-4 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-4 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-4 install ok installed liblz4-1:amd64 liblz4-1 1.9.2-2 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+b1 install ok installed libmount1:amd64 libmount1 2.36.1-1 install ok installed libnettle8:amd64 libnettle8 3.6-2 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libnss-nis:amd64 libnss-nis 3.1-4 install ok installed libnss-nisplus:amd64 libnss-nisplus 1.3-4 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.21-2 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.34-7 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libseccomp2:amd64 libseccomp2 2.5.0-3 install ok installed libselinux1:amd64 libselinux1 3.1-2+b1 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b1 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-1 install ok installed libss2:amd64 libss2 1.45.6-1 install ok installed libssl1.1:amd64 libssl1.1 1.1.1h-1 install ok installed libstdc++6:amd64 libstdc++6 10.2.0-19 install ok installed libsystemd0:amd64 libsystemd0 246.6-4 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-1 install ok installed libtirpc-common libtirpc-common 1.2.6-3 install ok installed libtirpc3:amd64 libtirpc3 1.2.6-3 install ok installed libudev1:amd64 libudev1 246.6-4 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-1 install ok installed libzstd1:amd64 libzstd1 1.4.5+dfsg-4 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.45.6-1 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.36.1-1 install ok installed ncurses-base ncurses-base 6.2+20201114-1 install ok installed ncurses-bin ncurses-bin 6.2+20201114-1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.32.0-5 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-5 install ok installed tar tar 1.32+dfsg-1 install ok installed tzdata tzdata 2020d-1 install ok installed util-linux util-linux 2.36.1-1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.5s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m8.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m8.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m8.8s INFO: Running scripts is_testable 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/is_testable_uninstallable'] 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/is_testable_uninstallable'] 0m8.8s INFO: Running scripts pre_test 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_test_exceptions'] 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_test_exceptions'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_test_root_password'] 0m8.8s DUMP: New password: Retype new password: passwd: password updated successfully 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_test_root_password'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'show', '--no-all-versions', 'python3-denss'] 0m9.0s DUMP: Package: python3-denss Source: denss Version: 0.0.1+20200710gac8923a-2 Installed-Size: 288 Maintainer: Debian Science Maintainers Architecture: all Depends: python3-numpy, python3-scipy, python3:any Description-en: calculate electron density from a solution scattering profile DENSS is an algorithm used for calculating ab initio electron density maps directly from solution scattering data. DENSS implements a novel iterative structure factor retrieval algorithm to cycle between real space density and reciprocal space structure factors, applying appropriate restraints in each domain to obtain a set of structure factors whose intensities are consistent with experimental data and whose electron density is consistent with expected real space properties of particles. . DENSS utilizes the NumPy Fast Fourier Transform for moving between real and reciprocal space domains. Each domain is represented by a grid of points (Cartesian), N x N x N. N is determined by the size of the system and the desired resolution. The real space size of the box is determined by the maximum dimension of the particle, D, and the desired sampling ratio. Larger sampling ratio results in a larger real space box and therefore a higher sampling in reciprocal space (i.e. distance between data points in q). Smaller voxel size in real space corresponds to higher spatial resolution and therefore to larger q values in reciprocal space. Description-md5: e47304cfcd41e0ed9a10ac4e3aaafb69 Homepage: https://github.com/tdgrant1/denss Section: python Priority: optional Filename: pool/main/d/denss/python3-denss_0.0.1+20200710gac8923a-2_all.deb Size: 55808 MD5sum: f6923b86d73d2863c7994c2bb0e9d6e4 SHA256: 32737345883c5ba20f4c38f7ec678d6adc7db999df334df21101582c84412c33 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'show', '--no-all-versions', 'python3-denss'] 0m9.0s INFO: apt-cache knows about the following packages: python3-denss 0m9.0s INFO: Running scripts pre_install 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_database-server'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_database-server'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_exceptions'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_exceptions'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_extras'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_extras'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy'] 0m9.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release o=Debian,a=testing,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m9.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy'] 0m9.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy', 'python3-denss'] 0m9.1s DUMP: python3-denss: Installed: (none) Candidate: 0.0.1+20200710gac8923a-2 Version table: 0.0.1+20200710gac8923a-2 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 0m9.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy', 'python3-denss'] 0m9.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-y', 'install', 'python3-denss'] 0m24.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libblas3 libexpat1 libgdbm-compat4 libgdbm6 libgfortran5 liblapack3 liblbfgsb0 libncursesw6 libperl5.32 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 libsqlite3-0 mailcap media-types mime-support perl perl-modules-5.32 python3 python3-decorator python3-minimal python3-numpy python3-pkg-resources python3-scipy python3.8 python3.8-minimal python3.9 python3.9-minimal readline-common Suggested packages: gdbm-l10n sensible-utils perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl make libtap-harness-archive-perl python3-doc python3-tk python3-venv gcc gfortran python-numpy-doc python3-dev python3-pytest python3-numpy-dbg python3-setuptools python-scipy-doc python3.8-venv python3.8-doc binutils binfmt-support python3.9-venv python3.9-doc readline-doc Recommended packages: libgpm2 ca-certificates bzip2 file xz-utils netbase g++ | c++-compiler python3-pil The following NEW packages will be installed: libblas3 libexpat1 libgdbm-compat4 libgdbm6 libgfortran5 liblapack3 liblbfgsb0 libncursesw6 libperl5.32 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 libsqlite3-0 mailcap media-types mime-support perl perl-modules-5.32 python3 python3-decorator python3-denss python3-minimal python3-numpy python3-pkg-resources python3-scipy python3.8 python3.8-minimal python3.9 python3.9-minimal readline-common 0 upgraded, 34 newly installed, 0 to remove and 0 not upgraded. Need to get 39.1 MB of archives. After this operation, 199 MB of additional disk space will be used. 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Setting up liblapack3:amd64 (3.9.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libreadline8:amd64 (8.1~rc3-1) ... Setting up libgdbm-compat4:amd64 (1.18.1-5.1) ... Setting up libperl5.32:amd64 (5.32.0-5) ... Setting up libpython3.9-stdlib:amd64 (3.9.1~rc1-2) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.3-9) ... Setting up perl (5.32.0-5) ... Setting up mailcap (3.67) ... Setting up mime-support (3.66) ... Setting up libpython3.8-stdlib:amd64 (3.8.6-1) ... Setting up python3.8 (3.8.6-1) ... Setting up python3.9 (3.9.1~rc1-2) ... Setting up libpython3-stdlib:amd64 (3.8.6-1) ... Setting up python3 (3.8.6-1) ... Setting up python3-decorator (4.4.2-2) ... Setting up python3-pkg-resources (50.3.0-1) ... Setting up python3-numpy (1:1.19.4-1) ... Setting up python3-scipy (1.5.4-1) ... Setting up python3-denss (0.0.1+20200710gac8923a-2) ... Processing triggers for libc-bin (2.31-4) ... 0m24.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-y', 'install', 'python3-denss'] 0m24.6s INFO: Running scripts post_install 0m24.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_install_exceptions'] 0m24.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_install_exceptions'] 0m24.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m25.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m25.1s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpr89ab9j2 to sid 0m25.1s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m25.1s INFO: Running scripts pre_distupgrade 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_exceptions'] 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_exceptions'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', 'update'] 0m29.3s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [150 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [8524 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6416 kB] Fetched 15.1 MB in 3s (4700 kB/s) Reading package lists... 0m29.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', 'update'] 0m29.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-yf', 'dist-upgrade'] 0m32.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: bsdutils gcc-10-base libblkid1 libc-bin libc6 libcap-ng0 libgcc-s1 libgfortran5 libmount1 libpcre2-8-0 libpython3-stdlib libquadmath0 libsmartcols1 libsqlite3-0 libstdc++6 libsystemd0 libudev1 libuuid1 mount python3 python3-minimal util-linux 22 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 9053 kB of archives. After this operation, 199 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.36.1-2 [148 kB] Get:2 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.36.1-2 [1139 kB] Get:3 http://deb.debian.org/debian sid/main amd64 gcc-10-base amd64 10.2.0-23 [200 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 10.2.0-23 [41.4 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 10.2.0-23 [145 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 10.2.0-23 [727 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 10.2.0-23 [492 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libc6 amd64 2.31-5 [2806 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libc-bin amd64 2.31-5 [811 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 247.1-3 [374 kB] Get:11 http://deb.debian.org/debian sid/main amd64 mount amd64 2.36.1-2 [184 kB] Get:12 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.9.0-3 [37.8 kB] Get:13 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.9.0-3 [64.0 kB] Get:14 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.9.0-3 [21.0 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.36.1-2 [192 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libcap-ng0 amd64 0.7.9-2.2+b1 [14.8 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.36.1-2 [210 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libpcre2-8-0 amd64 10.35-2 [244 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.36.1-2 [156 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 247.1-3 [165 kB] Get:21 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.36.1-2 [82.7 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libsqlite3-0 amd64 3.34.0-1 [796 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9053 kB in 0s (43.4 MB/s) (Reading database ... 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Setting up libstdc++6:amd64 (10.2.0-23) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11850 files and directories currently installed.) Preparing to unpack .../libc6_2.31-5_amd64.deb ... Unpacking libc6:amd64 (2.31-5) over (2.31-4) ... Setting up libc6:amd64 (2.31-5) ... (Reading database ... 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Processing triggers for libc-bin (2.31-5) ... Processing triggers for mailcap (3.67) ... 0m32.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-yf', 'dist-upgrade'] 0m32.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m33.1s DUMP: f33bdf89a697feeeb5c481825269df76 - 0m33.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m33.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'show', '--no-all-versions', 'python3-denss'] 0m33.4s DUMP: Package: python3-denss Source: denss Version: 0.0.1+20200710gac8923a-2 Installed-Size: 288 Maintainer: Debian Science Maintainers Architecture: all Depends: python3-numpy, python3-scipy, python3:any Description-en: calculate electron density from a solution scattering profile DENSS is an algorithm used for calculating ab initio electron density maps directly from solution scattering data. DENSS implements a novel iterative structure factor retrieval algorithm to cycle between real space density and reciprocal space structure factors, applying appropriate restraints in each domain to obtain a set of structure factors whose intensities are consistent with experimental data and whose electron density is consistent with expected real space properties of particles. . DENSS utilizes the NumPy Fast Fourier Transform for moving between real and reciprocal space domains. Each domain is represented by a grid of points (Cartesian), N x N x N. N is determined by the size of the system and the desired resolution. The real space size of the box is determined by the maximum dimension of the particle, D, and the desired sampling ratio. Larger sampling ratio results in a larger real space box and therefore a higher sampling in reciprocal space (i.e. distance between data points in q). Smaller voxel size in real space corresponds to higher spatial resolution and therefore to larger q values in reciprocal space. Description-md5: e47304cfcd41e0ed9a10ac4e3aaafb69 Homepage: https://github.com/tdgrant1/denss Section: python Priority: optional Filename: pool/main/d/denss/python3-denss_0.0.1+20200710gac8923a-2_all.deb Size: 55808 MD5sum: f6923b86d73d2863c7994c2bb0e9d6e4 SHA256: 32737345883c5ba20f4c38f7ec678d6adc7db999df334df21101582c84412c33 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'show', '--no-all-versions', 'python3-denss'] 0m33.4s INFO: apt-cache knows about the following packages: python3-denss 0m33.4s INFO: Running scripts pre_install 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_database-server'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_database-server'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_exceptions'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_exceptions'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_extras'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_extras'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy'] 0m33.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy'] 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy', 'python3-denss'] 0m33.5s DUMP: python3-denss: Installed: 0.0.1+20200710gac8923a-2 Candidate: 0.0.1+20200710gac8923a-2 Version table: *** 0.0.1+20200710gac8923a-2 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m33.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy', 'python3-denss'] 0m33.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-y', 'install', 'python3-denss'] 0m33.9s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-denss is already the newest version (0.0.1+20200710gac8923a-2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-y', 'install', 'python3-denss'] 0m33.9s INFO: Running scripts post_install 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_install_exceptions'] 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_install_exceptions'] 0m33.9s INFO: Running scripts post_distupgrade 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_exceptions'] 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_exceptions'] 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_zz_backports'] 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_distupgrade_zz_backports'] 0m33.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m34.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m34.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m35.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m35.0s INFO: Running scripts pre_install 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_database-server'] 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_database-server'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_exceptions'] 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_exceptions'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_extras'] 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_extras'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture'] 0m35.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture'] 0m35.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m35.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m35.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy'] 0m35.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m35.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy'] 0m35.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy', 'python3-denss'] 0m35.2s DUMP: python3-denss: Installed: 0.0.1+20200710gac8923a-2 Candidate: 0.0.1+20200710gac8923a-2 Version table: *** 0.0.1+20200710gac8923a-2 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m35.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-cache', 'policy', 'python3-denss'] 0m35.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-y', 'install', 'python3-denss=0.0.1+20200710gac8923a-2'] 0m35.7s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-denss is already the newest version (0.0.1+20200710gac8923a-2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m35.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', '-y', 'install', 'python3-denss=0.0.1+20200710gac8923a-2'] 0m35.7s INFO: Running scripts post_install 0m35.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_install_exceptions'] 0m35.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_install_exceptions'] 0m35.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m36.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m36.9s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', '-ac', '--ignore-obsolete'] 0m38.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', '-ac', '--ignore-obsolete'] 0m38.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m38.2s DUMP: 0.15.2 0m38.2s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m38.2s INFO: Running adequate version 0.15.2 now. 0m38.2s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'python3-denss'] 0m38.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'python3-denss'] 0m38.4s INFO: Running scripts pre_remove 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m39.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m39.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m39.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m39.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m39.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m39.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_exceptions'] 0m39.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/pre_remove_exceptions'] 0m39.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m39.6s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 2.1.12 install ok installed base-files base-files 11 install ok installed base-passwd base-passwd 3.5.48 install ok installed bash bash 5.1~rc3-1 install ok installed bsdutils bsdutils 1:2.36.1-2 install ok installed coreutils coreutils 8.32-4+b1 install ok installed dash dash 0.5.11+git20200708+dd9ef66-2 install ok installed debconf debconf 1.5.74 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.11.2 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.20.5 install ok installed e2fsprogs e2fsprogs 1.45.6-1 install ok installed findutils findutils 4.7.0+git20201010-2 install ok installed gcc-10-base:amd64 gcc-10-base 10.2.0-23 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-19 install ok installed gpgv gpgv 2.2.20-1 install ok installed grep grep 3.6-1 install ok installed gzip gzip 1.10-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.59 install ok installed libacl1:amd64 libacl1 2.2.53-8 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.1.12 install ok installed libattr1:amd64 libattr1 1:2.4.48-5 install ok installed libaudit-common libaudit-common 1:2.8.5-3.1 install ok installed libaudit1:amd64 libaudit1 1:2.8.5-3.1 install ok installed libblas3:amd64 libblas3 3.9.0-3 install ok installed libblkid1:amd64 libblkid1 2.36.1-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-4 install ok installed libc-bin libc-bin 2.31-5 install ok installed libc6:amd64 libc6 2.31-5 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2+b1 install ok installed libcom-err2:amd64 libcom-err2 1.45.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.17-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.6 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.255 install ok installed libexpat1:amd64 libexpat1 2.2.10-1 install ok installed libext2fs2:amd64 libext2fs2 1.45.6-1 install ok installed libffi7:amd64 libffi7 3.3-5 install ok installed libgcc-s1:amd64 libgcc-s1 10.2.0-23 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.7-2 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.18.1-5.1 install ok installed libgdbm6:amd64 libgdbm6 1.18.1-5.1 install ok installed libgfortran5:amd64 libgfortran5 10.2.0-23 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg-1 install ok installed libgnutls30:amd64 libgnutls30 3.6.15-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.18.3-4 install ok installed libhogweed6:amd64 libhogweed6 3.6-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-4 install ok installed libk5crypto3:amd64 libk5crypto3 1.18.3-4 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.18.3-4 install ok installed libkrb5support0:amd64 libkrb5support0 1.18.3-4 install ok installed liblapack3:amd64 liblapack3 3.9.0-3 install ok installed liblbfgsb0:amd64 liblbfgsb0 3.0+dfsg.3-9 install ok installed liblz4-1:amd64 liblz4-1 1.9.2-2 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+b1 install ok installed libmount1:amd64 libmount1 2.36.1-2 install ok installed libncursesw6:amd64 libncursesw6 6.2+20201114-1 install ok installed libnettle8:amd64 libnettle8 3.6-2 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libnss-nis:amd64 libnss-nis 3.1-4 install ok installed libnss-nisplus:amd64 libnss-nisplus 1.3-4 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.21-2 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.35-2 install ok installed libpcre3:amd64 libpcre3 2:8.39-13 install ok installed libperl5.32:amd64 libperl5.32 5.32.0-5 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.9.0-3 install ok installed libpython3.8-minimal:amd64 libpython3.8-minimal 3.8.6-1 install ok installed libpython3.8-stdlib:amd64 libpython3.8-stdlib 3.8.6-1 install ok installed libpython3.9-minimal:amd64 libpython3.9-minimal 3.9.1~rc1-2 install ok installed libpython3.9-stdlib:amd64 libpython3.9-stdlib 3.9.1~rc1-2 install ok installed libquadmath0:amd64 libquadmath0 10.2.0-23 install ok installed libreadline8:amd64 libreadline8 8.1~rc3-1 install ok installed libseccomp2:amd64 libseccomp2 2.5.0-3 install ok installed libselinux1:amd64 libselinux1 3.1-2+b1 install ok installed libsemanage-common libsemanage-common 3.1-1 install ok installed libsemanage1:amd64 libsemanage1 3.1-1+b1 install ok installed libsepol1:amd64 libsepol1 3.1-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.36.1-2 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.34.0-1 install ok installed libss2:amd64 libss2 1.45.6-1 install ok installed libssl1.1:amd64 libssl1.1 1.1.1h-1 install ok installed libstdc++6:amd64 libstdc++6 10.2.0-23 install ok installed libsystemd0:amd64 libsystemd0 247.1-3 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.2+20201114-1 install ok installed libtirpc-common libtirpc-common 1.2.6-3 install ok installed libtirpc3:amd64 libtirpc3 1.2.6-3 install ok installed libudev1:amd64 libudev1 247.1-3 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.36.1-2 install ok installed libzstd1:amd64 libzstd1 1.4.5+dfsg-4 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.45.6-1 install ok installed lsb-base lsb-base 11.1.0 install ok installed mailcap mailcap 3.67 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed media-types media-types 1.0.1 install ok installed mime-support mime-support 3.66 install ok installed mount mount 2.36.1-2 install ok installed ncurses-base ncurses-base 6.2+20201114-1 install ok installed ncurses-bin ncurses-bin 6.2+20201114-1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl perl 5.32.0-5 install ok installed perl-base perl-base 5.32.0-5 install ok installed perl-modules-5.32 perl-modules-5.32 5.32.0-5 install ok installed python3 python3 3.9.0-3 install ok installed python3-decorator python3-decorator 4.4.2-2 install ok installed python3-denss python3-denss 0.0.1+20200710gac8923a-2 install ok installed python3-minimal python3-minimal 3.9.0-3 install ok installed python3-numpy python3-numpy 1:1.19.4-1 install ok installed python3-pkg-resources python3-pkg-resources 50.3.0-1 install ok installed python3-scipy python3-scipy 1.5.4-1 install ok installed python3.8 python3.8 3.8.6-1 install ok installed python3.8-minimal python3.8-minimal 3.8.6-1 install ok installed python3.9 python3.9 3.9.1~rc1-2 install ok installed python3.9-minimal python3.9-minimal 3.9.1~rc1-2 install ok installed readline-common readline-common 8.1~rc3-1 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-5 install ok installed tar tar 1.32+dfsg-1 install ok installed tzdata tzdata 2020d-1 install ok installed util-linux util-linux 2.36.1-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2 0m39.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m39.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', 'remove', 'libblas3:amd64', 'libexpat1:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran5:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libncursesw6:amd64', 'libperl5.32:amd64', 'libpython3-stdlib:amd64', 'libpython3.8-minimal:amd64', 'libpython3.8-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'libsqlite3-0:amd64', 'mailcap', 'media-types', 'mime-support', 'perl', 'perl-modules-5.32', 'python3', 'python3-decorator', 'python3-minimal', 'python3-numpy', 'python3-pkg-resources', 'python3-scipy', 'python3.8', 'python3.8-minimal', 'python3.9', 'python3.9-minimal', 'readline-common', 'python3-denss'] 0m41.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libblas3 libexpat1 libgdbm-compat4 libgdbm6 libgfortran5 liblapack3 liblbfgsb0 libncursesw6 libperl5.32 libpython3-stdlib libpython3.8-minimal libpython3.8-stdlib libpython3.9-minimal libpython3.9-stdlib libquadmath0 libreadline8 libsqlite3-0 mailcap media-types mime-support perl perl-modules-5.32 python3 python3-decorator python3-denss python3-minimal python3-numpy python3-pkg-resources python3-scipy python3.8 python3.8-minimal python3.9 python3.9-minimal readline-common 0 upgraded, 0 newly installed, 34 to remove and 0 not upgraded. After this operation, 199 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11851 files and directories currently installed.) Removing python3-denss (0.0.1+20200710gac8923a-2) ... Removing python3-scipy (1.5.4-1) ... Removing python3-numpy (1:1.19.4-1) ... Removing liblbfgsb0:amd64 (3.0+dfsg.3-9) ... Removing liblapack3:amd64 (3.9.0-3) ... Removing libblas3:amd64 (3.9.0-3) ... Removing python3-pkg-resources (50.3.0-1) ... Removing python3-decorator (4.4.2-2) ... Removing python3 (3.9.0-3) ... Removing python3.9 (3.9.1~rc1-2) ... Removing python3-minimal (3.9.0-3) ... Removing python3.9-minimal (3.9.1~rc1-2) ... Removing python3.8 (3.8.6-1) ... Removing python3.8-minimal (3.8.6-1) ... Removing libexpat1:amd64 (2.2.10-1) ... Removing libpython3-stdlib:amd64 (3.9.0-3) ... Removing libpython3.9-stdlib:amd64 (3.9.1~rc1-2) ... find: '/usr/lib/python3': No such file or directory Removing libpython3.8-stdlib:amd64 (3.8.6-1) ... find: '/usr/lib/python3': No such file or directory Removing mime-support (3.66) ... Removing mailcap (3.67) ... Removing perl (5.32.0-5) ... Removing libperl5.32:amd64 (5.32.0-5) ... Removing libgdbm-compat4:amd64 (1.18.1-5.1) ... Removing libgdbm6:amd64 (1.18.1-5.1) ... Removing libgfortran5:amd64 (10.2.0-23) ... Removing libncursesw6:amd64 (6.2+20201114-1) ... Removing libpython3.8-minimal:amd64 (3.8.6-1) ... find: '/usr/lib/python3': No such file or directory Removing libpython3.9-minimal:amd64 (3.9.1~rc1-2) ... find: '/usr/lib/python3': No such file or directory Removing libquadmath0:amd64 (10.2.0-23) ... Removing libreadline8:amd64 (8.1~rc3-1) ... Removing libsqlite3-0:amd64 (3.34.0-1) ... Removing media-types (1.0.1) ... Removing perl-modules-5.32 (5.32.0-5) ... Removing readline-common (8.1~rc3-1) ... Processing triggers for libc-bin (2.31-5) ... 0m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', 'remove', 'libblas3:amd64', 'libexpat1:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran5:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libncursesw6:amd64', 'libperl5.32:amd64', 'libpython3-stdlib:amd64', 'libpython3.8-minimal:amd64', 'libpython3.8-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'libsqlite3-0:amd64', 'mailcap', 'media-types', 'mime-support', 'perl', 'perl-modules-5.32', 'python3', 'python3-decorator', 'python3-minimal', 'python3-numpy', 'python3-pkg-resources', 'python3-scipy', 'python3.8', 'python3.8-minimal', 'python3.9', 'python3.9-minimal', 'readline-common', 'python3-denss'] 0m41.5s INFO: Running scripts post_remove 0m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_remove_exceptions'] 0m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_remove_exceptions'] 0m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg', '--purge', 'libblas3:amd64', 'libexpat1:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran5:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libncursesw6:amd64', 'libperl5.32:amd64', 'libpython3-stdlib:amd64', 'libpython3.8-minimal:amd64', 'libpython3.8-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'libsqlite3-0:amd64', 'mailcap', 'media-types', 'mime-support', 'perl', 'perl-modules-5.32', 'python3', 'python3-decorator', 'python3-minimal', 'python3-numpy', 'python3-pkg-resources', 'python3-scipy', 'python3.8', 'python3.8-minimal', 'python3.9', 'python3.9-minimal', 'readline-common'] 0m41.5s DUMP: dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libgdbm-compat4 which isn't installed dpkg: warning: ignoring request to remove libgdbm6 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblbfgsb0 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libperl5.32 which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed (Reading database ... 6693 files and directories currently installed.) Purging configuration files for libpython3.8-minimal:amd64 (3.8.6-1) ... dpkg: warning: ignoring request to remove libpython3.8-stdlib which isn't installed Purging configuration files for libpython3.9-minimal:amd64 (3.9.1~rc1-2) ... dpkg: warning: ignoring request to remove libpython3.9-stdlib which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed Purging configuration files for mailcap (3.67) ... Purging configuration files for media-types (1.0.1) ... dpkg: warning: ignoring request to remove mime-support which isn't installed Purging configuration files for perl (5.32.0-5) ... dpkg: warning: ignoring request to remove perl-modules-5.32 which isn't installed Purging configuration files for python3 (3.9.0-3) ... dpkg: warning: ignoring request to remove python3-decorator which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-scipy which isn't installed dpkg: warning: ignoring request to remove python3.8 which isn't installed Purging configuration files for python3.8-minimal (3.8.6-1) ... dpkg: warning: ignoring request to remove python3.9 which isn't installed Purging configuration files for python3.9-minimal (3.9.1~rc1-2) ... Purging configuration files for readline-common (8.1~rc3-1) ... 0m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg', '--purge', 'libblas3:amd64', 'libexpat1:amd64', 'libgdbm-compat4:amd64', 'libgdbm6:amd64', 'libgfortran5:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'libncursesw6:amd64', 'libperl5.32:amd64', 'libpython3-stdlib:amd64', 'libpython3.8-minimal:amd64', 'libpython3.8-stdlib:amd64', 'libpython3.9-minimal:amd64', 'libpython3.9-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'libsqlite3-0:amd64', 'mailcap', 'media-types', 'mime-support', 'perl', 'perl-modules-5.32', 'python3', 'python3-decorator', 'python3-minimal', 'python3-numpy', 'python3-pkg-resources', 'python3-scipy', 'python3.8', 'python3.8-minimal', 'python3.9', 'python3.9-minimal', 'readline-common'] 0m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg', '--purge', 'python3-denss'] 0m41.6s DUMP: dpkg: warning: ignoring request to remove python3-denss which isn't installed 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg', '--purge', 'python3-denss'] 0m41.6s INFO: Running scripts post_purge 0m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_purge_exceptions'] 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_purge_exceptions'] 0m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg', '--purge', '--pending'] 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg', '--purge', '--pending'] 0m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg', '--remove', '--pending'] 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg', '--remove', '--pending'] 0m41.6s INFO: Running scripts post_test 0m41.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_test_exceptions'] 0m41.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'tmp/scripts/post_test_exceptions'] 0m41.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m41.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m41.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg-divert', '--list'] 0m41.9s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m41.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'dpkg-divert', '--list'] 0m41.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', 'clean'] 0m41.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2', 'apt-get', 'clean'] 0m41.9s DEBUG: Recording chroot state 0m42.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/shm'] 0m42.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/shm'] 0m42.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/console'] 0m42.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/console'] 0m42.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/ptmx'] 0m42.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/ptmx'] 0m42.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/pts'] 0m42.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/dev/pts'] 0m42.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/proc'] 0m42.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2/proc'] 0m42.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m42.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpr89ab9j2'] 0m42.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpr89ab9j2 0m42.7s INFO: PASS: Upgrading between Debian distributions. 0m42.7s INFO: PASS: All tests. 0m42.7s INFO: piuparts run ends. ret=0 End: 2020-12-05 12:16:01 GMT