Start: 2025-02-26 23:09:39 GMT
[testing]
Package: python3-freesasa
Source: python-freesasa (2.1.0-3)
Version: 2.1.0-3+b4
Installed-Size: 965
Maintainer: Debian Python Team <team+python@tracker.debian.org>
Architecture: amd64
Depends: python3 (<< 3.14), python3 (>= 3.12~), libc6 (>= 2.34), libjson-c5 (>= 0.15), libxml2 (>= 2.7.4)
Suggests: python-freesasa-doc
Description: Python bindings for FreeSASA (Python 3)
Homepage: https://freesasa.github.io/python/
Description-md5: 94a8fd39351b5d254343bf7e7b94e256
Section: python
Priority: optional
Filename: pool/main/p/python-freesasa/python3-freesasa_2.1.0-3+b4_amd64.deb
Size: 200256
MD5sum: 421a6b8b75b1ab8c7c90ea03cd2fca69
SHA256: c0f4b187b6bd4ec615af2bb83cc326a56a4763610489e7abc307d11651097315
[sid]
Package: python3-freesasa
Source: python-freesasa (2.1.0-3)
Version: 2.1.0-3+b5
Installed-Size: 505
Maintainer: Debian Python Team <team+python@tracker.debian.org>
Architecture: amd64
Depends: python3 (<< 3.14), python3 (>= 3.13~), libc6 (>= 2.34), libjson-c5 (>= 0.15), libxml2 (>= 2.7.4)
Suggests: python-freesasa-doc
Description: Python bindings for FreeSASA (Python 3)
Homepage: https://freesasa.github.io/python/
Description-md5: 94a8fd39351b5d254343bf7e7b94e256
Section: python
Priority: optional
Filename: pool/main/p/python-freesasa/python3-freesasa_2.1.0-3+b5_amd64.deb
Size: 155764
MD5sum: 621efe87c5628982f11b4ef95c2c438b
SHA256: d5bd327c2f62bbb0de21dcfc2ff83bf5a265afb916a1c516ace099cc5907d213
Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-freesasa=2.1.0-3+b5
0m0.0s INFO: ------------------------------------------------------------------------------
0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile.
0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ
0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong.
0m0.0s INFO: ------------------------------------------------------------------------------
0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up.
0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-freesasa=2.1.0-3+b5
0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64
0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp8jaevgnh
0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp8jaevgnh
0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz']
0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz']
0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/proc']
0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/proc']
0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/pts']
0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/pts']
0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/ptmx']
0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/ptmx']
0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/console']
0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/console']
0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/shm']
0m0.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/shm']
0m0.4s DEBUG: sources.list:
deb http://deb.debian.org/debian/ trixie main
0m0.4s DEBUG: Created policy-rc.d and chmodded it.
0m0.4s DEBUG: Created resolv.conf.
0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp8jaevgnh/tmp/scripts/
0m0.4s INFO: Running scripts post_chroot_unpack
0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated']
0m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated']
0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', 'update']
0m2.4s DUMP:
Get:1 http://deb.debian.org/debian trixie InRelease [175 kB]
Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9490 kB]
Get:3 http://deb.debian.org/debian trixie/main Translation-en [6365 kB]
Fetched 16.0 MB in 1s (14.7 MB/s)
Reading package lists...
0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', 'update']
0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-yf', 'dist-upgrade']
0m6.3s DUMP:
Reading package lists...
Building dependency tree...
Calculating upgrade...
The following NEW packages will be installed:
libapt-pkg7.0
The following packages will be upgraded:
apt bash bsdutils libattr1 libblkid1 libc-bin libc6 libhogweed6t64 libmount1
libnettle8t64 libpcre2-8-0 libselinux1 libsemanage-common libsemanage2
libsmartcols1 libtinfo6 libuuid1 login login.defs mount ncurses-base
ncurses-bin passwd util-linux
24 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 13.2 MB of archives.
After this operation, 3980 kB of additional disk space will be used.
Get:1 http://deb.debian.org/debian trixie/main amd64 bash amd64 5.2.37-1.1 [1500 kB]
Get:2 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.4-4 [106 kB]
Get:3 http://deb.debian.org/debian trixie/main amd64 ncurses-bin amd64 6.5+20250216-1 [439 kB]
Get:4 http://deb.debian.org/debian trixie/main amd64 libc6 amd64 2.40-7 [2815 kB]
Get:5 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.4-4 [36.5 kB]
Get:6 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.4-4 [169 kB]
Get:7 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.4-4 [200 kB]
Get:8 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.4-4 [140 kB]
Get:9 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.4-4 [1206 kB]
Get:10 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.4-4 [156 kB]
Get:11 http://deb.debian.org/debian trixie/main amd64 libpcre2-8-0 amd64 10.45-1 [298 kB]
Get:12 http://deb.debian.org/debian trixie/main amd64 libselinux1 amd64 3.8-3 [84.6 kB]
Get:13 http://deb.debian.org/debian trixie/main amd64 libapt-pkg7.0 amd64 2.9.30 [1104 kB]
Get:14 http://deb.debian.org/debian trixie/main amd64 apt amd64 2.9.30 [1440 kB]
Get:15 http://deb.debian.org/debian trixie/main amd64 libc-bin amd64 2.40-7 [631 kB]
Get:16 http://deb.debian.org/debian trixie/main amd64 ncurses-base all 6.5+20250216-1 [273 kB]
Get:17 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.4-4 [88.7 kB]
Get:18 http://deb.debian.org/debian trixie/main amd64 libattr1 amd64 1:2.5.2-3 [22.9 kB]
Get:19 http://deb.debian.org/debian trixie/main amd64 libnettle8t64 amd64 3.10.1-1 [305 kB]
Get:20 http://deb.debian.org/debian trixie/main amd64 libhogweed6t64 amd64 3.10.1-1 [335 kB]
Get:21 http://deb.debian.org/debian trixie/main amd64 libtinfo6 amd64 6.5+20250216-1 [348 kB]
Get:22 http://deb.debian.org/debian trixie/main amd64 login.defs all 1:4.17.2-5 [186 kB]
Get:23 http://deb.debian.org/debian trixie/main amd64 libsemanage-common all 3.8-1 [7720 B]
Get:24 http://deb.debian.org/debian trixie/main amd64 libsemanage2 amd64 3.8-1 [94.4 kB]
Get:25 http://deb.debian.org/debian trixie/main amd64 passwd amd64 1:4.17.2-5 [1234 kB]
Preconfiguring packages ...
Fetched 13.2 MB in 0s (131 MB/s)
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5026 files and directories currently installed.)
Preparing to unpack .../bash_5.2.37-1.1_amd64.deb ...
Unpacking bash (5.2.37-1.1) over (5.2.37-1) ...
Setting up bash (5.2.37-1.1) ...
update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5026 files and directories currently installed.)
Preparing to unpack .../bsdutils_1%3a2.40.4-4_amd64.deb ...
Unpacking bsdutils (1:2.40.4-4) over (1:2.40.4-3) ...
Setting up bsdutils (1:2.40.4-4) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5026 files and directories currently installed.)
Preparing to unpack .../ncurses-bin_6.5+20250216-1_amd64.deb ...
Unpacking ncurses-bin (6.5+20250216-1) over (6.5+20250125-2) ...
Setting up ncurses-bin (6.5+20250216-1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5026 files and directories currently installed.)
Preparing to unpack .../libc6_2.40-7_amd64.deb ...
Unpacking libc6:amd64 (2.40-7) over (2.40-6) ...
Setting up libc6:amd64 (2.40-7) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5026 files and directories currently installed.)
Preparing to unpack .../libuuid1_2.40.4-4_amd64.deb ...
Unpacking libuuid1:amd64 (2.40.4-4) over (2.40.4-3) ...
Setting up libuuid1:amd64 (2.40.4-4) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5026 files and directories currently installed.)
Preparing to unpack .../libblkid1_2.40.4-4_amd64.deb ...
Unpacking libblkid1:amd64 (2.40.4-4) over (2.40.4-3) ...
Setting up libblkid1:amd64 (2.40.4-4) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5026 files and directories currently installed.)
Preparing to unpack .../libmount1_2.40.4-4_amd64.deb ...
Unpacking libmount1:amd64 (2.40.4-4) over (2.40.4-3) ...
Setting up libmount1:amd64 (2.40.4-4) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5026 files and directories currently installed.)
Preparing to unpack .../libsmartcols1_2.40.4-4_amd64.deb ...
Unpacking libsmartcols1:amd64 (2.40.4-4) over (2.40.4-3) ...
Setting up libsmartcols1:amd64 (2.40.4-4) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5026 files and directories currently installed.)
Preparing to unpack .../util-linux_2.40.4-4_amd64.deb ...
Unpacking util-linux (2.40.4-4) over (2.40.4-3) ...
Setting up util-linux (2.40.4-4) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5023 files and directories currently installed.)
Preparing to unpack .../mount_2.40.4-4_amd64.deb ...
Unpacking mount (2.40.4-4) over (2.40.4-3) ...
Preparing to unpack .../libpcre2-8-0_10.45-1_amd64.deb ...
Unpacking libpcre2-8-0:amd64 (10.45-1) over (10.44-5) ...
Setting up libpcre2-8-0:amd64 (10.45-1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5023 files and directories currently installed.)
Preparing to unpack .../libselinux1_3.8-3_amd64.deb ...
Unpacking libselinux1:amd64 (3.8-3) over (3.7-3.1) ...
Setting up libselinux1:amd64 (3.8-3) ...
/var/lib/dpkg/info/libselinux1:amd64.postinst: 6: sestatus: not found
Selecting previously unselected package libapt-pkg7.0:amd64.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5023 files and directories currently installed.)
Preparing to unpack .../libapt-pkg7.0_2.9.30_amd64.deb ...
Unpacking libapt-pkg7.0:amd64 (2.9.30) ...
Setting up libapt-pkg7.0:amd64 (2.9.30) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5072 files and directories currently installed.)
Preparing to unpack .../archives/apt_2.9.30_amd64.deb ...
Unpacking apt (2.9.30) over (2.9.29) ...
Setting up apt (2.9.30) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5072 files and directories currently installed.)
Preparing to unpack .../libc-bin_2.40-7_amd64.deb ...
Unpacking libc-bin (2.40-7) over (2.40-6) ...
Setting up libc-bin (2.40-7) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5072 files and directories currently installed.)
Preparing to unpack .../ncurses-base_6.5+20250216-1_all.deb ...
Unpacking ncurses-base (6.5+20250216-1) over (6.5+20250125-2) ...
Setting up ncurses-base (6.5+20250216-1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5072 files and directories currently installed.)
Preparing to unpack .../login_1%3a4.16.0-2+really2.40.4-4_amd64.deb ...
Unpacking login (1:4.16.0-2+really2.40.4-4) over (1:4.16.0-2+really2.40.4-3) ...
Preparing to unpack .../libattr1_1%3a2.5.2-3_amd64.deb ...
Unpacking libattr1:amd64 (1:2.5.2-3) over (1:2.5.2-2) ...
Setting up libattr1:amd64 (1:2.5.2-3) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5072 files and directories currently installed.)
Preparing to unpack .../libnettle8t64_3.10.1-1_amd64.deb ...
Unpacking libnettle8t64:amd64 (3.10.1-1) over (3.10-1+b1) ...
Setting up libnettle8t64:amd64 (3.10.1-1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5071 files and directories currently installed.)
Preparing to unpack .../libhogweed6t64_3.10.1-1_amd64.deb ...
Unpacking libhogweed6t64:amd64 (3.10.1-1) over (3.10-1+b1) ...
Setting up libhogweed6t64:amd64 (3.10.1-1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5070 files and directories currently installed.)
Preparing to unpack .../libtinfo6_6.5+20250216-1_amd64.deb ...
Unpacking libtinfo6:amd64 (6.5+20250216-1) over (6.5+20250125-2) ...
Setting up libtinfo6:amd64 (6.5+20250216-1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5070 files and directories currently installed.)
Preparing to unpack .../login.defs_1%3a4.17.2-5_all.deb ...
Unpacking login.defs (1:4.17.2-5) over (1:4.16.0-7) ...
Preparing to unpack .../libsemanage-common_3.8-1_all.deb ...
Unpacking libsemanage-common (3.8-1) over (3.7-2.1) ...
Preparing to unpack .../libsemanage2_3.8-1_amd64.deb ...
Unpacking libsemanage2:amd64 (3.8-1) over (3.7-2.1+b1) ...
Preparing to unpack .../passwd_1%3a4.17.2-5_amd64.deb ...
Unpacking passwd (1:4.17.2-5) over (1:4.16.0-7) ...
Setting up login.defs (1:4.17.2-5) ...
Setting up libsemanage-common (3.8-1) ...
Setting up mount (2.40.4-4) ...
Setting up libsemanage2:amd64 (3.8-1) ...
Setting up login (1:4.16.0-2+really2.40.4-4) ...
Setting up passwd (1:4.17.2-5) ...
Processing triggers for libc-bin (2.40-7) ...
Processing triggers for debianutils (5.21) ...
0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-yf', 'dist-upgrade']
0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'sh', '-c', 'apt-cache dumpavail | md5sum']
0m8.0s DUMP:
2b7c68ddae4fd6c8a28e24dcbff5cf5f -
0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'sh', '-c', 'apt-cache dumpavail | md5sum']
0m8.0s INFO: Running scripts post_setup
0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_dummy_users']
0m8.7s DUMP:
useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999
useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999
useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999
useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999
useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999
useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999
useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999
useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999
useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999
useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999
useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999
0m8.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_dummy_users']
0m8.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_forbid_home']
0m8.8s DUMP:
Disabling /home
Adding 'local diversion of /home to /home.distrib'
0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_forbid_home']
0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_force-unsafe-io']
0m8.8s DUMP:
Enabling dpkg --force-unsafe-io.
Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib'
Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged'
'/bin/sync' -> 'true'
0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_force-unsafe-io']
0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_minimize']
0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_minimize']
0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_squeeze-backports']
0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_squeeze-backports']
0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_zz_backports']
0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_setup_zz_backports']
0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
0m8.8s DUMP:
install ok installed apt apt 2.9.30
install ok installed base-files base-files 13.6
install ok installed base-passwd base-passwd 3.6.6
install ok installed bash bash 5.2.37-1.1
install ok installed bsdutils bsdutils 1:2.40.4-4
install ok installed coreutils coreutils 9.5-1+b1
install ok installed dash dash 0.5.12-12
install ok installed debconf debconf 1.5.89
install ok installed debian-archive-keyring debian-archive-keyring 2023.4
install ok installed debianutils debianutils 5.21
install ok installed diffutils diffutils 1:3.10-2
install ok installed dpkg dpkg 1.22.15
install ok installed e2fsprogs e2fsprogs 1.47.2-1
install ok installed findutils findutils 4.10.0-3
install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-16
install ok installed grep grep 3.11-4
install ok installed gzip gzip 1.13-1
install ok installed hostname hostname 3.25
install ok installed init-system-helpers init-system-helpers 1.68
install ok installed libacl1:amd64 libacl1 2.3.2-2+b1
install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.29
install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 2.9.30
install ok installed libattr1:amd64 libattr1 1:2.5.2-3
install ok installed libaudit-common libaudit-common 1:4.0.2-2
install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2+b1
install ok installed libblkid1:amd64 libblkid1 2.40.4-4
install ok installed libbsd0:amd64 libbsd0 0.12.2-2
install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6
install ok installed libc-bin libc-bin 2.40-7
install ok installed libc6:amd64 libc6 2.40-7
install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4
install ok installed libcap2:amd64 libcap2 1:2.66-5+b1
install ok installed libcom-err2:amd64 libcom-err2 1.47.2-1
install ok installed libcrypt1:amd64 libcrypt1 1:4.4.38-1
install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9
install ok installed libdebconfclient0:amd64 libdebconfclient0 0.277
install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2-1
install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-16
install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3
install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.1-1
install ok installed liblz4-1:amd64 liblz4-1 1.10.0-3
install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1
install ok installed libmd0:amd64 libmd0 1.1.0-2+b1
install ok installed libmount1:amd64 libmount1 2.40.4-4
install ok installed libnettle8t64:amd64 libnettle8t64 3.10.1-1
install ok installed libpam-modules:amd64 libpam-modules 1.7.0-3
install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-3
install ok installed libpam-runtime libpam-runtime 1.7.0-3
install ok installed libpam0g:amd64 libpam0g 1.7.0-3
install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.45-1
install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2
install ok installed libselinux1:amd64 libselinux1 3.8-3
install ok installed libsemanage-common libsemanage-common 3.8-1
install ok installed libsemanage2:amd64 libsemanage2 3.8-1
install ok installed libsepol2:amd64 libsepol2 3.8-1
install ok installed libsmartcols1:amd64 libsmartcols1 2.40.4-4
install ok installed libss2:amd64 libss2 1.47.2-1
install ok installed libssl3t64:amd64 libssl3t64 3.4.1-1
install ok installed libstdc++6:amd64 libstdc++6 14.2.0-16
install ok installed libsystemd0:amd64 libsystemd0 257.3-1
install ok installed libtinfo6:amd64 libtinfo6 6.5+20250216-1
install ok installed libudev1:amd64 libudev1 257.3-1
install ok installed libuuid1:amd64 libuuid1 2.40.4-4
install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2
install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-2
install ok installed login login 1:4.16.0-2+really2.40.4-4
install ok installed login.defs login.defs 1:4.17.2-5
install ok installed logsave logsave 1.47.2-1
install ok installed mawk mawk 1.3.4.20250131-1
install ok installed mount mount 2.40.4-4
install ok installed ncurses-base ncurses-base 6.5+20250216-1
install ok installed ncurses-bin ncurses-bin 6.5+20250216-1
install ok installed openssl-provider-legacy openssl-provider-legacy 3.4.1-1
install ok installed passwd passwd 1:4.17.2-5
install ok installed perl-base perl-base 5.40.1-2
install ok installed sed sed 4.9-2
install ok installed sqv sqv 1.2.1-6+b1
install ok installed sysvinit-utils sysvinit-utils 3.14-1
install ok installed tar tar 1.35+dfsg-3.1
install ok installed tzdata tzdata 2025a-2
install ok installed usr-is-merged usr-is-merged 39+nmu2
install ok installed util-linux util-linux 2.40.4-4
install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1
0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
0m8.8s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat
0m8.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m9.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m9.2s INFO: Running scripts is_testable
0m9.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/is_testable_uninstallable']
0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/is_testable_uninstallable']
0m9.3s INFO: Running scripts pre_test
0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_test_exceptions']
0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_test_exceptions']
0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_test_root_password']
0m9.3s DUMP:
New password: Retype new password: passwd: password updated successfully
0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_test_root_password']
0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'show', '--no-all-versions', 'python3-freesasa']
0m9.6s DUMP:
Package: python3-freesasa
Source: python-freesasa (2.1.0-3)
Version: 2.1.0-3+b4
Installed-Size: 965
Maintainer: Debian Python Team <team+python@tracker.debian.org>
Architecture: amd64
Depends: python3 (<< 3.14), python3 (>= 3.12~), libc6 (>= 2.34), libjson-c5 (>= 0.15), libxml2 (>= 2.7.4)
Suggests: python-freesasa-doc
Description-en: Python bindings for FreeSASA (Python 3)
The module provides Python bindings for the FreeSASA library. FreeSASA
calculates Solvent Accessible Surface Area (SASA) of biomolecules. By default,
Lee & Richards' algorithm is used, but Shrake & Rupley's is also available.
Both can be parameterized to arbitrary precision, and for high resolution
versions of the algorithms, the calculations give identical results.
.
This package installs the library for Python 3.
Description-md5: 94a8fd39351b5d254343bf7e7b94e256
Homepage: https://freesasa.github.io/python/
Section: python
Priority: optional
Filename: pool/main/p/python-freesasa/python3-freesasa_2.1.0-3+b4_amd64.deb
Size: 200256
MD5sum: 421a6b8b75b1ab8c7c90ea03cd2fca69
SHA256: c0f4b187b6bd4ec615af2bb83cc326a56a4763610489e7abc307d11651097315
0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'show', '--no-all-versions', 'python3-freesasa']
0m9.6s INFO: apt-cache knows about the following packages: python3-freesasa
0m9.6s INFO: Running scripts pre_install
0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_database-server']
0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_database-server']
0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_exceptions']
0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_exceptions']
0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_extras']
0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_extras']
0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture']
0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture']
0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy']
0m9.8s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian trixie/main amd64 Packages
release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
0m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy']
0m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy', 'python3-freesasa']
0m9.9s DUMP:
python3-freesasa:
Installed: (none)
Candidate: 2.1.0-3+b4
Version table:
2.1.0-3+b4 500
500 http://deb.debian.org/debian trixie/main amd64 Packages
0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy', 'python3-freesasa']
0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-y', 'install', 'python3-freesasa']
0m14.9s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
libexpat1 libffi8 libicu72 libjson-c5 libncursesw6 libpython3-stdlib
libpython3.13-minimal libpython3.13-stdlib libreadline8t64 libsqlite3-0
libxml2 media-types netbase python3 python3-minimal python3.13
python3.13-minimal readline-common
Suggested packages:
python3-doc python3-tk python3-venv python-freesasa-doc python3.13-venv
python3.13-doc binutils binfmt-support readline-doc
Recommended packages:
libgpm2 ca-certificates
The following NEW packages will be installed:
libexpat1 libffi8 libicu72 libjson-c5 libncursesw6 libpython3-stdlib
libpython3.13-minimal libpython3.13-stdlib libreadline8t64 libsqlite3-0
libxml2 media-types netbase python3 python3-freesasa python3-minimal
python3.13 python3.13-minimal readline-common
0 upgraded, 19 newly installed, 0 to remove and 0 not upgraded.
Need to get 17.7 MB of archives.
After this operation, 66.7 MB of additional disk space will be used.
Get:1 http://deb.debian.org/debian trixie/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB]
Get:2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB]
Get:3 http://deb.debian.org/debian trixie/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB]
Get:4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.13.2-1 [27.1 kB]
Get:5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB]
Get:6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB]
Get:7 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB]
Get:8 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5+20250216-1 [136 kB]
Get:9 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-6 [69.4 kB]
Get:10 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-6 [169 kB]
Get:11 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB]
Get:12 http://deb.debian.org/debian trixie/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB]
Get:13 http://deb.debian.org/debian trixie/main amd64 python3.13 amd64 3.13.2-1 [745 kB]
Get:14 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.13.2-1 [10.0 kB]
Get:15 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.13.2-1 [28.1 kB]
Get:16 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-6 [9421 kB]
Get:17 http://deb.debian.org/debian trixie/main amd64 libjson-c5 amd64 0.18+ds-1 [46.0 kB]
Get:18 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB]
Get:19 http://deb.debian.org/debian trixie/main amd64 python3-freesasa amd64 2.1.0-3+b4 [200 kB]
Fetched 17.7 MB in 0s (109 MB/s)
Selecting previously unselected package libpython3.13-minimal:amd64.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5070 files and directories currently installed.)
Preparing to unpack .../libpython3.13-minimal_3.13.2-1_amd64.deb ...
Unpacking libpython3.13-minimal:amd64 (3.13.2-1) ...
Selecting previously unselected package libexpat1:amd64.
Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ...
Unpacking libexpat1:amd64 (2.6.4-1) ...
Selecting previously unselected package python3.13-minimal.
Preparing to unpack .../python3.13-minimal_3.13.2-1_amd64.deb ...
Unpacking python3.13-minimal (3.13.2-1) ...
Setting up libpython3.13-minimal:amd64 (3.13.2-1) ...
Setting up libexpat1:amd64 (2.6.4-1) ...
Setting up python3.13-minimal (3.13.2-1) ...
Selecting previously unselected package python3-minimal.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5404 files and directories currently installed.)
Preparing to unpack .../00-python3-minimal_3.13.2-1_amd64.deb ...
Unpacking python3-minimal (3.13.2-1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../01-media-types_10.1.0_all.deb ...
Unpacking media-types (10.1.0) ...
Selecting previously unselected package netbase.
Preparing to unpack .../02-netbase_6.4_all.deb ...
Unpacking netbase (6.4) ...
Selecting previously unselected package libffi8:amd64.
Preparing to unpack .../03-libffi8_3.4.7-1_amd64.deb ...
Unpacking libffi8:amd64 (3.4.7-1) ...
Selecting previously unselected package libncursesw6:amd64.
Preparing to unpack .../04-libncursesw6_6.5+20250216-1_amd64.deb ...
Unpacking libncursesw6:amd64 (6.5+20250216-1) ...
Selecting previously unselected package readline-common.
Preparing to unpack .../05-readline-common_8.2-6_all.deb ...
Unpacking readline-common (8.2-6) ...
Selecting previously unselected package libreadline8t64:amd64.
Preparing to unpack .../06-libreadline8t64_8.2-6_amd64.deb ...
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Unpacking libreadline8t64:amd64 (8.2-6) ...
Selecting previously unselected package libsqlite3-0:amd64.
Preparing to unpack .../07-libsqlite3-0_3.46.1-1_amd64.deb ...
Unpacking libsqlite3-0:amd64 (3.46.1-1) ...
Selecting previously unselected package libpython3.13-stdlib:amd64.
Preparing to unpack .../08-libpython3.13-stdlib_3.13.2-1_amd64.deb ...
Unpacking libpython3.13-stdlib:amd64 (3.13.2-1) ...
Selecting previously unselected package python3.13.
Preparing to unpack .../09-python3.13_3.13.2-1_amd64.deb ...
Unpacking python3.13 (3.13.2-1) ...
Selecting previously unselected package libpython3-stdlib:amd64.
Preparing to unpack .../10-libpython3-stdlib_3.13.2-1_amd64.deb ...
Unpacking libpython3-stdlib:amd64 (3.13.2-1) ...
Setting up python3-minimal (3.13.2-1) ...
Selecting previously unselected package python3.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5916 files and directories currently installed.)
Preparing to unpack .../python3_3.13.2-1_amd64.deb ...
Unpacking python3 (3.13.2-1) ...
Selecting previously unselected package libicu72:amd64.
Preparing to unpack .../libicu72_72.1-6_amd64.deb ...
Unpacking libicu72:amd64 (72.1-6) ...
Selecting previously unselected package libjson-c5:amd64.
Preparing to unpack .../libjson-c5_0.18+ds-1_amd64.deb ...
Unpacking libjson-c5:amd64 (0.18+ds-1) ...
Selecting previously unselected package libxml2:amd64.
Preparing to unpack .../libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ...
Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Selecting previously unselected package python3-freesasa.
Preparing to unpack .../python3-freesasa_2.1.0-3+b4_amd64.deb ...
Unpacking python3-freesasa (2.1.0-3+b4) ...
Setting up media-types (10.1.0) ...
Setting up libicu72:amd64 (72.1-6) ...
Setting up libsqlite3-0:amd64 (3.46.1-1) ...
Setting up libncursesw6:amd64 (6.5+20250216-1) ...
Setting up libffi8:amd64 (3.4.7-1) ...
Setting up netbase (6.4) ...
Setting up libjson-c5:amd64 (0.18+ds-1) ...
Setting up readline-common (8.2-6) ...
Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Setting up libreadline8t64:amd64 (8.2-6) ...
Setting up libpython3.13-stdlib:amd64 (3.13.2-1) ...
Setting up libpython3-stdlib:amd64 (3.13.2-1) ...
Setting up python3.13 (3.13.2-1) ...
Setting up python3 (3.13.2-1) ...
Setting up python3-freesasa (2.1.0-3+b4) ...
Processing triggers for libc-bin (2.40-7) ...
0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-y', 'install', 'python3-freesasa']
0m14.9s INFO: Running scripts post_install
0m14.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_install_exceptions']
0m14.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_install_exceptions']
0m14.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m15.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m15.2s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp8jaevgnh to sid
0m15.2s DEBUG: sources.list:
deb http://deb.debian.org/debian/ sid main
0m15.2s INFO: Running scripts pre_distupgrade
0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_allow_unauthenticated']
0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_allow_unauthenticated']
0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_exceptions']
0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_exceptions']
0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386']
0m15.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386']
0m15.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_zz_database-server']
0m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_zz_database-server']
0m15.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_zz_upgrade_early']
0m15.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_distupgrade_zz_upgrade_early']
0m15.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', 'update']
0m17.9s DUMP:
Get:1 http://deb.debian.org/debian sid InRelease [205 kB]
Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.1 MB]
Get:3 http://deb.debian.org/debian sid/main Translation-en [7380 kB]
Fetched 17.7 MB in 2s (9375 kB/s)
Reading package lists...
0m17.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', 'update']
0m17.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-yf', 'dist-upgrade']
0m20.5s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
Calculating upgrade...
The following packages will be upgraded:
bsdutils gcc-14-base libblkid1 libcap2 libgcc-s1 libmount1 libseccomp2
libselinux1 libsemanage2 libsmartcols1 libstdc++6 libuuid1 login login.defs
media-types mount passwd python3-freesasa sysvinit-utils util-linux
20 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Need to get 4822 kB of archives.
After this operation, 544 kB disk space will be freed.
Get:1 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.40.4-5 [106 kB]
Get:2 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.40.4-5 [36.5 kB]
Get:3 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.40.4-5 [169 kB]
Get:4 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.40.4-5 [200 kB]
Get:5 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.40.4-5 [140 kB]
Get:6 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.40.4-5 [1205 kB]
Get:7 http://deb.debian.org/debian sid/main amd64 mount amd64 2.40.4-5 [156 kB]
Get:8 http://deb.debian.org/debian sid/main amd64 libselinux1 amd64 3.8-4 [84.8 kB]
Get:9 http://deb.debian.org/debian sid/main amd64 sysvinit-utils amd64 3.14-3 [34.0 kB]
Get:10 http://deb.debian.org/debian sid/main amd64 login amd64 1:4.16.0-2+really2.40.4-5 [88.7 kB]
Get:11 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-17 [49.1 kB]
Get:12 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-17 [713 kB]
Get:13 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-17 [72.7 kB]
Get:14 http://deb.debian.org/debian sid/main amd64 libcap2 amd64 1:2.73-4 [27.3 kB]
Get:15 http://deb.debian.org/debian sid/main amd64 libseccomp2 amd64 2.5.5-2+b1 [48.1 kB]
Get:16 http://deb.debian.org/debian sid/main amd64 login.defs all 1:4.17.3-1 [186 kB]
Get:17 http://deb.debian.org/debian sid/main amd64 libsemanage2 amd64 3.8-1+b1 [94.7 kB]
Get:18 http://deb.debian.org/debian sid/main amd64 passwd amd64 1:4.17.3-1 [1227 kB]
Get:19 http://deb.debian.org/debian sid/main amd64 media-types all 12.0.0 [28.9 kB]
Get:20 http://deb.debian.org/debian sid/main amd64 python3-freesasa amd64 2.1.0-3+b5 [156 kB]
Fetched 4822 kB in 0s (60.6 MB/s)
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../bsdutils_1%3a2.40.4-5_amd64.deb ...
Unpacking bsdutils (1:2.40.4-5) over (1:2.40.4-4) ...
Setting up bsdutils (1:2.40.4-5) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../libuuid1_2.40.4-5_amd64.deb ...
Unpacking libuuid1:amd64 (2.40.4-5) over (2.40.4-4) ...
Setting up libuuid1:amd64 (2.40.4-5) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../libblkid1_2.40.4-5_amd64.deb ...
Unpacking libblkid1:amd64 (2.40.4-5) over (2.40.4-4) ...
Setting up libblkid1:amd64 (2.40.4-5) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../libmount1_2.40.4-5_amd64.deb ...
Unpacking libmount1:amd64 (2.40.4-5) over (2.40.4-4) ...
Setting up libmount1:amd64 (2.40.4-5) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../libsmartcols1_2.40.4-5_amd64.deb ...
Unpacking libsmartcols1:amd64 (2.40.4-5) over (2.40.4-4) ...
Setting up libsmartcols1:amd64 (2.40.4-5) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../util-linux_2.40.4-5_amd64.deb ...
Unpacking util-linux (2.40.4-5) over (2.40.4-4) ...
Setting up util-linux (2.40.4-5) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../mount_2.40.4-5_amd64.deb ...
Unpacking mount (2.40.4-5) over (2.40.4-4) ...
Preparing to unpack .../libselinux1_3.8-4_amd64.deb ...
Unpacking libselinux1:amd64 (3.8-4) over (3.8-3) ...
Setting up libselinux1:amd64 (3.8-4) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../sysvinit-utils_3.14-3_amd64.deb ...
Unpacking sysvinit-utils (3.14-3) over (3.14-1) ...
Setting up sysvinit-utils (3.14-3) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../login_1%3a4.16.0-2+really2.40.4-5_amd64.deb ...
Unpacking login (1:4.16.0-2+really2.40.4-5) over (1:4.16.0-2+really2.40.4-4) ...
Preparing to unpack .../gcc-14-base_14.2.0-17_amd64.deb ...
Unpacking gcc-14-base:amd64 (14.2.0-17) over (14.2.0-16) ...
Setting up gcc-14-base:amd64 (14.2.0-17) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../libstdc++6_14.2.0-17_amd64.deb ...
Unpacking libstdc++6:amd64 (14.2.0-17) over (14.2.0-16) ...
Setting up libstdc++6:amd64 (14.2.0-17) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../libgcc-s1_14.2.0-17_amd64.deb ...
Unpacking libgcc-s1:amd64 (14.2.0-17) over (14.2.0-16) ...
Setting up libgcc-s1:amd64 (14.2.0-17) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../libcap2_1%3a2.73-4_amd64.deb ...
Unpacking libcap2:amd64 (1:2.73-4) over (1:2.66-5+b1) ...
Setting up libcap2:amd64 (1:2.73-4) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5982 files and directories currently installed.)
Preparing to unpack .../libseccomp2_2.5.5-2+b1_amd64.deb ...
Unpacking libseccomp2:amd64 (2.5.5-2+b1) over (2.5.5-2) ...
Setting up libseccomp2:amd64 (2.5.5-2+b1) ...
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Preparing to unpack .../login.defs_1%3a4.17.3-1_all.deb ...
Unpacking login.defs (1:4.17.3-1) over (1:4.17.2-5) ...
Preparing to unpack .../libsemanage2_3.8-1+b1_amd64.deb ...
Unpacking libsemanage2:amd64 (3.8-1+b1) over (3.8-1) ...
Preparing to unpack .../passwd_1%3a4.17.3-1_amd64.deb ...
Unpacking passwd (1:4.17.3-1) over (1:4.17.2-5) ...
Preparing to unpack .../media-types_12.0.0_all.deb ...
Unpacking media-types (12.0.0) over (10.1.0) ...
Preparing to unpack .../python3-freesasa_2.1.0-3+b5_amd64.deb ...
Unpacking python3-freesasa (2.1.0-3+b5) over (2.1.0-3+b4) ...
Setting up media-types (12.0.0) ...
Installing new version of config file /etc/mime.types ...
Setting up login.defs (1:4.17.3-1) ...
Setting up python3-freesasa (2.1.0-3+b5) ...
Setting up mount (2.40.4-5) ...
Setting up libsemanage2:amd64 (3.8-1+b1) ...
Setting up login (1:4.16.0-2+really2.40.4-5) ...
Setting up passwd (1:4.17.3-1) ...
Processing triggers for libc-bin (2.40-7) ...
0m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-yf', 'dist-upgrade']
0m20.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'sh', '-c', 'apt-cache dumpavail | md5sum']
0m20.9s DUMP:
af70a70f294ee3f13d7d41368ee5bbaf -
0m20.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'sh', '-c', 'apt-cache dumpavail | md5sum']
0m20.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'show', '--no-all-versions', 'python3-freesasa']
0m21.2s DUMP:
Package: python3-freesasa
Source: python-freesasa (2.1.0-3)
Version: 2.1.0-3+b5
Installed-Size: 505
Maintainer: Debian Python Team <team+python@tracker.debian.org>
Architecture: amd64
Depends: python3 (<< 3.14), python3 (>= 3.13~), libc6 (>= 2.34), libjson-c5 (>= 0.15), libxml2 (>= 2.7.4)
Suggests: python-freesasa-doc
Description-en: Python bindings for FreeSASA (Python 3)
The module provides Python bindings for the FreeSASA library. FreeSASA
calculates Solvent Accessible Surface Area (SASA) of biomolecules. By default,
Lee & Richards' algorithm is used, but Shrake & Rupley's is also available.
Both can be parameterized to arbitrary precision, and for high resolution
versions of the algorithms, the calculations give identical results.
.
This package installs the library for Python 3.
Description-md5: 94a8fd39351b5d254343bf7e7b94e256
Homepage: https://freesasa.github.io/python/
Section: python
Priority: optional
Filename: pool/main/p/python-freesasa/python3-freesasa_2.1.0-3+b5_amd64.deb
Size: 155764
MD5sum: 621efe87c5628982f11b4ef95c2c438b
SHA256: d5bd327c2f62bbb0de21dcfc2ff83bf5a265afb916a1c516ace099cc5907d213
0m21.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'show', '--no-all-versions', 'python3-freesasa']
0m21.2s INFO: apt-cache knows about the following packages: python3-freesasa
0m21.2s INFO: Running scripts pre_install
0m21.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_database-server']
0m21.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_database-server']
0m21.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_exceptions']
0m21.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_exceptions']
0m21.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_extras']
0m21.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_extras']
0m21.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture']
0m21.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture']
0m21.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m21.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m21.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy']
0m21.4s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian sid/main amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
0m21.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy']
0m21.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy', 'python3-freesasa']
0m21.4s DUMP:
python3-freesasa:
Installed: 2.1.0-3+b5
Candidate: 2.1.0-3+b5
Version table:
*** 2.1.0-3+b5 500
500 http://deb.debian.org/debian sid/main amd64 Packages
100 /var/lib/dpkg/status
0m21.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy', 'python3-freesasa']
0m21.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-y', 'install', 'python3-freesasa']
0m21.9s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
python3-freesasa is already the newest version (2.1.0-3+b5).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
0m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-y', 'install', 'python3-freesasa']
0m21.9s INFO: Running scripts post_install
0m21.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_install_exceptions']
0m22.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_install_exceptions']
0m22.0s INFO: Running scripts post_distupgrade
0m22.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_base_cleanup']
0m22.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_base_cleanup']
0m22.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_exceptions']
0m22.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_exceptions']
0m22.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_force-unsafe-io']
0m22.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_force-unsafe-io']
0m22.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_squeeze-backports']
0m22.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_squeeze-backports']
0m22.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_zz_backports']
0m22.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_distupgrade_zz_backports']
0m22.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m22.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m22.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m23.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m23.1s INFO: Running scripts pre_install
0m23.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_database-server']
0m23.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_database-server']
0m23.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_exceptions']
0m23.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_exceptions']
0m23.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_extras']
0m23.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_extras']
0m23.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture']
0m23.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture']
0m23.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m23.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_install_foreign_architecture_i386']
0m23.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy']
0m23.2s DUMP:
Package files:
100 /var/lib/dpkg/status
release a=now
500 http://deb.debian.org/debian sid/main amd64 Packages
release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64
origin deb.debian.org
Pinned packages:
0m23.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy']
0m23.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy', 'python3-freesasa']
0m23.2s DUMP:
python3-freesasa:
Installed: 2.1.0-3+b5
Candidate: 2.1.0-3+b5
Version table:
*** 2.1.0-3+b5 500
500 http://deb.debian.org/debian sid/main amd64 Packages
100 /var/lib/dpkg/status
0m23.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-cache', 'policy', 'python3-freesasa']
0m23.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-y', 'install', 'python3-freesasa=2.1.0-3+b5']
0m24.0s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
python3-freesasa is already the newest version (2.1.0-3+b5).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', '-y', 'install', 'python3-freesasa=2.1.0-3+b5']
0m24.0s INFO: Running scripts post_install
0m24.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_install_exceptions']
0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_install_exceptions']
0m24.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m24.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m25.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', '-ac', '--ignore-obsolete']
0m26.3s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', '-ac', '--ignore-obsolete']
0m26.3s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate']
0m26.3s DUMP:
0.15.6
0m26.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate']
0m26.3s INFO: Running adequate version 0.15.6 now.
0m26.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'python3-freesasa']
0m26.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'python3-freesasa']
0m26.4s INFO: Running scripts pre_remove
0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_40_find_missing_md5sums']
0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_40_find_missing_md5sums']
0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles']
0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles']
0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_40_find_unowned_lib_links']
0m26.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_40_find_unowned_lib_links']
0m26.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_50_find_bad_permissions']
0m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_50_find_bad_permissions']
0m27.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_50_find_missing_copyright']
0m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_50_find_missing_copyright']
0m27.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_exceptions']
0m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/pre_remove_exceptions']
0m27.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
0m27.0s DUMP:
install ok installed apt apt 2.9.30
install ok installed base-files base-files 13.6
install ok installed base-passwd base-passwd 3.6.6
install ok installed bash bash 5.2.37-1.1
install ok installed bsdutils bsdutils 1:2.40.4-5
install ok installed coreutils coreutils 9.5-1+b1
install ok installed dash dash 0.5.12-12
install ok installed debconf debconf 1.5.89
install ok installed debian-archive-keyring debian-archive-keyring 2023.4
install ok installed debianutils debianutils 5.21
install ok installed diffutils diffutils 1:3.10-2
install ok installed dpkg dpkg 1.22.15
install ok installed e2fsprogs e2fsprogs 1.47.2-1
install ok installed findutils findutils 4.10.0-3
install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-17
install ok installed grep grep 3.11-4
install ok installed gzip gzip 1.13-1
install ok installed hostname hostname 3.25
install ok installed init-system-helpers init-system-helpers 1.68
install ok installed libacl1:amd64 libacl1 2.3.2-2+b1
install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.29
install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 2.9.30
install ok installed libattr1:amd64 libattr1 1:2.5.2-3
install ok installed libaudit-common libaudit-common 1:4.0.2-2
install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2+b1
install ok installed libblkid1:amd64 libblkid1 2.40.4-5
install ok installed libbsd0:amd64 libbsd0 0.12.2-2
install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6
install ok installed libc-bin libc-bin 2.40-7
install ok installed libc6:amd64 libc6 2.40-7
install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4
install ok installed libcap2:amd64 libcap2 1:2.73-4
install ok installed libcom-err2:amd64 libcom-err2 1.47.2-1
install ok installed libcrypt1:amd64 libcrypt1 1:4.4.38-1
install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9
install ok installed libdebconfclient0:amd64 libdebconfclient0 0.277
install ok installed libexpat1:amd64 libexpat1 2.6.4-1
install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2-1
install ok installed libffi8:amd64 libffi8 3.4.7-1
install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-17
install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3
install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.1-1
install ok installed libicu72:amd64 libicu72 72.1-6
install ok installed libjson-c5:amd64 libjson-c5 0.18+ds-1
install ok installed liblz4-1:amd64 liblz4-1 1.10.0-3
install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1
install ok installed libmd0:amd64 libmd0 1.1.0-2+b1
install ok installed libmount1:amd64 libmount1 2.40.4-5
install ok installed libncursesw6:amd64 libncursesw6 6.5+20250216-1
install ok installed libnettle8t64:amd64 libnettle8t64 3.10.1-1
install ok installed libpam-modules:amd64 libpam-modules 1.7.0-3
install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-3
install ok installed libpam-runtime libpam-runtime 1.7.0-3
install ok installed libpam0g:amd64 libpam0g 1.7.0-3
install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.45-1
install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.13.2-1
install ok installed libpython3.13-minimal:amd64 libpython3.13-minimal 3.13.2-1
install ok installed libpython3.13-stdlib:amd64 libpython3.13-stdlib 3.13.2-1
install ok installed libreadline8t64:amd64 libreadline8t64 8.2-6
install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2+b1
install ok installed libselinux1:amd64 libselinux1 3.8-4
install ok installed libsemanage-common libsemanage-common 3.8-1
install ok installed libsemanage2:amd64 libsemanage2 3.8-1+b1
install ok installed libsepol2:amd64 libsepol2 3.8-1
install ok installed libsmartcols1:amd64 libsmartcols1 2.40.4-5
install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-1
install ok installed libss2:amd64 libss2 1.47.2-1
install ok installed libssl3t64:amd64 libssl3t64 3.4.1-1
install ok installed libstdc++6:amd64 libstdc++6 14.2.0-17
install ok installed libsystemd0:amd64 libsystemd0 257.3-1
install ok installed libtinfo6:amd64 libtinfo6 6.5+20250216-1
install ok installed libudev1:amd64 libudev1 257.3-1
install ok installed libuuid1:amd64 libuuid1 2.40.4-5
install ok installed libxml2:amd64 libxml2 2.12.7+dfsg+really2.9.14-0.2+b1
install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2
install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-2
install ok installed login login 1:4.16.0-2+really2.40.4-5
install ok installed login.defs login.defs 1:4.17.3-1
install ok installed logsave logsave 1.47.2-1
install ok installed mawk mawk 1.3.4.20250131-1
install ok installed media-types media-types 12.0.0
install ok installed mount mount 2.40.4-5
install ok installed ncurses-base ncurses-base 6.5+20250216-1
install ok installed ncurses-bin ncurses-bin 6.5+20250216-1
install ok installed netbase netbase 6.4
install ok installed openssl-provider-legacy openssl-provider-legacy 3.4.1-1
install ok installed passwd passwd 1:4.17.3-1
install ok installed perl-base perl-base 5.40.1-2
install ok installed python3 python3 3.13.2-1
install ok installed python3-freesasa python3-freesasa 2.1.0-3+b5
install ok installed python3-minimal python3-minimal 3.13.2-1
install ok installed python3.13 python3.13 3.13.2-1
install ok installed python3.13-minimal python3.13-minimal 3.13.2-1
install ok installed readline-common readline-common 8.2-6
install ok installed sed sed 4.9-2
install ok installed sqv sqv 1.2.1-6+b1
install ok installed sysvinit-utils sysvinit-utils 3.14-3
install ok installed tar tar 1.35+dfsg-3.1
install ok installed tzdata tzdata 2025a-2
install ok installed usr-is-merged usr-is-merged 39+nmu2
install ok installed util-linux util-linux 2.40.4-5
install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1
0m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n']
0m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', 'remove', 'libexpat1:amd64', 'libffi8:amd64', 'libicu72:amd64', 'libjson-c5:amd64', 'libncursesw6:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'libxml2:amd64', 'media-types', 'netbase', 'python3', 'python3-minimal', 'python3.13', 'python3.13-minimal', 'readline-common', 'python3-freesasa']
0m28.3s DUMP:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
libexpat1 libffi8 libicu72 libjson-c5 libncursesw6 libpython3-stdlib
libpython3.13-minimal libpython3.13-stdlib libreadline8t64 libsqlite3-0
libxml2 media-types netbase python3 python3-freesasa python3-minimal
python3.13 python3.13-minimal readline-common
0 upgraded, 0 newly installed, 19 to remove and 0 not upgraded.
After this operation, 66.2 MB disk space will be freed.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 5983 files and directories currently installed.)
Removing python3-freesasa (2.1.0-3+b5) ...
Removing python3 (3.13.2-1) ...
Removing python3-minimal (3.13.2-1) ...
Removing python3.13 (3.13.2-1) ...
Removing python3.13-minimal (3.13.2-1) ...
Removing libexpat1:amd64 (2.6.4-1) ...
Removing libpython3-stdlib:amd64 (3.13.2-1) ...
Removing libpython3.13-stdlib:amd64 (3.13.2-1) ...
find: '/usr/lib/python3': No such file or directory
Removing libffi8:amd64 (3.4.7-1) ...
Removing libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ...
Removing libicu72:amd64 (72.1-6) ...
Removing libjson-c5:amd64 (0.18+ds-1) ...
Removing libncursesw6:amd64 (6.5+20250216-1) ...
Removing libpython3.13-minimal:amd64 (3.13.2-1) ...
find: '/usr/lib/python3': No such file or directory
Removing libreadline8t64:amd64 (8.2-6) ...
Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
Removing libsqlite3-0:amd64 (3.46.1-1) ...
Removing media-types (12.0.0) ...
Removing netbase (6.4) ...
Removing readline-common (8.2-6) ...
Processing triggers for libc-bin (2.40-7) ...
0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', 'remove', 'libexpat1:amd64', 'libffi8:amd64', 'libicu72:amd64', 'libjson-c5:amd64', 'libncursesw6:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'libxml2:amd64', 'media-types', 'netbase', 'python3', 'python3-minimal', 'python3.13', 'python3.13-minimal', 'readline-common', 'python3-freesasa']
0m28.3s INFO: Running scripts post_remove
0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_remove_exceptions']
0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_remove_exceptions']
0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg', '--purge', 'libexpat1:amd64', 'libffi8:amd64', 'libicu72:amd64', 'libjson-c5:amd64', 'libncursesw6:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'libxml2:amd64', 'media-types', 'netbase', 'python3', 'python3-minimal', 'python3.13', 'python3.13-minimal', 'readline-common']
0m28.4s DUMP:
dpkg: warning: ignoring request to remove libexpat1 which isn't installed
dpkg: warning: ignoring request to remove libffi8 which isn't installed
dpkg: warning: ignoring request to remove libicu72 which isn't installed
dpkg: warning: ignoring request to remove libjson-c5 which isn't installed
dpkg: warning: ignoring request to remove libncursesw6 which isn't installed
dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed
(Reading database ... 5078 files and directories currently installed.)
Purging configuration files for libpython3.13-minimal:amd64 (3.13.2-1) ...
dpkg: warning: ignoring request to remove libpython3.13-stdlib which isn't installed
Purging configuration files for libreadline8t64:amd64 (8.2-6) ...
dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed
dpkg: warning: ignoring request to remove libxml2 which isn't installed
Purging configuration files for media-types (12.0.0) ...
Purging configuration files for netbase (6.4) ...
Purging configuration files for python3 (3.13.2-1) ...
dpkg: warning: ignoring request to remove python3-minimal which isn't installed
dpkg: warning: ignoring request to remove python3.13 which isn't installed
Purging configuration files for python3.13-minimal (3.13.2-1) ...
Purging configuration files for readline-common (8.2-6) ...
0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg', '--purge', 'libexpat1:amd64', 'libffi8:amd64', 'libicu72:amd64', 'libjson-c5:amd64', 'libncursesw6:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'libxml2:amd64', 'media-types', 'netbase', 'python3', 'python3-minimal', 'python3.13', 'python3.13-minimal', 'readline-common']
0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg', '--purge', 'python3-freesasa']
0m28.4s DUMP:
dpkg: warning: ignoring request to remove python3-freesasa which isn't installed
0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg', '--purge', 'python3-freesasa']
0m28.4s INFO: Running scripts post_purge
0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_purge_exceptions']
0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_purge_exceptions']
0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg', '--purge', '--pending']
0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg', '--purge', '--pending']
0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg', '--remove', '--pending']
0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg', '--remove', '--pending']
0m28.4s INFO: Running scripts post_test
0m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_test_exceptions']
0m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'tmp/scripts/post_test_exceptions']
0m28.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m28.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m28.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg-divert', '--list']
0m28.7s DUMP:
diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64
local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged
diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64
local diversion of /home to /home.distrib
diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6
diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64
diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64
diversion of /libx32 to /.libx32.usr-is-merged by base-files
local diversion of /usr/bin/sync to /usr/bin/sync.distrib
diversion of /lib32 to /.lib32.usr-is-merged by base-files
diversion of /libo32 to /.libo32.usr-is-merged by base-files
0m28.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'dpkg-divert', '--list']
0m28.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', 'clean']
0m28.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh', 'apt-get', 'clean']
0m28.8s DEBUG: Recording chroot state
0m29.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/shm']
0m29.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/shm']
0m29.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/console']
0m29.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/console']
0m29.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/ptmx']
0m29.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/ptmx']
0m29.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/pts']
0m29.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/dev/pts']
0m29.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/proc']
0m29.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh/proc']
0m29.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m29.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp8jaevgnh']
0m29.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp8jaevgnh
0m29.7s INFO: PASS: Upgrading between Debian distributions.
0m29.7s INFO: PASS: All tests.
0m29.7s INFO: piuparts run ends.
ret=0
End: 2025-02-26 23:10:09 GMT