Start: 2025-02-13 15:29:32 GMT [testing] Package: python3-gsd Source: python-gsd (3.3.0-1) Version: 3.3.0-1+b3 Installed-Size: 1806 Maintainer: Debichem Team Architecture: amd64 Depends: python3 (<< 3.14), python3 (>= 3.12~), python3-numpy (>= 1:1.19.0~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.14) Suggests: python-gsd-doc Breaks: python3-mdanalysis (<< 2.5.0+dfsg1-2~) Description: native file format for HOOMD-blue (Python 3 module) Homepage: https://gsd.readthedocs.io/ Description-md5: 2bd98f72a37f05d1d4a5ec147a0c5767 Section: python Priority: optional Filename: pool/main/p/python-gsd/python3-gsd_3.3.0-1+b3_amd64.deb Size: 230548 MD5sum: d481579875766ce3fa13dcf0db1a5d84 SHA256: 872ab4eafa0c5c9bd01cac9adca806d1f62778f2f8d990972d79757016ec39e1 [sid] Package: python3-gsd Source: python-gsd Version: 3.4.2-2 Installed-Size: 1848 Maintainer: Debichem Team Architecture: amd64 Depends: python3 (<< 3.14), python3 (>= 3.12~), python3-numpy (>= 1:1.19.0~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.14) Suggests: python-gsd-doc Breaks: python3-mdanalysis (<< 2.5.0+dfsg1-2~) Description: native file format for HOOMD-blue (Python 3 module) Homepage: https://gsd.readthedocs.io/ Description-md5: 2bd98f72a37f05d1d4a5ec147a0c5767 Section: python Priority: optional Filename: pool/main/p/python-gsd/python3-gsd_3.4.2-2_amd64.deb Size: 237904 MD5sum: 245320825c8a301b48ec04931e085584 SHA256: e53532d91662c2d98655fc2f55b68abcb7bcaaf3f3425879ae6fe5c3f7a74a83 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-gsd=3.4.2-2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-gsd=3.4.2-2 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpk7m7_xca 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpk7m7_xca 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/pts'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/pts'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/ptmx'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/6', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/console'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/6', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/console'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpk7m7_xca/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', 'update'] 0m2.4s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [175 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9435 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6319 kB] Fetched 15.9 MB in 1s (14.8 MB/s) Reading package lists... 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', 'update'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-yf', 'dist-upgrade'] 0m5.4s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: apt bsdutils dpkg gcc-14-base libapt-pkg6.0t64 libblkid1 libgcc-s1 libmount1 libsemanage2 libsmartcols1 libstdc++6 libtinfo6 libuuid1 login mount ncurses-base ncurses-bin sqv util-linux 19 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 8812 kB of archives. After this operation, 39.9 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.4-3 [106 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 gcc-14-base amd64 14.2.0-16 [48.9 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libgcc-s1 amd64 14.2.0-16 [72.8 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libstdc++6 amd64 14.2.0-16 [713 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libapt-pkg6.0t64 amd64 2.9.28 [1119 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 dpkg amd64 1.22.15 [1537 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 ncurses-bin amd64 6.5+20250125-2 [438 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.4-3 [36.3 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.4-3 [169 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.4-3 [200 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.4-3 [140 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.4-3 [1214 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.4-3 [155 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 sqv amd64 1.2.1-6+b1 [623 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 apt amd64 2.9.28 [1440 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 ncurses-base all 6.5+20250125-2 [273 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.4-3 [88.5 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 libtinfo6 amd64 6.5+20250125-2 [348 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 libsemanage2 amd64 3.7-2.1+b1 [91.9 kB] Fetched 8812 kB in 0s (97.3 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.4-3_amd64.deb ... Unpacking bsdutils (1:2.40.4-3) over (1:2.40.4-2) ... Setting up bsdutils (1:2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../gcc-14-base_14.2.0-16_amd64.deb ... Unpacking gcc-14-base:amd64 (14.2.0-16) over (14.2.0-12) ... Setting up gcc-14-base:amd64 (14.2.0-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14.2.0-16_amd64.deb ... Unpacking libgcc-s1:amd64 (14.2.0-16) over (14.2.0-12) ... Setting up libgcc-s1:amd64 (14.2.0-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../libstdc++6_14.2.0-16_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-16) over (14.2.0-12) ... Setting up libstdc++6:amd64 (14.2.0-16) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.28_amd64.deb ... Unpacking libapt-pkg6.0t64:amd64 (2.9.28) over (2.9.27) ... Setting up libapt-pkg6.0t64:amd64 (2.9.28) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../dpkg_1.22.15_amd64.deb ... Unpacking dpkg (1.22.15) over (1.22.14) ... Setting up dpkg (1.22.15) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.5+20250125-2_amd64.deb ... Unpacking ncurses-bin (6.5+20250125-2) over (6.5-2+b1) ... Setting up ncurses-bin (6.5+20250125-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5023 files and directories currently installed.) Preparing to unpack .../libuuid1_2.40.4-3_amd64.deb ... Unpacking libuuid1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libuuid1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5023 files and directories currently installed.) Preparing to unpack .../libblkid1_2.40.4-3_amd64.deb ... Unpacking libblkid1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libblkid1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5023 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.4-3_amd64.deb ... Unpacking libmount1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libmount1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5023 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.4-3_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.4-3) over (2.40.4-2) ... Setting up libsmartcols1:amd64 (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5023 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.4-3_amd64.deb ... Unpacking util-linux (2.40.4-3) over (2.40.4-2) ... Setting up util-linux (2.40.4-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5023 files and directories currently installed.) Preparing to unpack .../mount_2.40.4-3_amd64.deb ... Unpacking mount (2.40.4-3) over (2.40.4-2) ... Preparing to unpack .../sqv_1.2.1-6+b1_amd64.deb ... Unpacking sqv (1.2.1-6+b1) over (1.2.1-5) ... Setting up sqv (1.2.1-6+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.28_amd64.deb ... Unpacking apt (2.9.28) over (2.9.27) ... Setting up apt (2.9.28) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.5+20250125-2_all.deb ... Unpacking ncurses-base (6.5+20250125-2) over (6.5-2) ... Setting up ncurses-base (6.5+20250125-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5024 files and directories currently installed.) Preparing to unpack .../login_1%3a4.16.0-2+really2.40.4-3_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.4-3) over (1:4.16.0-2+really2.40.4-2) ... Preparing to unpack .../libtinfo6_6.5+20250125-2_amd64.deb ... Unpacking libtinfo6:amd64 (6.5+20250125-2) over (6.5-2+b1) ... Setting up libtinfo6:amd64 (6.5+20250125-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5023 files and directories currently installed.) Preparing to unpack .../libsemanage2_3.7-2.1+b1_amd64.deb ... Unpacking libsemanage2:amd64 (3.7-2.1+b1) over (3.7-2.1) ... Setting up mount (2.40.4-3) ... Setting up libsemanage2:amd64 (3.7-2.1+b1) ... Setting up login (1:4.16.0-2+really2.40.4-3) ... Processing triggers for libc-bin (2.40-6) ... 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-yf', 'dist-upgrade'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.5s DUMP: f4e90e5fc5715c6c13bbd5d4441409ee - 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.5s INFO: Running scripts post_setup 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_dummy_users'] 0m7.5s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_dummy_users'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_forbid_home'] 0m7.5s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_forbid_home'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.5s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_minimize'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_minimize'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_zz_backports'] 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_setup_zz_backports'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.5s DUMP: install ok installed apt apt 2.9.28 install ok installed base-files base-files 13.6 install ok installed base-passwd base-passwd 3.6.6 install ok installed bash bash 5.2.37-1 install ok installed bsdutils bsdutils 1:2.40.4-3 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.89 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.21 install ok installed diffutils diffutils 1:3.10-2 install ok installed dpkg dpkg 1.22.15 install ok installed e2fsprogs e2fsprogs 1.47.2-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-16 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.13-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.68 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.28 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.2-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2+b1 install ok installed libblkid1:amd64 libblkid1 2.40.4-3 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-6 install ok installed libc6:amd64 libc6 2.40-6 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.2-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.38-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.277 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-16 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-3 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.4-3 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-2 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-2 install ok installed libpam-runtime libpam-runtime 1.7.0-2 install ok installed libpam0g:amd64 libpam0g 1.7.0-2 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.44-5 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2 install ok installed libselinux1:amd64 libselinux1 3.7-3.1 install ok installed libsemanage-common libsemanage-common 3.7-2.1 install ok installed libsemanage2:amd64 libsemanage2 3.7-2.1+b1 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.4-3 install ok installed libss2:amd64 libss2 1.47.2-1 install ok installed libssl3t64:amd64 libssl3t64 3.4.0-2 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-16 install ok installed libsystemd0:amd64 libsystemd0 257.2-3 install ok installed libtinfo6:amd64 libtinfo6 6.5+20250125-2 install ok installed libudev1:amd64 libudev1 257.2-3 install ok installed libuuid1:amd64 libuuid1 2.40.4-3 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-2 install ok installed login login 1:4.16.0-2+really2.40.4-3 install ok installed login.defs login.defs 1:4.16.0-7 install ok installed logsave logsave 1.47.2-1 install ok installed mawk mawk 1.3.4.20250131-1 install ok installed mount mount 2.40.4-3 install ok installed ncurses-base ncurses-base 6.5+20250125-2 install ok installed ncurses-bin ncurses-bin 6.5+20250125-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.4.0-2 install ok installed passwd passwd 1:4.16.0-7 install ok installed perl-base perl-base 5.40.0-8 install ok installed sed sed 4.9-2 install ok installed sqv sqv 1.2.1-6+b1 install ok installed sysvinit-utils sysvinit-utils 3.13-1 install ok installed tar tar 1.35+dfsg-3.1 install ok installed tzdata tzdata 2024b-6 install ok installed usr-is-merged usr-is-merged 39+nmu2 install ok installed util-linux util-linux 2.40.4-3 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.5s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m7.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m8.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m8.0s INFO: Running scripts is_testable 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/is_testable_uninstallable'] 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/is_testable_uninstallable'] 0m8.0s INFO: Running scripts pre_test 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_test_exceptions'] 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_test_exceptions'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_test_root_password'] 0m8.2s DUMP: New password: Retype new password: passwd: password updated successfully 0m8.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_test_root_password'] 0m8.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'show', '--no-all-versions', 'python3-gsd'] 0m8.5s DUMP: Package: python3-gsd Source: python-gsd (3.3.0-1) Version: 3.3.0-1+b3 Installed-Size: 1806 Maintainer: Debichem Team Architecture: amd64 Depends: python3 (<< 3.14), python3 (>= 3.12~), python3-numpy (>= 1:1.19.0~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.14) Suggests: python-gsd-doc Breaks: python3-mdanalysis (<< 2.5.0+dfsg1-2~) Description-en: native file format for HOOMD-blue (Python 3 module) The GSD file format is the native file format for HOOMD-blue. GSD files store trajectories of the HOOMD-blue system state in a binary file with efficient random access to frames. GSD allows all particle and topology properties to vary from one frame to the next. Use the GSD Python API to specify the initial condition for a HOOMD-blue simulation or analyze trajectory output with a script. Read a GSD trajectory with a visualization tool to explore the behavior of the simulation. . This package installs the library to access GSD files from Python 3. Description-md5: 2bd98f72a37f05d1d4a5ec147a0c5767 Homepage: https://gsd.readthedocs.io/ Section: python Priority: optional Filename: pool/main/p/python-gsd/python3-gsd_3.3.0-1+b3_amd64.deb Size: 230548 MD5sum: d481579875766ce3fa13dcf0db1a5d84 SHA256: 872ab4eafa0c5c9bd01cac9adca806d1f62778f2f8d990972d79757016ec39e1 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'show', '--no-all-versions', 'python3-gsd'] 0m8.5s INFO: apt-cache knows about the following packages: python3-gsd 0m8.5s INFO: Running scripts pre_install 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_database-server'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_database-server'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_exceptions'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_exceptions'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_extras'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_extras'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy'] 0m8.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy', 'python3-gsd'] 0m8.6s DUMP: python3-gsd: Installed: (none) Candidate: 3.3.0-1+b3 Version table: 3.3.0-1+b3 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy', 'python3-gsd'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-y', 'install', 'python3-gsd'] 0m15.7s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: libblas3 libexpat1 libffi8 libgfortran5 liblapack3 libncursesw6 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libreadline8t64 libsqlite3-0 media-types netbase python3 python3-minimal python3-numpy python3.13 python3.13-minimal readline-common Suggested packages: python3-doc python3-tk python3-venv python-gsd-doc gcc gfortran python-numpy-doc python3-dev python3-pytest python3.13-venv python3.13-doc binutils binfmt-support readline-doc Recommended packages: libgpm2 ca-certificates The following NEW packages will be installed: libblas3 libexpat1 libffi8 libgfortran5 liblapack3 libncursesw6 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libreadline8t64 libsqlite3-0 media-types netbase python3 python3-gsd python3-minimal python3-numpy python3.13 python3.13-minimal readline-common 0 upgraded, 20 newly installed, 0 to remove and 0 not upgraded. Need to get 15.7 MB of archives. After this operation, 77.8 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 libpython3.13-minimal amd64 3.13.2-1 [859 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 python3.13-minimal amd64 3.13.2-1 [2205 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.13.1-2 [27.0 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 libffi8 amd64 3.4.6-1 [23.6 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5+20250125-2 [135 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-6 [69.4 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libpython3.13-stdlib amd64 3.13.2-1 [1979 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 python3.13 amd64 3.13.2-1 [745 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.13.1-2 [9952 B] Get:15 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.13.1-2 [28.0 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.1-2 [160 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-16 [836 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.1-2 [2452 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-13 [4736 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 python3-gsd amd64 3.3.0-1+b3 [231 kB] Fetched 15.7 MB in 0s (142 MB/s) Selecting previously unselected package libpython3.13-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5028 files and directories currently installed.) Preparing to unpack .../libpython3.13-minimal_3.13.2-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.2-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.2-1_amd64.deb ... Unpacking python3.13-minimal (3.13.2-1) ... Setting up libpython3.13-minimal:amd64 (3.13.2-1) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.13-minimal (3.13.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5362 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.13.1-2_amd64.deb ... Unpacking python3-minimal (3.13.1-2) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../03-libffi8_3.4.6-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.6-1) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../04-libncursesw6_6.5+20250125-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.5+20250125-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../05-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../06-libreadline8t64_8.2-6_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../07-libsqlite3-0_3.46.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.1-1) ... Selecting previously unselected package libpython3.13-stdlib:amd64. Preparing to unpack .../08-libpython3.13-stdlib_3.13.2-1_amd64.deb ... Unpacking libpython3.13-stdlib:amd64 (3.13.2-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../09-python3.13_3.13.2-1_amd64.deb ... Unpacking python3.13 (3.13.2-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../10-libpython3-stdlib_3.13.1-2_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.13.1-2) ... Setting up python3-minimal (3.13.1-2) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5874 files and directories currently installed.) Preparing to unpack .../0-python3_3.13.1-2_amd64.deb ... Unpacking python3 (3.13.1-2) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../1-libblas3_3.12.1-2_amd64.deb ... Unpacking libblas3:amd64 (3.12.1-2) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../2-libgfortran5_14.2.0-16_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-16) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../3-liblapack3_3.12.1-2_amd64.deb ... Unpacking liblapack3:amd64 (3.12.1-2) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../4-python3-numpy_1%3a1.26.4+ds-13_amd64.deb ... Unpacking python3-numpy (1:1.26.4+ds-13) ... Selecting previously unselected package python3-gsd. Preparing to unpack .../5-python3-gsd_3.3.0-1+b3_amd64.deb ... Unpacking python3-gsd (3.3.0-1+b3) ... Setting up media-types (10.1.0) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up libblas3:amd64 (3.12.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libncursesw6:amd64 (6.5+20250125-2) ... Setting up libgfortran5:amd64 (14.2.0-16) ... Setting up libffi8:amd64 (3.4.6-1) ... Setting up netbase (6.4) ... Setting up readline-common (8.2-6) ... Setting up liblapack3:amd64 (3.12.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libreadline8t64:amd64 (8.2-6) ... Setting up libpython3.13-stdlib:amd64 (3.13.2-1) ... Setting up libpython3-stdlib:amd64 (3.13.1-2) ... Setting up python3.13 (3.13.2-1) ... Setting up python3 (3.13.1-2) ... Setting up python3-numpy (1:1.26.4+ds-13) ... Setting up python3-gsd (3.3.0-1+b3) ... Processing triggers for libc-bin (2.40-6) ... 0m15.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-y', 'install', 'python3-gsd'] 0m15.7s INFO: Running scripts post_install 0m15.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_install_exceptions'] 0m15.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_install_exceptions'] 0m15.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m16.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m16.1s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpk7m7_xca to sid 0m16.1s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m16.1s INFO: Running scripts pre_distupgrade 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_exceptions'] 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_exceptions'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m16.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m16.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', 'update'] 0m20.0s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [205 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.1 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7368 kB] Fetched 17.7 MB in 3s (5534 kB/s) Reading package lists... 0m20.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', 'update'] 0m20.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-yf', 'dist-upgrade'] 0m25.5s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: python3-numpy-dev The following packages will be upgraded: gcc-14-base libffi8 libgcc-s1 libgfortran5 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libselinux1 libsepol2 libssl3t64 libstdc++6 media-types openssl-provider-legacy python3-gsd python3-numpy sysvinit-utils tzdata 19 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 13.7 MB of archives. After this operation, 7618 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 sysvinit-utils amd64 3.14-1 [33.3 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libpam-runtime all 1.7.0-3 [248 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libpam0g amd64 1.7.0-3 [69.7 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libpcre2-8-0 amd64 10.45-1 [298 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libselinux1 amd64 3.8-3 [84.6 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libpam-modules-bin amd64 1.7.0-3 [48.9 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libpam-modules amd64 1.7.0-3 [177 kB] Get:8 http://deb.debian.org/debian sid/main amd64 gcc-14-base amd64 14.2.0-17 [49.1 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 14.2.0-17 [713 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 14.2.0-17 [836 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 14.2.0-17 [72.7 kB] Get:12 http://deb.debian.org/debian sid/main amd64 openssl-provider-legacy amd64 3.4.1-1 [302 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libssl3t64 amd64 3.4.1-1 [2304 kB] Get:14 http://deb.debian.org/debian sid/main amd64 tzdata all 2025a-2 [259 kB] Get:15 http://deb.debian.org/debian sid/main amd64 media-types all 11.0.0 [27.6 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libsepol2 amd64 3.8-1 [296 kB] Get:18 http://deb.debian.org/debian sid/main amd64 python3-gsd amd64 3.4.2-2 [238 kB] Get:19 http://deb.debian.org/debian sid/main amd64 python3-numpy amd64 1:2.2.2+ds-2 [7507 kB] Get:20 http://deb.debian.org/debian sid/main amd64 python3-numpy-dev amd64 1:2.2.2+ds-2 [138 kB] Preconfiguring packages ... Fetched 13.7 MB in 0s (116 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.14-1_amd64.deb ... Unpacking sysvinit-utils (3.14-1) over (3.13-1) ... Setting up sysvinit-utils (3.14-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../libpam-runtime_1.7.0-3_all.deb ... Unpacking libpam-runtime (1.7.0-3) over (1.7.0-2) ... Setting up libpam-runtime (1.7.0-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../libpam0g_1.7.0-3_amd64.deb ... Unpacking libpam0g:amd64 (1.7.0-3) over (1.7.0-2) ... Setting up libpam0g:amd64 (1.7.0-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.45-1_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.45-1) over (10.44-5) ... Setting up libpcre2-8-0:amd64 (10.45-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../libselinux1_3.8-3_amd64.deb ... Unpacking libselinux1:amd64 (3.8-3) over (3.7-3.1) ... Setting up libselinux1:amd64 (3.8-3) ... /var/lib/dpkg/info/libselinux1:amd64.postinst: 6: sestatus: not found (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../libpam-modules-bin_1.7.0-3_amd64.deb ... Unpacking libpam-modules-bin (1.7.0-3) over (1.7.0-2) ... Setting up libpam-modules-bin (1.7.0-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../libpam-modules_1.7.0-3_amd64.deb ... Unpacking libpam-modules:amd64 (1.7.0-3) over (1.7.0-2) ... Setting up libpam-modules:amd64 (1.7.0-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../gcc-14-base_14.2.0-17_amd64.deb ... Unpacking gcc-14-base:amd64 (14.2.0-17) over (14.2.0-16) ... Setting up gcc-14-base:amd64 (14.2.0-17) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../libstdc++6_14.2.0-17_amd64.deb ... Unpacking libstdc++6:amd64 (14.2.0-17) over (14.2.0-16) ... Setting up libstdc++6:amd64 (14.2.0-17) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../libgfortran5_14.2.0-17_amd64.deb ... Unpacking libgfortran5:amd64 (14.2.0-17) over (14.2.0-16) ... Preparing to unpack .../libgcc-s1_14.2.0-17_amd64.deb ... Unpacking libgcc-s1:amd64 (14.2.0-17) over (14.2.0-16) ... Setting up libgcc-s1:amd64 (14.2.0-17) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../openssl-provider-legacy_3.4.1-1_amd64.deb ... Unpacking openssl-provider-legacy (3.4.1-1) over (3.4.0-2) ... Setting up openssl-provider-legacy (3.4.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.4.1-1_amd64.deb ... Unpacking libssl3t64:amd64 (3.4.1-1) over (3.4.0-2) ... Setting up libssl3t64:amd64 (3.4.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6854 files and directories currently installed.) Preparing to unpack .../0-tzdata_2025a-2_all.deb ... Unpacking tzdata (2025a-2) over (2024b-6) ... Preparing to unpack .../1-media-types_11.0.0_all.deb ... Unpacking media-types (11.0.0) over (10.1.0) ... Preparing to unpack .../2-libffi8_3.4.7-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.7-1) over (3.4.6-1) ... Preparing to unpack .../3-libsepol2_3.8-1_amd64.deb ... Unpacking libsepol2:amd64 (3.8-1) over (3.7-1) ... Preparing to unpack .../4-python3-gsd_3.4.2-2_amd64.deb ... Unpacking python3-gsd (3.4.2-2) over (3.3.0-1+b3) ... Preparing to unpack .../5-python3-numpy_1%3a2.2.2+ds-2_amd64.deb ... Unpacking python3-numpy (1:2.2.2+ds-2) over (1:1.26.4+ds-13) ... Selecting previously unselected package python3-numpy-dev:amd64. Preparing to unpack .../6-python3-numpy-dev_1%3a2.2.2+ds-2_amd64.deb ... Unpacking python3-numpy-dev:amd64 (1:2.2.2+ds-2) ... Setting up media-types (11.0.0) ... Installing new version of config file /etc/mime.types ... Setting up tzdata (2025a-2) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Feb 13 15:29:56 UTC 2025. Universal Time is now: Thu Feb 13 15:29:56 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up python3-numpy-dev:amd64 (1:2.2.2+ds-2) ... Setting up libsepol2:amd64 (3.8-1) ... Setting up python3-numpy (1:2.2.2+ds-2) ... Setting up libgfortran5:amd64 (14.2.0-17) ... Setting up libffi8:amd64 (3.4.7-1) ... Setting up python3-gsd (3.4.2-2) ... Processing triggers for libc-bin (2.40-6) ... 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-yf', 'dist-upgrade'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m26.0s DUMP: cb0f8e1dc02eac712810ff414cd111da - 0m26.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m26.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'show', '--no-all-versions', 'python3-gsd'] 0m26.4s DUMP: Package: python3-gsd Source: python-gsd Version: 3.4.2-2 Installed-Size: 1848 Maintainer: Debichem Team Architecture: amd64 Depends: python3 (<< 3.14), python3 (>= 3.12~), python3-numpy (>= 1:1.19.0~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any, libc6 (>= 2.14) Suggests: python-gsd-doc Breaks: python3-mdanalysis (<< 2.5.0+dfsg1-2~) Description-en: native file format for HOOMD-blue (Python 3 module) The GSD file format is the native file format for HOOMD-blue. GSD files store trajectories of the HOOMD-blue system state in a binary file with efficient random access to frames. GSD allows all particle and topology properties to vary from one frame to the next. Use the GSD Python API to specify the initial condition for a HOOMD-blue simulation or analyze trajectory output with a script. Read a GSD trajectory with a visualization tool to explore the behavior of the simulation. . This package installs the library to access GSD files from Python 3. Description-md5: 2bd98f72a37f05d1d4a5ec147a0c5767 Homepage: https://gsd.readthedocs.io/ Section: python Priority: optional Filename: pool/main/p/python-gsd/python3-gsd_3.4.2-2_amd64.deb Size: 237904 MD5sum: 245320825c8a301b48ec04931e085584 SHA256: e53532d91662c2d98655fc2f55b68abcb7bcaaf3f3425879ae6fe5c3f7a74a83 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'show', '--no-all-versions', 'python3-gsd'] 0m26.4s INFO: apt-cache knows about the following packages: python3-gsd 0m26.4s INFO: Running scripts pre_install 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_database-server'] 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_database-server'] 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_exceptions'] 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_exceptions'] 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_extras'] 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_extras'] 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture'] 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture'] 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy'] 0m26.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m26.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy'] 0m26.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy', 'python3-gsd'] 0m26.6s DUMP: python3-gsd: Installed: 3.4.2-2 Candidate: 3.4.2-2 Version table: *** 3.4.2-2 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m26.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy', 'python3-gsd'] 0m26.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-y', 'install', 'python3-gsd'] 0m27.1s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-gsd is already the newest version (3.4.2-2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-y', 'install', 'python3-gsd'] 0m27.1s INFO: Running scripts post_install 0m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_install_exceptions'] 0m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_install_exceptions'] 0m27.1s INFO: Running scripts post_distupgrade 0m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_exceptions'] 0m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_exceptions'] 0m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_zz_backports'] 0m27.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_distupgrade_zz_backports'] 0m27.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m27.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m27.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m28.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m28.1s INFO: Running scripts pre_install 0m28.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_database-server'] 0m28.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_database-server'] 0m28.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_exceptions'] 0m28.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_exceptions'] 0m28.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_extras'] 0m28.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_extras'] 0m28.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture'] 0m28.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture'] 0m28.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m28.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m28.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy'] 0m28.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy'] 0m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy', 'python3-gsd'] 0m28.3s DUMP: python3-gsd: Installed: 3.4.2-2 Candidate: 3.4.2-2 Version table: *** 3.4.2-2 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-cache', 'policy', 'python3-gsd'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-y', 'install', 'python3-gsd=3.4.2-2'] 0m28.9s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-gsd is already the newest version (3.4.2-2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m28.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', '-y', 'install', 'python3-gsd=3.4.2-2'] 0m28.9s INFO: Running scripts post_install 0m28.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_install_exceptions'] 0m28.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_install_exceptions'] 0m28.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m29.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m29.7s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', '-ac', '--ignore-obsolete'] 0m30.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', '-ac', '--ignore-obsolete'] 0m30.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m30.9s DUMP: 0.15.6 0m30.9s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m30.9s INFO: Running adequate version 0.15.6 now. 0m30.9s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'python3-gsd'] 0m31.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'python3-gsd'] 0m31.0s INFO: Running scripts pre_remove 0m31.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m31.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m31.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m31.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m31.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_exceptions'] 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/pre_remove_exceptions'] 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m31.8s DUMP: install ok installed apt apt 2.9.28 install ok installed base-files base-files 13.6 install ok installed base-passwd base-passwd 3.6.6 install ok installed bash bash 5.2.37-1 install ok installed bsdutils bsdutils 1:2.40.4-3 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.89 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.21 install ok installed diffutils diffutils 1:3.10-2 install ok installed dpkg dpkg 1.22.15 install ok installed e2fsprogs e2fsprogs 1.47.2-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-17 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.13-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.68 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.28 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.2-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2+b1 install ok installed libblas3:amd64 libblas3 3.12.1-2 install ok installed libblkid1:amd64 libblkid1 2.40.4-3 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-6 install ok installed libc6:amd64 libc6 2.40-6 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.2-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.38-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.277 install ok installed libexpat1:amd64 libexpat1 2.6.4-1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2-1 install ok installed libffi8:amd64 libffi8 3.4.7-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-17 install ok installed libgfortran5:amd64 libgfortran5 14.2.0-17 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed liblapack3:amd64 liblapack3 3.12.1-2 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-3 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.4-3 install ok installed libncursesw6:amd64 libncursesw6 6.5+20250125-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-3 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-3 install ok installed libpam-runtime libpam-runtime 1.7.0-3 install ok installed libpam0g:amd64 libpam0g 1.7.0-3 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.45-1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.13.1-2 install ok installed libpython3.13-minimal:amd64 libpython3.13-minimal 3.13.2-1 install ok installed libpython3.13-stdlib:amd64 libpython3.13-stdlib 3.13.2-1 install ok installed libreadline8t64:amd64 libreadline8t64 8.2-6 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2 install ok installed libselinux1:amd64 libselinux1 3.8-3 install ok installed libsemanage-common libsemanage-common 3.7-2.1 install ok installed libsemanage2:amd64 libsemanage2 3.7-2.1+b1 install ok installed libsepol2:amd64 libsepol2 3.8-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.4-3 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-1 install ok installed libss2:amd64 libss2 1.47.2-1 install ok installed libssl3t64:amd64 libssl3t64 3.4.1-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-17 install ok installed libsystemd0:amd64 libsystemd0 257.2-3 install ok installed libtinfo6:amd64 libtinfo6 6.5+20250125-2 install ok installed libudev1:amd64 libudev1 257.2-3 install ok installed libuuid1:amd64 libuuid1 2.40.4-3 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-2 install ok installed login login 1:4.16.0-2+really2.40.4-3 install ok installed login.defs login.defs 1:4.16.0-7 install ok installed logsave logsave 1.47.2-1 install ok installed mawk mawk 1.3.4.20250131-1 install ok installed media-types media-types 11.0.0 install ok installed mount mount 2.40.4-3 install ok installed ncurses-base ncurses-base 6.5+20250125-2 install ok installed ncurses-bin ncurses-bin 6.5+20250125-2 install ok installed netbase netbase 6.4 install ok installed openssl-provider-legacy openssl-provider-legacy 3.4.1-1 install ok installed passwd passwd 1:4.16.0-7 install ok installed perl-base perl-base 5.40.0-8 install ok installed python3 python3 3.13.1-2 install ok installed python3-gsd python3-gsd 3.4.2-2 install ok installed python3-minimal python3-minimal 3.13.1-2 install ok installed python3-numpy python3-numpy 1:2.2.2+ds-2 install ok installed python3-numpy-dev:amd64 python3-numpy-dev 1:2.2.2+ds-2 install ok installed python3.13 python3.13 3.13.2-1 install ok installed python3.13-minimal python3.13-minimal 3.13.2-1 install ok installed readline-common readline-common 8.2-6 install ok installed sed sed 4.9-2 install ok installed sqv sqv 1.2.1-6+b1 install ok installed sysvinit-utils sysvinit-utils 3.14-1 install ok installed tar tar 1.35+dfsg-3.1 install ok installed tzdata tzdata 2025a-2 install ok installed usr-is-merged usr-is-merged 39+nmu2 install ok installed util-linux util-linux 2.40.4-3 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', 'remove', 'libblas3:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'liblapack3:amd64', 'libncursesw6:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'media-types', 'netbase', 'python3', 'python3-minimal', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3.13', 'python3.13-minimal', 'readline-common', 'python3-gsd'] 0m33.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libblas3 libexpat1 libffi8 libgfortran5 liblapack3 libncursesw6 libpython3-stdlib libpython3.13-minimal libpython3.13-stdlib libreadline8t64 libsqlite3-0 media-types netbase python3 python3-gsd python3-minimal python3-numpy python3-numpy-dev python3.13 python3.13-minimal readline-common 0 upgraded, 0 newly installed, 21 to remove and 0 not upgraded. After this operation, 85.4 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6912 files and directories currently installed.) Removing python3-gsd (3.4.2-2) ... Removing python3-numpy (1:2.2.2+ds-2) ... Removing liblapack3:amd64 (3.12.1-2) ... Removing libblas3:amd64 (3.12.1-2) ... Removing python3 (3.13.1-2) ... Removing python3.13 (3.13.2-1) ... Removing python3-minimal (3.13.1-2) ... Removing python3.13-minimal (3.13.2-1) ... Removing libexpat1:amd64 (2.6.4-1) ... Removing libpython3-stdlib:amd64 (3.13.1-2) ... Removing libpython3.13-stdlib:amd64 (3.13.2-1) ... find: '/usr/lib/python3': No such file or directory Removing libffi8:amd64 (3.4.7-1) ... Removing libgfortran5:amd64 (14.2.0-17) ... Removing libncursesw6:amd64 (6.5+20250125-2) ... Removing libpython3.13-minimal:amd64 (3.13.2-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.2-6) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsqlite3-0:amd64 (3.46.1-1) ... Removing media-types (11.0.0) ... Removing netbase (6.4) ... Removing python3-numpy-dev:amd64 (1:2.2.2+ds-2) ... Removing readline-common (8.2-6) ... Processing triggers for libc-bin (2.40-6) ... 0m33.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', 'remove', 'libblas3:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'liblapack3:amd64', 'libncursesw6:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'media-types', 'netbase', 'python3', 'python3-minimal', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3.13', 'python3.13-minimal', 'readline-common', 'python3-gsd'] 0m33.6s INFO: Running scripts post_remove 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_remove_exceptions'] 0m33.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_remove_exceptions'] 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg', '--purge', 'libblas3:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'liblapack3:amd64', 'libncursesw6:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'media-types', 'netbase', 'python3', 'python3-minimal', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3.13', 'python3.13-minimal', 'readline-common'] 0m33.7s DUMP: dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libffi8 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed (Reading database ... 5035 files and directories currently installed.) Purging configuration files for libpython3.13-minimal:amd64 (3.13.2-1) ... dpkg: warning: ignoring request to remove libpython3.13-stdlib which isn't installed Purging configuration files for libreadline8t64:amd64 (8.2-6) ... dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed Purging configuration files for media-types (11.0.0) ... Purging configuration files for netbase (6.4) ... Purging configuration files for python3 (3.13.1-2) ... dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-numpy-dev which isn't installed dpkg: warning: ignoring request to remove python3.13 which isn't installed Purging configuration files for python3.13-minimal (3.13.2-1) ... Purging configuration files for readline-common (8.2-6) ... 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg', '--purge', 'libblas3:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'liblapack3:amd64', 'libncursesw6:amd64', 'libpython3-stdlib:amd64', 'libpython3.13-minimal:amd64', 'libpython3.13-stdlib:amd64', 'libreadline8t64:amd64', 'libsqlite3-0:amd64', 'media-types', 'netbase', 'python3', 'python3-minimal', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3.13', 'python3.13-minimal', 'readline-common'] 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg', '--purge', 'python3-gsd'] 0m33.7s DUMP: dpkg: warning: ignoring request to remove python3-gsd which isn't installed 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg', '--purge', 'python3-gsd'] 0m33.7s INFO: Running scripts post_purge 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_purge_exceptions'] 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_purge_exceptions'] 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg', '--purge', '--pending'] 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg', '--purge', '--pending'] 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg', '--remove', '--pending'] 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg', '--remove', '--pending'] 0m33.7s INFO: Running scripts post_test 0m33.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_test_exceptions'] 0m33.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'tmp/scripts/post_test_exceptions'] 0m33.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m34.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m34.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg-divert', '--list'] 0m34.2s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m34.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'dpkg-divert', '--list'] 0m34.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', 'clean'] 0m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca', 'apt-get', 'clean'] 0m34.3s DEBUG: Recording chroot state 0m35.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/shm'] 0m35.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/shm'] 0m35.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/console'] 0m35.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/console'] 0m35.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/ptmx'] 0m35.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/ptmx'] 0m35.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/pts'] 0m35.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/dev/pts'] 0m35.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/proc'] 0m35.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca/proc'] 0m35.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m35.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpk7m7_xca'] 0m35.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpk7m7_xca 0m35.6s INFO: PASS: Upgrading between Debian distributions. 0m35.6s INFO: PASS: All tests. 0m35.6s INFO: piuparts run ends. ret=0 End: 2025-02-13 15:30:08 GMT