Start: 2026-11-02 15:33:14 GMT [testing] Package: python3-piqtree Source: python-piqtree Version: 0.8.3-1 Installed-Size: 380 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: python3 (<< 3.15), python3 (>= 3.14~), python3-citeable, python3-cogent3, python3-requests, python3-yaml, python3:any, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libiqtree3 (>= 3.1.4+dfsg), libstdc++6 (>= 14) Suggests: python-piqtree-doc Description: Python interface for phylogenetic tree inference with IQ-TREE Multi-Arch: same Homepage: https://github.com/iqtree/piqtree Description-md5: afed89014e59228ba229cc33832a4cc7 Section: python Priority: optional Filename: pool/main/p/python-piqtree/python3-piqtree_0.8.3-1_amd64.deb Size: 114036 MD5sum: efe362ef9d689861032776cca306d050 SHA256: 77b74136dda13aec482ebd0e5429922748c9208d1dadf089cd0a056759e155f8 [sid] Package: python3-piqtree Source: python-piqtree (0.8.3-1) Version: 0.8.3-1+b1 Installed-Size: 612 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: python3 (<< 3.16), python3 (>= 3.14~), python3-citeable, python3-cogent3, python3-requests, python3-yaml, python3:any, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libiqtree3 (>= 3.1.4+dfsg), libstdc++6 (>= 14) Suggests: python-piqtree-doc Description: Python interface for phylogenetic tree inference with IQ-TREE Multi-Arch: same Homepage: https://github.com/iqtree/piqtree Description-md5: afed89014e59228ba229cc33832a4cc7 Section: python Priority: optional Filename: pool/main/p/python-piqtree/python3-piqtree_0.8.3-1+b1_amd64.deb Size: 116552 MD5sum: c07dba0994ff4b0c1bcf22ec25deb782 SHA256: e1474f71681ef20f52cdfbc0e38b1af2dc8731ac583eba05da50a6d2c02e2605 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-piqtree=0.8.3-1+b1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.6.1~202608291514~1.6.0-23-g1172a6e5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/bin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-piqtree=0.8.3-1+b1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 6.12.113+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.113-1 (2026-10-15) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp_zeipvww 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp_zeipvww 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/forky-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/pts'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/pts'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/ptmx'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/console'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/console'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/shm'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/shm'] 0m0.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ forky main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp_zeipvww/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', 'update'] 0m2.9s DUMP: Get:1 http://deb.debian.org/debian forky InRelease [151 kB] Get:2 http://deb.debian.org/debian forky/main amd64 Packages [10.1 MB] Get:3 http://deb.debian.org/debian forky/main Translation-en [6688 kB] Fetched 16.9 MB in 2s (10.7 MB/s) Reading package lists... 0m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', 'update'] 0m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-yf', 'dist-upgrade'] 0m3.5s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-yf', 'dist-upgrade'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.9s DUMP: 8e51879c0bce4a032405f21d4d54f2db - 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.9s INFO: Running scripts post_setup 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_dummy_users'] 0m4.7s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_dummy_users'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_forbid_home'] 0m4.7s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_forbid_home'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.7s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_minimize'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_minimize'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_zz_backports'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_setup_zz_backports'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.8s DUMP: install ok installed apt apt 3.3.3 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed coreutils coreutils 9.10-1 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.11 install ok installed findutils findutils 4.11.0-3 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-3 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.3 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.1.2-1 install ok installed libaudit1:amd64 libaudit1 1:4.1.2-1+b2 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-7 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-7 install ok installed libc6:amd64 libc6 2.43-7 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-11+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-3 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.48-3.1 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b2 install ok installed libselinux1:amd64 libselinux1 3.11-2.1+b1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b2 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libssl3t64:amd64 libssl3t64 3.6.5-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 262-1 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 262-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.3-1 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed mount mount 2.42.4-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.5-1 install ok installed passwd passwd 1:4.20.3-1 install ok installed perl-base perl-base 5.42.3-1 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-6 install ok installed tzdata tzdata 2026f-1 install ok installed util-linux util-linux 2.42.4-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-3 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.8s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m4.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m5.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m5.2s INFO: Running scripts is_testable 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/is_testable_uninstallable'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/is_testable_uninstallable'] 0m5.2s INFO: Running scripts pre_test 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_test_exceptions'] 0m5.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_test_exceptions'] 0m5.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_test_root_password'] 0m5.3s DUMP: New password: Retype new password: passwd: password updated successfully 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_test_root_password'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'show', '--no-all-versions', 'python3-piqtree'] 0m5.5s DUMP: Package: python3-piqtree Source: python-piqtree Version: 0.8.3-1 Installed-Size: 380 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: python3 (<< 3.15), python3 (>= 3.14~), python3-citeable, python3-cogent3, python3-requests, python3-yaml, python3:any, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libiqtree3 (>= 3.1.4+dfsg), libstdc++6 (>= 14) Suggests: python-piqtree-doc Description-en: Python interface for phylogenetic tree inference with IQ-TREE piqtree provides a Python interface to IQ-TREE for phylogenetic analysis. It allows phylogenetic trees to be inferred from sequence alignments using the IQ-TREE maximum-likelihood framework. Description-md5: afed89014e59228ba229cc33832a4cc7 Multi-Arch: same Homepage: https://github.com/iqtree/piqtree Section: python Priority: optional Filename: pool/main/p/python-piqtree/python3-piqtree_0.8.3-1_amd64.deb Size: 114036 MD5sum: efe362ef9d689861032776cca306d050 SHA256: 77b74136dda13aec482ebd0e5429922748c9208d1dadf089cd0a056759e155f8 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'show', '--no-all-versions', 'python3-piqtree'] 0m5.5s INFO: apt-cache knows about the following packages: python3-piqtree 0m5.5s INFO: Running scripts pre_install 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_database-server'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_database-server'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_exceptions'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_exceptions'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_extras'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_extras'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy'] 0m5.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian forky/main amd64 Packages release o=Debian,a=testing,n=forky,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy', 'python3-piqtree'] 0m5.6s DUMP: python3-piqtree: Installed: (none) Candidate: 0.8.3-1 Version table: 0.8.3-1 500 500 http://deb.debian.org/debian forky/main amd64 Packages 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy', 'python3-piqtree'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-y', 'install', 'python3-piqtree'] 0m31.8s DUMP: Reading package lists... Building dependency tree... Solving dependencies... The following additional packages will be installed: ca-certificates libblas3 libexpat1 libffi8 libgfortran5 libgomp1 libhwloc15 libiqtree3 liblapack3 liblsd2-0 libncursesw6 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libqhull-r8.0 libreadline8t64 libsqlite3-0 libtbb12 libtbbbind-2-5 libtbbmalloc2 libyaml-0-2 libyaml-cpp0.9 media-types netbase openssl python3 python3-certifi python3-chardet python3-charset-normalizer python3-citeable python3-cogent3 python3-decorator python3-idna python3-llvmlite python3-minimal python3-numba python3-numpy python3-numpy-dev python3-requests python3-scinexus python3-scipy python3-scitrack python3-stevedore python3-tqdm python3-typeguard python3-typing-extensions python3-urllib3 python3-yaml python3.14 python3.14-minimal readline-common Suggested packages: libhwloc-contrib-plugins python3-doc python3-tk python3-venv python-charset-normalizer-doc python-cogent-doc llvmlite-doc nvidia-cuda-toolkit gcc gfortran python-numpy-doc python3-dev python3-pytest python-piqtree-doc python3-cryptography python3-openssl python3-socks python-requests-doc python-scinexus-doc python-scipy-doc python-typing-extensions-doc python3-brotli python3.14-venv python3.14-doc binutils binfmt-support readline-doc Recommended packages: libhwloc-plugins libgpm2 dialign ncbi-blast+-legacy numba-doc python3-pip g++ | c++-compiler python3-pil python3-pooch The following NEW packages will be installed: ca-certificates libblas3 libexpat1 libffi8 libgfortran5 libgomp1 libhwloc15 libiqtree3 liblapack3 liblsd2-0 libncursesw6 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libqhull-r8.0 libreadline8t64 libsqlite3-0 libtbb12 libtbbbind-2-5 libtbbmalloc2 libyaml-0-2 libyaml-cpp0.9 media-types netbase openssl python3 python3-certifi python3-chardet python3-charset-normalizer python3-citeable python3-cogent3 python3-decorator python3-idna python3-llvmlite python3-minimal python3-numba python3-numpy python3-numpy-dev python3-piqtree python3-requests python3-scinexus python3-scipy python3-scitrack python3-stevedore python3-tqdm python3-typeguard python3-typing-extensions python3-urllib3 python3-yaml python3.14 python3.14-minimal readline-common 0 upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 69.4 MB of archives. After this operation, 348 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian forky/main amd64 libexpat1 amd64 2.9.0-1 [133 kB] Get:2 http://deb.debian.org/debian forky/main amd64 libpython3.14-minimal amd64 3.14.10-1 [905 kB] Get:3 http://deb.debian.org/debian forky/main amd64 python3.14-minimal amd64 3.14.10-1 [2734 kB] Get:4 http://deb.debian.org/debian forky/main amd64 python3-minimal amd64 3.14.7-3 [25.3 kB] Get:5 http://deb.debian.org/debian forky/main amd64 media-types all 14.0.0 [30.8 kB] Get:6 http://deb.debian.org/debian forky/main amd64 netbase all 6.6 [10.3 kB] Get:7 http://deb.debian.org/debian forky/main amd64 libffi8 amd64 3.8.0-2 [32.5 kB] Get:8 http://deb.debian.org/debian forky/main amd64 libncursesw6 amd64 6.6+20260608-2 [137 kB] Get:9 http://deb.debian.org/debian forky/main amd64 readline-common all 8.3-4 [74.8 kB] Get:10 http://deb.debian.org/debian forky/main amd64 libreadline8t64 amd64 8.3-4 [181 kB] Get:11 http://deb.debian.org/debian forky/main amd64 libsqlite3-0 amd64 3.53.4-2 [974 kB] Get:12 http://deb.debian.org/debian forky/main amd64 libpython3.14-stdlib amd64 3.14.10-1 [2360 kB] Get:13 http://deb.debian.org/debian forky/main amd64 python3.14 amd64 3.14.10-1 [884 kB] Get:14 http://deb.debian.org/debian forky/main amd64 libpython3-stdlib amd64 3.14.7-3 [8252 B] Get:15 http://deb.debian.org/debian forky/main amd64 python3 amd64 3.14.7-3 [26.0 kB] Get:16 http://deb.debian.org/debian forky/main amd64 python3-numpy-dev amd64 1:2.4.6+ds-5+b1 [137 kB] Get:17 http://deb.debian.org/debian forky/main amd64 libblas3 amd64 3.12.1-8 [206 kB] Get:18 http://deb.debian.org/debian forky/main amd64 libgfortran5 amd64 16.2.0-3 [879 kB] Get:19 http://deb.debian.org/debian forky/main amd64 liblapack3 amd64 3.12.1-8 [2548 kB] Get:20 http://deb.debian.org/debian forky/main amd64 python3-numpy amd64 1:2.4.6+ds-5+b1 [7252 kB] Get:21 http://deb.debian.org/debian forky/main amd64 openssl amd64 3.6.5-1 [1554 kB] Get:22 http://deb.debian.org/debian forky/main amd64 ca-certificates all 20260816+nmu1 [134 kB] Get:23 http://deb.debian.org/debian forky/main amd64 libgomp1 amd64 16.2.0-3 [151 kB] Get:24 http://deb.debian.org/debian forky/main amd64 libhwloc15 amd64 2.15.0-2 [178 kB] Get:25 http://deb.debian.org/debian forky/main amd64 liblsd2-0 amd64 1.9.9+dfsg-2 [194 kB] Get:26 http://deb.debian.org/debian forky/main amd64 libyaml-cpp0.9 amd64 0.9.0+dfsg-10 [156 kB] Get:27 http://deb.debian.org/debian forky/main amd64 libiqtree3 amd64 3.1.4+dfsg-2 [3259 kB] Get:28 http://deb.debian.org/debian forky/main amd64 libqhull-r8.0 amd64 2020.2-9 [248 kB] Get:29 http://deb.debian.org/debian forky/main amd64 libtbbbind-2-5 amd64 2023.1.0-3 [13.2 kB] Get:30 http://deb.debian.org/debian forky/main amd64 libtbbmalloc2 amd64 2023.1.0-3 [51.0 kB] Get:31 http://deb.debian.org/debian forky/main amd64 libtbb12 amd64 2023.1.0-3 [101 kB] Get:32 http://deb.debian.org/debian forky/main amd64 libyaml-0-2 amd64 0.2.5-2+b1 [53.8 kB] Get:33 http://deb.debian.org/debian forky/main amd64 python3-certifi all 2026.10.23+ds-1 [9956 B] Get:34 http://deb.debian.org/debian forky/main amd64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Get:35 http://deb.debian.org/debian forky/main amd64 python3-charset-normalizer amd64 3.4.7-2+b3 [224 kB] Get:36 http://deb.debian.org/debian forky/main amd64 python3-citeable all 2026.10.15-1 [17.5 kB] Get:37 http://deb.debian.org/debian forky/main amd64 python3-llvmlite amd64 0.47.0-0.1 [22.9 MB] Get:38 http://deb.debian.org/debian forky/main amd64 python3-decorator all 5.3.1-1 [33.3 kB] Get:39 http://deb.debian.org/debian forky/main amd64 python3-scipy amd64 1.17.1-5+b2 [17.4 MB] Get:40 http://deb.debian.org/debian forky/main amd64 python3-numba amd64 0.65.1+dfsg-3+b1 [1788 kB] Get:41 http://deb.debian.org/debian forky/main amd64 python3-scitrack all 2026.6.24-3 [14.4 kB] Get:42 http://deb.debian.org/debian forky/main amd64 python3-tqdm all 4.70.1-1 [91.3 kB] Get:43 http://deb.debian.org/debian forky/main amd64 python3-typing-extensions all 4.16.0-5 [95.2 kB] Get:44 http://deb.debian.org/debian forky/main amd64 python3-typeguard all 4.6.0-1 [39.9 kB] Get:45 http://deb.debian.org/debian forky/main amd64 python3-scinexus all 2026.7.2-1 [47.9 kB] Get:46 http://deb.debian.org/debian forky/main amd64 python3-stevedore all 5.9.1-4 [23.2 kB] Get:47 http://deb.debian.org/debian forky/main amd64 python3-cogent3 amd64 2026.6.2a0+dfsg-3 [523 kB] Get:48 http://deb.debian.org/debian forky/main amd64 python3-idna all 3.20-1 [45.8 kB] Get:49 http://deb.debian.org/debian forky/main amd64 python3-urllib3 all 2.8.0-2 [125 kB] Get:50 http://deb.debian.org/debian forky/main amd64 python3-requests all 2.34.2-1 [77.6 kB] Get:51 http://deb.debian.org/debian forky/main amd64 python3-yaml amd64 6.0.3-1+b2 [161 kB] Get:52 http://deb.debian.org/debian forky/main amd64 python3-piqtree amd64 0.8.3-1 [114 kB] Preconfiguring packages ... Fetched 69.4 MB in 2s (34.0 MB/s) Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4952 files and directories currently installed.) Preparing to unpack .../libexpat1_2.9.0-1_amd64.deb ... Unpacking libexpat1:amd64 (2.9.0-1) ... Selecting previously unselected package libpython3.14-minimal:amd64. Preparing to unpack .../libpython3.14-minimal_3.14.10-1_amd64.deb ... Unpacking libpython3.14-minimal:amd64 (3.14.10-1) ... Selecting previously unselected package python3.14-minimal. Preparing to unpack .../python3.14-minimal_3.14.10-1_amd64.deb ... Unpacking python3.14-minimal (3.14.10-1) ... Setting up libpython3.14-minimal:amd64 (3.14.10-1) ... Setting up libexpat1:amd64 (2.9.0-1) ... Setting up python3.14-minimal (3.14.10-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5308 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.14.7-3_amd64.deb ... Unpacking python3-minimal (3.14.7-3) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_14.0.0_all.deb ... Unpacking media-types (14.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.6_all.deb ... Unpacking netbase (6.6) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../03-libffi8_3.8.0-2_amd64.deb ... Unpacking libffi8:amd64 (3.8.0-2) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../04-libncursesw6_6.6+20260608-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.6+20260608-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../05-readline-common_8.3-4_all.deb ... Unpacking readline-common (8.3-4) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../06-libreadline8t64_8.3-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.3-4) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../07-libsqlite3-0_3.53.4-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.53.4-2) ... Selecting previously unselected package libpython3.14-stdlib:amd64. Preparing to unpack .../08-libpython3.14-stdlib_3.14.10-1_amd64.deb ... Unpacking libpython3.14-stdlib:amd64 (3.14.10-1) ... Selecting previously unselected package python3.14. Preparing to unpack .../09-python3.14_3.14.10-1_amd64.deb ... Unpacking python3.14 (3.14.10-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../10-libpython3-stdlib_3.14.7-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.14.7-3) ... Setting up python3-minimal (3.14.7-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5838 files and directories currently installed.) Preparing to unpack .../00-python3_3.14.7-3_amd64.deb ... Unpacking python3 (3.14.7-3) ... Selecting previously unselected package python3-numpy-dev:amd64. Preparing to unpack .../01-python3-numpy-dev_1%3a2.4.6+ds-5+b1_amd64.deb ... Unpacking python3-numpy-dev:amd64 (1:2.4.6+ds-5+b1) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../02-libblas3_3.12.1-8_amd64.deb ... Unpacking libblas3:amd64 (3.12.1-8) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../03-libgfortran5_16.2.0-3_amd64.deb ... Unpacking libgfortran5:amd64 (16.2.0-3) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../04-liblapack3_3.12.1-8_amd64.deb ... Unpacking liblapack3:amd64 (3.12.1-8) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../05-python3-numpy_1%3a2.4.6+ds-5+b1_amd64.deb ... Unpacking python3-numpy (1:2.4.6+ds-5+b1) ... Selecting previously unselected package openssl. Preparing to unpack .../06-openssl_3.6.5-1_amd64.deb ... Unpacking openssl (3.6.5-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../07-ca-certificates_20260816+nmu1_all.deb ... Unpacking ca-certificates (20260816+nmu1) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../08-libgomp1_16.2.0-3_amd64.deb ... Unpacking libgomp1:amd64 (16.2.0-3) ... Selecting previously unselected package libhwloc15:amd64. Preparing to unpack .../09-libhwloc15_2.15.0-2_amd64.deb ... Unpacking libhwloc15:amd64 (2.15.0-2) ... Selecting previously unselected package liblsd2-0. Preparing to unpack .../10-liblsd2-0_1.9.9+dfsg-2_amd64.deb ... Unpacking liblsd2-0 (1.9.9+dfsg-2) ... Selecting previously unselected package libyaml-cpp0.9:amd64. Preparing to unpack .../11-libyaml-cpp0.9_0.9.0+dfsg-10_amd64.deb ... Unpacking libyaml-cpp0.9:amd64 (0.9.0+dfsg-10) ... Selecting previously unselected package libiqtree3:amd64. Preparing to unpack .../12-libiqtree3_3.1.4+dfsg-2_amd64.deb ... Unpacking libiqtree3:amd64 (3.1.4+dfsg-2) ... Selecting previously unselected package libqhull-r8.0:amd64. Preparing to unpack .../13-libqhull-r8.0_2020.2-9_amd64.deb ... Unpacking libqhull-r8.0:amd64 (2020.2-9) ... Selecting previously unselected package libtbbbind-2-5:amd64. Preparing to unpack .../14-libtbbbind-2-5_2023.1.0-3_amd64.deb ... Unpacking libtbbbind-2-5:amd64 (2023.1.0-3) ... Selecting previously unselected package libtbbmalloc2:amd64. Preparing to unpack .../15-libtbbmalloc2_2023.1.0-3_amd64.deb ... Unpacking libtbbmalloc2:amd64 (2023.1.0-3) ... Selecting previously unselected package libtbb12:amd64. Preparing to unpack .../16-libtbb12_2023.1.0-3_amd64.deb ... Unpacking libtbb12:amd64 (2023.1.0-3) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../17-libyaml-0-2_0.2.5-2+b1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.5-2+b1) ... Selecting previously unselected package python3-certifi. Preparing to unpack .../18-python3-certifi_2026.10.23+ds-1_all.deb ... Unpacking python3-certifi (2026.10.23+ds-1) ... Selecting previously unselected package python3-chardet. Preparing to unpack .../19-python3-chardet_5.2.0+dfsg-2_all.deb ... Unpacking python3-chardet (5.2.0+dfsg-2) ... Selecting previously unselected package python3-charset-normalizer. Preparing to unpack .../20-python3-charset-normalizer_3.4.7-2+b3_amd64.deb ... Unpacking python3-charset-normalizer (3.4.7-2+b3) ... Selecting previously unselected package python3-citeable. Preparing to unpack .../21-python3-citeable_2026.10.15-1_all.deb ... Unpacking python3-citeable (2026.10.15-1) ... Selecting previously unselected package python3-llvmlite. Preparing to unpack .../22-python3-llvmlite_0.47.0-0.1_amd64.deb ... Unpacking python3-llvmlite (0.47.0-0.1) ... Selecting previously unselected package python3-decorator. Preparing to unpack .../23-python3-decorator_5.3.1-1_all.deb ... Unpacking python3-decorator (5.3.1-1) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../24-python3-scipy_1.17.1-5+b2_amd64.deb ... Unpacking python3-scipy (1.17.1-5+b2) ... Selecting previously unselected package python3-numba. Preparing to unpack .../25-python3-numba_0.65.1+dfsg-3+b1_amd64.deb ... Unpacking python3-numba (0.65.1+dfsg-3+b1) ... Selecting previously unselected package python3-scitrack. Preparing to unpack .../26-python3-scitrack_2026.6.24-3_all.deb ... Unpacking python3-scitrack (2026.6.24-3) ... Selecting previously unselected package python3-tqdm. Preparing to unpack .../27-python3-tqdm_4.70.1-1_all.deb ... Unpacking python3-tqdm (4.70.1-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../28-python3-typing-extensions_4.16.0-5_all.deb ... Unpacking python3-typing-extensions (4.16.0-5) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../29-python3-typeguard_4.6.0-1_all.deb ... Unpacking python3-typeguard (4.6.0-1) ... Selecting previously unselected package python3-scinexus. Preparing to unpack .../30-python3-scinexus_2026.7.2-1_all.deb ... Unpacking python3-scinexus (2026.7.2-1) ... Selecting previously unselected package python3-stevedore. Preparing to unpack .../31-python3-stevedore_5.9.1-4_all.deb ... Unpacking python3-stevedore (5.9.1-4) ... Selecting previously unselected package python3-cogent3. Preparing to unpack .../32-python3-cogent3_2026.6.2a0+dfsg-3_amd64.deb ... Unpacking python3-cogent3 (2026.6.2a0+dfsg-3) ... Selecting previously unselected package python3-idna. Preparing to unpack .../33-python3-idna_3.20-1_all.deb ... Unpacking python3-idna (3.20-1) ... Selecting previously unselected package python3-urllib3. Preparing to unpack .../34-python3-urllib3_2.8.0-2_all.deb ... Unpacking python3-urllib3 (2.8.0-2) ... Selecting previously unselected package python3-requests. Preparing to unpack .../35-python3-requests_2.34.2-1_all.deb ... Unpacking python3-requests (2.34.2-1) ... Selecting previously unselected package python3-yaml. Preparing to unpack .../36-python3-yaml_6.0.3-1+b2_amd64.deb ... Unpacking python3-yaml (6.0.3-1+b2) ... Selecting previously unselected package python3-piqtree:amd64. Preparing to unpack .../37-python3-piqtree_0.8.3-1_amd64.deb ... Unpacking python3-piqtree:amd64 (0.8.3-1) ... Setting up media-types (14.0.0) ... Setting up libtbbmalloc2:amd64 (2023.1.0-3) ... Setting up libyaml-cpp0.9:amd64 (0.9.0+dfsg-10) ... Setting up liblsd2-0 (1.9.9+dfsg-2) ... Setting up libyaml-0-2:amd64 (0.2.5-2+b1) ... Setting up libsqlite3-0:amd64 (3.53.4-2) ... Setting up libqhull-r8.0:amd64 (2020.2-9) ... Setting up libgomp1:amd64 (16.2.0-3) ... Setting up libblas3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libhwloc15:amd64 (2.15.0-2) ... Setting up python3-numpy-dev:amd64 (1:2.4.6+ds-5+b1) ... Setting up libncursesw6:amd64 (6.6+20260608-2) ... Setting up libgfortran5:amd64 (16.2.0-3) ... Setting up libffi8:amd64 (3.8.0-2) ... Setting up netbase (6.6) ... Setting up openssl (3.6.5-1) ... Setting up readline-common (8.3-4) ... Setting up liblapack3:amd64 (3.12.1-8) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libiqtree3:amd64 (3.1.4+dfsg-2) ... Setting up libtbbbind-2-5:amd64 (2023.1.0-3) ... Setting up ca-certificates (20260816+nmu1) ... Updating certificates in /etc/ssl/certs... 120 added, 0 removed; done. Setting up libreadline8t64:amd64 (8.3-4) ... Setting up libpython3.14-stdlib:amd64 (3.14.10-1) ... Setting up libtbb12:amd64 (2023.1.0-3) ... Setting up python3.14 (3.14.10-1) ... Setting up libpython3-stdlib:amd64 (3.14.7-3) ... Setting up python3 (3.14.7-3) ... Setting up python3-llvmlite (0.47.0-0.1) ... Setting up python3-decorator (5.3.1-1) ... Setting up python3-chardet (5.2.0+dfsg-2) ... Setting up python3-certifi (2026.10.23+ds-1) ... Setting up python3-idna (3.20-1) ... Setting up python3-typing-extensions (4.16.0-5) ... Setting up python3-numpy (1:2.4.6+ds-5+b1) ... Setting up python3-urllib3 (2.8.0-2) ... Setting up python3-scitrack (2026.6.24-3) ... Setting up python3-stevedore (5.9.1-4) ... Setting up python3-scipy (1.17.1-5+b2) ... Setting up python3-citeable (2026.10.15-1) ... Setting up python3-charset-normalizer (3.4.7-2+b3) ... Setting up python3-tqdm (4.70.1-1) ... Setting up python3-typeguard (4.6.0-1) ... Setting up python3-yaml (6.0.3-1+b2) ... Setting up python3-numba (0.65.1+dfsg-3+b1) ... update-alternatives: using /usr/share/python3-numba/numba to provide /usr/bin/numba (numba) in auto mode Setting up python3-requests (2.34.2-1) ... Setting up python3-scinexus (2026.7.2-1) ... Setting up python3-cogent3 (2026.6.2a0+dfsg-3) ... Setting up python3-piqtree:amd64 (0.8.3-1) ... Processing triggers for libc-bin (2.43-7) ... Processing triggers for ca-certificates (20260816+nmu1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-y', 'install', 'python3-piqtree'] 0m31.8s INFO: Running scripts post_install 0m31.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_install_exceptions'] 0m31.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_install_exceptions'] 0m31.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m32.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m32.8s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmp_zeipvww to sid 0m32.8s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m32.8s INFO: Running scripts pre_distupgrade 0m32.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m32.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m32.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_exceptions'] 0m32.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_exceptions'] 0m32.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m32.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m32.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m32.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m32.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m32.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m32.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', 'update'] 0m36.6s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [193 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [10.8 MB] Get:3 http://deb.debian.org/debian sid/main Translation-en [7774 kB] Fetched 18.8 MB in 3s (6767 kB/s) Reading package lists... 0m36.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', 'update'] 0m36.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-yf', 'dist-upgrade'] 0m51.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: libbrotli1 libcap2 libcom-err2 libcurl4t64 libedit2 libgssapi-krb5-2 libidn2-0 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap2 libllvm22 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libpfm4 libpsl5t64 libsasl2-2 libsasl2-modules-db libssh2-1t64 libunistring5 libxml2-16 libz3-4 llvm-22 llvm-22-linker-tools llvm-22-runtime The following packages will be upgraded: apt coreutils gcc-16-base libapt-pkg7.0 libaudit-common libaudit1 libdb5.3t64 libgcc-s1 libgfortran5 libgomp1 libpcre2-8-0 libpython3-stdlib libstdc++6 libsystemd0 libudev1 python3 python3-cogent3 python3-llvmlite python3-minimal python3-numba python3-piqtree python3-scinexus tar zlib1g 24 upgraded, 28 newly installed, 0 to remove and 0 not upgraded. Need to get 101 MB of archives. After this operation, 306 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 libcap2 amd64 1:2.78-1+b1 [28.8 kB] Get:2 http://deb.debian.org/debian sid/main amd64 coreutils amd64 9.12-0.3 [3339 kB] Get:3 http://deb.debian.org/debian sid/main amd64 tar amd64 1.35+dfsg-7 [825 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 16.2.0-4 [151 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 16.2.0-4 [877 kB] Get:6 http://deb.debian.org/debian sid/main amd64 gcc-16-base amd64 16.2.0-4 [39.3 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 16.2.0-4 [74.1 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 16.2.0-4 [822 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libsystemd0 amd64 262.1-1 [512 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libudev1 amd64 262.1-1 [149 kB] Get:11 http://deb.debian.org/debian sid/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.2-4 [92.4 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libapt-pkg7.0 amd64 3.3.5 [1292 kB] Get:13 http://deb.debian.org/debian sid/main amd64 apt amd64 3.3.5 [1580 kB] Get:14 http://deb.debian.org/debian sid/main amd64 python3-cogent3 amd64 2026.10.15-1 [509 kB] Get:15 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.14.8-1 [25.8 kB] Get:16 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.14.8-1 [26.3 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libedit2 amd64 3.1-20260512-1 [93.6 kB] Get:18 http://deb.debian.org/debian sid/main amd64 libxml2-16 amd64 2.15.4+dfsg-1+b1 [684 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libz3-4 amd64 4.13.3-1.1 [8644 kB] Get:20 http://deb.debian.org/debian sid/main amd64 libllvm22 amd64 1:22.1.8-3 [29.4 MB] Get:21 http://deb.debian.org/debian sid/main amd64 llvm-22-runtime amd64 1:22.1.8-3 [577 kB] Get:22 http://deb.debian.org/debian sid/main amd64 llvm-22-linker-tools amd64 1:22.1.8-3 [1211 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libnghttp3-9 amd64 1.17.0-1 [68.1 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libngtcp2-16 amd64 1.24.0-1 [145 kB] Get:25 http://deb.debian.org/debian sid/main amd64 libbrotli1 amd64 1.2.0-4.1 [325 kB] Get:26 http://deb.debian.org/debian sid/main amd64 libkrb5support0 amd64 1.22.1-3 [31.1 kB] Get:27 http://deb.debian.org/debian sid/main amd64 libcom-err2 amd64 1.47.4-1+b2 [19.5 kB] Get:28 http://deb.debian.org/debian sid/main amd64 libk5crypto3 amd64 1.22.1-3 [79.0 kB] Get:29 http://deb.debian.org/debian sid/main amd64 libkeyutils1 amd64 1.6.3-6+b2 [9348 B] Get:30 http://deb.debian.org/debian sid/main amd64 libkrb5-3 amd64 1.22.1-3 [335 kB] Get:31 http://deb.debian.org/debian sid/main amd64 libgssapi-krb5-2 amd64 1.22.1-3 [137 kB] Get:32 http://deb.debian.org/debian sid/main amd64 libunistring5 amd64 1.4.2-1 [480 kB] Get:33 http://deb.debian.org/debian sid/main amd64 libidn2-0 amd64 2.3.8-5 [109 kB] Get:34 http://deb.debian.org/debian sid/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-12 [737 kB] Get:35 http://deb.debian.org/debian sid/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-12 [18.4 kB] Get:36 http://deb.debian.org/debian sid/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-12 [59.4 kB] Get:37 http://deb.debian.org/debian sid/main amd64 libldap2 amd64 2.6.14+dfsg-2 [200 kB] Get:38 http://deb.debian.org/debian sid/main amd64 libnghttp2-14 amd64 1.70.0-1 [92.7 kB] Get:39 http://deb.debian.org/debian sid/main amd64 libngtcp2-crypto-ossl0 amd64 1.24.0-1 [26.5 kB] Get:40 http://deb.debian.org/debian sid/main amd64 libpsl5t64 amd64 0.23.3-1 [61.7 kB] Get:41 http://deb.debian.org/debian sid/main amd64 libssh2-1t64 amd64 1.11.1-6 [253 kB] Get:42 http://deb.debian.org/debian sid/main amd64 libcurl4t64 amd64 8.23.0-1 [469 kB] Get:43 http://deb.debian.org/debian sid/main amd64 libpfm4 amd64 4.13.0+git106-g3e4031b-1+b2 [371 kB] Get:44 http://deb.debian.org/debian sid/main amd64 llvm-22 amd64 1:22.1.8-3 [19.2 MB] Get:45 http://deb.debian.org/debian sid/main amd64 python3-llvmlite amd64 0.50.0-0.2 [24.1 MB] Get:46 http://deb.debian.org/debian sid/main amd64 python3-numba amd64 0.68.1+ds-1 [1842 kB] Get:47 http://deb.debian.org/debian sid/main amd64 python3-scinexus all 2026.10.2-1 [69.7 kB] Get:48 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.14.8-1 [8520 B] Get:49 http://deb.debian.org/debian sid/main amd64 libaudit-common all 1:4.2.1-1 [13.3 kB] Get:50 http://deb.debian.org/debian sid/main amd64 libaudit1 amd64 1:4.2.1-1+b1 [59.9 kB] Get:51 http://deb.debian.org/debian sid/main amd64 libpcre2-8-0 amd64 10.49-1 [313 kB] Get:52 http://deb.debian.org/debian sid/main amd64 python3-piqtree amd64 0.8.3-1+b1 [117 kB] Fetched 101 MB in 3s (31.7 MB/s) Selecting previously unselected package libcap2:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10736 files and directories currently installed.) Preparing to unpack .../libcap2_1%3a2.78-1+b1_amd64.deb ... Unpacking libcap2:amd64 (1:2.78-1+b1) ... Setting up libcap2:amd64 (1:2.78-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../coreutils_9.12-0.3_amd64.deb ... Unpacking coreutils (9.12-0.3) over (9.10-1) ... Setting up coreutils (9.12-0.3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../tar_1.35+dfsg-7_amd64.deb ... Unpacking tar (1.35+dfsg-7) over (1.35+dfsg-6) ... Setting up tar (1.35+dfsg-7) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../libgomp1_16.2.0-4_amd64.deb ... Unpacking libgomp1:amd64 (16.2.0-4) over (16.2.0-3) ... Preparing to unpack .../libgfortran5_16.2.0-4_amd64.deb ... Unpacking libgfortran5:amd64 (16.2.0-4) over (16.2.0-3) ... Preparing to unpack .../gcc-16-base_16.2.0-4_amd64.deb ... Unpacking gcc-16-base:amd64 (16.2.0-4) over (16.2.0-3) ... Setting up gcc-16-base:amd64 (16.2.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../libgcc-s1_16.2.0-4_amd64.deb ... Unpacking libgcc-s1:amd64 (16.2.0-4) over (16.2.0-3) ... Setting up libgcc-s1:amd64 (16.2.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../libstdc++6_16.2.0-4_amd64.deb ... Unpacking libstdc++6:amd64 (16.2.0-4) over (16.2.0-3) ... Setting up libstdc++6:amd64 (16.2.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../libsystemd0_262.1-1_amd64.deb ... Unpacking libsystemd0:amd64 (262.1-1) over (262-1) ... Setting up libsystemd0:amd64 (262.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../libudev1_262.1-1_amd64.deb ... Unpacking libudev1:amd64 (262.1-1) over (262-1) ... Setting up libudev1:amd64 (262.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../zlib1g_1%3a1.3.dfsg+really1.3.2-4_amd64.deb ... Unpacking zlib1g:amd64 (1:1.3.dfsg+really1.3.2-4) over (1:1.3.dfsg+really1.3.2-3) ... Setting up zlib1g:amd64 (1:1.3.dfsg+really1.3.2-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../libapt-pkg7.0_3.3.5_amd64.deb ... Unpacking libapt-pkg7.0:amd64 (3.3.5) over (3.3.3) ... Setting up libapt-pkg7.0:amd64 (3.3.5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../archives/apt_3.3.5_amd64.deb ... Unpacking apt (3.3.5) over (3.3.3) ... Setting up apt (3.3.5) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10745 files and directories currently installed.) Preparing to unpack .../python3-cogent3_2026.10.15-1_amd64.deb ... Unpacking python3-cogent3 (2026.10.15-1) over (2026.6.2a0+dfsg-3) ... Preparing to unpack .../python3-minimal_3.14.8-1_amd64.deb ... Unpacking python3-minimal (3.14.8-1) over (3.14.7-3) ... Setting up python3-minimal (3.14.8-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10738 files and directories currently installed.) Preparing to unpack .../00-python3_3.14.8-1_amd64.deb ... Unpacking python3 (3.14.8-1) over (3.14.7-3) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../01-libedit2_3.1-20260512-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20260512-1) ... Selecting previously unselected package libxml2-16:amd64. Preparing to unpack .../02-libxml2-16_2.15.4+dfsg-1+b1_amd64.deb ... Unpacking libxml2-16:amd64 (2.15.4+dfsg-1+b1) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../03-libz3-4_4.13.3-1.1_amd64.deb ... Unpacking libz3-4:amd64 (4.13.3-1.1) ... Selecting previously unselected package libllvm22:amd64. Preparing to unpack .../04-libllvm22_1%3a22.1.8-3_amd64.deb ... Unpacking libllvm22:amd64 (1:22.1.8-3) ... Selecting previously unselected package llvm-22-runtime. Preparing to unpack .../05-llvm-22-runtime_1%3a22.1.8-3_amd64.deb ... Unpacking llvm-22-runtime (1:22.1.8-3) ... Selecting previously unselected package llvm-22-linker-tools. Preparing to unpack .../06-llvm-22-linker-tools_1%3a22.1.8-3_amd64.deb ... Unpacking llvm-22-linker-tools (1:22.1.8-3) ... Selecting previously unselected package libnghttp3-9:amd64. Preparing to unpack .../07-libnghttp3-9_1.17.0-1_amd64.deb ... Unpacking libnghttp3-9:amd64 (1.17.0-1) ... Selecting previously unselected package libngtcp2-16:amd64. Preparing to unpack .../08-libngtcp2-16_1.24.0-1_amd64.deb ... Unpacking libngtcp2-16:amd64 (1.24.0-1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../09-libbrotli1_1.2.0-4.1_amd64.deb ... Unpacking libbrotli1:amd64 (1.2.0-4.1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../10-libkrb5support0_1.22.1-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.22.1-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../11-libcom-err2_1.47.4-1+b2_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.4-1+b2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../12-libk5crypto3_1.22.1-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.22.1-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../13-libkeyutils1_1.6.3-6+b2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-6+b2) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../14-libkrb5-3_1.22.1-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.22.1-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../15-libgssapi-krb5-2_1.22.1-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.22.1-3) ... Selecting previously unselected package libunistring5:amd64. Preparing to unpack .../16-libunistring5_1.4.2-1_amd64.deb ... Unpacking libunistring5:amd64 (1.4.2-1) ... Selecting previously unselected package libidn2-0:amd64. Preparing to unpack .../17-libidn2-0_2.3.8-5_amd64.deb ... Unpacking libidn2-0:amd64 (2.3.8-5) ... Preparing to unpack .../18-libdb5.3t64_5.3.28+dfsg2-12_amd64.deb ... Unpacking libdb5.3t64:amd64 (5.3.28+dfsg2-12) over (5.3.28+dfsg2-11+b1) ... Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-12) ... Selecting previously unselected package libsasl2-modules-db:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10906 files and directories currently installed.) Preparing to unpack .../00-libsasl2-modules-db_2.1.28+dfsg1-12_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-12) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../01-libsasl2-2_2.1.28+dfsg1-12_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-12) ... Selecting previously unselected package libldap2:amd64. Preparing to unpack .../02-libldap2_2.6.14+dfsg-2_amd64.deb ... Unpacking libldap2:amd64 (2.6.14+dfsg-2) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../03-libnghttp2-14_1.70.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.70.0-1) ... Selecting previously unselected package libngtcp2-crypto-ossl0:amd64. Preparing to unpack .../04-libngtcp2-crypto-ossl0_1.24.0-1_amd64.deb ... Unpacking libngtcp2-crypto-ossl0:amd64 (1.24.0-1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../05-libpsl5t64_0.23.3-1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.23.3-1) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../06-libssh2-1t64_1.11.1-6_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.1-6) ... Selecting previously unselected package libcurl4t64:amd64. Preparing to unpack .../07-libcurl4t64_8.23.0-1_amd64.deb ... Unpacking libcurl4t64:amd64 (8.23.0-1) ... Selecting previously unselected package libpfm4:amd64. Preparing to unpack .../08-libpfm4_4.13.0+git106-g3e4031b-1+b2_amd64.deb ... Unpacking libpfm4:amd64 (4.13.0+git106-g3e4031b-1+b2) ... Selecting previously unselected package llvm-22. Preparing to unpack .../09-llvm-22_1%3a22.1.8-3_amd64.deb ... Unpacking llvm-22 (1:22.1.8-3) ... Preparing to unpack .../10-python3-llvmlite_0.50.0-0.2_amd64.deb ... Unpacking python3-llvmlite (0.50.0-0.2) over (0.47.0-0.1) ... Preparing to unpack .../11-python3-numba_0.68.1+ds-1_amd64.deb ... Unpacking python3-numba (0.68.1+ds-1) over (0.65.1+dfsg-3+b1) ... Preparing to unpack .../12-python3-scinexus_2026.10.2-1_all.deb ... Unpacking python3-scinexus (2026.10.2-1) over (2026.7.2-1) ... Preparing to unpack .../13-libpython3-stdlib_3.14.8-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.14.8-1) over (3.14.7-3) ... Preparing to unpack .../14-libaudit-common_1%3a4.2.1-1_all.deb ... Unpacking libaudit-common (1:4.2.1-1) over (1:4.1.2-1) ... Setting up libaudit-common (1:4.2.1-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11251 files and directories currently installed.) Preparing to unpack .../libaudit1_1%3a4.2.1-1+b1_amd64.deb ... Unpacking libaudit1:amd64 (1:4.2.1-1+b1) over (1:4.1.2-1+b2) ... Setting up libaudit1:amd64 (1:4.2.1-1+b1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11251 files and directories currently installed.) Preparing to unpack .../libpcre2-8-0_10.49-1_amd64.deb ... Unpacking libpcre2-8-0:amd64 (10.49-1) over (10.48-3.1) ... Setting up libpcre2-8-0:amd64 (10.49-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11251 files and directories currently installed.) Preparing to unpack .../python3-piqtree_0.8.3-1+b1_amd64.deb ... Unpacking python3-piqtree:amd64 (0.8.3-1+b1) over (0.8.3-1) ... Setting up libkeyutils1:amd64 (1.6.3-6+b2) ... Setting up libxml2-16:amd64 (2.15.4+dfsg-1+b1) ... Setting up libbrotli1:amd64 (1.2.0-4.1) ... Setting up libedit2:amd64 (3.1-20260512-1) ... Setting up libnghttp2-14:amd64 (1.70.0-1) ... Setting up libcom-err2:amd64 (1.47.4-1+b2) ... Setting up libgomp1:amd64 (16.2.0-4) ... Setting up libkrb5support0:amd64 (1.22.1-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-12) ... Setting up libz3-4:amd64 (4.13.3-1.1) ... Setting up libpfm4:amd64 (4.13.0+git106-g3e4031b-1+b2) ... Setting up libunistring5:amd64 (1.4.2-1) ... Setting up libk5crypto3:amd64 (1.22.1-3) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-12) ... Setting up libgfortran5:amd64 (16.2.0-4) ... Setting up libnghttp3-9:amd64 (1.17.0-1) ... Setting up libllvm22:amd64 (1:22.1.8-3) ... Setting up libngtcp2-16:amd64 (1.24.0-1) ... Setting up libkrb5-3:amd64 (1.22.1-3) ... Setting up libssh2-1t64:amd64 (1.11.1-6) ... Setting up libldap2:amd64 (2.6.14+dfsg-2) ... Setting up libpython3-stdlib:amd64 (3.14.8-1) ... Setting up llvm-22-runtime (1:22.1.8-3) ... Setting up python3 (3.14.8-1) ... Setting up libidn2-0:amd64 (2.3.8-5) ... Setting up llvm-22-linker-tools (1:22.1.8-3) ... Setting up libgssapi-krb5-2:amd64 (1.22.1-3) ... Setting up libngtcp2-crypto-ossl0:amd64 (1.24.0-1) ... Setting up python3-scinexus (2026.10.2-1) ... Setting up libpsl5t64:amd64 (0.23.3-1) ... Setting up libcurl4t64:amd64 (8.23.0-1) ... Setting up llvm-22 (1:22.1.8-3) ... Setting up python3-llvmlite (0.50.0-0.2) ... Setting up python3-numba (0.68.1+ds-1) ... Setting up python3-cogent3 (2026.10.15-1) ... Setting up python3-piqtree:amd64 (0.8.3-1+b1) ... Processing triggers for libselinux1:amd64 (3.11-2.1+b1) ... Processing triggers for libc-bin (2.43-7) ... 0m51.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-yf', 'dist-upgrade'] 0m51.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m53.2s DUMP: 2a1f4b722807828afe7b304e862de46a - 0m53.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m53.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'show', '--no-all-versions', 'python3-piqtree'] 0m53.4s DUMP: Package: python3-piqtree Source: python-piqtree (0.8.3-1) Version: 0.8.3-1+b1 Installed-Size: 612 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: python3 (<< 3.16), python3 (>= 3.14~), python3-citeable, python3-cogent3, python3-requests, python3-yaml, python3:any, libc6 (>= 2.34), libgcc-s1 (>= 3.0), libiqtree3 (>= 3.1.4+dfsg), libstdc++6 (>= 14) Suggests: python-piqtree-doc Description-en: Python interface for phylogenetic tree inference with IQ-TREE piqtree provides a Python interface to IQ-TREE for phylogenetic analysis. It allows phylogenetic trees to be inferred from sequence alignments using the IQ-TREE maximum-likelihood framework. Description-md5: afed89014e59228ba229cc33832a4cc7 Multi-Arch: same Homepage: https://github.com/iqtree/piqtree Section: python Priority: optional Filename: pool/main/p/python-piqtree/python3-piqtree_0.8.3-1+b1_amd64.deb Size: 116552 MD5sum: c07dba0994ff4b0c1bcf22ec25deb782 SHA256: e1474f71681ef20f52cdfbc0e38b1af2dc8731ac583eba05da50a6d2c02e2605 0m53.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'show', '--no-all-versions', 'python3-piqtree'] 0m53.4s INFO: apt-cache knows about the following packages: python3-piqtree 0m53.4s INFO: Running scripts pre_install 0m53.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_database-server'] 0m53.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_database-server'] 0m53.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_exceptions'] 0m53.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_exceptions'] 0m53.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_extras'] 0m53.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_extras'] 0m53.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture'] 0m53.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture'] 0m53.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m53.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m53.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy'] 0m53.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m53.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy'] 0m53.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy', 'python3-piqtree'] 0m53.5s DUMP: python3-piqtree: Installed: 0.8.3-1+b1 Candidate: 0.8.3-1+b1 Version table: *** 0.8.3-1+b1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m53.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy', 'python3-piqtree'] 0m53.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-y', 'install', 'python3-piqtree'] 0m54.0s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-piqtree is already the newest version (0.8.3-1+b1). Solving dependencies... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m54.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-y', 'install', 'python3-piqtree'] 0m54.0s INFO: Running scripts post_install 0m54.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_install_exceptions'] 0m54.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_install_exceptions'] 0m54.0s INFO: Running scripts post_distupgrade 0m54.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m54.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m54.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_exceptions'] 0m54.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_exceptions'] 0m54.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m54.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m54.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m54.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m54.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_zz_backports'] 0m54.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_distupgrade_zz_backports'] 0m54.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m55.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m55.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m56.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m56.0s INFO: Running scripts pre_install 0m56.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_database-server'] 0m56.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_database-server'] 0m56.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_exceptions'] 0m56.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_exceptions'] 0m56.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_extras'] 0m56.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_extras'] 0m56.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture'] 0m56.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture'] 0m56.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m56.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m56.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy'] 0m56.0s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m56.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy'] 0m56.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy', 'python3-piqtree'] 0m56.0s DUMP: python3-piqtree: Installed: 0.8.3-1+b1 Candidate: 0.8.3-1+b1 Version table: *** 0.8.3-1+b1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m56.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-cache', 'policy', 'python3-piqtree'] 0m56.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-y', 'install', 'python3-piqtree=0.8.3-1+b1'] 0m56.6s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-piqtree is already the newest version (0.8.3-1+b1). Solving dependencies... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m56.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', '-y', 'install', 'python3-piqtree=0.8.3-1+b1'] 0m56.6s INFO: Running scripts post_install 0m56.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_install_exceptions'] 0m56.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_install_exceptions'] 0m56.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m57.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 0m58.1s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', '-ac', '--ignore-obsolete'] 1m1.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', '-ac', '--ignore-obsolete'] 1m1.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m1.1s DUMP: 0.17.5+b5 1m1.1s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m1.1s INFO: Running adequate version 0.17.5+b5 now. 1m1.1s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'python3-piqtree'] 1m1.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'python3-piqtree'] 1m1.1s INFO: Running scripts pre_remove 1m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m1.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m1.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m1.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m1.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_exceptions'] 1m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/pre_remove_exceptions'] 1m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m2.8s DUMP: install ok installed apt apt 3.3.5 install ok installed base-files base-files 14.2 install ok installed base-passwd base-passwd 3.6.8 install ok installed bash bash 5.3-4 install ok installed bsdutils bsdutils 1:2.42.4-1 install ok installed ca-certificates ca-certificates 20260816+nmu1 install ok installed coreutils coreutils 9.12-0.3 install ok installed dash dash 0.5.12-12 install ok installed debconf debconf 1.5.92 install ok installed debian-archive-keyring debian-archive-keyring 2025.1 install ok installed debianutils debianutils 5.24 install ok installed diffutils diffutils 1:3.12-1 install ok installed dpkg dpkg 1.23.11 install ok installed findutils findutils 4.11.0-3 install ok installed gcc-16-base:amd64 gcc-16-base 16.2.0-4 install ok installed grep grep 3.12-1 install ok installed gzip gzip 1.14-1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.69+nmu3 install ok installed libacl1:amd64 libacl1 2.4.0-1 install ok installed libapt-pkg7.0:amd64 libapt-pkg7.0 3.3.5 install ok installed libattr1:amd64 libattr1 1:2.6.0-1 install ok installed libaudit-common libaudit-common 1:4.2.1-1 install ok installed libaudit1:amd64 libaudit1 1:4.2.1-1+b1 install ok installed libblas3:amd64 libblas3 3.12.1-8 install ok installed libblkid1:amd64 libblkid1 2.42.4-1 install ok installed libbrotli1:amd64 libbrotli1 1.2.0-4.1 install ok installed libbsd0:amd64 libbsd0 0.12.2-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6+b2 install ok installed libc-bin libc-bin 2.43-7 install ok installed libc-gconv-modules-extra:amd64 libc-gconv-modules-extra 2.43-7 install ok installed libc6:amd64 libc6 2.43-7 install ok installed libcap-ng0:amd64 libcap-ng0 0.9.6-1+b1 install ok installed libcap2:amd64 libcap2 1:2.78-1+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.4-1+b2 install ok installed libcrypt1:amd64 libcrypt1 1:4.5.2+20251210-1 install ok installed libcurl4t64:amd64 libcurl4t64 8.23.0-1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-12 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.283 install ok installed libedit2:amd64 libedit2 3.1-20260512-1 install ok installed libexpat1:amd64 libexpat1 2.9.0-1 install ok installed libffi8:amd64 libffi8 3.8.0-2 install ok installed libgcc-s1:amd64 libgcc-s1 16.2.0-4 install ok installed libgfortran5:amd64 libgfortran5 16.2.0-4 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-5+b2 install ok installed libgomp1:amd64 libgomp1 16.2.0-4 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.22.1-3 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10.2-1+b1 install ok installed libhwloc15:amd64 libhwloc15 2.15.0-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.8-5 install ok installed libiqtree3:amd64 libiqtree3 3.1.4+dfsg-2 install ok installed libk5crypto3:amd64 libk5crypto3 1.22.1-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-6+b2 install ok installed libkrb5-3:amd64 libkrb5-3 1.22.1-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.22.1-3 install ok installed liblapack3:amd64 liblapack3 3.12.1-8 install ok installed libldap2:amd64 libldap2 2.6.14+dfsg-2 install ok installed libllvm22:amd64 libllvm22 1:22.1.8-3 install ok installed liblsd2-0 liblsd2-0 1.9.9+dfsg-2 install ok installed liblz4-1:amd64 liblz4-1 1.10.0-10 install ok installed liblzma5:amd64 liblzma5 5.8.4-1 install ok installed libmd0:amd64 libmd0 1.3.0-1 install ok installed libmount1:amd64 libmount1 2.42.4-1 install ok installed libncursesw6:amd64 libncursesw6 6.6+20260608-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10.2-1+b1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.70.0-1 install ok installed libnghttp3-9:amd64 libnghttp3-9 1.17.0-1 install ok installed libngtcp2-16:amd64 libngtcp2-16 1.24.0-1 install ok installed libngtcp2-crypto-ossl0:amd64 libngtcp2-crypto-ossl0 1.24.0-1 install ok installed libpam-modules:amd64 libpam-modules 1.7.0-8 install ok installed libpam-modules-bin libpam-modules-bin 1.7.0-8 install ok installed libpam-runtime libpam-runtime 1.7.0-8 install ok installed libpam0g:amd64 libpam0g 1.7.0-8 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.49-1 install ok installed libpfm4:amd64 libpfm4 4.13.0+git106-g3e4031b-1+b2 install ok installed libpsl5t64:amd64 libpsl5t64 0.23.3-1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.14.8-1 install ok installed libpython3.14-minimal:amd64 libpython3.14-minimal 3.14.10-1 install ok installed libpython3.14-stdlib:amd64 libpython3.14-stdlib 3.14.10-1 install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-9 install ok installed libreadline8t64:amd64 libreadline8t64 8.3-4 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-12 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-12 install ok installed libseccomp2:amd64 libseccomp2 2.6.1-1+b2 install ok installed libselinux1:amd64 libselinux1 3.11-2.1+b1 install ok installed libsemanage-common libsemanage-common 3.11-1 install ok installed libsemanage2:amd64 libsemanage2 3.11-1+b2 install ok installed libsepol2:amd64 libsepol2 3.11-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.42.4-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.53.4-2 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.1-6 install ok installed libssl3t64:amd64 libssl3t64 3.6.5-1 install ok installed libstdc++6:amd64 libstdc++6 16.2.0-4 install ok installed libsystemd0:amd64 libsystemd0 262.1-1 install ok installed libtbb12:amd64 libtbb12 2023.1.0-3 install ok installed libtbbbind-2-5:amd64 libtbbbind-2-5 2023.1.0-3 install ok installed libtbbmalloc2:amd64 libtbbmalloc2 2023.1.0-3 install ok installed libtinfo6:amd64 libtinfo6 6.6+20260608-2 install ok installed libudev1:amd64 libudev1 262.1-1 install ok installed libunistring5:amd64 libunistring5 1.4.2-1 install ok installed libuuid1:amd64 libuuid1 2.42.4-1 install ok installed libxml2-16:amd64 libxml2-16 2.15.4+dfsg-1+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.3-2+b2 install ok installed libyaml-0-2:amd64 libyaml-0-2 0.2.5-2+b1 install ok installed libyaml-cpp0.9:amd64 libyaml-cpp0.9 0.9.0+dfsg-10 install ok installed libz3-4:amd64 libz3-4 4.13.3-1.1 install ok installed libzstd1:amd64 libzstd1 1.5.7+dfsg-4 install ok installed llvm-22 llvm-22 1:22.1.8-3 install ok installed llvm-22-linker-tools llvm-22-linker-tools 1:22.1.8-3 install ok installed llvm-22-runtime llvm-22-runtime 1:22.1.8-3 install ok installed login login 1:4.16.0-2+really2.42.4-1 install ok installed login.defs login.defs 1:4.20.3-1 install ok installed mawk mawk 1.3.4.20260302-2 install ok installed media-types media-types 14.0.0 install ok installed mount mount 2.42.4-1 install ok installed ncurses-base ncurses-base 6.6+20260608-2 install ok installed ncurses-bin ncurses-bin 6.6+20260608-2 install ok installed netbase netbase 6.6 install ok installed openssl openssl 3.6.5-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.6.5-1 install ok installed passwd passwd 1:4.20.3-1 install ok installed perl-base perl-base 5.42.3-1 install ok installed python3 python3 3.14.8-1 install ok installed python3-certifi python3-certifi 2026.10.23+ds-1 install ok installed python3-chardet python3-chardet 5.2.0+dfsg-2 install ok installed python3-charset-normalizer python3-charset-normalizer 3.4.7-2+b3 install ok installed python3-citeable python3-citeable 2026.10.15-1 install ok installed python3-cogent3 python3-cogent3 2026.10.15-1 install ok installed python3-decorator python3-decorator 5.3.1-1 install ok installed python3-idna python3-idna 3.20-1 install ok installed python3-llvmlite python3-llvmlite 0.50.0-0.2 install ok installed python3-minimal python3-minimal 3.14.8-1 install ok installed python3-numba python3-numba 0.68.1+ds-1 install ok installed python3-numpy python3-numpy 1:2.4.6+ds-5+b1 install ok installed python3-numpy-dev:amd64 python3-numpy-dev 1:2.4.6+ds-5+b1 install ok installed python3-piqtree:amd64 python3-piqtree 0.8.3-1+b1 install ok installed python3-requests python3-requests 2.34.2-1 install ok installed python3-scinexus python3-scinexus 2026.10.2-1 install ok installed python3-scipy python3-scipy 1.17.1-5+b2 install ok installed python3-scitrack python3-scitrack 2026.6.24-3 install ok installed python3-stevedore python3-stevedore 5.9.1-4 install ok installed python3-tqdm python3-tqdm 4.70.1-1 install ok installed python3-typeguard python3-typeguard 4.6.0-1 install ok installed python3-typing-extensions python3-typing-extensions 4.16.0-5 install ok installed python3-urllib3 python3-urllib3 2.8.0-2 install ok installed python3-yaml python3-yaml 6.0.3-1+b2 install ok installed python3.14 python3.14 3.14.10-1 install ok installed python3.14-minimal python3.14-minimal 3.14.10-1 install ok installed readline-common readline-common 8.3-4 install ok installed sed sed 4.9-3 install ok installed sqv sqv 1.5.0-1 install ok installed sysvinit-utils sysvinit-utils 3.18-1 install ok installed tar tar 1.35+dfsg-7 install ok installed tzdata tzdata 2026f-1 install ok installed util-linux util-linux 2.42.4-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.2-4 1m2.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m2.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', 'remove', '--allow-remove-essential', 'ca-certificates', 'libblas3:amd64', 'libbrotli1:amd64', 'libcom-err2:amd64', 'libcurl4t64:amd64', 'libedit2:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhwloc15:amd64', 'libidn2-0:amd64', 'libiqtree3:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'libllvm22:amd64', 'liblsd2-0', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libpfm4:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libunistring5:amd64', 'libxml2-16:amd64', 'libyaml-0-2:amd64', 'libyaml-cpp0.9:amd64', 'libz3-4:amd64', 'llvm-22', 'llvm-22-linker-tools', 'llvm-22-runtime', 'media-types', 'netbase', 'openssl', 'python3', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-citeable', 'python3-cogent3', 'python3-decorator', 'python3-idna', 'python3-llvmlite', 'python3-minimal', 'python3-numba', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-piqtree:amd64', 'python3-requests', 'python3-scinexus', 'python3-scipy', 'python3-scitrack', 'python3-stevedore', 'python3-tqdm', 'python3-typeguard', 'python3-typing-extensions', 'python3-urllib3', 'python3-yaml', 'python3.14', 'python3.14-minimal', 'readline-common'] 1m7.9s DUMP: Reading package lists... Building dependency tree... Reading state information... Solving dependencies... The following packages will be REMOVED: ca-certificates libblas3 libbrotli1 libcom-err2 libcurl4t64 libedit2 libexpat1 libffi8 libgfortran5 libgomp1 libgssapi-krb5-2 libhwloc15 libidn2-0 libiqtree3 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap2 libllvm22 liblsd2-0 libncursesw6 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-ossl0 libpfm4 libpsl5t64 libpython3-stdlib libpython3.14-minimal libpython3.14-stdlib libqhull-r8.0 libreadline8t64 libsasl2-2 libsasl2-modules-db libsqlite3-0 libssh2-1t64 libtbb12 libtbbbind-2-5 libtbbmalloc2 libunistring5 libxml2-16 libyaml-0-2 libyaml-cpp0.9 libz3-4 llvm-22 llvm-22-linker-tools llvm-22-runtime media-types netbase openssl python3 python3-certifi python3-chardet python3-charset-normalizer python3-citeable python3-cogent3 python3-decorator python3-idna python3-llvmlite python3-minimal python3-numba python3-numpy python3-numpy-dev python3-piqtree python3-requests python3-scinexus python3-scipy python3-scitrack python3-stevedore python3-tqdm python3-typeguard python3-typing-extensions python3-urllib3 python3-yaml python3.14 python3.14-minimal readline-common 0 upgraded, 0 newly installed, 79 to remove and 0 not upgraded. After this operation, 652 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11253 files and directories currently installed.) Removing python3-piqtree:amd64 (0.8.3-1+b1) ... Removing python3-requests (2.34.2-1) ... Removing python3-certifi (2026.10.23+ds-1) ... Removing ca-certificates (20260816+nmu1) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing python3-cogent3 (2026.10.15-1) ... Removing python3-numba (0.68.1+ds-1) ... Removing python3-scipy (1.17.1-5+b2) ... Removing python3-numpy (1:2.4.6+ds-5+b1) ... Removing liblapack3:amd64 (3.12.1-8) ... Removing libblas3:amd64 (3.12.1-8) ... Removing python3-llvmlite (0.50.0-0.2) ... Removing llvm-22 (1:22.1.8-3) ... Removing libcurl4t64:amd64 (8.23.0-1) ... Removing libbrotli1:amd64 (1.2.0-4.1) ... Removing libgssapi-krb5-2:amd64 (1.22.1-3) ... Removing libkrb5-3:amd64 (1.22.1-3) ... Removing libcom-err2:amd64 (1.47.4-1+b2) ... Removing llvm-22-runtime (1:22.1.8-3) ... Removing llvm-22-linker-tools (1:22.1.8-3) ... Removing libllvm22:amd64 (1:22.1.8-3) ... Removing libedit2:amd64 (3.1-20260512-1) ... Removing python3-yaml (6.0.3-1+b2) ... Removing python3-scinexus (2026.10.2-1) ... Removing python3-tqdm (4.70.1-1) ... Removing python3-charset-normalizer (3.4.7-2+b3) ... Removing python3-stevedore (5.9.1-4) ... Removing libgfortran5:amd64 (16.2.0-4) ... Removing libiqtree3:amd64 (3.1.4+dfsg-2) ... Removing libgomp1:amd64 (16.2.0-4) ... Removing libtbb12:amd64 (2023.1.0-3) ... Removing libtbbbind-2-5:amd64 (2023.1.0-3) ... Removing libhwloc15:amd64 (2.15.0-2) ... Removing libpsl5t64:amd64 (0.23.3-1) ... Removing libidn2-0:amd64 (2.3.8-5) ... Removing libk5crypto3:amd64 (1.22.1-3) ... Removing libkeyutils1:amd64 (1.6.3-6+b2) ... Removing libkrb5support0:amd64 (1.22.1-3) ... Removing libldap2:amd64 (2.6.14+dfsg-2) ... Removing liblsd2-0 (1.9.9+dfsg-2) ... Removing libnghttp2-14:amd64 (1.70.0-1) ... Removing libnghttp3-9:amd64 (1.17.0-1) ... Removing libngtcp2-crypto-ossl0:amd64 (1.24.0-1) ... Removing libngtcp2-16:amd64 (1.24.0-1) ... Removing libpfm4:amd64 (4.13.0+git106-g3e4031b-1+b2) ... Removing libqhull-r8.0:amd64 (2020.2-9) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-12) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-12) ... Removing libssh2-1t64:amd64 (1.11.1-6) ... Removing libtbbmalloc2:amd64 (2023.1.0-3) ... Removing libunistring5:amd64 (1.4.2-1) ... Removing libxml2-16:amd64 (2.15.4+dfsg-1+b1) ... Removing libyaml-0-2:amd64 (0.2.5-2+b1) ... Removing libyaml-cpp0.9:amd64 (0.9.0+dfsg-10) ... Removing libz3-4:amd64 (4.13.3-1.1) ... Removing openssl (3.6.5-1) ... Removing python3-chardet (5.2.0+dfsg-2) ... Removing python3-citeable (2026.10.15-1) ... Removing python3-decorator (5.3.1-1) ... Removing python3-idna (3.20-1) ... Removing python3-numpy-dev:amd64 (1:2.4.6+ds-5+b1) ... Removing python3-scitrack (2026.6.24-3) ... Removing python3-typeguard (4.6.0-1) ... Removing python3-typing-extensions (4.16.0-5) ... Removing python3-urllib3 (2.8.0-2) ... Removing python3 (3.14.8-1) ... Removing python3.14 (3.14.10-1) ... Removing python3-minimal (3.14.8-1) ... Removing python3.14-minimal (3.14.10-1) ... Removing libexpat1:amd64 (2.9.0-1) ... Removing libpython3-stdlib:amd64 (3.14.8-1) ... Removing libpython3.14-stdlib:amd64 (3.14.10-1) ... find: '/usr/lib/python3': No such file or directory Removing libffi8:amd64 (3.8.0-2) ... Removing libncursesw6:amd64 (6.6+20260608-2) ... Removing libpython3.14-minimal:amd64 (3.14.10-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.3-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsqlite3-0:amd64 (3.53.4-2) ... Removing media-types (14.0.0) ... Removing netbase (6.6) ... Removing readline-common (8.3-4) ... Processing triggers for libc-bin (2.43-7) ... 1m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', 'remove', '--allow-remove-essential', 'ca-certificates', 'libblas3:amd64', 'libbrotli1:amd64', 'libcom-err2:amd64', 'libcurl4t64:amd64', 'libedit2:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhwloc15:amd64', 'libidn2-0:amd64', 'libiqtree3:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'libllvm22:amd64', 'liblsd2-0', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libpfm4:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libunistring5:amd64', 'libxml2-16:amd64', 'libyaml-0-2:amd64', 'libyaml-cpp0.9:amd64', 'libz3-4:amd64', 'llvm-22', 'llvm-22-linker-tools', 'llvm-22-runtime', 'media-types', 'netbase', 'openssl', 'python3', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-citeable', 'python3-cogent3', 'python3-decorator', 'python3-idna', 'python3-llvmlite', 'python3-minimal', 'python3-numba', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-piqtree:amd64', 'python3-requests', 'python3-scinexus', 'python3-scipy', 'python3-scitrack', 'python3-stevedore', 'python3-tqdm', 'python3-typeguard', 'python3-typing-extensions', 'python3-urllib3', 'python3-yaml', 'python3.14', 'python3.14-minimal', 'readline-common'] 1m7.9s INFO: Running scripts post_remove 1m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_remove_exceptions'] 1m7.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_remove_exceptions'] 1m7.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg', '--purge', 'ca-certificates', 'libblas3:amd64', 'libbrotli1:amd64', 'libcom-err2:amd64', 'libcurl4t64:amd64', 'libedit2:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhwloc15:amd64', 'libidn2-0:amd64', 'libiqtree3:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'libllvm22:amd64', 'liblsd2-0', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libpfm4:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libunistring5:amd64', 'libxml2-16:amd64', 'libyaml-0-2:amd64', 'libyaml-cpp0.9:amd64', 'libz3-4:amd64', 'llvm-22', 'llvm-22-linker-tools', 'llvm-22-runtime', 'media-types', 'netbase', 'openssl', 'python3', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-citeable', 'python3-cogent3', 'python3-decorator', 'python3-idna', 'python3-llvmlite', 'python3-minimal', 'python3-numba', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-piqtree:amd64', 'python3-requests', 'python3-scinexus', 'python3-scipy', 'python3-scitrack', 'python3-stevedore', 'python3-tqdm', 'python3-typeguard', 'python3-typing-extensions', 'python3-urllib3', 'python3-yaml', 'python3.14', 'python3.14-minimal', 'readline-common'] 1m8.1s DUMP: (Reading database ... 4970 files and directories currently installed.) Purging configuration files for ca-certificates (20260816+nmu1) ... Removing dangling symlinks from /etc/ssl/certs... done. dpkg: warning: ignoring request to remove libblas3 which is not installed dpkg: warning: ignoring request to remove libbrotli1 which is not installed dpkg: warning: ignoring request to remove libcom-err2 which is not installed dpkg: warning: ignoring request to remove libcurl4t64 which is not installed dpkg: warning: ignoring request to remove libedit2 which is not installed dpkg: warning: ignoring request to remove libexpat1 which is not installed dpkg: warning: ignoring request to remove libffi8 which is not installed dpkg: warning: ignoring request to remove libgfortran5 which is not installed dpkg: warning: ignoring request to remove libgomp1 which is not installed Purging configuration files for libgssapi-krb5-2:amd64 (1.22.1-3) ... dpkg: warning: ignoring request to remove libhwloc15 which is not installed dpkg: warning: ignoring request to remove libidn2-0 which is not installed dpkg: warning: ignoring request to remove libiqtree3 which is not installed dpkg: warning: ignoring request to remove libk5crypto3 which is not installed dpkg: warning: ignoring request to remove libkeyutils1 which is not installed dpkg: warning: ignoring request to remove libkrb5-3 which is not installed dpkg: warning: ignoring request to remove libkrb5support0 which is not installed dpkg: warning: ignoring request to remove liblapack3 which is not installed dpkg: warning: ignoring request to remove libldap2 which is not installed dpkg: warning: ignoring request to remove libllvm22 which is not installed dpkg: warning: ignoring request to remove liblsd2-0 which is not installed dpkg: warning: ignoring request to remove libncursesw6 which is not installed dpkg: warning: ignoring request to remove libnghttp2-14 which is not installed dpkg: warning: ignoring request to remove libnghttp3-9 which is not installed dpkg: warning: ignoring request to remove libngtcp2-16 which is not installed dpkg: warning: ignoring request to remove libngtcp2-crypto-ossl0 which is not installed dpkg: warning: ignoring request to remove libpfm4 which is not installed dpkg: warning: ignoring request to remove libpsl5t64 which is not installed dpkg: warning: ignoring request to remove libpython3-stdlib which is not installed Purging configuration files for libpython3.14-minimal:amd64 (3.14.10-1) ... dpkg: warning: ignoring request to remove libpython3.14-stdlib which is not installed dpkg: warning: ignoring request to remove libqhull-r8.0 which is not installed Purging configuration files for libreadline8t64:amd64 (8.3-4) ... dpkg: warning: ignoring request to remove libsasl2-2 which is not installed dpkg: warning: ignoring request to remove libsasl2-modules-db which is not installed dpkg: warning: ignoring request to remove libsqlite3-0 which is not installed dpkg: warning: ignoring request to remove libssh2-1t64 which is not installed dpkg: warning: ignoring request to remove libtbb12 which is not installed dpkg: warning: ignoring request to remove libtbbbind-2-5 which is not installed dpkg: warning: ignoring request to remove libtbbmalloc2 which is not installed dpkg: warning: ignoring request to remove libunistring5 which is not installed dpkg: warning: ignoring request to remove libxml2-16 which is not installed dpkg: warning: ignoring request to remove libyaml-0-2 which is not installed dpkg: warning: ignoring request to remove libyaml-cpp0.9 which is not installed dpkg: warning: ignoring request to remove libz3-4 which is not installed dpkg: warning: ignoring request to remove llvm-22 which is not installed dpkg: warning: ignoring request to remove llvm-22-linker-tools which is not installed dpkg: warning: ignoring request to remove llvm-22-runtime which is not installed Purging configuration files for media-types (14.0.0) ... Purging configuration files for netbase (6.6) ... Purging configuration files for openssl (3.6.5-1) ... Purging configuration files for python3 (3.14.8-1) ... dpkg: warning: ignoring request to remove python3-certifi which is not installed dpkg: warning: ignoring request to remove python3-chardet which is not installed dpkg: warning: ignoring request to remove python3-charset-normalizer which is not installed dpkg: warning: ignoring request to remove python3-citeable which is not installed dpkg: warning: ignoring request to remove python3-cogent3 which is not installed dpkg: warning: ignoring request to remove python3-decorator which is not installed dpkg: warning: ignoring request to remove python3-idna which is not installed dpkg: warning: ignoring request to remove python3-llvmlite which is not installed dpkg: warning: ignoring request to remove python3-minimal which is not installed dpkg: warning: ignoring request to remove python3-numba which is not installed Purging configuration files for python3-numpy (1:2.4.6+ds-5+b1) ... dpkg: warning: ignoring request to remove python3-numpy-dev which is not installed dpkg: warning: ignoring request to remove python3-piqtree which is not installed dpkg: warning: ignoring request to remove python3-requests which is not installed dpkg: warning: ignoring request to remove python3-scinexus which is not installed dpkg: warning: ignoring request to remove python3-scipy which is not installed dpkg: warning: ignoring request to remove python3-scitrack which is not installed dpkg: warning: ignoring request to remove python3-stevedore which is not installed dpkg: warning: ignoring request to remove python3-tqdm which is not installed dpkg: warning: ignoring request to remove python3-typeguard which is not installed dpkg: warning: ignoring request to remove python3-typing-extensions which is not installed dpkg: warning: ignoring request to remove python3-urllib3 which is not installed dpkg: warning: ignoring request to remove python3-yaml which is not installed dpkg: warning: ignoring request to remove python3.14 which is not installed Purging configuration files for python3.14-minimal (3.14.10-1) ... Purging configuration files for readline-common (8.3-4) ... 1m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg', '--purge', 'ca-certificates', 'libblas3:amd64', 'libbrotli1:amd64', 'libcom-err2:amd64', 'libcurl4t64:amd64', 'libedit2:amd64', 'libexpat1:amd64', 'libffi8:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgssapi-krb5-2:amd64', 'libhwloc15:amd64', 'libidn2-0:amd64', 'libiqtree3:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap2:amd64', 'libllvm22:amd64', 'liblsd2-0', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-ossl0:amd64', 'libpfm4:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.14-minimal:amd64', 'libpython3.14-stdlib:amd64', 'libqhull-r8.0:amd64', 'libreadline8t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libunistring5:amd64', 'libxml2-16:amd64', 'libyaml-0-2:amd64', 'libyaml-cpp0.9:amd64', 'libz3-4:amd64', 'llvm-22', 'llvm-22-linker-tools', 'llvm-22-runtime', 'media-types', 'netbase', 'openssl', 'python3', 'python3-certifi', 'python3-chardet', 'python3-charset-normalizer', 'python3-citeable', 'python3-cogent3', 'python3-decorator', 'python3-idna', 'python3-llvmlite', 'python3-minimal', 'python3-numba', 'python3-numpy', 'python3-numpy-dev:amd64', 'python3-piqtree:amd64', 'python3-requests', 'python3-scinexus', 'python3-scipy', 'python3-scitrack', 'python3-stevedore', 'python3-tqdm', 'python3-typeguard', 'python3-typing-extensions', 'python3-urllib3', 'python3-yaml', 'python3.14', 'python3.14-minimal', 'readline-common'] 1m8.1s INFO: Running scripts post_purge 1m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_purge_exceptions'] 1m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_purge_exceptions'] 1m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg', '--purge', '--pending'] 1m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg', '--purge', '--pending'] 1m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg', '--remove', '--pending'] 1m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg', '--remove', '--pending'] 1m8.1s INFO: Running scripts post_test 1m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_test_exceptions'] 1m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'tmp/scripts/post_test_exceptions'] 1m8.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 1m8.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 1m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg-divert', '--list'] 1m8.5s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 1m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'dpkg-divert', '--list'] 1m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', 'clean'] 1m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp_zeipvww', 'apt-get', 'clean'] 1m8.6s DEBUG: Recording chroot state 1m9.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/shm'] 1m9.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/shm'] 1m9.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/console'] 1m9.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/console'] 1m9.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/ptmx'] 1m9.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/ptmx'] 1m9.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/pts'] 1m9.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/dev/pts'] 1m9.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/proc'] 1m10.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp_zeipvww/proc'] 1m10.0s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 1m10.1s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp_zeipvww'] 1m10.1s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp_zeipvww 1m10.1s INFO: PASS: Upgrading between Debian distributions. 1m10.1s INFO: PASS: All tests. 1m10.1s INFO: piuparts run ends. ret=0 End: 2026-11-02 15:34:24 GMT