Start: 2022-11-27 21:15:32 GMT [testing] Package: python3-weblogo Source: python-weblogo Version: 3.7.12-4 Installed-Size: 563 Maintainer: Debian Python Team Architecture: all Depends: libjs-bootstrap, python3-numpy, python3-pkg-resources, python3-scipy, python3:any Description: sequence logo generator Homepage: https://github.com/WebLogo/weblogo Description-md5: 3807a3bf703afdece90c3f38418116bc Section: science Priority: optional Filename: pool/main/p/python-weblogo/python3-weblogo_3.7.12-4_all.deb Size: 112208 MD5sum: dfa1f0b165a9881aa5f61f24d26bbab5 SHA256: 6047205772b6f5031d947c250ed5d02aaa15bc913d57cee5732af947fdd4f501 [sid] Package: python3-weblogo Source: python-weblogo Version: 3.7.12-5 Installed-Size: 563 Maintainer: Debian Python Team Architecture: all Depends: libjs-bootstrap, python3-numpy, python3-pkg-resources, python3-scipy, python3:any Description: sequence logo generator Homepage: https://github.com/WebLogo/weblogo Description-md5: 3807a3bf703afdece90c3f38418116bc Section: science Priority: optional Filename: pool/main/p/python-weblogo/python3-weblogo_3.7.12-5_all.deb Size: 112380 MD5sum: 4532266181d5df57dfb34d860039530f SHA256: 828e6a00784d6ed0696ae4d8537fd2a418ceb886106131ae7421dd2b0747c8f3 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-weblogo=3.7.12-5 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt python3-weblogo=3.7.12-5 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-19-amd64 #1 SMP Debian 5.10.149-2 (2022-10-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpzk57dzni 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpzk57dzni 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m2.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m2.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/proc'] 0m2.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/proc'] 0m2.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/pts'] 0m2.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/pts'] 0m2.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/ptmx'] 0m2.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/ptmx'] 0m2.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/console'] 0m2.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/console'] 0m2.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/shm'] 0m2.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/shm'] 0m2.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m2.3s DEBUG: Created policy-rc.d and chmodded it. 0m2.3s DEBUG: Created resolv.conf. 0m2.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpzk57dzni/tmp/scripts/ 0m2.3s INFO: Running scripts post_chroot_unpack 0m2.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', 'update'] 0m5.9s DUMP: Get:1 http://deb.debian.org/debian bookworm InRelease [164 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 Packages [8765 kB] Get:3 http://deb.debian.org/debian bookworm/main Translation-en [5922 kB] Fetched 14.9 MB in 3s (5329 kB/s) Reading package lists... 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', 'update'] 0m5.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-yf', 'dist-upgrade'] 0m8.4s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: bsdutils libblkid1 libdebconfclient0 libgcrypt20 libmount1 libsmartcols1 libuuid1 mount util-linux util-linux-extra 10 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2665 kB of archives. After this operation, 54.3 kB disk space will be freed. Get:1 http://deb.debian.org/debian bookworm/main amd64 bsdutils amd64 1:2.38.1-3 [93.9 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libsmartcols1 amd64 2.38.1-3 [106 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 util-linux-extra amd64 2.38.1-3 [110 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 util-linux amd64 2.38.1-3 [1177 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 mount amd64 2.38.1-3 [134 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 libblkid1 amd64 2.38.1-3 [147 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 libdebconfclient0 amd64 0.265 [7720 B] Get:8 http://deb.debian.org/debian bookworm/main amd64 libgcrypt20 amd64 1.10.1-3 [696 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libmount1 amd64 2.38.1-3 [165 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 libuuid1 amd64 2.38.1-3 [28.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2665 kB in 1s (4808 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8605 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.38.1-3_amd64.deb ... Unpacking bsdutils (1:2.38.1-3) over (1:2.38.1-1.1+b1) ... Setting up bsdutils (1:2.38.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8604 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.38.1-3_amd64.deb ... Unpacking libsmartcols1:amd64 (2.38.1-3) over (2.38.1-1.1+b1) ... Setting up libsmartcols1:amd64 (2.38.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8603 files and directories currently installed.) Preparing to unpack .../util-linux-extra_2.38.1-3_amd64.deb ... Unpacking util-linux-extra (2.38.1-3) over (2.38.1-1.1+b1) ... Setting up util-linux-extra (2.38.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8602 files and directories currently installed.) Preparing to unpack .../util-linux_2.38.1-3_amd64.deb ... Unpacking util-linux (2.38.1-3) over (2.38.1-1.1+b1) ... Setting up util-linux (2.38.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8600 files and directories currently installed.) Preparing to unpack .../mount_2.38.1-3_amd64.deb ... Unpacking mount (2.38.1-3) over (2.38.1-1.1+b1) ... Preparing to unpack .../libblkid1_2.38.1-3_amd64.deb ... Unpacking libblkid1:amd64 (2.38.1-3) over (2.38.1-1.1+b1) ... Setting up libblkid1:amd64 (2.38.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8597 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.265_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.265) over (0.264) ... Setting up libdebconfclient0:amd64 (0.265) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8597 files and directories currently installed.) Preparing to unpack .../libgcrypt20_1.10.1-3_amd64.deb ... Unpacking libgcrypt20:amd64 (1.10.1-3) over (1.10.1-2) ... Setting up libgcrypt20:amd64 (1.10.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8597 files and directories currently installed.) Preparing to unpack .../libmount1_2.38.1-3_amd64.deb ... Unpacking libmount1:amd64 (2.38.1-3) over (2.38.1-1.1+b1) ... Setting up libmount1:amd64 (2.38.1-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8596 files and directories currently installed.) Preparing to unpack .../libuuid1_2.38.1-3_amd64.deb ... Unpacking libuuid1:amd64 (2.38.1-3) over (2.38.1-1.1+b1) ... Setting up libuuid1:amd64 (2.38.1-3) ... Setting up mount (2.38.1-3) ... Processing triggers for libc-bin (2.36-5) ... 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-yf', 'dist-upgrade'] 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m8.8s DUMP: e7cd1990f207090c9072ee5a704928e4 - 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m8.8s INFO: Running scripts post_setup 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_dummy_users'] 0m9.6s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_dummy_users'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_forbid_home'] 0m9.6s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_forbid_home'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.6s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_minimize'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_minimize'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_zz_backports'] 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_setup_zz_backports'] 0m9.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.6s DUMP: install ok installed apt apt 2.5.4 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2-2+b1 install ok installed bsdutils bsdutils 1:2.38.1-3 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-9 install ok installed debconf debconf 1.5.79 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-1 install ok installed dpkg dpkg 1.21.9+b1 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1+b1 install ok installed findutils findutils 4.9.0-3 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-9 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.4 install ok installed libattr1:amd64 libattr1 1:2.5.1-1 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libblkid1:amd64 libblkid1 2.38.1-3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-5 install ok installed libc6:amd64 libc6 2.36-5 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.44-1 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.265 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-3 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-9 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.2.7-0.1 install ok installed libmount1:amd64 libmount1 2.38.1-3 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-5 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-5 install ok installed libpam-runtime libpam-runtime 1.5.2-5 install ok installed libpam0g:amd64 libpam0g 1.5.2-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-2 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b3 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b3 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-3 install ok installed libss2:amd64 libss2 1.46.6~rc1-1+b1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-9 install ok installed libsystemd0:amd64 libsystemd0 252.1-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.3+20220423-2 install ok installed libudev1:amd64 libudev1 252.1-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-3 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg-1 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1+b1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-3 install ok installed ncurses-base ncurses-base 6.3+20220423-2 install ok installed ncurses-bin ncurses-bin 6.3+20220423-2 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-4 install ok installed perl-base perl-base 5.36.0-4 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-4 install ok installed sed sed 4.8-1 install ok installed sysvinit-utils sysvinit-utils 3.05-7 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2022f-1 install ok installed usr-is-merged usr-is-merged 33 install ok installed usrmerge usrmerge 33 install ok installed util-linux util-linux 2.38.1-3 install ok installed util-linux-extra util-linux-extra 2.38.1-3 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-4.1 0m9.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.6s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m9.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 0m10.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 0m10.0s INFO: Running scripts is_testable 0m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/is_testable_uninstallable'] 0m10.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/is_testable_uninstallable'] 0m10.0s INFO: Running scripts pre_test 0m10.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_test_exceptions'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_test_exceptions'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_test_root_password'] 0m10.1s DUMP: New password: Retype new password: passwd: password updated successfully 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_test_root_password'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'show', '--no-all-versions', 'python3-weblogo'] 0m10.4s DUMP: Package: python3-weblogo Source: python-weblogo Version: 3.7.12-4 Installed-Size: 563 Maintainer: Debian Python Team Architecture: all Depends: libjs-bootstrap, python3-numpy, python3-pkg-resources, python3-scipy, python3:any Description-en: sequence logo generator WebLogo is a web based application designed to make the generation of sequence logos. . WebLogo can create output in several common graphics formats, including the bitmap formats GIF and PNG, suitable for on-screen display, and the vector formats EPS and PDF, more suitable for printing, publication, and further editing. Additional graphics options include bitmap resolution, titles, optional axis, and axis labels, antialiasing, error bars, and alternative symbol formats. . A sequence logo is a graphical representation of an amino acid or nucleic acid multiple sequence alignment. Each logo consists of stacks of symbols, one stack for each position in the sequence. The overall height of the stack indicates the sequence conservation at that position, while the height of symbols within the stack indicates the relative frequency of each amino or nucleic acid at that position. The width of the stack is proportional to the fraction of valid symbols in that position. Description-md5: 3807a3bf703afdece90c3f38418116bc Homepage: https://github.com/WebLogo/weblogo Section: science Priority: optional Filename: pool/main/p/python-weblogo/python3-weblogo_3.7.12-4_all.deb Size: 112208 MD5sum: dfa1f0b165a9881aa5f61f24d26bbab5 SHA256: 6047205772b6f5031d947c250ed5d02aaa15bc913d57cee5732af947fdd4f501 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'show', '--no-all-versions', 'python3-weblogo'] 0m10.4s INFO: apt-cache knows about the following packages: python3-weblogo 0m10.4s INFO: Running scripts pre_install 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_database-server'] 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_database-server'] 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_exceptions'] 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_exceptions'] 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_extras'] 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_extras'] 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy'] 0m10.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release o=Debian,a=testing,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m10.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy'] 0m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy', 'python3-weblogo'] 0m10.6s DUMP: python3-weblogo: Installed: (none) Candidate: 3.7.12-4 Version table: 3.7.12-4 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy', 'python3-weblogo'] 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-y', 'install', 'python3-weblogo'] 0m44.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-12 fonts-glyphicons-halflings g++ g++-12 gcc gcc-12 libasan8 libatomic1 libbinutils libblas3 libboost-dev libboost1.74-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libexpat1 libexpat1-dev libgcc-12-dev libgfortran5 libgomp1 libgprofng0 libgssapi-krb5-2 libisl23 libitm1 libjs-bootstrap libjs-jquery libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblsan0 libmpc3 libmpdec3 libmpfr6 libncursesw6 libnsl-dev libnsl2 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libpython3.11-minimal libpython3.11-stdlib libquadmath0 libreadline8 libsqlite3-0 libssl3 libstdc++-12-dev libtirpc-common libtirpc-dev libtirpc3 libtsan2 libubsan1 libxsimd-dev linux-libc-dev media-types python3 python3-all python3-all-dev python3-beniget python3-decorator python3-dev python3-distutils python3-gast python3-lib2to3 python3-minimal python3-numpy python3-pkg-resources python3-ply python3-pythran python3-scipy python3.10 python3.10-dev python3.10-minimal python3.11 python3.11-minimal readline-common rpcsvc-proto zlib1g-dev Suggested packages: binutils-doc cpp-doc gcc-12-locales cpp-12-doc g++-multilib g++-12-multilib gcc-12-doc gcc-multilib make manpages-dev autoconf automake libtool flex bison gdb gcc-doc gcc-12-multilib libboost-doc libboost1.74-doc libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev libboost-context1.74-dev libboost-contract1.74-dev libboost-coroutine1.74-dev libboost-date-time1.74-dev libboost-exception1.74-dev libboost-fiber1.74-dev libboost-filesystem1.74-dev libboost-graph1.74-dev libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev libboost-program-options1.74-dev libboost-python1.74-dev libboost-random1.74-dev libboost-regex1.74-dev libboost-serialization1.74-dev libboost-stacktrace1.74-dev libboost-system1.74-dev libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev libmpfrc++-dev libntl-dev libboost-nowide1.74-dev glibc-doc krb5-doc krb5-user libstdc++-12-doc libxsimd-doc python3-doc python3-tk python3-venv gfortran python-numpy-doc python3-pytest python3-setuptools python-ply-doc python-scipy-doc python3.10-venv python3.10-doc binfmt-support python3.11-venv python3.11-doc readline-doc Recommended packages: manpages manpages-dev libc-devtools javascript-common krb5-locales libgpm2 python3-pil The following NEW packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-12 fonts-glyphicons-halflings g++ g++-12 gcc gcc-12 libasan8 libatomic1 libbinutils libblas3 libboost-dev libboost1.74-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libexpat1 libexpat1-dev libgcc-12-dev libgfortran5 libgomp1 libgprofng0 libgssapi-krb5-2 libisl23 libitm1 libjs-bootstrap libjs-jquery libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblsan0 libmpc3 libmpdec3 libmpfr6 libncursesw6 libnsl-dev libnsl2 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libpython3.11-minimal libpython3.11-stdlib libquadmath0 libreadline8 libsqlite3-0 libssl3 libstdc++-12-dev libtirpc-common libtirpc-dev libtirpc3 libtsan2 libubsan1 libxsimd-dev linux-libc-dev media-types python3 python3-all python3-all-dev python3-beniget python3-decorator python3-dev python3-distutils python3-gast python3-lib2to3 python3-minimal python3-numpy python3-pkg-resources python3-ply python3-pythran python3-scipy python3-weblogo python3.10 python3.10-dev python3.10-minimal python3.11 python3.11-minimal readline-common rpcsvc-proto zlib1g-dev 0 upgraded, 98 newly installed, 0 to remove and 0 not upgraded. Need to get 132 MB of archives. After this operation, 726 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.7-1 [2008 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libpython3.10-minimal amd64 3.10.8-3 [784 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 python3.10-minimal amd64 3.10.8-3 [1951 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.10.6-1 [38.7 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 media-types all 8.0.0 [33.4 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 libmpdec3 amd64 2.5.1-2 [87.8 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 libncursesw6 amd64 6.3+20220423-2 [133 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-1 [32.2 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-1 [78.6 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-1 [15.7 kB] Get:12 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-1 [331 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-1 [134 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 libtirpc-common all 1.3.3+ds-1 [14.0 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.2 [68.5 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.2 [165 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 libsqlite3-0 amd64 3.40.0-1 [838 kB] Get:20 http://deb.debian.org/debian bookworm/main amd64 libpython3.10-stdlib amd64 3.10.8-3 [1685 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 python3.10 amd64 3.10.8-3 [506 kB] Get:22 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.10.6-1 [21.7 kB] Get:23 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.10.6-1 [38.2 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.0-3 [812 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.0-3 [2064 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 binutils-common amd64 2.39-8 [2330 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 libbinutils amd64 2.39-8 [548 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 libctf-nobfd0 amd64 2.39-8 [153 kB] Get:29 http://deb.debian.org/debian bookworm/main amd64 libctf0 amd64 2.39-8 [89.8 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 libgprofng0 amd64 2.39-8 [812 kB] Get:31 http://deb.debian.org/debian bookworm/main amd64 binutils-x86-64-linux-gnu amd64 2.39-8 [2177 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 binutils amd64 2.39-8 [64.1 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 libisl23 amd64 0.25-1 [690 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 libmpfr6 amd64 4.1.0-3 [2012 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 libmpc3 amd64 1.2.1-2 [44.6 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 cpp-12 amd64 12.2.0-9 [9769 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 cpp amd64 4:12.2.0-1 [20.0 kB] Get:38 http://deb.debian.org/debian bookworm/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-2 [164 kB] Get:39 http://deb.debian.org/debian bookworm/main amd64 libcc1-0 amd64 12.2.0-9 [41.7 kB] Get:40 http://deb.debian.org/debian bookworm/main amd64 libgomp1 amd64 12.2.0-9 [116 kB] Get:41 http://deb.debian.org/debian bookworm/main amd64 libitm1 amd64 12.2.0-9 [26.1 kB] Get:42 http://deb.debian.org/debian bookworm/main amd64 libatomic1 amd64 12.2.0-9 [9328 B] Get:43 http://deb.debian.org/debian bookworm/main amd64 libasan8 amd64 12.2.0-9 [2193 kB] Get:44 http://deb.debian.org/debian bookworm/main amd64 liblsan0 amd64 12.2.0-9 [969 kB] Get:45 http://deb.debian.org/debian bookworm/main amd64 libtsan2 amd64 12.2.0-9 [2197 kB] Get:46 http://deb.debian.org/debian bookworm/main amd64 libubsan1 amd64 12.2.0-9 [883 kB] Get:47 http://deb.debian.org/debian bookworm/main amd64 libquadmath0 amd64 12.2.0-9 [145 kB] Get:48 http://deb.debian.org/debian bookworm/main amd64 libgcc-12-dev amd64 12.2.0-9 [2436 kB] Get:49 http://deb.debian.org/debian bookworm/main amd64 gcc-12 amd64 12.2.0-9 [19.3 MB] Get:50 http://deb.debian.org/debian bookworm/main amd64 gcc amd64 4:12.2.0-1 [5192 B] Get:51 http://deb.debian.org/debian bookworm/main amd64 libc-dev-bin amd64 2.36-5 [42.9 kB] Get:52 http://deb.debian.org/debian bookworm/main amd64 linux-libc-dev amd64 6.0.8-1 [1679 kB] Get:53 http://deb.debian.org/debian bookworm/main amd64 libcrypt-dev amd64 1:4.4.33-1 [118 kB] Get:54 http://deb.debian.org/debian bookworm/main amd64 libtirpc-dev amd64 1.3.3+ds-1 [191 kB] Get:55 http://deb.debian.org/debian bookworm/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:56 http://deb.debian.org/debian bookworm/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:57 http://deb.debian.org/debian bookworm/main amd64 libc6-dev amd64 2.36-5 [1897 kB] Get:58 http://deb.debian.org/debian bookworm/main amd64 libstdc++-12-dev amd64 12.2.0-9 [2047 kB] Get:59 http://deb.debian.org/debian bookworm/main amd64 g++-12 amd64 12.2.0-9 [10.7 MB] Get:60 http://deb.debian.org/debian bookworm/main amd64 g++ amd64 4:12.2.0-1 [1636 B] Get:61 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.10.1-2 [156 kB] Get:62 http://deb.debian.org/debian bookworm/main amd64 libboost1.74-dev amd64 1.74.0-17+b2 [9511 kB] Get:63 http://deb.debian.org/debian bookworm/main amd64 libboost-dev amd64 1.74.0.3 [4548 B] Get:64 http://deb.debian.org/debian bookworm/main amd64 libexpat1-dev amd64 2.5.0-1 [150 kB] Get:65 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-9 [792 kB] Get:66 http://deb.debian.org/debian bookworm/main amd64 libjs-bootstrap all 3.4.1+dfsg-2 [173 kB] Get:67 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:68 http://deb.debian.org/debian bookworm/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-2 [116 kB] Get:69 http://deb.debian.org/debian bookworm/main amd64 libjs-sphinxdoc all 4.5.0-4 [142 kB] Get:70 http://deb.debian.org/debian bookworm/main amd64 libopenblas0-pthread amd64 0.3.21+ds-2 [6495 kB] Get:71 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.10.1-2 [2202 kB] Get:72 http://deb.debian.org/debian bookworm/main amd64 liblbfgsb0 amd64 3.0+dfsg.3-11 [28.6 kB] Get:73 http://deb.debian.org/debian bookworm/main amd64 libopenblas0 amd64 0.3.21+ds-2 [38.4 kB] Get:74 http://deb.debian.org/debian bookworm/main amd64 libopenblas-pthread-dev amd64 0.3.21+ds-2 [4851 kB] Get:75 http://deb.debian.org/debian bookworm/main amd64 libopenblas-dev amd64 0.3.21+ds-2 [50.8 kB] Get:76 http://deb.debian.org/debian bookworm/main amd64 libpython3.10 amd64 3.10.8-3 [1753 kB] Get:77 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-4.1 [193 kB] Get:78 http://deb.debian.org/debian bookworm/main amd64 libpython3.10-dev amd64 3.10.8-3 [4127 kB] Get:79 http://deb.debian.org/debian bookworm/main amd64 libpython3-dev amd64 3.10.6-1 [22.0 kB] Get:80 http://deb.debian.org/debian bookworm/main amd64 libpython3-all-dev amd64 3.10.6-1 [1068 B] Get:81 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.0-3 [1712 kB] Get:82 http://deb.debian.org/debian bookworm/main amd64 libxsimd-dev amd64 8.1.0-7 [88.8 kB] Get:83 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.10.8-1 [77.3 kB] Get:84 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.10.8-1 [139 kB] Get:85 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.10.6-1 [1060 B] Get:86 http://deb.debian.org/debian bookworm/main amd64 python3.10-dev amd64 3.10.8-3 [508 kB] Get:87 http://deb.debian.org/debian bookworm/main amd64 python3-dev amd64 3.10.6-1 [25.4 kB] Get:88 http://deb.debian.org/debian bookworm/main amd64 python3-all-dev amd64 3.10.6-1 [1068 B] Get:89 http://deb.debian.org/debian bookworm/main amd64 python3-gast all 0.5.2-2 [9364 B] Get:90 http://deb.debian.org/debian bookworm/main amd64 python3-beniget all 0.4.1-2 [9808 B] Get:91 http://deb.debian.org/debian bookworm/main amd64 python3-decorator all 5.1.1-2 [16.5 kB] Get:92 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 65.5.0-1 [278 kB] Get:93 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.0-3 [559 kB] Get:94 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.21.5-2 [3845 kB] Get:95 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB] Get:96 http://deb.debian.org/debian bookworm/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB] Get:97 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.8.1-14+b1 [17.2 MB] Get:98 http://deb.debian.org/debian bookworm/main amd64 python3-weblogo all 3.7.12-4 [112 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 132 MB in 4s (37.6 MB/s) Selecting previously unselected package libssl3:amd64. 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Setting up libblas3:amd64 (3.10.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up rpcsvc-proto (1.4.2-4) ... Setting up libmpfr6:amd64 (4.1.0-3) ... Setting up libquadmath0:amd64 (12.2.0-9) ... Setting up libmpc3:amd64 (1.2.1-2) ... Setting up libatomic1:amd64 (12.2.0-9) ... Setting up libncursesw6:amd64 (6.3+20220423-2) ... Setting up libk5crypto3:amd64 (1.20.1-1) ... Setting up libgfortran5:amd64 (12.2.0-9) ... Setting up libubsan1:amd64 (12.2.0-9) ... Setting up libcrypt-dev:amd64 (1:4.4.33-1) ... Setting up libasan8:amd64 (12.2.0-9) ... Setting up libmpdec3:amd64 (2.5.1-2) ... Setting up libkrb5-3:amd64 (1.20.1-1) ... Setting up libpython3.11-minimal:amd64 (3.11.0-3) ... Setting up libtsan2:amd64 (12.2.0-9) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libbinutils:amd64 (2.39-8) ... Setting up libisl23:amd64 (0.25-1) ... Setting up libc-dev-bin (2.36-5) ... Setting up readline-common (8.2-1.2) ... Setting up libcc1-0:amd64 (12.2.0-9) ... Setting up liblsan0:amd64 (12.2.0-9) ... Setting up libjs-bootstrap (3.4.1+dfsg-2) ... Setting up libitm1:amd64 (12.2.0-9) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-2) ... Setting up libctf0:amd64 (2.39-8) ... Setting up python3.11-minimal (3.11.0-3) ... Setting up liblapack3:amd64 (3.10.1-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up cpp-12 (12.2.0-9) ... Setting up libopenblas0-pthread:amd64 (0.3.21+ds-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up libreadline8:amd64 (8.2-1.2) ... Setting up libgprofng0:amd64 (2.39-8) ... Setting up libgcc-12-dev:amd64 (12.2.0-9) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-1) ... Setting up libjs-sphinxdoc (4.5.0-4) ... Setting up libopenblas0:amd64 (0.3.21+ds-2) ... Setting up cpp (4:12.2.0-1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.3-11) ... Setting up binutils-x86-64-linux-gnu (2.39-8) ... Setting up libopenblas-pthread-dev:amd64 (0.3.21+ds-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode Setting up libtirpc3:amd64 (1.3.3+ds-1) ... Setting up binutils (2.39-8) ... Setting up libopenblas-dev:amd64 (0.3.21+ds-2) ... Setting up libtirpc-dev:amd64 (1.3.3+ds-1) ... Setting up gcc-12 (12.2.0-9) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libpython3.11-stdlib:amd64 (3.11.0-3) ... Setting up gcc (4:12.2.0-1) ... Setting up libpython3.10-stdlib:amd64 (3.10.8-3) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.36-5) ... Setting up libpython3-stdlib:amd64 (3.10.6-1) ... Setting up python3.11 (3.11.0-3) ... Setting up libpython3.10:amd64 (3.10.8-3) ... Setting up python3.10 (3.10.8-3) ... Setting up libstdc++-12-dev:amd64 (12.2.0-9) ... Setting up python3 (3.10.6-1) ... Setting up python3-decorator (5.1.1-2) ... Setting up libexpat1-dev:amd64 (2.5.0-1) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-4.1) ... Setting up python3-lib2to3 (3.10.8-1) ... Setting up g++-12 (12.2.0-9) ... Setting up python3-pkg-resources (65.5.0-1) ... Setting up python3-distutils (3.10.8-1) ... Setting up libboost1.74-dev:amd64 (1.74.0-17+b2) ... Setting up python3-ply (3.11-5) ... Setting up python3-gast (0.5.2-2) ... Setting up python3-all (3.10.6-1) ... Setting up python3-beniget (0.4.1-2) ... Setting up libpython3.10-dev:amd64 (3.10.8-3) ... Setting up python3-numpy (1:1.21.5-2) ... Setting up python3.10-dev (3.10.8-3) ... Setting up g++ (4:12.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up libboost-dev:amd64 (1.74.0.3) ... Setting up libpython3-dev:amd64 (3.10.6-1) ... Setting up libpython3-all-dev:amd64 (3.10.6-1) ... Setting up python3-dev (3.10.6-1) ... Setting up python3-all-dev (3.10.6-1) ... Setting up python3-pythran (0.11.0+ds-7) ... Setting up python3-scipy (1.8.1-14+b1) ... Setting up python3-weblogo (3.7.12-4) ... Processing triggers for libc-bin (2.36-5) ... 0m44.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-y', 'install', 'python3-weblogo'] 0m44.8s INFO: Running scripts post_install 0m44.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_install_exceptions'] 0m44.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_install_exceptions'] 0m44.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 0m46.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 0m46.2s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpzk57dzni to sid 0m46.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m46.2s INFO: Running scripts pre_distupgrade 0m46.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m46.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m46.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_exceptions'] 0m46.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_exceptions'] 0m46.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m46.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m46.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m46.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m46.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m46.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m46.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', 'update'] 0m51.0s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [161 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9404 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6950 kB] Fetched 16.5 MB in 4s (4261 kB/s) Reading package lists... 0m51.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', 'update'] 0m51.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-yf', 'dist-upgrade'] 0m58.0s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: libpython3.11 libpython3.11-dev python3.11-dev The following packages will be upgraded: bsdutils libblas3 libblkid1 liblapack3 liblzma5 libmount1 libpython3-all-dev libpython3-dev libpython3-stdlib libsmartcols1 libuuid1 linux-libc-dev mount python3 python3-all python3-all-dev python3-dev python3-minimal python3-weblogo tar util-linux util-linux-extra zlib1g zlib1g-dev 24 upgraded, 3 newly installed, 0 to remove and 0 not upgraded. Need to get 15.7 MB of archives. After this operation, 35.7 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 bsdutils amd64 1:2.38.1-4 [94.2 kB] Get:2 http://deb.debian.org/debian sid/main amd64 tar amd64 1.34+dfsg-1.1 [836 kB] Get:3 http://deb.debian.org/debian sid/main amd64 libsmartcols1 amd64 2.38.1-4 [106 kB] Get:4 http://deb.debian.org/debian sid/main amd64 util-linux-extra amd64 2.38.1-4 [110 kB] Get:5 http://deb.debian.org/debian sid/main amd64 util-linux amd64 2.38.1-4 [1176 kB] Get:6 http://deb.debian.org/debian sid/main amd64 mount amd64 2.38.1-4 [134 kB] Get:7 http://deb.debian.org/debian sid/main amd64 python3-all-dev amd64 3.10.6-3 [1076 B] Get:8 http://deb.debian.org/debian sid/main amd64 python3-all amd64 3.10.6-3 [1064 B] Get:9 http://deb.debian.org/debian sid/main amd64 libpython3-all-dev amd64 3.10.6-3 [1072 B] Get:10 http://deb.debian.org/debian sid/main amd64 libpython3-dev amd64 3.10.6-3 [8816 B] Get:11 http://deb.debian.org/debian sid/main amd64 python3-dev amd64 3.10.6-3 [25.4 kB] Get:12 http://deb.debian.org/debian sid/main amd64 python3-minimal amd64 3.10.6-3 [25.5 kB] Get:13 http://deb.debian.org/debian sid/main amd64 python3 amd64 3.10.6-3 [25.2 kB] Get:14 http://deb.debian.org/debian sid/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB] Get:15 http://deb.debian.org/debian sid/main amd64 zlib1g amd64 1:1.2.13.dfsg-1 [86.7 kB] Get:16 http://deb.debian.org/debian sid/main amd64 libpython3.11 amd64 3.11.0-3 [1986 kB] Get:17 http://deb.debian.org/debian sid/main amd64 libpython3.11-dev amd64 3.11.0-3 [4738 kB] Get:18 http://deb.debian.org/debian sid/main amd64 python3.11-dev amd64 3.11.0-3 [615 kB] Get:19 http://deb.debian.org/debian sid/main amd64 libpython3-stdlib amd64 3.10.6-3 [8588 B] Get:20 http://deb.debian.org/debian sid/main amd64 libblkid1 amd64 2.38.1-4 [147 kB] Get:21 http://deb.debian.org/debian sid/main amd64 liblzma5 amd64 5.2.8-0.0 [186 kB] Get:22 http://deb.debian.org/debian sid/main amd64 libmount1 amd64 2.38.1-4 [165 kB] Get:23 http://deb.debian.org/debian sid/main amd64 libuuid1 amd64 2.38.1-4 [28.4 kB] Get:24 http://deb.debian.org/debian sid/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get:25 http://deb.debian.org/debian sid/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get:26 http://deb.debian.org/debian sid/main amd64 linux-libc-dev amd64 6.0.10-1 [1688 kB] Get:27 http://deb.debian.org/debian sid/main amd64 python3-weblogo all 3.7.12-5 [112 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 15.7 MB in 1s (14.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34248 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.38.1-4_amd64.deb ... Unpacking bsdutils (1:2.38.1-4) over (1:2.38.1-3) ... Setting up bsdutils (1:2.38.1-4) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34248 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.38.1-4_amd64.deb ... Unpacking libsmartcols1:amd64 (2.38.1-4) over (2.38.1-3) ... Setting up libsmartcols1:amd64 (2.38.1-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34248 files and directories currently installed.) Preparing to unpack .../util-linux-extra_2.38.1-4_amd64.deb ... Unpacking util-linux-extra (2.38.1-4) over (2.38.1-3) ... Setting up util-linux-extra (2.38.1-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34248 files and directories currently installed.) Preparing to unpack .../util-linux_2.38.1-4_amd64.deb ... Unpacking util-linux (2.38.1-4) over (2.38.1-3) ... Setting up util-linux (2.38.1-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34248 files and directories currently installed.) Preparing to unpack .../0-mount_2.38.1-4_amd64.deb ... Unpacking mount (2.38.1-4) over (2.38.1-3) ... Preparing to unpack .../1-python3-all-dev_3.10.6-3_amd64.deb ... Unpacking python3-all-dev (3.10.6-3) over (3.10.6-1) ... Preparing to unpack .../2-python3-all_3.10.6-3_amd64.deb ... Unpacking python3-all (3.10.6-3) over (3.10.6-1) ... Preparing to unpack .../3-libpython3-all-dev_3.10.6-3_amd64.deb ... Unpacking libpython3-all-dev:amd64 (3.10.6-3) over (3.10.6-1) ... Preparing to unpack .../4-libpython3-dev_3.10.6-3_amd64.deb ... Unpacking libpython3-dev:amd64 (3.10.6-3) over (3.10.6-1) ... Preparing to unpack .../5-python3-dev_3.10.6-3_amd64.deb ... Unpacking python3-dev (3.10.6-3) over (3.10.6-1) ... Preparing to unpack .../6-python3-minimal_3.10.6-3_amd64.deb ... Unpacking python3-minimal (3.10.6-3) over (3.10.6-1) ... Setting up python3-minimal (3.10.6-3) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34248 files and directories currently installed.) Preparing to unpack .../python3_3.10.6-3_amd64.deb ... Unpacking python3 (3.10.6-3) over (3.10.6-1) ... Preparing to unpack .../zlib1g-dev_1%3a1.2.13.dfsg-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.2.13.dfsg-1) over (1:1.2.11.dfsg-4.1) ... Preparing to unpack .../zlib1g_1%3a1.2.13.dfsg-1_amd64.deb ... Unpacking zlib1g:amd64 (1:1.2.13.dfsg-1) over (1:1.2.11.dfsg-4.1) ... Setting up zlib1g:amd64 (1:1.2.13.dfsg-1) ... Selecting previously unselected package libpython3.11:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34251 files and directories currently installed.) Preparing to unpack .../libpython3.11_3.11.0-3_amd64.deb ... Unpacking libpython3.11:amd64 (3.11.0-3) ... Selecting previously unselected package libpython3.11-dev:amd64. Preparing to unpack .../libpython3.11-dev_3.11.0-3_amd64.deb ... Unpacking libpython3.11-dev:amd64 (3.11.0-3) ... Selecting previously unselected package python3.11-dev. Preparing to unpack .../python3.11-dev_3.11.0-3_amd64.deb ... Unpacking python3.11-dev (3.11.0-3) ... Preparing to unpack .../libpython3-stdlib_3.10.6-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.10.6-3) over (3.10.6-1) ... Preparing to unpack .../libblkid1_2.38.1-4_amd64.deb ... Unpacking libblkid1:amd64 (2.38.1-4) over (2.38.1-3) ... Setting up libblkid1:amd64 (2.38.1-4) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34486 files and directories currently installed.) Preparing to unpack .../libuuid1_2.38.1-4_amd64.deb ... Unpacking libuuid1:amd64 (2.38.1-4) over (2.38.1-3) ... Setting up libuuid1:amd64 (2.38.1-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34486 files and directories currently installed.) Preparing to unpack .../libblas3_3.11.0-2_amd64.deb ... Unpacking libblas3:amd64 (3.11.0-2) over (3.10.1-2) ... Preparing to unpack .../liblapack3_3.11.0-2_amd64.deb ... Unpacking liblapack3:amd64 (3.11.0-2) over (3.10.1-2) ... Preparing to unpack .../linux-libc-dev_6.0.10-1_amd64.deb ... Unpacking linux-libc-dev:amd64 (6.0.10-1) over (6.0.8-1) ... Preparing to unpack .../python3-weblogo_3.7.12-5_all.deb ... Unpacking python3-weblogo (3.7.12-5) over (3.7.12-4) ... Setting up liblapack3:amd64 (3.11.0-2) ... Setting up libpython3-dev:amd64 (3.10.6-3) ... Setting up libpython3.11:amd64 (3.11.0-3) ... Setting up linux-libc-dev:amd64 (6.0.10-1) ... Setting up libblas3:amd64 (3.11.0-2) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Setting up mount (2.38.1-4) ... Setting up libpython3-stdlib:amd64 (3.10.6-3) ... Setting up python3 (3.10.6-3) ... Setting up libpython3.11-dev:amd64 (3.11.0-3) ... Setting up libpython3-all-dev:amd64 (3.10.6-3) ... Setting up python3-dev (3.10.6-3) ... Setting up python3-weblogo (3.7.12-5) ... Setting up python3.11-dev (3.11.0-3) ... Setting up python3-all (3.10.6-3) ... Setting up python3-all-dev (3.10.6-3) ... Processing triggers for libc-bin (2.36-5) ... 0m58.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-yf', 'dist-upgrade'] 0m58.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m58.3s DUMP: 57f8220abfd5f4aca07d49db9f151541 - 0m58.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m58.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'show', '--no-all-versions', 'python3-weblogo'] 0m58.5s DUMP: Package: python3-weblogo Source: python-weblogo Version: 3.7.12-5 Installed-Size: 563 Maintainer: Debian Python Team Architecture: all Depends: libjs-bootstrap, python3-numpy, python3-pkg-resources, python3-scipy, python3:any Description-en: sequence logo generator WebLogo is a web based application designed to make the generation of sequence logos. . WebLogo can create output in several common graphics formats, including the bitmap formats GIF and PNG, suitable for on-screen display, and the vector formats EPS and PDF, more suitable for printing, publication, and further editing. Additional graphics options include bitmap resolution, titles, optional axis, and axis labels, antialiasing, error bars, and alternative symbol formats. . A sequence logo is a graphical representation of an amino acid or nucleic acid multiple sequence alignment. Each logo consists of stacks of symbols, one stack for each position in the sequence. The overall height of the stack indicates the sequence conservation at that position, while the height of symbols within the stack indicates the relative frequency of each amino or nucleic acid at that position. The width of the stack is proportional to the fraction of valid symbols in that position. Description-md5: 3807a3bf703afdece90c3f38418116bc Homepage: https://github.com/WebLogo/weblogo Section: science Priority: optional Filename: pool/main/p/python-weblogo/python3-weblogo_3.7.12-5_all.deb Size: 112380 MD5sum: 4532266181d5df57dfb34d860039530f SHA256: 828e6a00784d6ed0696ae4d8537fd2a418ceb886106131ae7421dd2b0747c8f3 0m58.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'show', '--no-all-versions', 'python3-weblogo'] 0m58.5s INFO: apt-cache knows about the following packages: python3-weblogo 0m58.5s INFO: Running scripts pre_install 0m58.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_database-server'] 0m58.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_database-server'] 0m58.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_exceptions'] 0m58.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_exceptions'] 0m58.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_extras'] 0m58.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_extras'] 0m58.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture'] 0m58.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture'] 0m58.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m58.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m58.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy'] 0m58.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m58.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy'] 0m58.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy', 'python3-weblogo'] 0m58.7s DUMP: python3-weblogo: Installed: 3.7.12-5 Candidate: 3.7.12-5 Version table: *** 3.7.12-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m58.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy', 'python3-weblogo'] 0m58.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-y', 'install', 'python3-weblogo'] 0m59.2s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-weblogo is already the newest version (3.7.12-5). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m59.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-y', 'install', 'python3-weblogo'] 0m59.2s INFO: Running scripts post_install 0m59.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_install_exceptions'] 0m59.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_install_exceptions'] 0m59.2s INFO: Running scripts post_distupgrade 0m59.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m59.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m59.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_exceptions'] 0m59.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_exceptions'] 0m59.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m59.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m59.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m59.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m59.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_zz_backports'] 0m59.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_distupgrade_zz_backports'] 0m59.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m0.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m0.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m1.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m1.4s INFO: Running scripts pre_install 1m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_database-server'] 1m1.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_database-server'] 1m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_exceptions'] 1m1.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_exceptions'] 1m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_extras'] 1m1.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_extras'] 1m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture'] 1m1.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture'] 1m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m1.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m1.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy'] 1m1.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 1m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy'] 1m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy', 'python3-weblogo'] 1m1.6s DUMP: python3-weblogo: Installed: 3.7.12-5 Candidate: 3.7.12-5 Version table: *** 3.7.12-5 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 1m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-cache', 'policy', 'python3-weblogo'] 1m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-y', 'install', 'python3-weblogo=3.7.12-5'] 1m2.2s DUMP: Reading package lists... Building dependency tree... Reading state information... python3-weblogo is already the newest version (3.7.12-5). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', '-y', 'install', 'python3-weblogo=3.7.12-5'] 1m2.2s INFO: Running scripts post_install 1m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_install_exceptions'] 1m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_install_exceptions'] 1m2.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m3.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m5.5s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', '-ac', '--ignore-obsolete'] 1m9.6s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', '-ac', '--ignore-obsolete'] 1m9.6s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m9.6s DUMP: 0.15.6 1m9.6s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m9.6s INFO: Running adequate version 0.15.6 now. 1m9.6s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'python3-weblogo'] 1m9.7s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'python3-weblogo'] 1m9.7s INFO: Running scripts pre_remove 1m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m12.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m12.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m12.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m12.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_exceptions'] 1m12.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/pre_remove_exceptions'] 1m12.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m12.7s DUMP: install ok installed apt apt 2.5.4 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2-2+b1 install ok installed binutils binutils 2.39-8 install ok installed binutils-common:amd64 binutils-common 2.39-8 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.39-8 install ok installed bsdutils bsdutils 1:2.38.1-4 install ok installed coreutils coreutils 9.1-1 install ok installed cpp cpp 4:12.2.0-1 install ok installed cpp-12 cpp-12 12.2.0-9 install ok installed dash dash 0.5.11+git20210903+057cd650a4ed-9 install ok installed debconf debconf 1.5.79 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-1 install ok installed dpkg dpkg 1.21.9+b1 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1+b1 install ok installed findutils findutils 4.9.0-3 install ok installed fonts-glyphicons-halflings fonts-glyphicons-halflings 1.009~3.4.1+dfsg-2 install ok installed g++ g++ 4:12.2.0-1 install ok installed g++-12 g++-12 12.2.0-9 install ok installed gcc gcc 4:12.2.0-1 install ok installed gcc-12 gcc-12 12.2.0-9 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-9 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.4 install ok installed libasan8:amd64 libasan8 12.2.0-9 install ok installed libatomic1:amd64 libatomic1 12.2.0-9 install ok installed libattr1:amd64 libattr1 1:2.5.1-1 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libbinutils:amd64 libbinutils 2.39-8 install ok installed libblas3:amd64 libblas3 3.11.0-2 install ok installed libblkid1:amd64 libblkid1 2.38.1-4 install ok installed libboost-dev:amd64 libboost-dev 1.74.0.3 install ok installed libboost1.74-dev:amd64 libboost1.74-dev 1.74.0-17+b2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-5 install ok installed libc-dev-bin libc-dev-bin 2.36-5 install ok installed libc6:amd64 libc6 2.36-5 install ok installed libc6-dev:amd64 libc6-dev 2.36-5 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.44-1 install ok installed libcc1-0:amd64 libcc1-0 12.2.0-9 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1+b1 install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.33-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-1 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.39-8 install ok installed libctf0:amd64 libctf0 2.39-8 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.265 install ok installed libexpat1:amd64 libexpat1 2.5.0-1 install ok installed libexpat1-dev:amd64 libexpat1-dev 2.5.0-1 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1+b1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-3 install ok installed libgcc-12-dev:amd64 libgcc-12-dev 12.2.0-9 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-9 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgfortran5:amd64 libgfortran5 12.2.0-9 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgomp1:amd64 libgomp1 12.2.0-9 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libgprofng0:amd64 libgprofng0 2.39-8 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.20.1-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed libisl23:amd64 libisl23 0.25-1 install ok installed libitm1:amd64 libitm1 12.2.0-9 install ok installed libjs-bootstrap libjs-bootstrap 3.4.1+dfsg-2 install ok installed libjs-jquery libjs-jquery 3.6.1+dfsg+~3.5.14-1 install ok installed libjs-sphinxdoc libjs-sphinxdoc 4.5.0-4 install ok installed libjs-underscore libjs-underscore 1.13.4~dfsg+~1.11.4-2 install ok installed libk5crypto3:amd64 libk5crypto3 1.20.1-1 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-1 install ok installed libkrb5-3:amd64 libkrb5-3 1.20.1-1 install ok installed libkrb5support0:amd64 libkrb5support0 1.20.1-1 install ok installed liblapack3:amd64 liblapack3 3.11.0-2 install ok installed liblbfgsb0:amd64 liblbfgsb0 3.0+dfsg.3-11 install ok installed liblsan0:amd64 liblsan0 12.2.0-9 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.2.8-0.0 install ok installed libmount1:amd64 libmount1 2.38.1-4 install ok installed libmpc3:amd64 libmpc3 1.2.1-2 install ok installed libmpdec3:amd64 libmpdec3 2.5.1-2 install ok installed libmpfr6:amd64 libmpfr6 4.1.0-3 install ok installed libncursesw6:amd64 libncursesw6 6.3+20220423-2 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnsl-dev:amd64 libnsl-dev 1.3.0-2 install ok installed libnsl2:amd64 libnsl2 1.3.0-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libopenblas-dev:amd64 libopenblas-dev 0.3.21+ds-2 install ok installed libopenblas-pthread-dev:amd64 libopenblas-pthread-dev 0.3.21+ds-2 install ok installed libopenblas0:amd64 libopenblas0 0.3.21+ds-2 install ok installed libopenblas0-pthread:amd64 libopenblas0-pthread 0.3.21+ds-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-1 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-5 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-5 install ok installed libpam-runtime libpam-runtime 1.5.2-5 install ok installed libpam0g:amd64 libpam0g 1.5.2-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-2 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-4 install ok installed libpython3-all-dev:amd64 libpython3-all-dev 3.10.6-3 install ok installed libpython3-dev:amd64 libpython3-dev 3.10.6-3 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.10.6-3 install ok installed libpython3.10:amd64 libpython3.10 3.10.8-3 install ok installed libpython3.10-dev:amd64 libpython3.10-dev 3.10.8-3 install ok installed libpython3.10-minimal:amd64 libpython3.10-minimal 3.10.8-3 install ok installed libpython3.10-stdlib:amd64 libpython3.10-stdlib 3.10.8-3 install ok installed libpython3.11:amd64 libpython3.11 3.11.0-3 install ok installed libpython3.11-dev:amd64 libpython3.11-dev 3.11.0-3 install ok installed libpython3.11-minimal:amd64 libpython3.11-minimal 3.11.0-3 install ok installed libpython3.11-stdlib:amd64 libpython3.11-stdlib 3.11.0-3 install ok installed libquadmath0:amd64 libquadmath0 12.2.0-9 install ok installed libreadline8:amd64 libreadline8 8.2-1.2 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b3 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b3 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-4 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.40.0-1 install ok installed libss2:amd64 libss2 1.46.6~rc1-1+b1 install ok installed libssl3:amd64 libssl3 3.0.7-1 install ok installed libstdc++-12-dev:amd64 libstdc++-12-dev 12.2.0-9 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-9 install ok installed libsystemd0:amd64 libsystemd0 252.1-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.3+20220423-2 install ok installed libtirpc-common libtirpc-common 1.3.3+ds-1 install ok installed libtirpc-dev:amd64 libtirpc-dev 1.3.3+ds-1 install ok installed libtirpc3:amd64 libtirpc3 1.3.3+ds-1 install ok installed libtsan2:amd64 libtsan2 12.2.0-9 install ok installed libubsan1:amd64 libubsan1 12.2.0-9 install ok installed libudev1:amd64 libudev1 252.1-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-4 install ok installed libxsimd-dev:amd64 libxsimd-dev 8.1.0-7 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg-1 install ok installed linux-libc-dev:amd64 linux-libc-dev 6.0.10-1 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1+b1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed media-types media-types 8.0.0 install ok installed mount mount 2.38.1-4 install ok installed ncurses-base ncurses-base 6.3+20220423-2 install ok installed ncurses-bin ncurses-bin 6.3+20220423-2 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-4 install ok installed perl-base perl-base 5.36.0-4 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-4 install ok installed python3 python3 3.10.6-3 install ok installed python3-all python3-all 3.10.6-3 install ok installed python3-all-dev python3-all-dev 3.10.6-3 install ok installed python3-beniget python3-beniget 0.4.1-2 install ok installed python3-decorator python3-decorator 5.1.1-2 install ok installed python3-dev python3-dev 3.10.6-3 install ok installed python3-distutils python3-distutils 3.10.8-1 install ok installed python3-gast python3-gast 0.5.2-2 install ok installed python3-lib2to3 python3-lib2to3 3.10.8-1 install ok installed python3-minimal python3-minimal 3.10.6-3 install ok installed python3-numpy python3-numpy 1:1.21.5-2 install ok installed python3-pkg-resources python3-pkg-resources 65.5.0-1 install ok installed python3-ply python3-ply 3.11-5 install ok installed python3-pythran python3-pythran 0.11.0+ds-7 install ok installed python3-scipy python3-scipy 1.8.1-14+b1 install ok installed python3-weblogo python3-weblogo 3.7.12-5 install ok installed python3.10 python3.10 3.10.8-3 install ok installed python3.10-dev python3.10-dev 3.10.8-3 install ok installed python3.10-minimal python3.10-minimal 3.10.8-3 install ok installed python3.11 python3.11 3.11.0-3 install ok installed python3.11-dev python3.11-dev 3.11.0-3 install ok installed python3.11-minimal python3.11-minimal 3.11.0-3 install ok installed readline-common readline-common 8.2-1.2 install ok installed rpcsvc-proto rpcsvc-proto 1.4.2-4 install ok installed sed sed 4.8-1 install ok installed sysvinit-utils sysvinit-utils 3.05-7 install ok installed tar tar 1.34+dfsg-1.1 install ok installed tzdata tzdata 2022f-1 install ok installed usr-is-merged usr-is-merged 33 install ok installed usrmerge usrmerge 33 install ok installed util-linux util-linux 2.38.1-4 install ok installed util-linux-extra util-linux-extra 2.38.1-4 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.2.13.dfsg-1 1m12.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m12.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'fonts-glyphicons-halflings', 'g++-', 'g++-12', 'gcc', 'gcc-12', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.74-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjs-bootstrap', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblsan0:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.10:amd64', 'libpython3.10-dev:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'libsqlite3-0:amd64', 'libssl3:amd64', 'libstdc++-12-dev:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev:amd64', 'media-types', 'python3', 'python3-all', 'python3-all-dev', 'python3-beniget', 'python3-decorator', 'python3-dev', 'python3-distutils', 'python3-gast', 'python3-lib2to3', 'python3-minimal', 'python3-numpy', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3.10', 'python3.10-dev', 'python3.10-minimal', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'readline-common', 'rpcsvc-proto', 'zlib1g-dev:amd64', 'python3-weblogo'] 1m17.1s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: binutils binutils-common binutils-x86-64-linux-gnu cpp cpp-12 fonts-glyphicons-halflings g++ g++-12 gcc gcc-12 libasan8 libatomic1 libbinutils libblas3 libboost-dev libboost1.74-dev libc-dev-bin libc6-dev libcc1-0 libcrypt-dev libctf-nobfd0 libctf0 libexpat1 libexpat1-dev libgcc-12-dev libgfortran5 libgomp1 libgprofng0 libgssapi-krb5-2 libisl23 libitm1 libjs-bootstrap libjs-jquery libjs-sphinxdoc libjs-underscore libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblsan0 libmpc3 libmpdec3 libmpfr6 libncursesw6 libnsl-dev libnsl2 libopenblas-dev libopenblas-pthread-dev libopenblas0 libopenblas0-pthread libpython3-all-dev libpython3-dev libpython3-stdlib libpython3.10 libpython3.10-dev libpython3.10-minimal libpython3.10-stdlib libpython3.11 libpython3.11-dev libpython3.11-minimal libpython3.11-stdlib libquadmath0 libreadline8 libsqlite3-0 libssl3 libstdc++-12-dev libtirpc-common libtirpc-dev libtirpc3 libtsan2 libubsan1 libxsimd-dev linux-libc-dev media-types python3 python3-all python3-all-dev python3-beniget python3-decorator python3-dev python3-distutils python3-gast python3-lib2to3 python3-minimal python3-numpy python3-pkg-resources python3-ply python3-pythran python3-scipy python3-weblogo python3.10 python3.10-dev python3.10-minimal python3.11 python3.11-dev python3.11-minimal readline-common rpcsvc-proto zlib1g-dev 0 upgraded, 0 newly installed, 101 to remove and 0 not upgraded. After this operation, 762 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 34486 files and directories currently installed.) Removing python3-weblogo (3.7.12-5) ... Removing python3-scipy (1.8.1-14+b1) ... Removing python3-pythran (0.11.0+ds-7) ... Removing g++ (4:12.2.0-1) ... Removing gcc (4:12.2.0-1) ... Removing cpp (4:12.2.0-1) ... Removing libjs-bootstrap (3.4.1+dfsg-2) ... Removing fonts-glyphicons-halflings (1.009~3.4.1+dfsg-2) ... Removing g++-12 (12.2.0-9) ... Removing libboost-dev:amd64 (1.74.0.3) ... Removing libboost1.74-dev:amd64 (1.74.0-17+b2) ... Removing libstdc++-12-dev:amd64 (12.2.0-9) ... Removing python3-numpy (1:1.21.5-2) ... Removing liblbfgsb0:amd64 (3.0+dfsg.3-11) ... Removing liblapack3:amd64 (3.11.0-2) ... Removing libblas3:amd64 (3.11.0-2) ... Removing python3-all-dev (3.10.6-3) ... Removing python3.11-dev (3.11.0-3) ... Removing libpython3-all-dev:amd64 (3.10.6-3) ... Removing libpython3.11-dev:amd64 (3.11.0-3) ... Removing python3-dev (3.10.6-3) ... Removing python3.10-dev (3.10.8-3) ... Removing python3-all (3.10.6-3) ... Removing python3.11 (3.11.0-3) ... Removing python3.11-minimal (3.11.0-3) ... Removing libpython3.11:amd64 (3.11.0-3) ... Removing libopenblas-dev:amd64 (0.3.21+ds-2) ... Removing libopenblas-pthread-dev:amd64 (0.3.21+ds-2) ... Removing libopenblas0:amd64 (0.3.21+ds-2) ... Removing libopenblas0-pthread:amd64 (0.3.21+ds-2) ... Removing libgfortran5:amd64 (12.2.0-9) ... Removing libpython3.11-stdlib:amd64 (3.11.0-3) ... Removing libjs-sphinxdoc (4.5.0-4) ... Removing libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Removing libjs-underscore (1.13.4~dfsg+~1.11.4-2) ... Removing libpython3-dev:amd64 (3.10.6-3) ... Removing python3-distutils (3.10.8-1) ... Removing python3-pkg-resources (65.5.0-1) ... Removing libpython3.11-minimal:amd64 (3.11.0-3) ... Removing libxsimd-dev:amd64 (8.1.0-7) ... Removing python3-beniget (0.4.1-2) ... Removing python3-decorator (5.1.1-2) ... Removing python3-gast (0.5.2-2) ... Removing python3-lib2to3 (3.10.8-1) ... Removing python3-ply (3.11-5) ... Removing gcc-12 (12.2.0-9) ... Removing binutils (2.39-8) ... Removing binutils-x86-64-linux-gnu (2.39-8) ... Removing libgprofng0:amd64 (2.39-8) ... Removing libctf0:amd64 (2.39-8) ... Removing libbinutils:amd64 (2.39-8) ... Removing binutils-common:amd64 (2.39-8) ... Removing cpp-12 (12.2.0-9) ... Removing libgcc-12-dev:amd64 (12.2.0-9) ... Removing libasan8:amd64 (12.2.0-9) ... Removing libatomic1:amd64 (12.2.0-9) ... Removing libpython3.10-dev:amd64 (3.10.8-3) ... Removing zlib1g-dev:amd64 (1:1.2.13.dfsg-1) ... Removing libexpat1-dev:amd64 (2.5.0-1) ... Removing libc6-dev:amd64 (2.36-5) ... Removing libc-dev-bin (2.36-5) ... Removing libcc1-0:amd64 (12.2.0-9) ... Removing libcrypt-dev:amd64 (1:4.4.33-1) ... Removing libctf-nobfd0:amd64 (2.39-8) ... Removing libgomp1:amd64 (12.2.0-9) ... Removing libpython3.10:amd64 (3.10.8-3) ... Removing libisl23:amd64 (0.25-1) ... Removing libitm1:amd64 (12.2.0-9) ... Removing liblsan0:amd64 (12.2.0-9) ... Removing libmpc3:amd64 (1.2.1-2) ... Removing libmpfr6:amd64 (4.1.0-3) ... Removing libnsl-dev:amd64 (1.3.0-2) ... Removing python3 (3.10.6-3) ... Removing libpython3-stdlib:amd64 (3.10.6-3) ... Removing python3.10 (3.10.8-3) ... Removing python3-minimal (3.10.6-3) ... Removing python3.10-minimal (3.10.8-3) ... Removing libquadmath0:amd64 (12.2.0-9) ... Removing libtirpc-dev:amd64 (1.3.3+ds-1) ... Removing libtsan2:amd64 (12.2.0-9) ... Removing libubsan1:amd64 (12.2.0-9) ... Removing linux-libc-dev:amd64 (6.0.10-1) ... Removing rpcsvc-proto (1.4.2-4) ... Removing libexpat1:amd64 (2.5.0-1) ... Removing libpython3.10-stdlib:amd64 (3.10.8-3) ... find: '/usr/lib/python3': No such file or directory Removing libmpdec3:amd64 (2.5.1-2) ... Removing libncursesw6:amd64 (6.3+20220423-2) ... Removing libnsl2:amd64 (1.3.0-2) ... Removing libpython3.10-minimal:amd64 (3.10.8-3) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8:amd64 (8.2-1.2) ... Removing libsqlite3-0:amd64 (3.40.0-1) ... Removing media-types (8.0.0) ... Removing readline-common (8.2-1.2) ... Removing libtirpc3:amd64 (1.3.3+ds-1) ... Removing libgssapi-krb5-2:amd64 (1.20.1-1) ... Removing libkrb5-3:amd64 (1.20.1-1) ... Removing libk5crypto3:amd64 (1.20.1-1) ... Removing libkeyutils1:amd64 (1.6.3-1) ... Removing libkrb5support0:amd64 (1.20.1-1) ... Removing libssl3:amd64 (3.0.7-1) ... Removing libtirpc-common (1.3.3+ds-1) ... Processing triggers for libc-bin (2.36-5) ... 1m17.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'fonts-glyphicons-halflings', 'g++-', 'g++-12', 'gcc', 'gcc-12', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.74-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjs-bootstrap', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblsan0:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.10:amd64', 'libpython3.10-dev:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'libsqlite3-0:amd64', 'libssl3:amd64', 'libstdc++-12-dev:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev:amd64', 'media-types', 'python3', 'python3-all', 'python3-all-dev', 'python3-beniget', 'python3-decorator', 'python3-dev', 'python3-distutils', 'python3-gast', 'python3-lib2to3', 'python3-minimal', 'python3-numpy', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3.10', 'python3.10-dev', 'python3.10-minimal', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'readline-common', 'rpcsvc-proto', 'zlib1g-dev:amd64', 'python3-weblogo'] 1m17.1s INFO: Running scripts post_remove 1m17.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_remove_exceptions'] 1m17.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_remove_exceptions'] 1m17.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'fonts-glyphicons-halflings', 'g++', 'g++-12', 'gcc', 'gcc-12', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.74-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjs-bootstrap', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblsan0:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.10:amd64', 'libpython3.10-dev:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'libsqlite3-0:amd64', 'libssl3:amd64', 'libstdc++-12-dev:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev:amd64', 'media-types', 'python3', 'python3-all', 'python3-all-dev', 'python3-beniget', 'python3-decorator', 'python3-dev', 'python3-distutils', 'python3-gast', 'python3-lib2to3', 'python3-minimal', 'python3-numpy', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3.10', 'python3.10-dev', 'python3.10-minimal', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'readline-common', 'rpcsvc-proto', 'zlib1g-dev:amd64'] 1m17.2s DUMP: dpkg: warning: ignoring request to remove binutils which isn't installed (Reading database ... 8603 files and directories currently installed.) Purging configuration files for binutils-common:amd64 (2.39-8) ... dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove cpp which isn't installed dpkg: warning: ignoring request to remove cpp-12 which isn't installed dpkg: warning: ignoring request to remove fonts-glyphicons-halflings which isn't installed dpkg: warning: ignoring request to remove g++ which isn't installed dpkg: warning: ignoring request to remove g++-12 which isn't installed dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-12 which isn't installed dpkg: warning: ignoring request to remove libasan8 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libbinutils which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libboost-dev which isn't installed dpkg: warning: ignoring request to remove libboost1.74-dev which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed Purging configuration files for libcrypt-dev:amd64 (1:4.4.33-1) ... dpkg: warning: ignoring request to remove libctf-nobfd0 which isn't installed dpkg: warning: ignoring request to remove libctf0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libexpat1-dev which isn't installed dpkg: warning: ignoring request to remove libgcc-12-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgprofng0 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.20.1-1) ... dpkg: warning: ignoring request to remove libisl23 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjs-bootstrap which isn't installed Purging configuration files for libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... dpkg: warning: ignoring request to remove libjs-sphinxdoc which isn't installed dpkg: warning: ignoring request to remove libjs-underscore which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblbfgsb0 which isn't installed dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpdec3 which isn't installed dpkg: warning: ignoring request to remove libmpfr6 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnsl-dev which isn't installed dpkg: warning: ignoring request to remove libnsl2 which isn't installed dpkg: warning: ignoring request to remove libopenblas-dev which isn't installed dpkg: warning: ignoring request to remove libopenblas-pthread-dev which isn't installed dpkg: warning: ignoring request to remove libopenblas0 which isn't installed dpkg: warning: ignoring request to remove libopenblas0-pthread which isn't installed dpkg: warning: ignoring request to remove libpython3-all-dev which isn't installed dpkg: warning: ignoring request to remove libpython3-dev which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3.10 which isn't installed dpkg: warning: ignoring request to remove libpython3.10-dev which isn't installed Purging configuration files for libpython3.10-minimal:amd64 (3.10.8-3) ... dpkg: warning: ignoring request to remove libpython3.10-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3.11 which isn't installed dpkg: warning: ignoring request to remove libpython3.11-dev which isn't installed Purging configuration files for libpython3.11-minimal:amd64 (3.11.0-3) ... dpkg: warning: ignoring request to remove libpython3.11-stdlib which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssl3 which isn't installed dpkg: warning: ignoring request to remove libstdc++-12-dev which isn't installed Purging configuration files for libtirpc-common (1.3.3+ds-1) ... dpkg: warning: ignoring request to remove libtirpc-dev which isn't installed dpkg: warning: ignoring request to remove libtirpc3 which isn't installed dpkg: warning: ignoring request to remove libtsan2 which isn't installed dpkg: warning: ignoring request to remove libubsan1 which isn't installed dpkg: warning: ignoring request to remove libxsimd-dev which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed Purging configuration files for media-types (8.0.0) ... Purging configuration files for python3 (3.10.6-3) ... dpkg: warning: ignoring request to remove python3-all which isn't installed dpkg: warning: ignoring request to remove python3-all-dev which isn't installed dpkg: warning: ignoring request to remove python3-beniget which isn't installed dpkg: warning: ignoring request to remove python3-decorator which isn't installed dpkg: warning: ignoring request to remove python3-dev which isn't installed dpkg: warning: ignoring request to remove python3-distutils which isn't installed dpkg: warning: ignoring request to remove python3-gast which isn't installed dpkg: warning: ignoring request to remove python3-lib2to3 which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-ply which isn't installed dpkg: warning: ignoring request to remove python3-pythran which isn't installed dpkg: warning: ignoring request to remove python3-scipy which isn't installed dpkg: warning: ignoring request to remove python3.10 which isn't installed dpkg: warning: ignoring request to remove python3.10-dev which isn't installed Purging configuration files for python3.10-minimal (3.10.8-3) ... dpkg: warning: ignoring request to remove python3.11 which isn't installed dpkg: warning: ignoring request to remove python3.11-dev which isn't installed Purging configuration files for python3.11-minimal (3.11.0-3) ... Purging configuration files for readline-common (8.2-1.2) ... dpkg: warning: ignoring request to remove rpcsvc-proto which isn't installed dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed 1m17.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'cpp', 'cpp-12', 'fonts-glyphicons-halflings', 'g++', 'g++-12', 'gcc', 'gcc-12', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.74-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libexpat1:amd64', 'libexpat1-dev:amd64', 'libgcc-12-dev:amd64', 'libgfortran5:amd64', 'libgomp1:amd64', 'libgprofng0:amd64', 'libgssapi-krb5-2:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjs-bootstrap', 'libjs-jquery', 'libjs-sphinxdoc', 'libjs-underscore', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblsan0:amd64', 'libmpc3:amd64', 'libmpdec3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnsl-dev:amd64', 'libnsl2:amd64', 'libopenblas-dev:amd64', 'libopenblas-pthread-dev:amd64', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libpython3-all-dev:amd64', 'libpython3-dev:amd64', 'libpython3-stdlib:amd64', 'libpython3.10:amd64', 'libpython3.10-dev:amd64', 'libpython3.10-minimal:amd64', 'libpython3.10-stdlib:amd64', 'libpython3.11:amd64', 'libpython3.11-dev:amd64', 'libpython3.11-minimal:amd64', 'libpython3.11-stdlib:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'libsqlite3-0:amd64', 'libssl3:amd64', 'libstdc++-12-dev:amd64', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libxsimd-dev:amd64', 'linux-libc-dev:amd64', 'media-types', 'python3', 'python3-all', 'python3-all-dev', 'python3-beniget', 'python3-decorator', 'python3-dev', 'python3-distutils', 'python3-gast', 'python3-lib2to3', 'python3-minimal', 'python3-numpy', 'python3-pkg-resources', 'python3-ply', 'python3-pythran', 'python3-scipy', 'python3.10', 'python3.10-dev', 'python3.10-minimal', 'python3.11', 'python3.11-dev', 'python3.11-minimal', 'readline-common', 'rpcsvc-proto', 'zlib1g-dev:amd64'] 1m17.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg', '--purge', 'python3-weblogo'] 1m17.2s DUMP: dpkg: warning: ignoring request to remove python3-weblogo which isn't installed 1m17.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg', '--purge', 'python3-weblogo'] 1m17.2s INFO: Running scripts post_purge 1m17.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_purge_exceptions'] 1m17.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_purge_exceptions'] 1m17.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg', '--purge', '--pending'] 1m17.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg', '--purge', '--pending'] 1m17.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg', '--remove', '--pending'] 1m17.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg', '--remove', '--pending'] 1m17.2s INFO: Running scripts post_test 1m17.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_test_exceptions'] 1m17.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'tmp/scripts/post_test_exceptions'] 1m17.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m17.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg-divert', '--list'] 1m17.5s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'dpkg-divert', '--list'] 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', 'clean'] 1m17.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpzk57dzni', 'apt-get', 'clean'] 1m17.6s DEBUG: Recording chroot state 1m18.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/shm'] 1m18.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/shm'] 1m18.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/console'] 1m18.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/console'] 1m18.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/ptmx'] 1m18.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/ptmx'] 1m18.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/pts'] 1m18.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/dev/pts'] 1m18.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/proc'] 1m18.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpzk57dzni/proc'] 1m18.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m18.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpzk57dzni'] 1m18.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpzk57dzni 1m18.9s INFO: PASS: Upgrading between Debian distributions. 1m18.9s INFO: PASS: All tests. 1m18.9s INFO: piuparts run ends. ret=0 End: 2022-11-27 21:16:52 GMT