Start: 2023-01-22 04:00:22 GMT [testing] Package: r-cran-publish Version: 2020.12.23-2 Installed-Size: 579 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 4.1.2-1), r-api-4.0, r-cran-prodlim (>= 1.5.4), r-cran-survival (>= 2.38), r-cran-data.table (>= 1.10.4), r-cran-lava (>= 1.5.1), r-cran-multcomp (>= 1.4) Recommends: r-cran-testthat, r-cran-mitools (>= 2.4), r-cran-smcfcs (>= 1.4.1), r-cran-riskregression Suggests: r-cran-rms (>= 6.1.0), r-cran-nlme (>= 3.1-131) Description: GNU R format output of various routines Homepage: https://cran.r-project.org/package=Publish Description-md5: 87e6744d4b3c2016c2653da0976c2f80 Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-publish/r-cran-publish_2020.12.23-2_all.deb Size: 465956 MD5sum: d2e2eebd681be401bbefcfece94e5ee1 SHA256: 675499b7b8e407b31d010ef942a79183383cb841e61159cc98ba850229ee013f [sid] Package: r-cran-publish Version: 2023.01.17-1 Installed-Size: 588 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 4.2.2.20221110-2), r-api-4.0, r-cran-prodlim (>= 1.5.4), r-cran-survival (>= 2.38), r-cran-data.table (>= 1.10.4), r-cran-lava (>= 1.5.1), r-cran-multcomp (>= 1.4) Recommends: r-cran-testthat, r-cran-mitools (>= 2.4), r-cran-smcfcs (>= 1.4.1), r-cran-riskregression Suggests: r-cran-rms (>= 6.1.0), r-cran-nlme (>= 3.1-131) Description: GNU R format output of various routines Homepage: https://cran.r-project.org/package=Publish Description-md5: 87e6744d4b3c2016c2653da0976c2f80 Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-publish/r-cran-publish_2023.01.17-1_all.deb Size: 466132 MD5sum: 0d3575f11b4285e5e0899061c6f949b7 SHA256: e32454252e5b5890fad845cb331c8e16285525ae1fc1907cbca6337c6d09b9d0 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt r-cran-publish=2023.01.17-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt r-cran-publish=2023.01.17-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-20-amd64 #1 SMP Debian 5.10.158-2 (2022-12-13) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpgge2f6rl 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpgge2f6rl 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m2.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bookworm_amd64.tar.gz'] 0m2.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/proc'] 0m2.6s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/proc'] 0m2.6s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/pts'] 0m2.6s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/pts'] 0m2.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/ptmx'] 0m2.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/ptmx'] 0m2.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/console'] 0m2.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/console'] 0m2.6s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/shm'] 0m2.6s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/shm'] 0m2.6s DEBUG: sources.list: deb http://deb.debian.org/debian/ bookworm main 0m2.6s DEBUG: Created policy-rc.d and chmodded it. 0m2.6s DEBUG: Created resolv.conf. 0m2.6s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpgge2f6rl/tmp/scripts/ 0m2.6s INFO: Running scripts post_chroot_unpack 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', 'update'] 0m5.5s DUMP: Get:1 http://deb.debian.org/debian bookworm InRelease [371 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 Packages [8904 kB] Get:3 http://deb.debian.org/debian bookworm/main Translation-en [6010 kB] Fetched 15.3 MB in 2s (6849 kB/s) Reading package lists... 0m5.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', 'update'] 0m5.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-yf', 'dist-upgrade'] 0m7.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: gcc-12-base libgcc-s1 liblzma5 libstdc++6 tzdata 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 1184 kB of archives. After this operation, 3072 B of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 gcc-12-base amd64 12.2.0-14 [37.5 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 libstdc++6 amd64 12.2.0-14 [614 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libgcc-s1 amd64 12.2.0-14 [49.9 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 liblzma5 amd64 5.4.1-0.0 [205 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 tzdata all 2022g-2 [277 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 1184 kB in 0s (11.4 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8044 files and directories currently installed.) Preparing to unpack .../gcc-12-base_12.2.0-14_amd64.deb ... Unpacking gcc-12-base:amd64 (12.2.0-14) over (12.2.0-13) ... Setting up gcc-12-base:amd64 (12.2.0-14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8044 files and directories currently installed.) Preparing to unpack .../libstdc++6_12.2.0-14_amd64.deb ... Unpacking libstdc++6:amd64 (12.2.0-14) over (12.2.0-13) ... Setting up libstdc++6:amd64 (12.2.0-14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8044 files and directories currently installed.) Preparing to unpack .../libgcc-s1_12.2.0-14_amd64.deb ... Unpacking libgcc-s1:amd64 (12.2.0-14) over (12.2.0-13) ... Setting up libgcc-s1:amd64 (12.2.0-14) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8044 files and directories currently installed.) Preparing to unpack .../liblzma5_5.4.1-0.0_amd64.deb ... Unpacking liblzma5:amd64 (5.4.1-0.0) over (5.4.0-0.1) ... Setting up liblzma5:amd64 (5.4.1-0.0) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8044 files and directories currently installed.) Preparing to unpack .../tzdata_2022g-2_all.deb ... Unpacking tzdata (2022g-2) over (2022g-1) ... Setting up tzdata (2022g-2) ... Current default time zone: 'Etc/UTC' Local time is now: Sun Jan 22 04:00:30 UTC 2023. Universal Time is now: Sun Jan 22 04:00:30 UTC 2023. Run 'dpkg-reconfigure tzdata' if you wish to change it. Processing triggers for libc-bin (2.36-8) ... 0m7.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-yf', 'dist-upgrade'] 0m7.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m8.1s DUMP: 429967747505390a916036cf405f3217 - 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m8.1s INFO: Running scripts post_setup 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_dummy_users'] 0m9.3s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_dummy_users'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_forbid_home'] 0m9.4s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_forbid_home'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.4s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_minimize'] 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_minimize'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_squeeze-backports'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_zz_backports'] 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_setup_zz_backports'] 0m9.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.4s DUMP: install ok installed apt apt 2.5.4 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2 install ok installed bsdutils bsdutils 1:2.38.1-4 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-2 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-3 install ok installed dpkg dpkg 1.21.18 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1.1 install ok installed findutils findutils 4.9.0-4 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-2 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.4 install ok installed libattr1:amd64 libattr1 1:2.5.1-3 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libblkid1:amd64 libblkid1 2.38.1-4 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-8 install ok installed libc6:amd64 libc6 2.36-8 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.66-3 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1.1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.10 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.266 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1.1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-3 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.0 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-4 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6 install ok installed libpam-runtime libpam-runtime 1.5.2-6 install ok installed libpam0g:amd64 libpam0g 1.5.2-6 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.40-3 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-7 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b4 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b4 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-4 install ok installed libss2:amd64 libss2 1.46.6~rc1-1.1 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14 install ok installed libsystemd0:amd64 libsystemd0 252.4-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libtinfo6:amd64 libtinfo6 6.4-1 install ok installed libudev1:amd64 libudev1 252.4-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-4 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg2-3 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1.1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-4 install ok installed ncurses-base ncurses-base 6.4-1 install ok installed ncurses-bin ncurses-bin 6.4-1 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-7 install ok installed perl-base perl-base 5.36.0-7 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-7 install ok installed sed sed 4.9-1 install ok installed sysvinit-utils sysvinit-utils 3.06-2 install ok installed tar tar 1.34+dfsg-1 install ok installed tzdata tzdata 2022g-2 install ok installed usr-is-merged usr-is-merged 35 install ok installed usrmerge usrmerge 35 install ok installed util-linux util-linux 2.38.1-4 install ok installed util-linux-extra util-linux-extra 2.38.1-4 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m9.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m9.4s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m9.4s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m9.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m9.8s INFO: Running scripts is_testable 0m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/is_testable_uninstallable'] 0m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/is_testable_uninstallable'] 0m9.8s INFO: Running scripts pre_test 0m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_test_exceptions'] 0m9.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_test_exceptions'] 0m9.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_test_root_password'] 0m9.9s DUMP: New password: Retype new password: passwd: password updated successfully 0m9.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_test_root_password'] 0m9.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'show', '--no-all-versions', 'r-cran-publish'] 0m10.1s DUMP: Package: r-cran-publish Version: 2020.12.23-2 Installed-Size: 579 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 4.1.2-1), r-api-4.0, r-cran-prodlim (>= 1.5.4), r-cran-survival (>= 2.38), r-cran-data.table (>= 1.10.4), r-cran-lava (>= 1.5.1), r-cran-multcomp (>= 1.4) Recommends: r-cran-testthat, r-cran-mitools (>= 2.4), r-cran-smcfcs (>= 1.4.1), r-cran-riskregression Suggests: r-cran-rms (>= 6.1.0), r-cran-nlme (>= 3.1-131) Description-en: GNU R format output of various routines This package enabled formatting output of various routines in a suitable way for reports and Publication A bunch of convenience functions that transform the results of some basic statistical analyses into table format nearly ready for publication. This includes descriptive tables, tables of logistic regression and Cox regression results as well as forest plots. Description-md5: 87e6744d4b3c2016c2653da0976c2f80 Homepage: https://cran.r-project.org/package=Publish Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-publish/r-cran-publish_2020.12.23-2_all.deb Size: 465956 MD5sum: d2e2eebd681be401bbefcfece94e5ee1 SHA256: 675499b7b8e407b31d010ef942a79183383cb841e61159cc98ba850229ee013f 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'show', '--no-all-versions', 'r-cran-publish'] 0m10.1s INFO: apt-cache knows about the following packages: r-cran-publish 0m10.1s INFO: Running scripts pre_install 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_database-server'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_database-server'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_exceptions'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_exceptions'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_extras'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_extras'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture'] 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy'] 0m10.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bookworm/main amd64 Packages release o=Debian,a=testing,n=bookworm,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy', 'r-cran-publish'] 0m10.3s DUMP: r-cran-publish: Installed: (none) Candidate: 2020.12.23-2 Version table: 2020.12.23-2 500 500 http://deb.debian.org/debian bookworm/main amd64 Packages 0m10.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy', 'r-cran-publish'] 0m10.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-y', 'install', 'r-cran-publish'] 0m33.4s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates fontconfig fontconfig-config fonts-dejavu-core libblas3 libbrotli1 libbsd0 libcairo2 libcurl4 libdatrie1 libdeflate0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu72 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 liblerc4 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libssh2-1 libssl3 libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3 libtk8.6 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1 libxss1 libxt6 littler openssl r-base-core r-cran-codetools r-cran-data.table r-cran-digest r-cran-future r-cran-future.apply r-cran-globals r-cran-kernsmooth r-cran-lattice r-cran-lava r-cran-listenv r-cran-littler r-cran-mass r-cran-matrix r-cran-multcomp r-cran-mvtnorm r-cran-numderiv r-cran-parallelly r-cran-pkgkitten r-cran-prodlim r-cran-progressr r-cran-rcpp r-cran-sandwich r-cran-squarem r-cran-survival r-cran-th.data r-cran-zoo readline-common sensible-utils ucf unzip x11-common xdg-utils zip Suggested packages: low-memory-monitor krb5-doc krb5-user tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-bit64 r-cran-bit r-cran-curl r-cran-r.utils r-cran-xts r-cran-nanotime r-cran-yaml r-cran-knitr r-cran-rmarkdown r-cran-r.rsp r-cran-markdown r-bioc-graph r-cran-getopt r-cran-cli r-cran-crayon r-cran-pbmcapply r-cran-progress r-cran-purrr r-cran-foreach r-cran-plyr r-cran-furrr r-cran-rstudioapi r-cran-shiny r-cran-commonmark r-cran-base64enc r-cran-rms r-cran-nlme r-cran-inline readline-doc Recommended packages: libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libldap-common publicsuffix libsasl2-modules r-recommended r-base-dev r-doc-html r-cran-ellipse r-cran-fields r-cran-geepack r-cran-knitr r-cran-bookdown r-cran-rmarkdown r-cran-igraph r-cran-lavasearch2 r-cran-lme4 r-cran-mets r-cran-nlme r-cran-optimx r-cran-polycor r-cran-quantreg r-cran-rgl r-cran-r.rsp r-cran-testthat r-cran-mitools r-cran-smcfcs r-cran-riskregression r-cran-setrng libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: ca-certificates fontconfig fontconfig-config fonts-dejavu-core libblas3 libbrotli1 libbsd0 libcairo2 libcurl4 libdatrie1 libdeflate0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu72 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 liblerc4 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libssh2-1 libssl3 libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3 libtk8.6 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1 libxss1 libxt6 littler openssl r-base-core r-cran-codetools r-cran-data.table r-cran-digest r-cran-future r-cran-future.apply r-cran-globals r-cran-kernsmooth r-cran-lattice r-cran-lava r-cran-listenv r-cran-littler r-cran-mass r-cran-matrix r-cran-multcomp r-cran-mvtnorm r-cran-numderiv r-cran-parallelly r-cran-pkgkitten r-cran-prodlim r-cran-progressr r-cran-publish r-cran-rcpp r-cran-sandwich r-cran-squarem r-cran-survival r-cran-th.data r-cran-zoo readline-common sensible-utils ucf unzip x11-common xdg-utils zip 0 upgraded, 106 newly installed, 0 to remove and 0 not upgraded. Need to get 92.1 MB of archives. After this operation, 193 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:2 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get:3 http://deb.debian.org/debian bookworm/main amd64 libssl3 amd64 3.0.7-1 [2008 kB] Get:4 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.7-1 [1400 kB] Get:5 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20211016 [156 kB] Get:6 http://deb.debian.org/debian bookworm/main amd64 ucf all 3.0043 [74.0 kB] Get:7 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB] Get:8 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b5 [279 kB] Get:9 http://deb.debian.org/debian bookworm/main amd64 libpng16-16 amd64 1.6.39-2 [276 kB] Get:10 http://deb.debian.org/debian bookworm/main amd64 libfreetype6 amd64 2.12.1+dfsg-4 [399 kB] Get:11 http://deb.debian.org/debian bookworm/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:12 http://deb.debian.org/debian bookworm/main amd64 fontconfig-config amd64 2.14.1-3 [315 kB] Get:13 http://deb.debian.org/debian bookworm/main amd64 libfontconfig1 amd64 2.14.1-3 [386 kB] Get:14 http://deb.debian.org/debian bookworm/main amd64 fontconfig amd64 2.14.1-3 [449 kB] Get:15 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB] Get:16 http://deb.debian.org/debian bookworm/main amd64 libbsd0 amd64 0.11.7-1 [117 kB] Get:17 http://deb.debian.org/debian bookworm/main amd64 libpixman-1-0 amd64 0.42.2-1 [546 kB] Get:18 http://deb.debian.org/debian bookworm/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:19 http://deb.debian.org/debian bookworm/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:20 http://deb.debian.org/debian bookworm/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:21 http://deb.debian.org/debian bookworm/main amd64 libx11-data all 2:1.8.3-3 [292 kB] Get:22 http://deb.debian.org/debian bookworm/main amd64 libx11-6 amd64 2:1.8.3-3 [759 kB] Get:23 http://deb.debian.org/debian bookworm/main amd64 libxcb-render0 amd64 1.15-1 [115 kB] Get:24 http://deb.debian.org/debian bookworm/main amd64 libxcb-shm0 amd64 1.15-1 [105 kB] Get:25 http://deb.debian.org/debian bookworm/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:26 http://deb.debian.org/debian bookworm/main amd64 libxrender1 amd64 1:0.9.10-1.1 [33.2 kB] Get:27 http://deb.debian.org/debian bookworm/main amd64 libcairo2 amd64 1.16.0-7 [575 kB] Get:28 http://deb.debian.org/debian bookworm/main amd64 libkrb5support0 amd64 1.20.1-1 [32.2 kB] Get:29 http://deb.debian.org/debian bookworm/main amd64 libk5crypto3 amd64 1.20.1-1 [78.6 kB] Get:30 http://deb.debian.org/debian bookworm/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:31 http://deb.debian.org/debian bookworm/main amd64 libkrb5-3 amd64 1.20.1-1 [331 kB] Get:32 http://deb.debian.org/debian bookworm/main amd64 libgssapi-krb5-2 amd64 1.20.1-1 [134 kB] Get:33 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB] Get:34 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB] Get:35 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-3 [183 kB] Get:36 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.51.0-1 [71.5 kB] Get:37 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:38 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:39 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB] Get:40 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.87.0-2 [376 kB] Get:41 http://deb.debian.org/debian bookworm/main amd64 libdatrie1 amd64 0.2.13-2+b1 [43.3 kB] Get:42 http://deb.debian.org/debian bookworm/main amd64 libdeflate0 amd64 1.14-1 [61.4 kB] Get:43 http://deb.debian.org/debian bookworm/main amd64 libfribidi0 amd64 1.0.8-2.1 [65.0 kB] Get:44 http://deb.debian.org/debian bookworm/main amd64 libquadmath0 amd64 12.2.0-14 [144 kB] Get:45 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB] Get:46 http://deb.debian.org/debian bookworm/main amd64 libglib2.0-0 amd64 2.74.4-1 [1396 kB] Get:47 http://deb.debian.org/debian bookworm/main amd64 libgomp1 amd64 12.2.0-14 [116 kB] Get:48 http://deb.debian.org/debian bookworm/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:49 http://deb.debian.org/debian bookworm/main amd64 libharfbuzz0b amd64 6.0.0-1 [1938 kB] Get:50 http://deb.debian.org/debian bookworm/main amd64 x11-common all 1:7.7+23 [252 kB] Get:51 http://deb.debian.org/debian bookworm/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get:52 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:53 http://deb.debian.org/debian bookworm/main amd64 libjbig0 amd64 2.1-6.1 [31.7 kB] Get:54 http://deb.debian.org/debian bookworm/main amd64 libjpeg62-turbo amd64 1:2.1.2-1+b1 [169 kB] Get:55 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB] Get:56 http://deb.debian.org/debian bookworm/main amd64 liblerc4 amd64 4.0.0+ds-2 [170 kB] Get:57 http://deb.debian.org/debian bookworm/main amd64 libthai-data all 0.1.29-1 [176 kB] Get:58 http://deb.debian.org/debian bookworm/main amd64 libthai0 amd64 0.1.29-1 [57.5 kB] Get:59 http://deb.debian.org/debian bookworm/main amd64 libpango-1.0-0 amd64 1.50.12+ds-1 [212 kB] Get:60 http://deb.debian.org/debian bookworm/main amd64 libpangoft2-1.0-0 amd64 1.50.12+ds-1 [47.4 kB] Get:61 http://deb.debian.org/debian bookworm/main amd64 libpangocairo-1.0-0 amd64 1.50.12+ds-1 [34.2 kB] Get:62 http://deb.debian.org/debian bookworm/main amd64 libpaper1 amd64 1.1.28+b1 [21.6 kB] Get:63 http://deb.debian.org/debian bookworm/main amd64 libpaper-utils amd64 1.1.28+b1 [18.3 kB] Get:64 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:65 http://deb.debian.org/debian bookworm/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:66 http://deb.debian.org/debian bookworm/main amd64 libtcl8.6 amd64 8.6.13+dfsg-1 [1035 kB] Get:67 http://deb.debian.org/debian bookworm/main amd64 libwebp7 amd64 1.2.2-2+b3 [279 kB] Get:68 http://deb.debian.org/debian bookworm/main amd64 libtiff6 amd64 4.5.0-3 [315 kB] Get:69 http://deb.debian.org/debian bookworm/main amd64 libtirpc-common all 1.3.3+ds-1 [14.0 kB] Get:70 http://deb.debian.org/debian bookworm/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB] Get:71 http://deb.debian.org/debian bookworm/main amd64 libxft2 amd64 2.3.6-1 [61.8 kB] Get:72 http://deb.debian.org/debian bookworm/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get:73 http://deb.debian.org/debian bookworm/main amd64 libtk8.6 amd64 8.6.13-1 [780 kB] Get:74 http://deb.debian.org/debian bookworm/main amd64 libxt6 amd64 1:1.2.1-1 [189 kB] Get:75 http://deb.debian.org/debian bookworm/main amd64 zip amd64 3.0-12 [232 kB] Get:76 http://deb.debian.org/debian bookworm/main amd64 unzip amd64 6.0-27 [172 kB] Get:77 http://deb.debian.org/debian bookworm/main amd64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get:78 http://deb.debian.org/debian bookworm/main amd64 r-base-core amd64 4.2.2.20221110-1+b1 [26.0 MB] Get:79 http://deb.debian.org/debian bookworm/main amd64 r-cran-littler amd64 0.3.17-1 [96.3 kB] Get:80 http://deb.debian.org/debian bookworm/main amd64 littler all 0.3.17-1 [14.4 kB] Get:81 http://deb.debian.org/debian bookworm/main amd64 r-cran-codetools all 0.2-18-1 [91.8 kB] Get:82 http://deb.debian.org/debian bookworm/main amd64 r-cran-data.table amd64 1.14.6+dfsg-1 [1711 kB] Get:83 http://deb.debian.org/debian bookworm/main amd64 r-cran-digest amd64 0.6.31-1 [184 kB] Get:84 http://deb.debian.org/debian bookworm/main amd64 r-cran-globals all 0.16.2-1 [118 kB] Get:85 http://deb.debian.org/debian bookworm/main amd64 r-cran-listenv all 0.9.0+dfsg-1 [112 kB] Get:86 http://deb.debian.org/debian bookworm/main amd64 r-cran-parallelly all 1.34.0-1 [337 kB] Get:87 http://deb.debian.org/debian bookworm/main amd64 r-cran-future all 1.30.0+dfsg-1 [634 kB] Get:88 http://deb.debian.org/debian bookworm/main amd64 r-cran-future.apply all 1.10.0+dfsg-1 [165 kB] Get:89 http://deb.debian.org/debian bookworm/main amd64 r-cran-mass amd64 7.3-58.1-1 [1122 kB] Get:90 http://deb.debian.org/debian bookworm/main amd64 r-cran-kernsmooth amd64 2.23-20-1 [91.5 kB] Get:91 http://deb.debian.org/debian bookworm/main amd64 r-cran-lattice amd64 0.20-45-3 [1177 kB] Get:92 http://deb.debian.org/debian bookworm/main amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] Get:93 http://deb.debian.org/debian bookworm/main amd64 r-cran-progressr all 0.13.0-1 [336 kB] Get:94 http://deb.debian.org/debian bookworm/main amd64 r-cran-matrix amd64 1.5-3-1 [3822 kB] Get:95 http://deb.debian.org/debian bookworm/main amd64 r-cran-survival amd64 3.5-0-1 [5915 kB] Get:96 http://deb.debian.org/debian bookworm/main amd64 r-cran-squarem all 2021.1-1 [179 kB] Get:97 http://deb.debian.org/debian bookworm/main amd64 r-cran-lava all 1.7.1+dfsg-1 [2202 kB] Get:98 http://deb.debian.org/debian bookworm/main amd64 r-cran-mvtnorm amd64 1.1-3-1+b1 [222 kB] Get:99 http://deb.debian.org/debian bookworm/main amd64 r-cran-th.data all 1.1-1-1 [8783 kB] Get:100 http://deb.debian.org/debian bookworm/main amd64 r-cran-zoo amd64 1.8-11-1 [988 kB] Get:101 http://deb.debian.org/debian bookworm/main amd64 r-cran-sandwich all 3.0-2-1 [1438 kB] Get:102 http://deb.debian.org/debian bookworm/main amd64 r-cran-multcomp all 1.4-20-1 [712 kB] Get:103 http://deb.debian.org/debian bookworm/main amd64 r-cran-pkgkitten all 0.2.2-2 [27.0 kB] Get:104 http://deb.debian.org/debian bookworm/main amd64 r-cran-rcpp amd64 1.0.9-1 [2078 kB] Get:105 http://deb.debian.org/debian bookworm/main amd64 r-cran-prodlim amd64 2019.11.13-1+b1 [395 kB] Get:106 http://deb.debian.org/debian bookworm/main amd64 r-cran-publish all 2020.12.23-2 [466 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 92.1 MB in 2s (43.3 MB/s) Selecting previously unselected package readline-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8045 files and directories currently installed.) Preparing to unpack .../000-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libssl3:amd64. Preparing to unpack .../002-libssl3_3.0.7-1_amd64.deb ... 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Preparing to unpack .../104-r-cran-prodlim_2019.11.13-1+b1_amd64.deb ... Unpacking r-cran-prodlim (2019.11.13-1+b1) ... Selecting previously unselected package r-cran-publish. Preparing to unpack .../105-r-cran-publish_2020.12.23-2_all.deb ... Unpacking r-cran-publish (2020.12.23-2) ... Setting up libexpat1:amd64 (2.5.0-1) ... Setting up libgraphite2-3:amd64 (1.3.14-1) ... Setting up libpixman-1-0:amd64 (0.42.2-1) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libkeyutils1:amd64 (1.6.3-2) ... Setting up libpsl5:amd64 (0.21.0-1.2) ... Setting up libicu72:amd64 (72.1-3) ... Setting up liblerc4:amd64 (4.0.0+ds-2) ... Setting up libdatrie1:amd64 (0.2.13-2+b1) ... Setting up libglib2.0-0:amd64 (2.74.4-1) ... No schema files found: doing nothing. Setting up libtirpc-common (1.3.3+ds-1) ... Setting up unzip (6.0-27) ... Setting up libbrotli1:amd64 (1.0.9-2+b5) ... Setting up libssl3:amd64 (3.0.7-1) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of restart. Setting up libnghttp2-14:amd64 (1.51.0-1) ... Setting up libdeflate0:amd64 (1.14-1) ... Setting up libgomp1:amd64 (12.2.0-14) ... Setting up libjbig0:amd64 (2.1-6.1) ... Setting up libkrb5support0:amd64 (1.20.1-1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Setting up zip (3.0-12) ... Setting up libblas3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:2.1.2-1+b1) ... Setting up libx11-data (2:1.8.3-3) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libfribidi0:amd64 (1.0.8-2.1) ... Setting up libquadmath0:amd64 (12.2.0-14) ... Setting up libpng16-16:amd64 (1.6.39-2) ... Setting up libtcl8.6:amd64 (8.6.13+dfsg-1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libk5crypto3:amd64 (1.20.1-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg-10) ... Setting up libgfortran5:amd64 (12.2.0-14) ... Setting up libwebp7:amd64 (1.2.2-2+b3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libtiff6:amd64 (4.5.0-3) ... Setting up libthai-data (0.1.29-1) ... Setting up libssh2-1:amd64 (1.10.0-3+b1) ... Setting up libkrb5-3:amd64 (1.20.1-1) ... Setting up openssl (3.0.7-1) ... Setting up libbsd0:amd64 (0.11.7-1) ... Setting up readline-common (8.2-1.3) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libice6:amd64 (2:1.0.10-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.11.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.15-1) ... Setting up libxcb-render0:amd64 (1.15-1) ... Setting up fontconfig-config (2.14.1-3) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libxcb-shm0:amd64 (1.15-1) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-3) ... Setting up libthai0:amd64 (0.1.29-1) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libfreetype6:amd64 (2.12.1+dfsg-4) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-1) ... Setting up ucf (3.0043) ... Setting up libcurl4:amd64 (7.87.0-2) ... Setting up libx11-6:amd64 (2:1.8.3-3) ... Setting up libharfbuzz0b:amd64 (6.0.0-1) ... Setting up libfontconfig1:amd64 (2.14.1-3) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libtirpc3:amd64 (1.3.3+ds-1) ... Setting up libpaper1:amd64 (1.1.28+b1) ... Creating config file /etc/papersize with new version Setting up fontconfig (2.14.1-3) ... Regenerating fonts cache... done. Setting up libxrender1:amd64 (1:0.9.10-1.1) ... Setting up libpango-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libpaper-utils (1.1.28+b1) ... Setting up libcairo2:amd64 (1.16.0-7) ... Setting up libxt6:amd64 (1:1.2.1-1) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libpangoft2-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libpangocairo-1.0-0:amd64 (1.50.12+ds-1) ... Setting up libxft2:amd64 (2.3.6-1) ... Setting up libtk8.6:amd64 (8.6.13-1) ... Setting up r-base-core (4.2.2.20221110-1+b1) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-squarem (2021.1-1) ... Setting up r-cran-lattice (0.20-45-3) ... Setting up r-cran-pkgkitten (0.2.2-2) ... Setting up r-cran-numderiv (2016.8-1.1-3) ... Setting up r-cran-littler (0.3.17-1) ... Setting up r-cran-rcpp (1.0.9-1) ... Setting up r-cran-codetools (0.2-18-1) ... Setting up r-cran-listenv (0.9.0+dfsg-1) ... Setting up littler (0.3.17-1) ... Setting up r-cran-digest (0.6.31-1) ... Setting up r-cran-mass (7.3-58.1-1) ... Setting up r-cran-data.table (1.14.6+dfsg-1) ... Setting up r-cran-progressr (0.13.0-1) ... Setting up r-cran-parallelly (1.34.0-1) ... Setting up r-cran-mvtnorm (1.1-3-1+b1) ... Setting up r-cran-zoo (1.8-11-1) ... Setting up r-cran-matrix (1.5-3-1) ... Setting up r-cran-kernsmooth (2.23-20-1) ... Setting up r-cran-globals (0.16.2-1) ... Setting up r-cran-sandwich (3.0-2-1) ... Setting up r-cran-survival (3.5-0-1) ... Setting up r-cran-future (1.30.0+dfsg-1) ... Setting up r-cran-future.apply (1.10.0+dfsg-1) ... Setting up r-cran-th.data (1.1-1-1) ... Setting up r-cran-lava (1.7.1+dfsg-1) ... Setting up r-cran-multcomp (1.4-20-1) ... Setting up r-cran-prodlim (2019.11.13-1+b1) ... Setting up r-cran-publish (2020.12.23-2) ... Processing triggers for libc-bin (2.36-8) ... Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m33.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-y', 'install', 'r-cran-publish'] 0m33.4s INFO: Running scripts post_install 0m33.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_install_exceptions'] 0m33.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_install_exceptions'] 0m33.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m34.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m34.1s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpgge2f6rl to sid 0m34.1s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m34.1s INFO: Running scripts pre_distupgrade 0m34.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m34.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m34.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_exceptions'] 0m34.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_exceptions'] 0m34.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m34.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m34.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', 'update'] 0m38.6s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [167 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [9397 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6957 kB] Fetched 16.5 MB in 3s (4934 kB/s) Reading package lists... 0m38.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', 'update'] 0m38.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-yf', 'dist-upgrade'] 0m44.8s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt libacl1 libapt-pkg6.0 libattr1 libdb5.3 libglib2.0-0 libpcre2-8-0 libssl3 openssl r-base-core r-cran-publish tar 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 35.3 MB of archives. After this operation, 35.8 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian sid/main amd64 tar amd64 1.34+dfsg-1.1 [836 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libapt-pkg6.0 amd64 2.5.5 [903 kB] Get:3 http://deb.debian.org/debian sid/main amd64 apt amd64 2.5.5 [1363 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libacl1 amd64 2.3.1-3 [31.5 kB] Get:5 http://deb.debian.org/debian sid/main amd64 libattr1 amd64 1:2.5.1-4 [22.2 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libdb5.3 amd64 5.3.28+dfsg2-1 [697 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libpcre2-8-0 amd64 10.42-1 [261 kB] Get:8 http://deb.debian.org/debian sid/main amd64 libglib2.0-0 amd64 2.74.5-1 [1396 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libssl3 amd64 3.0.7-2 [2007 kB] Get:10 http://deb.debian.org/debian sid/main amd64 openssl amd64 3.0.7-2 [1399 kB] Get:11 http://deb.debian.org/debian sid/main amd64 r-base-core amd64 4.2.2.20221110-2 [26.0 MB] Get:12 http://deb.debian.org/debian sid/main amd64 r-cran-publish all 2023.01.17-1 [466 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 35.3 MB in 0s (96.2 MB/s) (Reading database ... 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Unpacking r-base-core (4.2.2.20221110-2) over (4.2.2.20221110-1+b1) ... Preparing to unpack .../r-cran-publish_2023.01.17-1_all.deb ... Unpacking r-cran-publish (2023.01.17-1) over (2020.12.23-2) ... Setting up libglib2.0-0:amd64 (2.74.5-1) ... No schema files found: doing nothing. Setting up libssl3:amd64 (3.0.7-2) ... Setting up r-base-core (4.2.2.20221110-2) ... Installing new version of config file /etc/R/Makeconf ... Replacing config file /etc/R/Renviron with new version Setting up openssl (3.0.7-2) ... Setting up r-cran-publish (2023.01.17-1) ... Processing triggers for libc-bin (2.36-8) ... 0m44.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-yf', 'dist-upgrade'] 0m44.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m46.1s DUMP: 47977dec6206d6f64802cfb78aeb2b02 - 0m46.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m46.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'show', '--no-all-versions', 'r-cran-publish'] 0m46.4s DUMP: Package: r-cran-publish Version: 2023.01.17-1 Installed-Size: 588 Maintainer: Debian R Packages Maintainers Architecture: all Depends: r-base-core (>= 4.2.2.20221110-2), r-api-4.0, r-cran-prodlim (>= 1.5.4), r-cran-survival (>= 2.38), r-cran-data.table (>= 1.10.4), r-cran-lava (>= 1.5.1), r-cran-multcomp (>= 1.4) Recommends: r-cran-testthat, r-cran-mitools (>= 2.4), r-cran-smcfcs (>= 1.4.1), r-cran-riskregression Suggests: r-cran-rms (>= 6.1.0), r-cran-nlme (>= 3.1-131) Description-en: GNU R format output of various routines This package enabled formatting output of various routines in a suitable way for reports and Publication A bunch of convenience functions that transform the results of some basic statistical analyses into table format nearly ready for publication. This includes descriptive tables, tables of logistic regression and Cox regression results as well as forest plots. Description-md5: 87e6744d4b3c2016c2653da0976c2f80 Homepage: https://cran.r-project.org/package=Publish Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-publish/r-cran-publish_2023.01.17-1_all.deb Size: 466132 MD5sum: 0d3575f11b4285e5e0899061c6f949b7 SHA256: e32454252e5b5890fad845cb331c8e16285525ae1fc1907cbca6337c6d09b9d0 0m46.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'show', '--no-all-versions', 'r-cran-publish'] 0m46.4s INFO: apt-cache knows about the following packages: r-cran-publish 0m46.4s INFO: Running scripts pre_install 0m46.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_database-server'] 0m46.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_database-server'] 0m46.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_exceptions'] 0m46.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_exceptions'] 0m46.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_extras'] 0m46.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_extras'] 0m46.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture'] 0m46.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture'] 0m46.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m46.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m46.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy'] 0m46.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m46.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy'] 0m46.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy', 'r-cran-publish'] 0m46.5s DUMP: r-cran-publish: Installed: 2023.01.17-1 Candidate: 2023.01.17-1 Version table: *** 2023.01.17-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m46.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy', 'r-cran-publish'] 0m46.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-y', 'install', 'r-cran-publish'] 0m47.0s DUMP: Reading package lists... Building dependency tree... Reading state information... r-cran-publish is already the newest version (2023.01.17-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m47.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-y', 'install', 'r-cran-publish'] 0m47.0s INFO: Running scripts post_install 0m47.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_install_exceptions'] 0m47.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_install_exceptions'] 0m47.0s INFO: Running scripts post_distupgrade 0m47.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m47.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m47.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_exceptions'] 0m47.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_exceptions'] 0m47.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m47.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m47.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m47.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m47.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_zz_backports'] 0m47.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_distupgrade_zz_backports'] 0m47.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m47.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m47.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m48.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m48.3s INFO: Running scripts pre_install 0m48.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_database-server'] 0m48.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_database-server'] 0m48.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_exceptions'] 0m48.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_exceptions'] 0m48.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_extras'] 0m48.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_extras'] 0m48.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture'] 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture'] 0m48.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m48.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy'] 0m48.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m48.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy'] 0m48.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy', 'r-cran-publish'] 0m48.5s DUMP: r-cran-publish: Installed: 2023.01.17-1 Candidate: 2023.01.17-1 Version table: *** 2023.01.17-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m48.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-cache', 'policy', 'r-cran-publish'] 0m48.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-y', 'install', 'r-cran-publish=2023.01.17-1'] 0m49.1s DUMP: Reading package lists... Building dependency tree... Reading state information... r-cran-publish is already the newest version (2023.01.17-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m49.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', '-y', 'install', 'r-cran-publish=2023.01.17-1'] 0m49.1s INFO: Running scripts post_install 0m49.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_install_exceptions'] 0m49.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_install_exceptions'] 0m49.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m49.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 0m50.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', '-ac', '--ignore-obsolete'] 0m51.8s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', '-ac', '--ignore-obsolete'] 0m51.8s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m51.8s DUMP: 0.15.6 0m51.8s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m51.8s INFO: Running adequate version 0.15.6 now. 0m51.8s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'r-cran-publish'] 0m51.9s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'r-cran-publish'] 0m51.9s INFO: Running scripts pre_remove 0m51.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m52.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m52.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m52.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m52.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m56.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m56.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m56.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m56.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m56.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m56.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_exceptions'] 0m56.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/pre_remove_exceptions'] 0m56.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m56.6s DUMP: install ok installed apt apt 2.5.5 install ok installed base-files base-files 12.3 install ok installed base-passwd base-passwd 3.6.1 install ok installed bash bash 5.2.15-2 install ok installed bsdutils bsdutils 1:2.38.1-4 install ok installed ca-certificates ca-certificates 20211016 install ok installed coreutils coreutils 9.1-1 install ok installed dash dash 0.5.12-2 install ok installed debconf debconf 1.5.82 install ok installed debian-archive-keyring debian-archive-keyring 2021.1.1 install ok installed debianutils debianutils 5.7-0.4 install ok installed diffutils diffutils 1:3.8-3 install ok installed dpkg dpkg 1.21.18 install ok installed e2fsprogs e2fsprogs 1.46.6~rc1-1.1 install ok installed findutils findutils 4.9.0-4 install ok installed fontconfig fontconfig 2.14.1-3 install ok installed fontconfig-config fontconfig-config 2.14.1-3 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-2 install ok installed gcc-12-base:amd64 gcc-12-base 12.2.0-14 install ok installed gpgv gpgv 2.2.40-1 install ok installed grep grep 3.8-3 install ok installed gzip gzip 1.12-1 install ok installed hostname hostname 3.23+nmu1 install ok installed init-system-helpers init-system-helpers 1.65.2 install ok installed libacl1:amd64 libacl1 2.3.1-3 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.5.5 install ok installed libattr1:amd64 libattr1 1:2.5.1-4 install ok installed libaudit-common libaudit-common 1:3.0.7-1.1 install ok installed libaudit1:amd64 libaudit1 1:3.0.7-1.1+b2 install ok installed libblas3:amd64 libblas3 3.11.0-2 install ok installed libblkid1:amd64 libblkid1 2.38.1-4 install ok installed libbrotli1:amd64 libbrotli1 1.0.9-2+b5 install ok installed libbsd0:amd64 libbsd0 0.11.7-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5+b1 install ok installed libc-bin libc-bin 2.36-8 install ok installed libc6:amd64 libc6 2.36-8 install ok installed libcairo2:amd64 libcairo2 1.16.0-7 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.3-1+b2 install ok installed libcap2:amd64 libcap2 1:2.66-3 install ok installed libcom-err2:amd64 libcom-err2 1.46.6~rc1-1.1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.33-2 install ok installed libcurl4:amd64 libcurl4 7.87.0-2 install ok installed libdatrie1:amd64 libdatrie1 0.2.13-2+b1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.266 install ok installed libdeflate0:amd64 libdeflate0 1.14-1 install ok installed libexpat1:amd64 libexpat1 2.5.0-1 install ok installed libext2fs2:amd64 libext2fs2 1.46.6~rc1-1.1 install ok installed libffi8:amd64 libffi8 3.4.4-1 install ok installed libfile-find-rule-perl libfile-find-rule-perl 0.34-3 install ok installed libfontconfig1:amd64 libfontconfig1 2.14.1-3 install ok installed libfreetype6:amd64 libfreetype6 2.12.1+dfsg-4 install ok installed libfribidi0:amd64 libfribidi0 1.0.8-2.1 install ok installed libgcc-s1:amd64 libgcc-s1 12.2.0-14 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.1-3 install ok installed libgdbm-compat4:amd64 libgdbm-compat4 1.23-3 install ok installed libgdbm6:amd64 libgdbm6 1.23-3 install ok installed libgfortran5:amd64 libgfortran5 12.2.0-14 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.74.5-1 install ok installed libgmp10:amd64 libgmp10 2:6.2.1+dfsg1-1.1 install ok installed libgnutls30:amd64 libgnutls30 3.7.8-4 install ok installed libgomp1:amd64 libgomp1 12.2.0-14 install ok installed libgpg-error0:amd64 libgpg-error0 1.46-1 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.20.1-1 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 6.0.0-1 install ok installed libhogweed6:amd64 libhogweed6 3.8.1-2 install ok installed libice6:amd64 libice6 2:1.0.10-1 install ok installed libicu72:amd64 libicu72 72.1-3 install ok installed libidn2-0:amd64 libidn2-0 2.3.3-1+b1 install ok installed libjbig0:amd64 libjbig0 2.1-6.1 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.2-1+b1 install ok installed libk5crypto3:amd64 libk5crypto3 1.20.1-1 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.20.1-1 install ok installed libkrb5support0:amd64 libkrb5support0 1.20.1-1 install ok installed liblapack3:amd64 liblapack3 3.11.0-2 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.13+dfsg-3 install ok installed liblerc4:amd64 liblerc4 4.0.0+ds-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-1 install ok installed liblzma5:amd64 liblzma5 5.4.1-0.0 install ok installed libmd0:amd64 libmd0 1.0.4-2 install ok installed libmount1:amd64 libmount1 2.38.1-4 install ok installed libnettle8:amd64 libnettle8 3.8.1-2 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.51.0-1 install ok installed libnumber-compare-perl libnumber-compare-perl 0.03-3 install ok installed libp11-kit0:amd64 libp11-kit0 0.24.1-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-6 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-6 install ok installed libpam-runtime libpam-runtime 1.5.2-6 install ok installed libpam0g:amd64 libpam0g 1.5.2-6 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.50.12+ds-1 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.50.12+ds-1 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.50.12+ds-1 install ok installed libpaper-utils libpaper-utils 1.1.28+b1 install ok installed libpaper1:amd64 libpaper1 1.1.28+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-1 install ok installed libperl5.36:amd64 libperl5.36 5.36.0-7 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.42.2-1 install ok installed libpng16-16:amd64 libpng16-16 1.6.39-2 install ok installed libpsl5:amd64 libpsl5 0.21.0-1.2 install ok installed libquadmath0:amd64 libquadmath0 12.2.0-14 install ok installed libreadline8:amd64 libreadline8 8.2-1.3 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b2 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg-10 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg-10 install ok installed libseccomp2:amd64 libseccomp2 2.5.4-1+b2 install ok installed libselinux1:amd64 libselinux1 3.4-1+b4 install ok installed libsemanage-common libsemanage-common 3.4-1 install ok installed libsemanage2:amd64 libsemanage2 3.4-1+b4 install ok installed libsepol2:amd64 libsepol2 3.4-2 install ok installed libsm6:amd64 libsm6 2:1.2.3-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.38.1-4 install ok installed libss2:amd64 libss2 1.46.6~rc1-1.1 install ok installed libssh2-1:amd64 libssh2-1 1.10.0-3+b1 install ok installed libssl3:amd64 libssl3 3.0.7-2 install ok installed libstdc++6:amd64 libstdc++6 12.2.0-14 install ok installed libsystemd0:amd64 libsystemd0 252.4-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-2 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.13+dfsg-1 install ok installed libtext-glob-perl libtext-glob-perl 0.11-3 install ok installed libthai-data libthai-data 0.1.29-1 install ok installed libthai0:amd64 libthai0 0.1.29-1 install ok installed libtiff6:amd64 libtiff6 4.5.0-3 install ok installed libtinfo6:amd64 libtinfo6 6.4-1 install ok installed libtirpc-common libtirpc-common 1.3.3+ds-1 install ok installed libtirpc3:amd64 libtirpc3 1.3.3+ds-1 install ok installed libtk8.6:amd64 libtk8.6 8.6.13-1 install ok installed libudev1:amd64 libudev1 252.4-1 install ok installed libunistring2:amd64 libunistring2 1.0-2 install ok installed libuuid1:amd64 libuuid1 2.38.1-4 install ok installed libwebp7:amd64 libwebp7 1.2.2-2+b3 install ok installed libx11-6:amd64 libx11-6 2:1.8.3-3 install ok installed libx11-data libx11-data 2:1.8.3-3 install ok installed libxau6:amd64 libxau6 1:1.0.9-1 install ok installed libxcb-render0:amd64 libxcb-render0 1.15-1 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.15-1 install ok installed libxcb1:amd64 libxcb1 1.15-1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b1 install ok installed libxft2:amd64 libxft2 2.3.6-1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1.1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1 install ok installed libxt6:amd64 libxt6 1:1.2.1-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.1-1 install ok installed libzstd1:amd64 libzstd1 1.5.2+dfsg2-3 install ok installed littler littler 0.3.17-1 install ok installed login login 1:4.13+dfsg1-1 install ok installed logsave logsave 1.46.6~rc1-1.1 install ok installed mawk mawk 1.3.4.20200120-3.1 install ok installed mount mount 2.38.1-4 install ok installed ncurses-base ncurses-base 6.4-1 install ok installed ncurses-bin ncurses-bin 6.4-1 install ok installed openssl openssl 3.0.7-2 install ok installed passwd passwd 1:4.13+dfsg1-1 install ok installed perl perl 5.36.0-7 install ok installed perl-base perl-base 5.36.0-7 install ok installed perl-modules-5.36 perl-modules-5.36 5.36.0-7 install ok installed r-base-core r-base-core 4.2.2.20221110-2 install ok installed r-cran-codetools r-cran-codetools 0.2-18-1 install ok installed r-cran-data.table r-cran-data.table 1.14.6+dfsg-1 install ok installed r-cran-digest r-cran-digest 0.6.31-1 install ok installed r-cran-future r-cran-future 1.30.0+dfsg-1 install ok installed r-cran-future.apply r-cran-future.apply 1.10.0+dfsg-1 install ok installed r-cran-globals r-cran-globals 0.16.2-1 install ok installed r-cran-kernsmooth r-cran-kernsmooth 2.23-20-1 install ok installed r-cran-lattice r-cran-lattice 0.20-45-3 install ok installed r-cran-lava r-cran-lava 1.7.1+dfsg-1 install ok installed r-cran-listenv r-cran-listenv 0.9.0+dfsg-1 install ok installed r-cran-littler r-cran-littler 0.3.17-1 install ok installed r-cran-mass r-cran-mass 7.3-58.1-1 install ok installed r-cran-matrix r-cran-matrix 1.5-3-1 install ok installed r-cran-multcomp r-cran-multcomp 1.4-20-1 install ok installed r-cran-mvtnorm r-cran-mvtnorm 1.1-3-1+b1 install ok installed r-cran-numderiv r-cran-numderiv 2016.8-1.1-3 install ok installed r-cran-parallelly r-cran-parallelly 1.34.0-1 install ok installed r-cran-pkgkitten r-cran-pkgkitten 0.2.2-2 install ok installed r-cran-prodlim r-cran-prodlim 2019.11.13-1+b1 install ok installed r-cran-progressr r-cran-progressr 0.13.0-1 install ok installed r-cran-publish r-cran-publish 2023.01.17-1 install ok installed r-cran-rcpp r-cran-rcpp 1.0.9-1 install ok installed r-cran-sandwich r-cran-sandwich 3.0-2-1 install ok installed r-cran-squarem r-cran-squarem 2021.1-1 install ok installed r-cran-survival r-cran-survival 3.5-0-1 install ok installed r-cran-th.data r-cran-th.data 1.1-1-1 install ok installed r-cran-zoo r-cran-zoo 1.8-11-1 install ok installed readline-common readline-common 8.2-1.3 install ok installed sed sed 4.9-1 install ok installed sensible-utils sensible-utils 0.0.17+nmu1 install ok installed sysvinit-utils sysvinit-utils 3.06-2 install ok installed tar tar 1.34+dfsg-1.1 install ok installed tzdata tzdata 2022g-2 install ok installed ucf ucf 3.0043 install ok installed unzip unzip 6.0-27 install ok installed usr-is-merged usr-is-merged 35 install ok installed usrmerge usrmerge 35 install ok installed util-linux util-linux 2.38.1-4 install ok installed util-linux-extra util-linux-extra 2.38.1-4 install ok installed x11-common x11-common 1:7.7+23 install ok installed xdg-utils xdg-utils 1.1.3-4.1 install ok installed zip zip 3.0-12 install ok installed zlib1g:amd64 zlib1g 1:1.2.13.dfsg-1 0m56.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m56.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', 'remove', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'libtk8.6:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'littler', 'openssl', 'r-base-core', 'r-cran-codetools', 'r-cran-data.table', 'r-cran-digest', 'r-cran-future', 'r-cran-future.apply', 'r-cran-globals', 'r-cran-kernsmooth', 'r-cran-lattice', 'r-cran-lava', 'r-cran-listenv', 'r-cran-littler', 'r-cran-mass', 'r-cran-matrix', 'r-cran-multcomp', 'r-cran-mvtnorm', 'r-cran-numderiv', 'r-cran-parallelly', 'r-cran-pkgkitten', 'r-cran-prodlim', 'r-cran-progressr', 'r-cran-rcpp', 'r-cran-sandwich', 'r-cran-squarem', 'r-cran-survival', 'r-cran-th.data', 'r-cran-zoo', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'r-cran-publish'] 1m2.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: ca-certificates fontconfig fontconfig-config fonts-dejavu-core libblas3 libbrotli1 libbsd0 libcairo2 libcurl4 libdatrie1 libdeflate0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu72 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.5-0 liblerc4 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libssh2-1 libssl3 libtcl8.6 libthai-data libthai0 libtiff6 libtirpc-common libtirpc3 libtk8.6 libwebp7 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1 libxss1 libxt6 littler openssl r-base-core r-cran-codetools r-cran-data.table r-cran-digest r-cran-future r-cran-future.apply r-cran-globals r-cran-kernsmooth r-cran-lattice r-cran-lava r-cran-listenv r-cran-littler r-cran-mass r-cran-matrix r-cran-multcomp r-cran-mvtnorm r-cran-numderiv r-cran-parallelly r-cran-pkgkitten r-cran-prodlim r-cran-progressr r-cran-publish r-cran-rcpp r-cran-sandwich r-cran-squarem r-cran-survival r-cran-th.data r-cran-zoo readline-common sensible-utils ucf unzip x11-common xdg-utils zip 0 upgraded, 0 newly installed, 106 to remove and 0 not upgraded. After this operation, 193 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13617 files and directories currently installed.) Removing r-cran-publish (2023.01.17-1) ... Removing r-cran-multcomp (1.4-20-1) ... Removing r-cran-th.data (1.1-1-1) ... Removing r-cran-prodlim (2019.11.13-1+b1) ... Removing r-cran-sandwich (3.0-2-1) ... Removing r-cran-rcpp (1.0.9-1) ... Removing r-cran-kernsmooth (2.23-20-1) ... Removing r-cran-data.table (1.14.6+dfsg-1) ... Removing littler (0.3.17-1) ... Removing r-cran-lava (1.7.1+dfsg-1) ... Removing r-cran-future.apply (1.10.0+dfsg-1) ... Removing r-cran-future (1.30.0+dfsg-1) ... Removing r-cran-globals (0.16.2-1) ... Removing r-cran-codetools (0.2-18-1) ... Removing r-cran-progressr (0.13.0-1) ... Removing r-cran-digest (0.6.31-1) ... Removing r-cran-zoo (1.8-11-1) ... Removing r-cran-listenv (0.9.0+dfsg-1) ... Removing r-cran-littler (0.3.17-1) ... Removing r-cran-mass (7.3-58.1-1) ... Removing r-cran-mvtnorm (1.1-3-1+b1) ... Removing r-cran-numderiv (2016.8-1.1-3) ... Removing r-cran-parallelly (1.34.0-1) ... Removing r-cran-pkgkitten (0.2.2-2) ... Removing r-cran-squarem (2021.1-1) ... Removing r-cran-survival (3.5-0-1) ... Removing r-cran-matrix (1.5-3-1) ... Removing r-cran-lattice (0.20-45-3) ... Removing r-base-core (4.2.2.20221110-2) ... Removing ca-certificates (20211016) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libpangocairo-1.0-0:amd64 (1.50.12+ds-1) ... Removing libpangoft2-1.0-0:amd64 (1.50.12+ds-1) ... Removing libpango-1.0-0:amd64 (1.50.12+ds-1) ... Removing fontconfig (2.14.1-3) ... Removing libtk8.6:amd64 (8.6.13-1) ... Removing libxft2:amd64 (2.3.6-1) ... Removing libcairo2:amd64 (1.16.0-7) ... Removing libfontconfig1:amd64 (2.14.1-3) ... Removing fontconfig-config (2.14.1-3) ... Removing fonts-dejavu-core (2.37-2) ... Removing liblapack3:amd64 (3.11.0-2) ... Removing libblas3:amd64 (3.11.0-2) ... Removing libharfbuzz0b:amd64 (6.0.0-1) ... Removing libfreetype6:amd64 (2.12.1+dfsg-4) ... Removing libcurl4:amd64 (7.87.0-2) ... Removing libbrotli1:amd64 (1.0.9-2+b5) ... Removing libxt6:amd64 (1:1.2.1-1) ... Removing libxss1:amd64 (1:1.2.3-1) ... Removing libxcb-shm0:amd64 (1.15-1) ... Removing libsm6:amd64 (2:1.2.3-1) ... Removing libice6:amd64 (2:1.0.10-1) ... Removing libthai0:amd64 (0.1.29-1) ... Removing libdatrie1:amd64 (0.2.13-2+b1) ... Removing libtiff6:amd64 (4.5.0-3) ... Removing libdeflate0:amd64 (1.14-1) ... Removing libexpat1:amd64 (2.5.0-1) ... Removing libfribidi0:amd64 (1.0.8-2.1) ... Removing libgfortran5:amd64 (12.2.0-14) ... Removing libglib2.0-0:amd64 (2.74.5-1) ... Removing libgomp1:amd64 (12.2.0-14) ... Removing libgraphite2-3:amd64 (1.3.14-1) ... Removing libtirpc3:amd64 (1.3.3+ds-1) ... Removing libgssapi-krb5-2:amd64 (1.20.1-1) ... Removing libicu72:amd64 (72.1-3) ... Removing libjbig0:amd64 (2.1-6.1) ... Removing libjpeg62-turbo:amd64 (1:2.1.2-1+b1) ... Removing libkrb5-3:amd64 (1.20.1-1) ... Removing libk5crypto3:amd64 (1.20.1-1) ... Removing libkeyutils1:amd64 (1.6.3-2) ... Removing libkrb5support0:amd64 (1.20.1-1) ... Removing libldap-2.5-0:amd64 (2.5.13+dfsg-3) ... Removing liblerc4:amd64 (4.0.0+ds-2) ... Removing libnghttp2-14:amd64 (1.51.0-1) ... Removing libpaper-utils (1.1.28+b1) ... Removing libpaper1:amd64 (1.1.28+b1) ... Removing libpixman-1-0:amd64 (0.42.2-1) ... Removing libpng16-16:amd64 (1.6.39-2) ... Removing libpsl5:amd64 (0.21.0-1.2) ... Removing libquadmath0:amd64 (12.2.0-14) ... Removing libreadline8:amd64 (8.2-1.3) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Removing libsasl2-2:amd64 (2.1.28+dfsg-10) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg-10) ... Removing libssh2-1:amd64 (1.10.0-3+b1) ... Removing openssl (3.0.7-2) ... Removing libssl3:amd64 (3.0.7-2) ... Removing libtcl8.6:amd64 (8.6.13+dfsg-1) ... Removing libthai-data (0.1.29-1) ... Removing libtirpc-common (1.3.3+ds-1) ... Removing libwebp7:amd64 (1.2.2-2+b3) ... Removing libxcb-render0:amd64 (1.15-1) ... Removing libxext6:amd64 (2:1.3.4-1+b1) ... Removing libxrender1:amd64 (1:0.9.10-1.1) ... Removing readline-common (8.2-1.3) ... Removing ucf (3.0043) ... Removing sensible-utils (0.0.17+nmu1) ... Removing unzip (6.0-27) ... Removing x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing xdg-utils (1.1.3-4.1) ... Removing zip (3.0-12) ... Removing libx11-6:amd64 (2:1.8.3-3) ... Removing libxcb1:amd64 (1.15-1) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.11.7-1) ... Removing libx11-data (2:1.8.3-3) ... Removing libxau6:amd64 (1:1.0.9-1) ... Processing triggers for libc-bin (2.36-8) ... 1m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', 'remove', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'libtk8.6:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'littler', 'openssl', 'r-base-core', 'r-cran-codetools', 'r-cran-data.table', 'r-cran-digest', 'r-cran-future', 'r-cran-future.apply', 'r-cran-globals', 'r-cran-kernsmooth', 'r-cran-lattice', 'r-cran-lava', 'r-cran-listenv', 'r-cran-littler', 'r-cran-mass', 'r-cran-matrix', 'r-cran-multcomp', 'r-cran-mvtnorm', 'r-cran-numderiv', 'r-cran-parallelly', 'r-cran-pkgkitten', 'r-cran-prodlim', 'r-cran-progressr', 'r-cran-rcpp', 'r-cran-sandwich', 'r-cran-squarem', 'r-cran-survival', 'r-cran-th.data', 'r-cran-zoo', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'r-cran-publish'] 1m2.0s INFO: Running scripts post_remove 1m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_remove_exceptions'] 1m2.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_remove_exceptions'] 1m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg', '--purge', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'libtk8.6:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'littler', 'openssl', 'r-base-core', 'r-cran-codetools', 'r-cran-data.table', 'r-cran-digest', 'r-cran-future', 'r-cran-future.apply', 'r-cran-globals', 'r-cran-kernsmooth', 'r-cran-lattice', 'r-cran-lava', 'r-cran-listenv', 'r-cran-littler', 'r-cran-mass', 'r-cran-matrix', 'r-cran-multcomp', 'r-cran-mvtnorm', 'r-cran-numderiv', 'r-cran-parallelly', 'r-cran-pkgkitten', 'r-cran-prodlim', 'r-cran-progressr', 'r-cran-rcpp', 'r-cran-sandwich', 'r-cran-squarem', 'r-cran-survival', 'r-cran-th.data', 'r-cran-zoo', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip'] 1m3.1s DUMP: (Reading database ... 8092 files and directories currently installed.) Purging configuration files for ca-certificates (20211016) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for fontconfig (2.14.1-3) ... Purging configuration files for fontconfig-config (2.14.1-3) ... Purging configuration files for fonts-dejavu-core (2.37-2) ... dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.74.5-1) ... dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.20.1-1) ... dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed dpkg: warning: ignoring request to remove liblerc4 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpaper-utils which isn't installed Purging configuration files for libpaper1:amd64 (1.1.28+b1) ... dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed dpkg: warning: ignoring request to remove libssl3 which isn't installed dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtiff6 which isn't installed Purging configuration files for libtirpc-common (1.3.3+ds-1) ... dpkg: warning: ignoring request to remove libtirpc3 which isn't installed dpkg: warning: ignoring request to remove libtk8.6 which isn't installed dpkg: warning: ignoring request to remove libwebp7 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxss1 which isn't installed dpkg: warning: ignoring request to remove libxt6 which isn't installed dpkg: warning: ignoring request to remove littler which isn't installed Purging configuration files for openssl (3.0.7-2) ... Purging configuration files for r-base-core (4.2.2.20221110-2) ... dpkg: warning: ignoring request to remove r-cran-codetools which isn't installed dpkg: warning: ignoring request to remove r-cran-data.table which isn't installed dpkg: warning: ignoring request to remove r-cran-digest which isn't installed dpkg: warning: ignoring request to remove r-cran-future which isn't installed dpkg: warning: ignoring request to remove r-cran-future.apply which isn't installed dpkg: warning: ignoring request to remove r-cran-globals which isn't installed dpkg: warning: ignoring request to remove r-cran-kernsmooth which isn't installed dpkg: warning: ignoring request to remove r-cran-lattice which isn't installed dpkg: warning: ignoring request to remove r-cran-lava which isn't installed dpkg: warning: ignoring request to remove r-cran-listenv which isn't installed dpkg: warning: ignoring request to remove r-cran-littler which isn't installed dpkg: warning: ignoring request to remove r-cran-mass which isn't installed dpkg: warning: ignoring request to remove r-cran-matrix which isn't installed dpkg: warning: ignoring request to remove r-cran-multcomp which isn't installed dpkg: warning: ignoring request to remove r-cran-mvtnorm which isn't installed dpkg: warning: ignoring request to remove r-cran-numderiv which isn't installed dpkg: warning: ignoring request to remove r-cran-parallelly which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgkitten which isn't installed dpkg: warning: ignoring request to remove r-cran-prodlim which isn't installed dpkg: warning: ignoring request to remove r-cran-progressr which isn't installed dpkg: warning: ignoring request to remove r-cran-rcpp which isn't installed dpkg: warning: ignoring request to remove r-cran-sandwich which isn't installed dpkg: warning: ignoring request to remove r-cran-squarem which isn't installed dpkg: warning: ignoring request to remove r-cran-survival which isn't installed dpkg: warning: ignoring request to remove r-cran-th.data which isn't installed dpkg: warning: ignoring request to remove r-cran-zoo which isn't installed Purging configuration files for readline-common (8.2-1.3) ... dpkg: warning: ignoring request to remove sensible-utils which isn't installed Purging configuration files for ucf (3.0043) ... Purging configuration files for unzip (6.0-27) ... Purging configuration files for x11-common (1:7.7+23) ... dpkg: warning: ignoring request to remove xdg-utils which isn't installed dpkg: warning: ignoring request to remove zip which isn't installed 1m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg', '--purge', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libblas3:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libcairo2:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu72:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.5-0:amd64', 'liblerc4:amd64', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl3:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3:amd64', 'libtk8.6:amd64', 'libwebp7:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'littler', 'openssl', 'r-base-core', 'r-cran-codetools', 'r-cran-data.table', 'r-cran-digest', 'r-cran-future', 'r-cran-future.apply', 'r-cran-globals', 'r-cran-kernsmooth', 'r-cran-lattice', 'r-cran-lava', 'r-cran-listenv', 'r-cran-littler', 'r-cran-mass', 'r-cran-matrix', 'r-cran-multcomp', 'r-cran-mvtnorm', 'r-cran-numderiv', 'r-cran-parallelly', 'r-cran-pkgkitten', 'r-cran-prodlim', 'r-cran-progressr', 'r-cran-rcpp', 'r-cran-sandwich', 'r-cran-squarem', 'r-cran-survival', 'r-cran-th.data', 'r-cran-zoo', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip'] 1m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg', '--purge', 'r-cran-publish'] 1m3.1s DUMP: dpkg: warning: ignoring request to remove r-cran-publish which isn't installed 1m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg', '--purge', 'r-cran-publish'] 1m3.1s INFO: Running scripts post_purge 1m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_purge_exceptions'] 1m3.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_purge_exceptions'] 1m3.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg', '--purge', '--pending'] 1m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg', '--purge', '--pending'] 1m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg', '--remove', '--pending'] 1m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg', '--remove', '--pending'] 1m3.2s INFO: Running scripts post_test 1m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_test_exceptions'] 1m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'tmp/scripts/post_test_exceptions'] 1m3.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 1m3.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 1m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg-divert', '--list'] 1m3.7s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'dpkg-divert', '--list'] 1m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', 'clean'] 1m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl', 'apt-get', 'clean'] 1m3.8s DEBUG: Recording chroot state 1m4.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/shm'] 1m4.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/shm'] 1m4.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/console'] 1m4.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/console'] 1m4.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/ptmx'] 1m4.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/ptmx'] 1m4.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/pts'] 1m4.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/dev/pts'] 1m4.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/proc'] 1m5.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl/proc'] 1m5.0s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 1m5.0s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpgge2f6rl'] 1m5.0s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpgge2f6rl 1m5.0s INFO: PASS: Upgrading between Debian distributions. 1m5.0s INFO: PASS: All tests. 1m5.0s INFO: piuparts run ends. ret=0 End: 2023-01-22 04:01:27 GMT