Start: 2020-06-17 11:22:03 GMT [testing] Package: r-cran-tcr Source: r-cran-tcr (2.2.4.1-1) Version: 2.2.4.1-1+b1 Installed-Size: 4808 Maintainer: Debian R Packages Maintainers Architecture: amd64 Depends: r-base-core (>= 4.0.0-3), r-api-4.0, r-cran-ggplot2 (>= 1.0.0), r-cran-dplyr (>= 0.4.0), r-cran-gridextra (>= 0.9.0), r-cran-reshape2 (>= 1.2.0), r-cran-igraph (>= 0.7.1), r-cran-rcpp (>= 0.11.1), r-cran-data.table (>= 1.9.0), r-cran-gtable (>= 0.1.2), r-cran-stringdist (>= 0.7.3), r-cran-scales (>= 0.3.0), libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2) Suggests: r-cran-knitr (>= 1.8), r-cran-roxygen2 (>= 3.0.0), r-cran-rmarkdown (>= 1.0) Description: Advanced Data Analysis of Immune Receptor Repertoires Homepage: https://cran.r-project.org/package=tcR Description-md5: 3ea4a31baf99f15e278456148b0d7808 Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-tcr/r-cran-tcr_2.2.4.1-1+b1_amd64.deb Size: 3258512 MD5sum: 7747638cd8ba7158520e2fe4d9885ee5 SHA256: 81bd8a3f54d0d3a8ae0cba59a5e740a6a004c7a0cb847b950c531f8f58504a38 [sid] Package: r-cran-tcr Version: 2.3.2+ds-1 Installed-Size: 2114 Maintainer: Debian R Packages Maintainers Architecture: amd64 Depends: r-base-core (>= 4.0.1-1), r-api-4.0, r-cran-ggplot2 (>= 1.0.0), r-cran-dplyr (>= 0.4.0), r-cran-gridextra (>= 0.9.0), r-cran-reshape2 (>= 1.2.0), r-cran-igraph (>= 0.7.1), r-cran-rcpp (>= 0.11.1), r-cran-data.table (>= 1.9.0), r-cran-gtable (>= 0.1.2), r-cran-stringdist (>= 0.7.3), r-cran-scales (>= 0.3.0), libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2) Suggests: r-cran-knitr (>= 1.8), r-cran-roxygen2 (>= 3.0.0), r-cran-rmarkdown (>= 1.0) Description: Advanced Data Analysis of Immune Receptor Repertoires Homepage: https://cran.r-project.org/package=tcR Description-md5: dba357117d8ee7f46c5702d38e5efd55 Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-tcr/r-cran-tcr_2.3.2+ds-1_amd64.deb Size: 1958992 MD5sum: 6a6b9ab872c2658e622608526f34dfae SHA256: b416893c777e283187566c23555f566038746512e07ae1db2678a44f124af2c6 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt r-cran-tcr=2.3.2+ds-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.2~202004292038~1.1.1-19-g418151e2 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz -d testing -d sid -B /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat --apt r-cran-tcr=2.3.2+ds-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpifqpkm5v 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpifqpkm5v 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz'] 0m2.0s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/bullseye_amd64.tar.gz'] 0m2.0s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/proc'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/proc'] 0m2.1s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/pts'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/pts'] 0m2.1s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/ptmx'] 0m2.1s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/ptmx'] 0m2.1s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/console'] 0m2.1s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/console'] 0m2.1s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/shm'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/shm'] 0m2.1s DEBUG: sources.list: deb http://deb.debian.org/debian/ bullseye main 0m2.1s DEBUG: Created policy-rc.d and chmodded it. 0m2.1s DEBUG: Created resolv.conf. 0m2.1s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpifqpkm5v/tmp/scripts/ 0m2.1s INFO: Running scripts post_chroot_unpack 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', 'update'] 0m5.1s DUMP: Get:1 http://deb.debian.org/debian bullseye InRelease [116 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 Packages [7706 kB] Get:3 http://deb.debian.org/debian bullseye/main Translation-en [5897 kB] Fetched 13.7 MB in 2s (5513 kB/s) Reading package lists... 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', 'update'] 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-yf', 'dist-upgrade'] 0m6.4s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: libgnutls30 libgpg-error0 perl-base 3 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2902 kB of archives. After this operation, 20.5 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 perl-base amd64 5.30.3-4 [1576 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 libgnutls30 amd64 3.6.14-2 [1248 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 libgpg-error0 amd64 1.38-1 [77.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2902 kB in 0s (11.1 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6515 files and directories currently installed.) Preparing to unpack .../perl-base_5.30.3-4_amd64.deb ... Unpacking perl-base (5.30.3-4) over (5.30.2-1) ... Setting up perl-base (5.30.3-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6515 files and directories currently installed.) Preparing to unpack .../libgnutls30_3.6.14-2_amd64.deb ... Unpacking libgnutls30:amd64 (3.6.14-2) over (3.6.14-1) ... Setting up libgnutls30:amd64 (3.6.14-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6515 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.38-1_amd64.deb ... Unpacking libgpg-error0:amd64 (1.38-1) over (1.37-1) ... Setting up libgpg-error0:amd64 (1.38-1) ... Processing triggers for libc-bin (2.30-8) ... 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-yf', 'dist-upgrade'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.0s DUMP: dc45e685426e796ffc237561e74c4a3e - 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.1s INFO: Running scripts post_setup 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_dummy_users'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_dummy_users'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_forbid_home'] 0m8.5s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_forbid_home'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.5s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' dpkg-divert: warning: diverting file '/bin/sync' from an Essential package with rename is dangerous, use --no-rename '/bin/sync' -> 'true' 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_minimize'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_minimize'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_zz_backports'] 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_setup_zz_backports'] 0m8.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.5s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 2.1.6 install ok installed base-files base-files 11 install ok installed base-passwd base-passwd 3.5.47 install ok installed bash bash 5.0-6 install ok installed bsdutils bsdutils 1:2.35.2-2 install ok installed coreutils coreutils 8.30-3+b1 install ok installed dash dash 0.5.10.2-7 install ok installed debconf debconf 1.5.74 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.9.1 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.7 install ok installed e2fsprogs e2fsprogs 1.45.6-1 install ok installed findutils findutils 4.7.0-1 install ok installed gcc-10-base:amd64 gcc-10-base 10.1.0-3 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-13 install ok installed gpgv gpgv 2.2.20-1 install ok installed grep grep 3.4-1 install ok installed gzip gzip 1.10-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.57 install ok installed libacl1:amd64 libacl1 2.2.53-8 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.1.6 install ok installed libattr1:amd64 libattr1 1:2.4.48-5 install ok installed libaudit-common libaudit-common 1:2.8.5-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.5-3+b1 install ok installed libblkid1:amd64 libblkid1 2.35.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-3 install ok installed libc-bin libc-bin 2.30-8 install ok installed libc6:amd64 libc6 2.30-8 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2 install ok installed libcom-err2:amd64 libcom-err2 1.45.6-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.16-1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.6 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.252 install ok installed libext2fs2:amd64 libext2fs2 1.45.6-1 install ok installed libffi7:amd64 libffi7 3.3-4 install ok installed libgcc-s1:amd64 libgcc-s1 10.1.0-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.5-5 install ok installed libgmp10:amd64 libgmp10 2:6.2.0+dfsg-4 install ok installed libgnutls30:amd64 libgnutls30 3.6.14-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-1 install ok installed libhogweed5:amd64 libhogweed5 3.5.1+really3.5.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.2-2 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+b1 install ok installed libmount1:amd64 libmount1 2.35.2-2 install ok installed libnettle7:amd64 libnettle7 3.5.1+really3.5.1-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.20-1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.34-7 install ok installed libpcre3:amd64 libpcre3 2:8.39-12+b1 install ok installed libseccomp2:amd64 libseccomp2 2.4.3-1+b1 install ok installed libselinux1:amd64 libselinux1 3.0-1+b3 install ok installed libsemanage-common libsemanage-common 3.0-1 install ok installed libsemanage1:amd64 libsemanage1 3.0-1+b3 install ok installed libsepol1:amd64 libsepol1 3.0-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.35.2-2 install ok installed libss2:amd64 libss2 1.45.6-1 install ok installed libstdc++6:amd64 libstdc++6 10.1.0-3 install ok installed libsystemd0:amd64 libsystemd0 245.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2 install ok installed libtinfo6:amd64 libtinfo6 6.2-1 install ok installed libudev1:amd64 libudev1 245.6-1 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.35.2-2 install ok installed libzstd1:amd64 libzstd1 1.4.5+dfsg-2 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.45.6-1 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.35.2-2 install ok installed ncurses-base ncurses-base 6.2-1 install ok installed ncurses-bin ncurses-bin 6.2-1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.30.3-4 install ok installed sed sed 4.7-1 install ok installed sysvinit-utils sysvinit-utils 2.96-3 install ok installed tar tar 1.30+dfsg-7 install ok installed tzdata tzdata 2020a-1 install ok installed util-linux util-linux 2.35.2-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2 0m8.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.5s DEBUG: Loading chroot meta data from /srv/piuparts.debian.org/slave/refchroot/testing2sid/reference-chroot-metadata.dat 0m8.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m8.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m8.8s INFO: Running scripts is_testable 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/is_testable_uninstallable'] 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/is_testable_uninstallable'] 0m8.8s INFO: Running scripts pre_test 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_test_exceptions'] 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_test_exceptions'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_test_root_password'] 0m8.8s DUMP: New password: Retype new password: passwd: password updated successfully 0m8.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_test_root_password'] 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'show', '--no-all-versions', 'r-cran-tcr'] 0m9.0s DUMP: Package: r-cran-tcr Source: r-cran-tcr (2.2.4.1-1) Version: 2.2.4.1-1+b1 Installed-Size: 4808 Maintainer: Debian R Packages Maintainers Architecture: amd64 Depends: r-base-core (>= 4.0.0-3), r-api-4.0, r-cran-ggplot2 (>= 1.0.0), r-cran-dplyr (>= 0.4.0), r-cran-gridextra (>= 0.9.0), r-cran-reshape2 (>= 1.2.0), r-cran-igraph (>= 0.7.1), r-cran-rcpp (>= 0.11.1), r-cran-data.table (>= 1.9.0), r-cran-gtable (>= 0.1.2), r-cran-stringdist (>= 0.7.3), r-cran-scales (>= 0.3.0), libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2) Suggests: r-cran-knitr (>= 1.8), r-cran-roxygen2 (>= 3.0.0), r-cran-rmarkdown (>= 1.0) Description-en: Advanced Data Analysis of Immune Receptor Repertoires Cells of the immune system are the grand exception to the rule that all cells of an individuum have (mostly exact) copies of the same DNA. B cells (which produce antibodies) and T cells (which communicate with cells) however have a section of their DNA with genes of the groups V, D and J that are reorganised within the genomic DNA to provide the flexibility to deal with yet unknown pathogens. . This package provides a platform for the advanced analysis of T cell receptor repertoire data and its visualisations. Description-md5: 3ea4a31baf99f15e278456148b0d7808 Homepage: https://cran.r-project.org/package=tcR Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-tcr/r-cran-tcr_2.2.4.1-1+b1_amd64.deb Size: 3258512 MD5sum: 7747638cd8ba7158520e2fe4d9885ee5 SHA256: 81bd8a3f54d0d3a8ae0cba59a5e740a6a004c7a0cb847b950c531f8f58504a38 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'show', '--no-all-versions', 'r-cran-tcr'] 0m9.0s INFO: apt-cache knows about the following packages: r-cran-tcr 0m9.0s INFO: Running scripts pre_install 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_database-server'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_database-server'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_exceptions'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_exceptions'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_extras'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_extras'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy'] 0m9.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian bullseye/main amd64 Packages release o=Debian,a=testing,n=bullseye,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m9.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy'] 0m9.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy', 'r-cran-tcr'] 0m9.1s DUMP: r-cran-tcr: Installed: (none) Candidate: 2.2.4.1-1+b1 Version table: 2.2.4.1-1+b1 500 500 http://deb.debian.org/debian bullseye/main amd64 Packages 0m9.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy', 'r-cran-tcr'] 0m9.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-y', 'install', 'r-cran-tcr'] 0m31.1s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates fontconfig fontconfig-config fonts-dejavu-core libasan5 libatomic1 libblas3 libboost-dev libboost1.71-dev libbrotli1 libbsd0 libc-dev-bin libc6-dev libcairo2 libcrypt-dev libcurl4 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgcc-9-dev libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu67 libitm1 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.4-2 libldap-common liblsan0 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libssh2-1 libssl1.1 libstdc++-9-dev libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtsan0 libubsan1 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 linux-libc-dev littler openssl r-base-core r-cran-assertthat r-cran-backports r-cran-bh r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-data.table r-cran-desc r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-igraph r-cran-isoband r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr r-cran-praise r-cran-prettyunits r-cran-processx r-cran-ps r-cran-purrr r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-reshape2 r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-stringdist r-cran-stringi r-cran-stringr r-cran-testthat r-cran-tibble r-cran-tidyselect r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr readline-common sensible-utils ucf unzip x11-common xdg-utils zip Suggested packages: libboost-doc libboost1.71-doc libboost-atomic1.71-dev libboost-chrono1.71-dev libboost-container1.71-dev libboost-context1.71-dev libboost-contract1.71-dev libboost-coroutine1.71-dev libboost-date-time1.71-dev libboost-exception1.71-dev libboost-fiber1.71-dev libboost-filesystem1.71-dev libboost-graph1.71-dev libboost-graph-parallel1.71-dev libboost-iostreams1.71-dev libboost-locale1.71-dev libboost-log1.71-dev libboost-math1.71-dev libboost-mpi1.71-dev libboost-mpi-python1.71-dev libboost-numpy1.71-dev libboost-program-options1.71-dev libboost-python1.71-dev libboost-random1.71-dev libboost-regex1.71-dev libboost-serialization1.71-dev libboost-stacktrace1.71-dev libboost-system1.71-dev libboost-test1.71-dev libboost-thread1.71-dev libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev libboost1.71-tools-dev libmpfrc++-dev libntl-dev glibc-doc manpages-dev krb5-doc krb5-user libstdc++-9-doc tcl8.6 tk8.6 elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html r-cran-covr r-cran-htmlwidgets r-cran-knitr r-cran-rmarkdown r-cran-prettycode r-cran-kernsmooth r-cran-kernlab r-cran-mvtnorm r-cran-vcd r-cran-shiny r-cran-shinyjs r-cran-png r-cran-jpeg r-cran-viridis r-cran-bit64 r-cran-curl r-cran-r.utils r-cran-xts r-cran-zoo r-cran-yaml r-cran-dbi r-cran-dbplyr r-cran-lubridate r-cran-rmysql r-cran-rpostgresql r-cran-broom r-cran-readr r-cran-unitizer r-cran-hmisc r-cran-maps r-cran-maptools r-cran-multcomp r-cran-quantreg r-cran-rpart r-cran-sf r-cran-svglite r-cran-rsqlite r-cran-forcats r-cran-ape r-bioc-graph r-cran-rgl r-cran-magick r-cran-getopt r-cran-bitops r-cran-doparallel r-cran-foreach r-cran-iterators r-cran-itertools r-cran-inline r-cran-mockr r-cran-dichromat r-cran-tinytest r-cran-roxygen2 r-cran-devtools r-cran-usethis r-cran-blob r-cran-hms r-cran-htmltools r-cran-tidyr r-cran-zeallot readline-doc Recommended packages: manpages manpages-dev libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales publicsuffix libsasl2-modules r-recommended r-base-dev r-doc-html r-cran-cliapp r-cran-mockery r-cran-rsqlite r-cran-hms r-cran-bit64 r-cran-sp r-cran-mapproj r-cran-hexbin r-cran-vdiffr r-cran-lubridate r-cran-domc r-cran-abind r-cran-codetools r-cran-curl r-cran-rmarkdown r-cran-htmltools r-cran-htmlwidgets r-cran-xml2 r-cran-knitr r-cran-mockr r-cran-generics r-cran-dbi libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: ca-certificates fontconfig fontconfig-config fonts-dejavu-core libasan5 libatomic1 libblas3 libboost-dev libboost1.71-dev libbrotli1 libbsd0 libc-dev-bin libc6-dev libcairo2 libcrypt-dev libcurl4 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgcc-9-dev libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu67 libitm1 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.4-2 libldap-common liblsan0 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libssh2-1 libssl1.1 libstdc++-9-dev libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtsan0 libubsan1 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 linux-libc-dev littler openssl r-base-core r-cran-assertthat r-cran-backports r-cran-bh r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-data.table r-cran-desc r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-igraph r-cran-isoband r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr r-cran-praise r-cran-prettyunits r-cran-processx r-cran-ps r-cran-purrr r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-reshape2 r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-stringdist r-cran-stringi r-cran-stringr r-cran-tcr r-cran-testthat r-cran-tibble r-cran-tidyselect r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr readline-common sensible-utils ucf unzip x11-common xdg-utils zip 0 upgraded, 153 newly installed, 0 to remove and 0 not upgraded. Need to get 119 MB of archives. After this operation, 412 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.0-4 [72.5 kB] Get:2 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:3 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:4 http://deb.debian.org/debian bullseye/main amd64 ucf all 3.0042 [73.9 kB] Get:5 http://deb.debian.org/debian bullseye/main amd64 libssl1.1 amd64 1.1.1g-1 [1543 kB] Get:6 http://deb.debian.org/debian bullseye/main amd64 openssl amd64 1.1.1g-1 [846 kB] Get:7 http://deb.debian.org/debian bullseye/main amd64 ca-certificates all 20200601 [158 kB] Get:8 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.9-1 [94.3 kB] Get:9 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-2 [292 kB] Get:10 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.1-2 [392 kB] Get:11 http://deb.debian.org/debian bullseye/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get:12 http://deb.debian.org/debian bullseye/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get:13 http://deb.debian.org/debian bullseye/main amd64 libfontconfig1 amd64 2.13.1-4.2 [347 kB] Get:14 http://deb.debian.org/debian bullseye/main amd64 fontconfig amd64 2.13.1-4.2 [417 kB] Get:15 http://deb.debian.org/debian bullseye/main amd64 libasan5 amd64 9.3.0-13 [389 kB] Get:16 http://deb.debian.org/debian bullseye/main amd64 libatomic1 amd64 10.1.0-3 [9000 B] Get:17 http://deb.debian.org/debian bullseye/main amd64 libblas3 amd64 3.9.0-2 [153 kB] Get:18 http://deb.debian.org/debian bullseye/main amd64 libgomp1 amd64 10.1.0-3 [99.2 kB] Get:19 http://deb.debian.org/debian bullseye/main amd64 libitm1 amd64 10.1.0-3 [25.7 kB] Get:20 http://deb.debian.org/debian bullseye/main amd64 liblsan0 amd64 10.1.0-3 [141 kB] Get:21 http://deb.debian.org/debian bullseye/main amd64 libtsan0 amd64 10.1.0-3 [313 kB] Get:22 http://deb.debian.org/debian bullseye/main amd64 libubsan1 amd64 10.1.0-3 [134 kB] Get:23 http://deb.debian.org/debian bullseye/main amd64 libquadmath0 amd64 10.1.0-3 [145 kB] Get:24 http://deb.debian.org/debian bullseye/main amd64 libgcc-9-dev amd64 9.3.0-13 [2346 kB] Get:25 http://deb.debian.org/debian bullseye/main amd64 libc-dev-bin amd64 2.30-8 [281 kB] Get:26 http://deb.debian.org/debian bullseye/main amd64 linux-libc-dev amd64 5.6.14-1 [1114 kB] Get:27 http://deb.debian.org/debian bullseye/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:28 http://deb.debian.org/debian bullseye/main amd64 libc6-dev amd64 2.30-8 [2631 kB] Get:29 http://deb.debian.org/debian bullseye/main amd64 libstdc++-9-dev amd64 9.3.0-13 [1701 kB] Get:30 http://deb.debian.org/debian bullseye/main amd64 libboost1.71-dev amd64 1.71.0-6+b2 [9097 kB] Get:31 http://deb.debian.org/debian bullseye/main amd64 libboost-dev amd64 1.71.0.3 [4340 B] Get:32 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.7-6.1 [267 kB] Get:33 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:34 http://deb.debian.org/debian bullseye/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get:35 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get:36 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:37 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-2 [139 kB] Get:38 http://deb.debian.org/debian bullseye/main amd64 libx11-data all 2:1.6.9-2 [298 kB] Get:39 http://deb.debian.org/debian bullseye/main amd64 libx11-6 amd64 2:1.6.9-2+b1 [756 kB] Get:40 http://deb.debian.org/debian bullseye/main amd64 libxcb-render0 amd64 1.14-2 [111 kB] Get:41 http://deb.debian.org/debian bullseye/main amd64 libxcb-shm0 amd64 1.14-2 [101 kB] Get:42 http://deb.debian.org/debian bullseye/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get:43 http://deb.debian.org/debian bullseye/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get:44 http://deb.debian.org/debian bullseye/main amd64 libcairo2 amd64 1.16.0-4 [689 kB] Get:45 http://deb.debian.org/debian bullseye/main amd64 libkrb5support0 amd64 1.17-10 [64.6 kB] Get:46 http://deb.debian.org/debian bullseye/main amd64 libk5crypto3 amd64 1.17-10 [115 kB] Get:47 http://deb.debian.org/debian bullseye/main amd64 libkeyutils1 amd64 1.6.1-2 [15.4 kB] Get:48 http://deb.debian.org/debian bullseye/main amd64 libkrb5-3 amd64 1.17-10 [366 kB] Get:49 http://deb.debian.org/debian bullseye/main amd64 libgssapi-krb5-2 amd64 1.17-10 [156 kB] Get:50 http://deb.debian.org/debian bullseye/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [69.0 kB] Get:51 http://deb.debian.org/debian bullseye/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [106 kB] Get:52 http://deb.debian.org/debian bullseye/main amd64 libldap-common all 2.4.50+dfsg-1 [92.9 kB] Get:53 http://deb.debian.org/debian bullseye/main amd64 libldap-2.4-2 amd64 2.4.50+dfsg-1 [228 kB] Get:54 http://deb.debian.org/debian bullseye/main amd64 libnghttp2-14 amd64 1.41.0-2 [72.4 kB] Get:55 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.1 [55.3 kB] Get:56 http://deb.debian.org/debian bullseye/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b1 [60.8 kB] Get:57 http://deb.debian.org/debian bullseye/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get:58 http://deb.debian.org/debian bullseye/main amd64 libcurl4 amd64 7.68.0-1 [321 kB] Get:59 http://deb.debian.org/debian bullseye/main amd64 libdatrie1 amd64 0.2.12-3 [39.5 kB] Get:60 http://deb.debian.org/debian bullseye/main amd64 libfribidi0 amd64 1.0.8-2 [64.8 kB] Get:61 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.1.0-3 [727 kB] Get:62 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-0 amd64 2.64.3-1 [1341 kB] Get:63 http://deb.debian.org/debian bullseye/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get:64 http://deb.debian.org/debian bullseye/main amd64 libharfbuzz0b amd64 2.6.4-1+b1 [1361 kB] Get:65 http://deb.debian.org/debian bullseye/main amd64 x11-common all 1:7.7+20 [252 kB] Get:66 http://deb.debian.org/debian bullseye/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get:67 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-2 [8610 kB] Get:68 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get:69 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+b1 [134 kB] Get:70 http://deb.debian.org/debian bullseye/main amd64 liblapack3 amd64 3.9.0-2 [2169 kB] Get:71 http://deb.debian.org/debian bullseye/main amd64 libthai-data all 0.1.28-3 [170 kB] Get:72 http://deb.debian.org/debian bullseye/main amd64 libthai0 amd64 0.1.28-3 [54.2 kB] Get:73 http://deb.debian.org/debian bullseye/main amd64 libpango-1.0-0 amd64 1.44.7-4 [183 kB] Get:74 http://deb.debian.org/debian bullseye/main amd64 libpangoft2-1.0-0 amd64 1.44.7-4 [59.0 kB] Get:75 http://deb.debian.org/debian bullseye/main amd64 libpangocairo-1.0-0 amd64 1.44.7-4 [48.9 kB] Get:76 http://deb.debian.org/debian bullseye/main amd64 libpaper1 amd64 1.1.28+b1 [21.6 kB] Get:77 http://deb.debian.org/debian bullseye/main amd64 libpaper-utils amd64 1.1.28+b1 [18.3 kB] Get:78 http://deb.debian.org/debian bullseye/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get:79 http://deb.debian.org/debian bullseye/main amd64 libtcl8.6 amd64 8.6.10+dfsg-1 [1007 kB] Get:80 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2+b1 [261 kB] Get:81 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.1.0+git191117-2 [271 kB] Get:82 http://deb.debian.org/debian bullseye/main amd64 libxft2 amd64 2.3.2-2 [57.2 kB] Get:83 http://deb.debian.org/debian bullseye/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get:84 http://deb.debian.org/debian bullseye/main amd64 libtk8.6 amd64 8.6.10-1 [773 kB] Get:85 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-5+b1 [710 kB] Get:86 http://deb.debian.org/debian bullseye/main amd64 libxt6 amd64 1:1.1.5-1+b3 [190 kB] Get:87 http://deb.debian.org/debian bullseye/main amd64 zip amd64 3.0-11+b1 [234 kB] Get:88 http://deb.debian.org/debian bullseye/main amd64 unzip amd64 6.0-25 [172 kB] Get:89 http://deb.debian.org/debian bullseye/main amd64 xdg-utils all 1.1.3-2 [74.6 kB] Get:90 http://deb.debian.org/debian bullseye/main amd64 r-base-core amd64 4.0.1-1 [25.0 MB] Get:91 http://deb.debian.org/debian bullseye/main amd64 r-cran-littler amd64 0.3.10-1 [313 kB] Get:92 http://deb.debian.org/debian bullseye/main amd64 littler all 0.3.10-1 [14.9 kB] Get:93 http://deb.debian.org/debian bullseye/main amd64 r-cran-assertthat all 0.2.1-2 [56.5 kB] Get:94 http://deb.debian.org/debian bullseye/main amd64 r-cran-backports amd64 1.1.7-1 [72.0 kB] Get:95 http://deb.debian.org/debian bullseye/main amd64 r-cran-bh all 1.66.0-1 [5072 B] Get:96 http://deb.debian.org/debian bullseye/main amd64 r-cran-ps amd64 1.3.3-1+b1 [215 kB] Get:97 http://deb.debian.org/debian bullseye/main amd64 r-cran-r6 all 2.4.1-2 [79.2 kB] Get:98 http://deb.debian.org/debian bullseye/main amd64 r-cran-processx amd64 3.4.2-1+b1 [269 kB] Get:99 http://deb.debian.org/debian bullseye/main amd64 r-cran-callr all 3.4.3-2 [388 kB] Get:100 http://deb.debian.org/debian bullseye/main amd64 r-cran-crayon all 1.3.4-5 [750 kB] Get:101 http://deb.debian.org/debian bullseye/main amd64 r-cran-glue amd64 1.4.1-1 [137 kB] Get:102 http://deb.debian.org/debian bullseye/main amd64 r-cran-fansi amd64 0.4.1-1+b1 [345 kB] Get:103 http://deb.debian.org/debian bullseye/main amd64 r-cran-cli all 2.0.2-2 [392 kB] Get:104 http://deb.debian.org/debian bullseye/main amd64 r-cran-colorspace amd64 1.4-1+dfsg-1+b1 [1636 kB] Get:105 http://deb.debian.org/debian bullseye/main amd64 r-cran-data.table amd64 1.12.8+dfsg-2 [1600 kB] Get:106 http://deb.debian.org/debian bullseye/main amd64 r-cran-rprojroot all 1.3-2-3 [97.5 kB] Get:107 http://deb.debian.org/debian bullseye/main amd64 r-cran-desc all 1.2.0-3 [301 kB] Get:108 http://deb.debian.org/debian bullseye/main amd64 r-cran-digest amd64 0.6.25-1+b1 [179 kB] Get:109 http://deb.debian.org/debian bullseye/main amd64 r-cran-rlang amd64 0.4.6-1+b1 [1117 kB] Get:110 http://deb.debian.org/debian bullseye/main amd64 r-cran-ellipsis amd64 0.3.1-1 [31.7 kB] Get:111 http://deb.debian.org/debian bullseye/main amd64 r-cran-magrittr all 1.5-6 [154 kB] Get:112 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get:113 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgkitten all 0.1.5-2 [23.7 kB] Get:114 http://deb.debian.org/debian bullseye/main amd64 r-cran-rcpp amd64 1.0.4.6-1+b1 [1951 kB] Get:115 http://deb.debian.org/debian bullseye/main amd64 r-cran-lifecycle all 0.2.0-2 [93.2 kB] Get:116 http://deb.debian.org/debian bullseye/main amd64 r-cran-utf8 amd64 1.1.4-1+b2 [130 kB] Get:117 http://deb.debian.org/debian bullseye/main amd64 r-cran-vctrs amd64 0.3.0-2 [974 kB] Get:118 http://deb.debian.org/debian bullseye/main amd64 r-cran-pillar all 1.4.4-2 [230 kB] Get:119 http://deb.debian.org/debian bullseye/main amd64 r-cran-tibble amd64 3.0.1-1+b1 [422 kB] Get:120 http://deb.debian.org/debian bullseye/main amd64 r-cran-purrr amd64 0.3.4-1+b1 [398 kB] Get:121 http://deb.debian.org/debian bullseye/main amd64 r-cran-tidyselect amd64 1.1.0+dfsg-1 [192 kB] Get:122 http://deb.debian.org/debian bullseye/main amd64 r-cran-plogr all 0.2.0-3 [14.9 kB] Get:123 http://deb.debian.org/debian bullseye/main amd64 r-cran-dplyr amd64 0.8.5-1+b1 [1884 kB] Get:124 http://deb.debian.org/debian bullseye/main amd64 r-cran-evaluate all 0.14-2 [81.1 kB] Get:125 http://deb.debian.org/debian bullseye/main amd64 r-cran-farver amd64 2.0.3-1+b1 [1393 kB] Get:126 http://deb.debian.org/debian bullseye/main amd64 r-cran-gtable all 0.3.0+dfsg-2 [163 kB] Get:127 http://deb.debian.org/debian bullseye/main amd64 r-cran-prettyunits all 1.1.1-2 [39.1 kB] Get:128 http://deb.debian.org/debian bullseye/main amd64 r-cran-withr all 2.2.0-2 [209 kB] Get:129 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgbuild all 1.0.8-2 [140 kB] Get:130 http://deb.debian.org/debian bullseye/main amd64 r-cran-rstudioapi all 0.11-2 [249 kB] Get:131 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgload amd64 1.1.0-1 [168 kB] Get:132 http://deb.debian.org/debian bullseye/main amd64 r-cran-praise all 1.0.0-4 [20.1 kB] Get:133 http://deb.debian.org/debian bullseye/main amd64 r-cran-testthat amd64 2.3.2-2+b1 [1069 kB] Get:134 http://deb.debian.org/debian bullseye/main amd64 r-cran-isoband amd64 0.2.1-1+b1 [2491 kB] Get:135 http://deb.debian.org/debian bullseye/main amd64 r-cran-mass amd64 7.3-51.6-1+b1 [1110 kB] Get:136 http://deb.debian.org/debian bullseye/main amd64 r-cran-lattice amd64 0.20-41-1+b1 [1164 kB] Get:137 http://deb.debian.org/debian bullseye/main amd64 r-cran-nlme amd64 3.1.148-1 [2211 kB] Get:138 http://deb.debian.org/debian bullseye/main amd64 r-cran-matrix amd64 1.2-18-1+b1 [3487 kB] Get:139 http://deb.debian.org/debian bullseye/main amd64 r-cran-mgcv amd64 1.8-31-1+b1 [2756 kB] Get:140 http://deb.debian.org/debian bullseye/main amd64 r-cran-labeling all 0.3-4 [62.2 kB] Get:141 http://deb.debian.org/debian bullseye/main amd64 r-cran-munsell all 0.5.0-2 [236 kB] Get:142 http://deb.debian.org/debian bullseye/main amd64 r-cran-rcolorbrewer all 1.1-2-3 [54.4 kB] Get:143 http://deb.debian.org/debian bullseye/main amd64 r-cran-viridislite all 0.3.0-4 [59.2 kB] Get:144 http://deb.debian.org/debian bullseye/main amd64 r-cran-scales all 1.1.1-1 [557 kB] Get:145 http://deb.debian.org/debian bullseye/main amd64 r-cran-ggplot2 all 3.3.1+dfsg-1 [3094 kB] Get:146 http://deb.debian.org/debian bullseye/main amd64 r-cran-gridextra all 2.3-3 [1024 kB] Get:147 http://deb.debian.org/debian bullseye/main amd64 r-cran-igraph amd64 1.2.5-1+b1 [3495 kB] Get:148 http://deb.debian.org/debian bullseye/main amd64 r-cran-plyr amd64 1.8.6-2 [830 kB] Get:149 http://deb.debian.org/debian bullseye/main amd64 r-cran-stringi amd64 1.4.6-1+b2 [713 kB] Get:150 http://deb.debian.org/debian bullseye/main amd64 r-cran-stringr all 1.4.0-2 [199 kB] Get:151 http://deb.debian.org/debian bullseye/main amd64 r-cran-reshape2 amd64 1.4.4-2 [114 kB] Get:152 http://deb.debian.org/debian bullseye/main amd64 r-cran-stringdist amd64 0.9.5.5-1+b1 [535 kB] Get:153 http://deb.debian.org/debian bullseye/main amd64 r-cran-tcr amd64 2.2.4.1-1+b1 [3259 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 119 MB in 2s (72.6 MB/s) Selecting previously unselected package readline-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6517 files and directories currently installed.) Preparing to unpack .../000-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../001-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package ucf. Preparing to unpack .../003-ucf_3.0042_all.deb ... Moving old data out of the way Unpacking ucf (3.0042) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../004-libssl1.1_1.1.1g-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1g-1) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_1.1.1g-1_amd64.deb ... Unpacking openssl (1.1.1g-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20200601_all.deb ... Unpacking ca-certificates (20200601) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../007-libexpat1_2.2.9-1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.9-1) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../008-libpng16-16_1.6.37-2_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.37-2) ... 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Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../033-libpixman-1-0_0.36.0-1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.36.0-1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../034-libxau6_1%3a1.0.8-1+b2_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.8-1+b2) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../035-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../036-libxcb1_1.14-2_amd64.deb ... Unpacking libxcb1:amd64 (1.14-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../037-libx11-data_2%3a1.6.9-2_all.deb ... Unpacking libx11-data (2:1.6.9-2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../038-libx11-6_2%3a1.6.9-2+b1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.6.9-2+b1) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../039-libxcb-render0_1.14-2_amd64.deb ... Unpacking libxcb-render0:amd64 (1.14-2) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../040-libxcb-shm0_1.14-2_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.14-2) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../041-libxext6_2%3a1.3.3-1+b2_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.3-1+b2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../042-libxrender1_1%3a0.9.10-1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../043-libcairo2_1.16.0-4_amd64.deb ... Unpacking libcairo2:amd64 (1.16.0-4) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../044-libkrb5support0_1.17-10_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-10) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../045-libk5crypto3_1.17-10_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-10) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../046-libkeyutils1_1.6.1-2_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.1-2) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../047-libkrb5-3_1.17-10_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-10) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../048-libgssapi-krb5-2_1.17-10_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-10) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../049-libsasl2-modules-db_2.1.27+dfsg-2_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Selecting previously unselected package libsasl2-2:amd64. 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Setting up libgomp1:amd64 (10.1.0-3) ... Setting up libldap-common (2.4.50+dfsg-1) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libkrb5support0:amd64 (1.17-10) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Setting up libasan5:amd64 (9.3.0-13) ... Setting up zip (3.0-11+b1) ... Setting up libblas3:amd64 (3.9.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Setting up libx11-data (2:1.6.9-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libfribidi0:amd64 (1.0.8-2) ... Setting up libquadmath0:amd64 (10.1.0-3) ... Setting up libpng16-16:amd64 (1.6.37-2) ... Setting up libatomic1:amd64 (10.1.0-3) ... Setting up libtcl8.6:amd64 (8.6.10+dfsg-1) ... Setting up libwebp6:amd64 (0.6.1-2+b1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libk5crypto3:amd64 (1.17-10) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2) ... Setting up libgfortran5:amd64 (10.1.0-3) ... Setting up libubsan1:amd64 (10.1.0-3) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libthai-data (0.1.28-3) ... Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up libkrb5-3:amd64 (1.17-10) ... Setting up libtiff5:amd64 (4.1.0+git191117-2) ... Setting up libc-dev-bin (2.30-8) ... Setting up openssl (1.1.1g-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up readline-common (8.0-4) ... Setting up libxml2:amd64 (2.9.10+dfsg-5+b1) ... Setting up xdg-utils (1.1.3-2) ... Setting up liblsan0:amd64 (10.1.0-3) ... Setting up libitm1:amd64 (10.1.0-3) ... Setting up libtsan0:amd64 (10.1.0-3) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up liblapack3:amd64 (3.9.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.14-2) ... Setting up libxcb-render0:amd64 (1.14-2) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libldap-2.4-2:amd64 (2.4.50+dfsg-1) ... Setting up libxcb-shm0:amd64 (1.14-2) ... Setting up libgcc-9-dev:amd64 (9.3.0-13) ... Setting up libthai0:amd64 (0.1.28-3) ... Setting up ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 126 added, 0 removed; done. Setting up libfreetype6:amd64 (2.10.1-2) ... Setting up libgssapi-krb5-2:amd64 (1.17-10) ... Setting up ucf (3.0042) ... Setting up libcurl4:amd64 (7.68.0-1) ... Setting up libc6-dev:amd64 (2.30-8) ... Setting up libx11-6:amd64 (2:1.6.9-2+b1) ... Setting up libharfbuzz0b:amd64 (2.6.4-1+b1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libpaper1:amd64 (1.1.28+b1) ... Creating config file /etc/papersize with new version Setting up libstdc++-9-dev:amd64 (9.3.0-13) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up libboost1.71-dev:amd64 (1.71.0-6+b2) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libpaper-utils (1.1.28+b1) ... Setting up libxt6:amd64 (1:1.1.5-1+b3) ... Setting up libboost-dev:amd64 (1.71.0.3) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libfontconfig1:amd64 (2.13.1-4.2) ... Setting up r-cran-bh (1.66.0-1) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.2-2) ... Setting up libtk8.6:amd64 (8.6.10-1) ... Setting up libpango-1.0-0:amd64 (1.44.7-4) ... Setting up libcairo2:amd64 (1.16.0-4) ... Setting up libpangoft2-1.0-0:amd64 (1.44.7-4) ... Setting up libpangocairo-1.0-0:amd64 (1.44.7-4) ... Setting up r-base-core (4.0.1-1) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.3.4-5) ... Setting up r-cran-gtable (0.3.0+dfsg-2) ... Setting up r-cran-labeling (0.3-4) ... Setting up r-cran-lattice (0.20-41-1+b1) ... Setting up r-cran-ps (1.3.3-1+b1) ... Setting up r-cran-nlme (3.1.148-1) ... Setting up r-cran-farver (2.0.3-1+b1) ... Setting up r-cran-viridislite (0.3.0-4) ... Setting up r-cran-r6 (2.4.1-2) ... Setting up r-cran-pkgkitten (0.1.5-2) ... Setting up r-cran-magrittr (1.5-6) ... Setting up r-cran-littler (0.3.10-1) ... Setting up r-cran-rcpp (1.0.4.6-1+b1) ... Setting up r-cran-rlang (0.4.6-1+b1) ... Setting up r-cran-assertthat (0.2.1-2) ... Setting up littler (0.3.10-1) ... Setting up r-cran-plogr (0.2.0-3) ... Setting up r-cran-withr (2.2.0-2) ... Setting up r-cran-backports (1.1.7-1) ... Setting up r-cran-processx (3.4.2-1+b1) ... Setting up r-cran-praise (1.0.0-4) ... Setting up r-cran-digest (0.6.25-1+b1) ... Setting up r-cran-evaluate (0.14-2) ... Setting up r-cran-prettyunits (1.1.1-2) ... Setting up r-cran-fansi (0.4.1-1+b1) ... Setting up r-cran-mass (7.3-51.6-1+b1) ... Setting up r-cran-data.table (1.12.8+dfsg-2) ... Setting up r-cran-glue (1.4.1-1) ... Setting up r-cran-cli (2.0.2-2) ... Setting up r-cran-lifecycle (0.2.0-2) ... Setting up r-cran-rprojroot (1.3-2-3) ... Setting up r-cran-rstudioapi (0.11-2) ... Setting up r-cran-pkgconfig (2.0.3-2) ... Setting up r-cran-utf8 (1.1.4-1+b2) ... Setting up r-cran-colorspace (1.4-1+dfsg-1+b1) ... Setting up r-cran-stringi (1.4.6-1+b2) ... Setting up r-cran-stringdist (0.9.5.5-1+b1) ... Setting up r-cran-plyr (1.8.6-2) ... Setting up r-cran-rcolorbrewer (1.1-2-3) ... Setting up r-cran-gridextra (2.3-3) ... Setting up r-cran-purrr (0.3.4-1+b1) ... Setting up r-cran-matrix (1.2-18-1+b1) ... Setting up r-cran-mgcv (1.8-31-1+b1) ... Setting up r-cran-ellipsis (0.3.1-1) ... Setting up r-cran-stringr (1.4.0-2) ... Setting up r-cran-callr (3.4.3-2) ... Setting up r-cran-desc (1.2.0-3) ... Setting up r-cran-munsell (0.5.0-2) ... Setting up r-cran-igraph (1.2.5-1+b1) ... Setting up r-cran-reshape2 (1.4.4-2) ... Setting up r-cran-scales (1.1.1-1) ... Setting up r-cran-pkgbuild (1.0.8-2) ... Setting up r-cran-vctrs (0.3.0-2) ... Setting up r-cran-pillar (1.4.4-2) ... Setting up r-cran-pkgload (1.1.0-1) ... Setting up r-cran-tibble (3.0.1-1+b1) ... Setting up r-cran-tidyselect (1.1.0+dfsg-1) ... Setting up r-cran-testthat (2.3.2-2+b1) ... Setting up r-cran-isoband (0.2.1-1+b1) ... Setting up r-cran-dplyr (0.8.5-1+b1) ... Setting up r-cran-ggplot2 (3.3.1+dfsg-1) ... Setting up r-cran-tcr (2.2.4.1-1+b1) ... Processing triggers for libc-bin (2.30-8) ... Processing triggers for ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-y', 'install', 'r-cran-tcr'] 0m31.1s INFO: Running scripts post_install 0m31.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_install_exceptions'] 0m31.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_install_exceptions'] 0m31.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m32.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m32.2s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpifqpkm5v to sid 0m32.2s DEBUG: sources.list: deb http://deb.debian.org/debian/ sid main 0m32.2s INFO: Running scripts pre_distupgrade 0m32.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m32.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m32.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_exceptions'] 0m32.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_exceptions'] 0m32.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m32.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m32.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m32.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m32.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m32.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m32.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', 'update'] 0m35.6s DUMP: Get:1 http://deb.debian.org/debian sid InRelease [146 kB] Get:2 http://deb.debian.org/debian sid/main amd64 Packages [8237 kB] Get:3 http://deb.debian.org/debian sid/main Translation-en [6198 kB] Fetched 14.6 MB in 3s (5075 kB/s) Reading package lists... 0m35.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', 'update'] 0m35.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-yf', 'dist-upgrade'] 0m38.6s DUMP: Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libasan5 libatomic1 libboost-dev libboost1.71-dev libc-dev-bin libc6-dev libcrypt-dev libgcc-9-dev libitm1 liblsan0 libstdc++-9-dev libtsan0 libubsan1 linux-libc-dev r-cran-bh r-cran-plogr Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: r-cran-generics The following packages will be upgraded: debianutils gcc-10-base libatomic1 libgcc-s1 libgfortran5 libgmp10 libgomp1 libharfbuzz0b libitm1 liblsan0 libquadmath0 libstdc++6 libtsan0 libubsan1 linux-libc-dev r-cran-dplyr r-cran-tcr ucf 18 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 8482 kB of archives. After this operation, 4830 kB disk space will be freed. Get:1 http://deb.debian.org/debian sid/main amd64 debianutils amd64 4.11 [101 kB] Get:2 http://deb.debian.org/debian sid/main amd64 libatomic1 amd64 10.1.0-4 [9000 B] Get:3 http://deb.debian.org/debian sid/main amd64 libubsan1 amd64 10.1.0-4 [134 kB] Get:4 http://deb.debian.org/debian sid/main amd64 libtsan0 amd64 10.1.0-4 [313 kB] Get:5 http://deb.debian.org/debian sid/main amd64 gcc-10-base amd64 10.1.0-4 [197 kB] Get:6 http://deb.debian.org/debian sid/main amd64 libstdc++6 amd64 10.1.0-4 [492 kB] Get:7 http://deb.debian.org/debian sid/main amd64 libquadmath0 amd64 10.1.0-4 [145 kB] Get:8 http://deb.debian.org/debian sid/main amd64 liblsan0 amd64 10.1.0-4 [141 kB] Get:9 http://deb.debian.org/debian sid/main amd64 libitm1 amd64 10.1.0-4 [25.8 kB] Get:10 http://deb.debian.org/debian sid/main amd64 libgomp1 amd64 10.1.0-4 [99.2 kB] Get:11 http://deb.debian.org/debian sid/main amd64 libgfortran5 amd64 10.1.0-4 [728 kB] Get:12 http://deb.debian.org/debian sid/main amd64 libgcc-s1 amd64 10.1.0-4 [41.2 kB] Get:13 http://deb.debian.org/debian sid/main amd64 libgmp10 amd64 2:6.2.0+dfsg-6 [253 kB] Get:14 http://deb.debian.org/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:15 http://deb.debian.org/debian sid/main amd64 libharfbuzz0b amd64 2.6.7-1 [1467 kB] Get:16 http://deb.debian.org/debian sid/main amd64 linux-libc-dev amd64 5.6.14-2 [1114 kB] Get:17 http://deb.debian.org/debian sid/main amd64 r-cran-generics all 0.0.2-3 [66.2 kB] Get:18 http://deb.debian.org/debian sid/main amd64 r-cran-dplyr amd64 1.0.0-1 [1122 kB] Get:19 http://deb.debian.org/debian sid/main amd64 r-cran-tcr amd64 2.3.2+ds-1 [1959 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 8482 kB in 0s (18.2 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 33257 files and directories currently installed.) Preparing to unpack .../debianutils_4.11_amd64.deb ... Unpacking debianutils (4.11) over (4.9.1) ... Setting up debianutils (4.11) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 33257 files and directories currently installed.) Preparing to unpack .../libatomic1_10.1.0-4_amd64.deb ... Unpacking libatomic1:amd64 (10.1.0-4) over (10.1.0-3) ... Preparing to unpack .../libubsan1_10.1.0-4_amd64.deb ... Unpacking libubsan1:amd64 (10.1.0-4) over (10.1.0-3) ... Preparing to unpack .../libtsan0_10.1.0-4_amd64.deb ... Unpacking libtsan0:amd64 (10.1.0-4) over (10.1.0-3) ... Preparing to unpack .../gcc-10-base_10.1.0-4_amd64.deb ... Unpacking gcc-10-base:amd64 (10.1.0-4) over (10.1.0-3) ... Setting up gcc-10-base:amd64 (10.1.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 33257 files and directories currently installed.) Preparing to unpack .../libstdc++6_10.1.0-4_amd64.deb ... Unpacking libstdc++6:amd64 (10.1.0-4) over (10.1.0-3) ... Setting up libstdc++6:amd64 (10.1.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 33257 files and directories currently installed.) Preparing to unpack .../0-libquadmath0_10.1.0-4_amd64.deb ... Unpacking libquadmath0:amd64 (10.1.0-4) over (10.1.0-3) ... Preparing to unpack .../1-liblsan0_10.1.0-4_amd64.deb ... Unpacking liblsan0:amd64 (10.1.0-4) over (10.1.0-3) ... Preparing to unpack .../2-libitm1_10.1.0-4_amd64.deb ... Unpacking libitm1:amd64 (10.1.0-4) over (10.1.0-3) ... Preparing to unpack .../3-libgomp1_10.1.0-4_amd64.deb ... Unpacking libgomp1:amd64 (10.1.0-4) over (10.1.0-3) ... Preparing to unpack .../4-libgfortran5_10.1.0-4_amd64.deb ... Unpacking libgfortran5:amd64 (10.1.0-4) over (10.1.0-3) ... Preparing to unpack .../5-libgcc-s1_10.1.0-4_amd64.deb ... Unpacking libgcc-s1:amd64 (10.1.0-4) over (10.1.0-3) ... Setting up libgcc-s1:amd64 (10.1.0-4) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 33257 files and directories currently installed.) Preparing to unpack .../libgmp10_2%3a6.2.0+dfsg-6_amd64.deb ... Unpacking libgmp10:amd64 (2:6.2.0+dfsg-6) over (2:6.2.0+dfsg-4) ... Setting up libgmp10:amd64 (2:6.2.0+dfsg-6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 33257 files and directories currently installed.) Preparing to unpack .../0-ucf_3.0043_all.deb ... Unpacking ucf (3.0043) over (3.0042) ... Preparing to unpack .../1-libharfbuzz0b_2.6.7-1_amd64.deb ... Unpacking libharfbuzz0b:amd64 (2.6.7-1) over (2.6.4-1+b1) ... Preparing to unpack .../2-linux-libc-dev_5.6.14-2_amd64.deb ... Unpacking linux-libc-dev:amd64 (5.6.14-2) over (5.6.14-1) ... Selecting previously unselected package r-cran-generics. Preparing to unpack .../3-r-cran-generics_0.0.2-3_all.deb ... Unpacking r-cran-generics (0.0.2-3) ... Preparing to unpack .../4-r-cran-dplyr_1.0.0-1_amd64.deb ... Unpacking r-cran-dplyr (1.0.0-1) over (0.8.5-1+b1) ... Preparing to unpack .../5-r-cran-tcr_2.3.2+ds-1_amd64.deb ... Unpacking r-cran-tcr (2.3.2+ds-1) over (2.2.4.1-1+b1) ... Setting up r-cran-generics (0.0.2-3) ... Setting up linux-libc-dev:amd64 (5.6.14-2) ... Setting up libgomp1:amd64 (10.1.0-4) ... Setting up libquadmath0:amd64 (10.1.0-4) ... Setting up libatomic1:amd64 (10.1.0-4) ... Setting up ucf (3.0043) ... Setting up libgfortran5:amd64 (10.1.0-4) ... Setting up libubsan1:amd64 (10.1.0-4) ... Setting up libharfbuzz0b:amd64 (2.6.7-1) ... Setting up r-cran-dplyr (1.0.0-1) ... Setting up liblsan0:amd64 (10.1.0-4) ... Setting up libitm1:amd64 (10.1.0-4) ... Setting up libtsan0:amd64 (10.1.0-4) ... Setting up r-cran-tcr (2.3.2+ds-1) ... Processing triggers for libc-bin (2.30-8) ... 0m38.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-yf', 'dist-upgrade'] 0m38.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m38.9s DUMP: 9cd4dae459b4af864303eed8bb7b2682 - 0m38.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m38.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'show', '--no-all-versions', 'r-cran-tcr'] 0m39.1s DUMP: Package: r-cran-tcr Version: 2.3.2+ds-1 Installed-Size: 2114 Maintainer: Debian R Packages Maintainers Architecture: amd64 Depends: r-base-core (>= 4.0.1-1), r-api-4.0, r-cran-ggplot2 (>= 1.0.0), r-cran-dplyr (>= 0.4.0), r-cran-gridextra (>= 0.9.0), r-cran-reshape2 (>= 1.2.0), r-cran-igraph (>= 0.7.1), r-cran-rcpp (>= 0.11.1), r-cran-data.table (>= 1.9.0), r-cran-gtable (>= 0.1.2), r-cran-stringdist (>= 0.7.3), r-cran-scales (>= 0.3.0), libc6 (>= 2.14), libgcc-s1 (>= 3.0), libstdc++6 (>= 5.2) Suggests: r-cran-knitr (>= 1.8), r-cran-roxygen2 (>= 3.0.0), r-cran-rmarkdown (>= 1.0) Description-en: Advanced Data Analysis of Immune Receptor Repertoires Cells of the immune system are the grand exception to the rule that all cells of an individuum have (mostly exact) copies of the same DNA. B cells (which produce antibodies) and T cells (which communicate with cells) however have a section of their DNA with genes of the groups V, D and J that are reorganised within the genomic DNA to provide the flexibility to deal with yet unknown pathogens. . This package provides a platform for the advanced analysis of T cell receptor repertoire data and its visualisations. . Caveat: This package is soon to be replaced by http://github.com/immunomind/immunarch which is not yet available as a Debian package. Description-md5: dba357117d8ee7f46c5702d38e5efd55 Homepage: https://cran.r-project.org/package=tcR Section: gnu-r Priority: optional Filename: pool/main/r/r-cran-tcr/r-cran-tcr_2.3.2+ds-1_amd64.deb Size: 1958992 MD5sum: 6a6b9ab872c2658e622608526f34dfae SHA256: b416893c777e283187566c23555f566038746512e07ae1db2678a44f124af2c6 0m39.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'show', '--no-all-versions', 'r-cran-tcr'] 0m39.1s INFO: apt-cache knows about the following packages: r-cran-tcr 0m39.1s INFO: Running scripts pre_install 0m39.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_database-server'] 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_database-server'] 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_exceptions'] 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_exceptions'] 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_extras'] 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_extras'] 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture'] 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture'] 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy'] 0m39.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy'] 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy', 'r-cran-tcr'] 0m39.3s DUMP: r-cran-tcr: Installed: 2.3.2+ds-1 Candidate: 2.3.2+ds-1 Version table: *** 2.3.2+ds-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m39.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy', 'r-cran-tcr'] 0m39.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-y', 'install', 'r-cran-tcr'] 0m39.8s DUMP: Reading package lists... Building dependency tree... Reading state information... r-cran-tcr is already the newest version (2.3.2+ds-1). The following packages were automatically installed and are no longer required: libasan5 libatomic1 libboost-dev libboost1.71-dev libc-dev-bin libc6-dev libcrypt-dev libgcc-9-dev libitm1 liblsan0 libstdc++-9-dev libtsan0 libubsan1 linux-libc-dev r-cran-bh r-cran-plogr Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m39.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-y', 'install', 'r-cran-tcr'] 0m39.8s INFO: Running scripts post_install 0m39.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_install_exceptions'] 0m39.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_install_exceptions'] 0m39.8s INFO: Running scripts post_distupgrade 0m39.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m39.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m39.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_exceptions'] 0m39.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_exceptions'] 0m39.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m39.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m39.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m39.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m39.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_zz_backports'] 0m39.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_distupgrade_zz_backports'] 0m39.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m41.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m41.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m42.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m42.5s INFO: Running scripts pre_install 0m42.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_database-server'] 0m42.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_database-server'] 0m42.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_exceptions'] 0m42.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_exceptions'] 0m42.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_extras'] 0m42.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_extras'] 0m42.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture'] 0m42.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture'] 0m42.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m42.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m42.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy'] 0m42.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian sid/main amd64 Packages release o=Debian,a=unstable,n=sid,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy'] 0m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy', 'r-cran-tcr'] 0m42.6s DUMP: r-cran-tcr: Installed: 2.3.2+ds-1 Candidate: 2.3.2+ds-1 Version table: *** 2.3.2+ds-1 500 500 http://deb.debian.org/debian sid/main amd64 Packages 100 /var/lib/dpkg/status 0m42.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-cache', 'policy', 'r-cran-tcr'] 0m42.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-y', 'install', 'r-cran-tcr=2.3.2+ds-1'] 0m42.9s DUMP: Reading package lists... Building dependency tree... Reading state information... r-cran-tcr is already the newest version (2.3.2+ds-1). The following packages were automatically installed and are no longer required: libasan5 libatomic1 libboost-dev libboost1.71-dev libc-dev-bin libc6-dev libcrypt-dev libgcc-9-dev libitm1 liblsan0 libstdc++-9-dev libtsan0 libubsan1 linux-libc-dev r-cran-bh r-cran-plogr Use 'sudo apt autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m42.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', '-y', 'install', 'r-cran-tcr=2.3.2+ds-1'] 0m42.9s INFO: Running scripts post_install 0m42.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_install_exceptions'] 0m42.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_install_exceptions'] 0m42.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m43.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m46.0s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', '-ac', '--ignore-obsolete'] 0m48.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', '-ac', '--ignore-obsolete'] 0m48.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m48.1s DUMP: 0.15.2 0m48.1s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m48.1s INFO: Running adequate version 0.15.2 now. 0m48.1s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'r-cran-tcr'] 0m48.2s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'r-cran-tcr'] 0m48.2s INFO: Running scripts pre_remove 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m48.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m48.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m48.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m50.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m50.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m50.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m50.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m50.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m50.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_exceptions'] 0m50.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/pre_remove_exceptions'] 0m50.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m50.7s DUMP: install ok installed adduser adduser 3.118 install ok installed apt apt 2.1.6 install ok installed base-files base-files 11 install ok installed base-passwd base-passwd 3.5.47 install ok installed bash bash 5.0-6 install ok installed bsdutils bsdutils 1:2.35.2-2 install ok installed ca-certificates ca-certificates 20200601 install ok installed coreutils coreutils 8.30-3+b1 install ok installed dash dash 0.5.10.2-7 install ok installed debconf debconf 1.5.74 install ok installed debian-archive-keyring debian-archive-keyring 2019.1 install ok installed debianutils debianutils 4.11 install ok installed diffutils diffutils 1:3.7-3 install ok installed dpkg dpkg 1.19.7 install ok installed e2fsprogs e2fsprogs 1.45.6-1 install ok installed findutils findutils 4.7.0-1 install ok installed fontconfig fontconfig 2.13.1-4.2 install ok installed fontconfig-config fontconfig-config 2.13.1-4.2 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-2 install ok installed gcc-10-base:amd64 gcc-10-base 10.1.0-4 install ok installed gcc-9-base:amd64 gcc-9-base 9.3.0-13 install ok installed gpgv gpgv 2.2.20-1 install ok installed grep grep 3.4-1 install ok installed gzip gzip 1.10-2 install ok installed hostname hostname 3.23 install ok installed init-system-helpers init-system-helpers 1.57 install ok installed libacl1:amd64 libacl1 2.2.53-8 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.1.6 install ok installed libasan5:amd64 libasan5 9.3.0-13 install ok installed libatomic1:amd64 libatomic1 10.1.0-4 install ok installed libattr1:amd64 libattr1 1:2.4.48-5 install ok installed libaudit-common libaudit-common 1:2.8.5-3 install ok installed libaudit1:amd64 libaudit1 1:2.8.5-3+b1 install ok installed libblas3:amd64 libblas3 3.9.0-2 install ok installed libblkid1:amd64 libblkid1 2.35.2-2 install ok installed libboost-dev:amd64 libboost-dev 1.71.0.3 install ok installed libboost1.71-dev:amd64 libboost1.71-dev 1.71.0-6+b2 install ok installed libbrotli1:amd64 libbrotli1 1.0.7-6.1 install ok installed libbsd0:amd64 libbsd0 0.10.0-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-3 install ok installed libc-bin libc-bin 2.30-8 install ok installed libc-dev-bin libc-dev-bin 2.30-8 install ok installed libc6:amd64 libc6 2.30-8 install ok installed libc6-dev:amd64 libc6-dev 2.30-8 install ok installed libcairo2:amd64 libcairo2 1.16.0-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.9-2.2 install ok installed libcom-err2:amd64 libcom-err2 1.45.6-1 install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.16-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.16-1 install ok installed libcurl4:amd64 libcurl4 7.68.0-1 install ok installed libdatrie1:amd64 libdatrie1 0.2.12-3 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg1-0.6 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.252 install ok installed libexpat1:amd64 libexpat1 2.2.9-1 install ok installed libext2fs2:amd64 libext2fs2 1.45.6-1 install ok installed libffi7:amd64 libffi7 3.3-4 install ok installed libfontconfig1:amd64 libfontconfig1 2.13.1-4.2 install ok installed libfreetype6:amd64 libfreetype6 2.10.1-2 install ok installed libfribidi0:amd64 libfribidi0 1.0.8-2 install ok installed libgcc-9-dev:amd64 libgcc-9-dev 9.3.0-13 install ok installed libgcc-s1:amd64 libgcc-s1 10.1.0-4 install ok installed libgcrypt20:amd64 libgcrypt20 1.8.5-5 install ok installed libgfortran5:amd64 libgfortran5 10.1.0-4 install ok installed libglib2.0-0:amd64 libglib2.0-0 2.64.3-1 install ok installed libgmp10:amd64 libgmp10 2:6.2.0+dfsg-6 install ok installed libgnutls30:amd64 libgnutls30 3.6.14-2 install ok installed libgomp1:amd64 libgomp1 10.1.0-4 install ok installed libgpg-error0:amd64 libgpg-error0 1.38-1 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-1 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.17-10 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 2.6.7-1 install ok installed libhogweed5:amd64 libhogweed5 3.5.1+really3.5.1-2 install ok installed libice6:amd64 libice6 2:1.0.9-2 install ok installed libicu67:amd64 libicu67 67.1-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.0-1 install ok installed libitm1:amd64 libitm1 10.1.0-4 install ok installed libjbig0:amd64 libjbig0 2.1-3.1+b2 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:1.5.2-2+b1 install ok installed libk5crypto3:amd64 libk5crypto3 1.17-10 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.1-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.17-10 install ok installed libkrb5support0:amd64 libkrb5support0 1.17-10 install ok installed liblapack3:amd64 liblapack3 3.9.0-2 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.50+dfsg-1 install ok installed libldap-common libldap-common 2.4.50+dfsg-1 install ok installed liblsan0:amd64 liblsan0 10.1.0-4 install ok installed liblz4-1:amd64 liblz4-1 1.9.2-2 install ok installed liblzma5:amd64 liblzma5 5.2.4-1+b1 install ok installed libmount1:amd64 libmount1 2.35.2-2 install ok installed libnettle7:amd64 libnettle7 3.5.1+really3.5.1-2 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.41.0-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.23.20-1 install ok installed libpam-modules:amd64 libpam-modules 1.3.1-5 install ok installed libpam-modules-bin libpam-modules-bin 1.3.1-5 install ok installed libpam-runtime libpam-runtime 1.3.1-5 install ok installed libpam0g:amd64 libpam0g 1.3.1-5 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.44.7-4 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.44.7-4 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.44.7-4 install ok installed libpaper-utils libpaper-utils 1.1.28+b1 install ok installed libpaper1:amd64 libpaper1 1.1.28+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.34-7 install ok installed libpcre3:amd64 libpcre3 2:8.39-12+b1 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.36.0-1 install ok installed libpng16-16:amd64 libpng16-16 1.6.37-2 install ok installed libpsl5:amd64 libpsl5 0.21.0-1.1 install ok installed libquadmath0:amd64 libquadmath0 10.1.0-4 install ok installed libreadline8:amd64 libreadline8 8.0-4 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.27+dfsg-2 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.27+dfsg-2 install ok installed libseccomp2:amd64 libseccomp2 2.4.3-1+b1 install ok installed libselinux1:amd64 libselinux1 3.0-1+b3 install ok installed libsemanage-common libsemanage-common 3.0-1 install ok installed libsemanage1:amd64 libsemanage1 3.0-1+b3 install ok installed libsepol1:amd64 libsepol1 3.0-1 install ok installed libsm6:amd64 libsm6 2:1.2.3-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.35.2-2 install ok installed libss2:amd64 libss2 1.45.6-1 install ok installed libssh2-1:amd64 libssh2-1 1.8.0-2.1 install ok installed libssl1.1:amd64 libssl1.1 1.1.1g-1 install ok installed libstdc++-9-dev:amd64 libstdc++-9-dev 9.3.0-13 install ok installed libstdc++6:amd64 libstdc++6 10.1.0-4 install ok installed libsystemd0:amd64 libsystemd0 245.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.16.0-2 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.10+dfsg-1 install ok installed libthai-data libthai-data 0.1.28-3 install ok installed libthai0:amd64 libthai0 0.1.28-3 install ok installed libtiff5:amd64 libtiff5 4.1.0+git191117-2 install ok installed libtinfo6:amd64 libtinfo6 6.2-1 install ok installed libtk8.6:amd64 libtk8.6 8.6.10-1 install ok installed libtsan0:amd64 libtsan0 10.1.0-4 install ok installed libubsan1:amd64 libubsan1 10.1.0-4 install ok installed libudev1:amd64 libudev1 245.6-1 install ok installed libunistring2:amd64 libunistring2 0.9.10-4 install ok installed libuuid1:amd64 libuuid1 2.35.2-2 install ok installed libwebp6:amd64 libwebp6 0.6.1-2+b1 install ok installed libx11-6:amd64 libx11-6 2:1.6.9-2+b1 install ok installed libx11-data libx11-data 2:1.6.9-2 install ok installed libxau6:amd64 libxau6 1:1.0.8-1+b2 install ok installed libxcb-render0:amd64 libxcb-render0 1.14-2 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.14-2 install ok installed libxcb1:amd64 libxcb1 1.14-2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.3-1+b2 install ok installed libxft2:amd64 libxft2 2.3.2-2 install ok installed libxml2:amd64 libxml2 2.9.10+dfsg-5+b1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1 install ok installed libxt6:amd64 libxt6 1:1.1.5-1+b3 install ok installed libzstd1:amd64 libzstd1 1.4.5+dfsg-2 install ok installed linux-libc-dev:amd64 linux-libc-dev 5.6.14-2 install ok installed littler littler 0.3.10-1 install ok installed login login 1:4.8.1-1 install ok installed logsave logsave 1.45.6-1 install ok installed lsb-base lsb-base 11.1.0 install ok installed mawk mawk 1.3.4.20200120-2 install ok installed mount mount 2.35.2-2 install ok installed ncurses-base ncurses-base 6.2-1 install ok installed ncurses-bin ncurses-bin 6.2-1 install ok installed openssl openssl 1.1.1g-1 install ok installed passwd passwd 1:4.8.1-1 install ok installed perl-base perl-base 5.30.3-4 install ok installed r-base-core r-base-core 4.0.1-1 install ok installed r-cran-assertthat r-cran-assertthat 0.2.1-2 install ok installed r-cran-backports r-cran-backports 1.1.7-1 install ok installed r-cran-bh r-cran-bh 1.66.0-1 install ok installed r-cran-callr r-cran-callr 3.4.3-2 install ok installed r-cran-cli r-cran-cli 2.0.2-2 install ok installed r-cran-colorspace r-cran-colorspace 1.4-1+dfsg-1+b1 install ok installed r-cran-crayon r-cran-crayon 1.3.4-5 install ok installed r-cran-data.table r-cran-data.table 1.12.8+dfsg-2 install ok installed r-cran-desc r-cran-desc 1.2.0-3 install ok installed r-cran-digest r-cran-digest 0.6.25-1+b1 install ok installed r-cran-dplyr r-cran-dplyr 1.0.0-1 install ok installed r-cran-ellipsis r-cran-ellipsis 0.3.1-1 install ok installed r-cran-evaluate r-cran-evaluate 0.14-2 install ok installed r-cran-fansi r-cran-fansi 0.4.1-1+b1 install ok installed r-cran-farver r-cran-farver 2.0.3-1+b1 install ok installed r-cran-generics r-cran-generics 0.0.2-3 install ok installed r-cran-ggplot2 r-cran-ggplot2 3.3.1+dfsg-1 install ok installed r-cran-glue r-cran-glue 1.4.1-1 install ok installed r-cran-gridextra r-cran-gridextra 2.3-3 install ok installed r-cran-gtable r-cran-gtable 0.3.0+dfsg-2 install ok installed r-cran-igraph r-cran-igraph 1.2.5-1+b1 install ok installed r-cran-isoband r-cran-isoband 0.2.1-1+b1 install ok installed r-cran-labeling r-cran-labeling 0.3-4 install ok installed r-cran-lattice r-cran-lattice 0.20-41-1+b1 install ok installed r-cran-lifecycle r-cran-lifecycle 0.2.0-2 install ok installed r-cran-littler r-cran-littler 0.3.10-1 install ok installed r-cran-magrittr r-cran-magrittr 1.5-6 install ok installed r-cran-mass r-cran-mass 7.3-51.6-1+b1 install ok installed r-cran-matrix r-cran-matrix 1.2-18-1+b1 install ok installed r-cran-mgcv r-cran-mgcv 1.8-31-1+b1 install ok installed r-cran-munsell r-cran-munsell 0.5.0-2 install ok installed r-cran-nlme r-cran-nlme 3.1.148-1 install ok installed r-cran-pillar r-cran-pillar 1.4.4-2 install ok installed r-cran-pkgbuild r-cran-pkgbuild 1.0.8-2 install ok installed r-cran-pkgconfig r-cran-pkgconfig 2.0.3-2 install ok installed r-cran-pkgkitten r-cran-pkgkitten 0.1.5-2 install ok installed r-cran-pkgload r-cran-pkgload 1.1.0-1 install ok installed r-cran-plogr r-cran-plogr 0.2.0-3 install ok installed r-cran-plyr r-cran-plyr 1.8.6-2 install ok installed r-cran-praise r-cran-praise 1.0.0-4 install ok installed r-cran-prettyunits r-cran-prettyunits 1.1.1-2 install ok installed r-cran-processx r-cran-processx 3.4.2-1+b1 install ok installed r-cran-ps r-cran-ps 1.3.3-1+b1 install ok installed r-cran-purrr r-cran-purrr 0.3.4-1+b1 install ok installed r-cran-r6 r-cran-r6 2.4.1-2 install ok installed r-cran-rcolorbrewer r-cran-rcolorbrewer 1.1-2-3 install ok installed r-cran-rcpp r-cran-rcpp 1.0.4.6-1+b1 install ok installed r-cran-reshape2 r-cran-reshape2 1.4.4-2 install ok installed r-cran-rlang r-cran-rlang 0.4.6-1+b1 install ok installed r-cran-rprojroot r-cran-rprojroot 1.3-2-3 install ok installed r-cran-rstudioapi r-cran-rstudioapi 0.11-2 install ok installed r-cran-scales r-cran-scales 1.1.1-1 install ok installed r-cran-stringdist r-cran-stringdist 0.9.5.5-1+b1 install ok installed r-cran-stringi r-cran-stringi 1.4.6-1+b2 install ok installed r-cran-stringr r-cran-stringr 1.4.0-2 install ok installed r-cran-tcr r-cran-tcr 2.3.2+ds-1 install ok installed r-cran-testthat r-cran-testthat 2.3.2-2+b1 install ok installed r-cran-tibble r-cran-tibble 3.0.1-1+b1 install ok installed r-cran-tidyselect r-cran-tidyselect 1.1.0+dfsg-1 install ok installed r-cran-utf8 r-cran-utf8 1.1.4-1+b2 install ok installed r-cran-vctrs r-cran-vctrs 0.3.0-2 install ok installed r-cran-viridislite r-cran-viridislite 0.3.0-4 install ok installed r-cran-withr r-cran-withr 2.2.0-2 install ok installed readline-common readline-common 8.0-4 install ok installed sed sed 4.7-1 install ok installed sensible-utils sensible-utils 0.0.12+nmu1 install ok installed sysvinit-utils sysvinit-utils 2.96-3 install ok installed tar tar 1.30+dfsg-7 install ok installed tzdata tzdata 2020a-1 install ok installed ucf ucf 3.0043 install ok installed unzip unzip 6.0-25 install ok installed util-linux util-linux 2.35.2-2 install ok installed x11-common x11-common 1:7.7+20 install ok installed xdg-utils xdg-utils 1.1.3-2 install ok installed zip zip 3.0-11+b1 install ok installed zlib1g:amd64 zlib1g 1:1.2.11.dfsg-2 0m50.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m50.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', 'remove', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libasan5:amd64', 'libatomic1:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.71-dev:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcrypt-dev:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-9-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu67:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'liblsan0:amd64', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libstdc++-9-dev:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'littler', 'openssl', 'r-base-core', 'r-cran-assertthat', 'r-cran-backports', 'r-cran-bh', 'r-cran-callr', 'r-cran-cli', 'r-cran-colorspace', 'r-cran-crayon', 'r-cran-data.table', 'r-cran-desc', 'r-cran-digest', 'r-cran-dplyr', 'r-cran-ellipsis', 'r-cran-evaluate', 'r-cran-fansi', 'r-cran-farver', 'r-cran-generics', 'r-cran-ggplot2', 'r-cran-glue', 'r-cran-gridextra', 'r-cran-gtable', 'r-cran-igraph', 'r-cran-isoband', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-pillar', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-pkgload', 'r-cran-plogr', 'r-cran-plyr', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-processx', 'r-cran-ps', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-reshape2', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-stringdist', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-testthat', 'r-cran-tibble', 'r-cran-tidyselect', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-withr', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'r-cran-tcr'] 0m52.3s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: ca-certificates fontconfig fontconfig-config fonts-dejavu-core libasan5 libatomic1 libblas3 libboost-dev libboost1.71-dev libbrotli1 libbsd0 libc-dev-bin libc6-dev libcairo2 libcrypt-dev libcurl4 libdatrie1 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgcc-9-dev libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu67 libitm1 libjbig0 libjpeg62-turbo libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 libldap-2.4-2 libldap-common liblsan0 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpixman-1-0 libpng16-16 libpsl5 libquadmath0 libreadline8 librtmp1 libsasl2-2 libsasl2-modules-db libsm6 libssh2-1 libssl1.1 libstdc++-9-dev libtcl8.6 libthai-data libthai0 libtiff5 libtk8.6 libtsan0 libubsan1 libwebp6 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 linux-libc-dev littler openssl r-base-core r-cran-assertthat r-cran-backports r-cran-bh r-cran-callr r-cran-cli r-cran-colorspace r-cran-crayon r-cran-data.table r-cran-desc r-cran-digest r-cran-dplyr r-cran-ellipsis r-cran-evaluate r-cran-fansi r-cran-farver r-cran-generics r-cran-ggplot2 r-cran-glue r-cran-gridextra r-cran-gtable r-cran-igraph r-cran-isoband r-cran-labeling r-cran-lattice r-cran-lifecycle r-cran-littler r-cran-magrittr r-cran-mass r-cran-matrix r-cran-mgcv r-cran-munsell r-cran-nlme r-cran-pillar r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgkitten r-cran-pkgload r-cran-plogr r-cran-plyr r-cran-praise r-cran-prettyunits r-cran-processx r-cran-ps r-cran-purrr r-cran-r6 r-cran-rcolorbrewer r-cran-rcpp r-cran-reshape2 r-cran-rlang r-cran-rprojroot r-cran-rstudioapi r-cran-scales r-cran-stringdist r-cran-stringi r-cran-stringr r-cran-tcr r-cran-testthat r-cran-tibble r-cran-tidyselect r-cran-utf8 r-cran-vctrs r-cran-viridislite r-cran-withr readline-common sensible-utils ucf unzip x11-common xdg-utils zip 0 upgraded, 0 newly installed, 154 to remove and 0 not upgraded. After this operation, 408 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 33287 files and directories currently installed.) Removing r-cran-tcr (2.3.2+ds-1) ... Removing r-cran-dplyr (1.0.0-1) ... Removing r-cran-igraph (1.2.5-1+b1) ... Removing r-cran-ggplot2 (3.3.1+dfsg-1) ... Removing r-cran-mgcv (1.8-31-1+b1) ... Removing r-cran-matrix (1.2-18-1+b1) ... Removing r-cran-reshape2 (1.4.4-2) ... Removing r-cran-scales (1.1.1-1) ... Removing r-cran-rcolorbrewer (1.1-2-3) ... Removing r-cran-bh (1.66.0-1) ... Removing libboost-dev:amd64 (1.71.0.3) ... Removing libboost1.71-dev:amd64 (1.71.0-6+b2) ... Removing libstdc++-9-dev:amd64 (9.3.0-13) ... Removing libgcc-9-dev:amd64 (9.3.0-13) ... Removing libasan5:amd64 (9.3.0-13) ... Removing libatomic1:amd64 (10.1.0-4) ... Removing libc6-dev:amd64 (2.30-8) ... Removing libc-dev-bin (2.30-8) ... Removing libcrypt-dev:amd64 (1:4.4.16-1) ... Removing r-cran-stringdist (0.9.5.5-1+b1) ... Removing r-cran-data.table (1.12.8+dfsg-2) ... Removing r-cran-stringr (1.4.0-2) ... Removing r-cran-stringi (1.4.6-1+b2) ... Removing libxml2:amd64 (2.9.10+dfsg-5+b1) ... Removing libitm1:amd64 (10.1.0-4) ... Removing liblsan0:amd64 (10.1.0-4) ... Removing libtsan0:amd64 (10.1.0-4) ... Removing libubsan1:amd64 (10.1.0-4) ... Removing linux-libc-dev:amd64 (5.6.14-2) ... Removing r-cran-plyr (1.8.6-2) ... Removing littler (0.3.10-1) ... Removing r-cran-isoband (0.2.1-1+b1) ... Removing r-cran-testthat (2.3.2-2+b1) ... Removing r-cran-pkgload (1.1.0-1) ... Removing r-cran-pkgbuild (1.0.8-2) ... Removing r-cran-desc (1.2.0-3) ... Removing r-cran-tibble (3.0.1-1+b1) ... Removing r-cran-rprojroot (1.3-2-3) ... Removing r-cran-backports (1.1.7-1) ... Removing r-cran-callr (3.4.3-2) ... Removing r-cran-munsell (0.5.0-2) ... Removing r-cran-colorspace (1.4-1+dfsg-1+b1) ... Removing r-cran-pillar (1.4.4-2) ... Removing r-cran-tidyselect (1.1.0+dfsg-1) ... Removing r-cran-vctrs (0.3.0-2) ... Removing r-cran-digest (0.6.25-1+b1) ... Removing r-cran-ellipsis (0.3.1-1) ... Removing r-cran-evaluate (0.14-2) ... Removing r-cran-farver (2.0.3-1+b1) ... Removing r-cran-generics (0.0.2-3) ... Removing r-cran-lifecycle (0.2.0-2) ... Removing r-cran-gridextra (2.3-3) ... Removing r-cran-gtable (0.3.0+dfsg-2) ... Removing r-cran-labeling (0.3-4) ... Removing r-cran-nlme (3.1.148-1) ... Removing r-cran-lattice (0.20-41-1+b1) ... Removing r-cran-purrr (0.3.4-1+b1) ... Removing r-cran-magrittr (1.5-6) ... Removing r-cran-mass (7.3-51.6-1+b1) ... Removing r-cran-pkgconfig (2.0.3-2) ... Removing r-cran-plogr (0.2.0-3) ... Removing r-cran-praise (1.0.0-4) ... Removing r-cran-prettyunits (1.1.1-2) ... Removing r-cran-processx (3.4.2-1+b1) ... Removing r-cran-ps (1.3.3-1+b1) ... Removing r-cran-r6 (2.4.1-2) ... Removing r-cran-rlang (0.4.6-1+b1) ... Removing r-cran-rstudioapi (0.11-2) ... Removing r-cran-utf8 (1.1.4-1+b2) ... Removing r-cran-viridislite (0.3.0-4) ... Removing r-cran-withr (2.2.0-2) ... Removing r-cran-rcpp (1.0.4.6-1+b1) ... Removing r-cran-cli (2.0.2-2) ... Removing r-cran-assertthat (0.2.1-2) ... Removing r-cran-crayon (1.3.4-5) ... Removing r-cran-fansi (0.4.1-1+b1) ... Removing r-cran-glue (1.4.1-1) ... Removing r-cran-littler (0.3.10-1) ... Removing r-cran-pkgkitten (0.1.5-2) ... Removing r-base-core (4.0.1-1) ... Removing ca-certificates (20200601) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing libpangocairo-1.0-0:amd64 (1.44.7-4) ... Removing libpangoft2-1.0-0:amd64 (1.44.7-4) ... Removing libpango-1.0-0:amd64 (1.44.7-4) ... Removing fontconfig (2.13.1-4.2) ... Removing libtk8.6:amd64 (8.6.10-1) ... Removing libxft2:amd64 (2.3.2-2) ... Removing libcairo2:amd64 (1.16.0-4) ... Removing libfontconfig1:amd64 (2.13.1-4.2) ... Removing fontconfig-config (2.13.1-4.2) ... Removing fonts-dejavu-core (2.37-2) ... Removing liblapack3:amd64 (3.9.0-2) ... Removing libblas3:amd64 (3.9.0-2) ... Removing libcurl4:amd64 (7.68.0-1) ... Removing libbrotli1:amd64 (1.0.7-6.1) ... Removing libxt6:amd64 (1:1.1.5-1+b3) ... Removing libxss1:amd64 (1:1.2.3-1) ... Removing libxcb-shm0:amd64 (1.14-2) ... Removing libsm6:amd64 (2:1.2.3-1) ... Removing libice6:amd64 (2:1.0.9-2) ... Removing libthai0:amd64 (0.1.28-3) ... Removing libdatrie1:amd64 (0.2.12-3) ... Removing libexpat1:amd64 (2.2.9-1) ... Removing libharfbuzz0b:amd64 (2.6.7-1) ... Removing libfreetype6:amd64 (2.10.1-2) ... Removing libfribidi0:amd64 (1.0.8-2) ... Removing libgfortran5:amd64 (10.1.0-4) ... Removing libglib2.0-0:amd64 (2.64.3-1) ... Removing libgomp1:amd64 (10.1.0-4) ... Removing libgraphite2-3:amd64 (1.3.14-1) ... Removing libgssapi-krb5-2:amd64 (1.17-10) ... Removing libicu67:amd64 (67.1-2) ... Removing libtiff5:amd64 (4.1.0+git191117-2) ... Removing libjbig0:amd64 (2.1-3.1+b2) ... Removing libjpeg62-turbo:amd64 (1:1.5.2-2+b1) ... Removing libkrb5-3:amd64 (1.17-10) ... Removing libk5crypto3:amd64 (1.17-10) ... Removing libkeyutils1:amd64 (1.6.1-2) ... Removing libkrb5support0:amd64 (1.17-10) ... Removing libldap-2.4-2:amd64 (2.4.50+dfsg-1) ... Removing libldap-common (2.4.50+dfsg-1) ... Removing libnghttp2-14:amd64 (1.41.0-2) ... Removing libpaper-utils (1.1.28+b1) ... Removing libpaper1:amd64 (1.1.28+b1) ... Removing libpixman-1-0:amd64 (0.36.0-1) ... Removing libpng16-16:amd64 (1.6.37-2) ... Removing libpsl5:amd64 (0.21.0-1.1) ... Removing libquadmath0:amd64 (10.1.0-4) ... Removing libreadline8:amd64 (8.0-4) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b1) ... Removing libsasl2-2:amd64 (2.1.27+dfsg-2) ... Removing libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Removing libssh2-1:amd64 (1.8.0-2.1) ... Removing openssl (1.1.1g-1) ... Removing libssl1.1:amd64 (1.1.1g-1) ... Removing libtcl8.6:amd64 (8.6.10+dfsg-1) ... Removing libthai-data (0.1.28-3) ... Removing libwebp6:amd64 (0.6.1-2+b1) ... Removing libxcb-render0:amd64 (1.14-2) ... Removing libxext6:amd64 (2:1.3.3-1+b2) ... Removing libxrender1:amd64 (1:0.9.10-1) ... Removing readline-common (8.0-4) ... Removing ucf (3.0043) ... Removing sensible-utils (0.0.12+nmu1) ... Removing unzip (6.0-25) ... Removing x11-common (1:7.7+20) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing xdg-utils (1.1.3-2) ... Removing zip (3.0-11+b1) ... Removing libx11-6:amd64 (2:1.6.9-2+b1) ... Removing libxcb1:amd64 (1.14-2) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libbsd0:amd64 (0.10.0-1) ... Removing libx11-data (2:1.6.9-2) ... Removing libxau6:amd64 (1:1.0.8-1+b2) ... Processing triggers for libc-bin (2.30-8) ... 0m52.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', 'remove', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libasan5:amd64', 'libatomic1:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.71-dev:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcrypt-dev:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-9-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu67:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'liblsan0:amd64', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libstdc++-9-dev:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'littler', 'openssl', 'r-base-core', 'r-cran-assertthat', 'r-cran-backports', 'r-cran-bh', 'r-cran-callr', 'r-cran-cli', 'r-cran-colorspace', 'r-cran-crayon', 'r-cran-data.table', 'r-cran-desc', 'r-cran-digest', 'r-cran-dplyr', 'r-cran-ellipsis', 'r-cran-evaluate', 'r-cran-fansi', 'r-cran-farver', 'r-cran-generics', 'r-cran-ggplot2', 'r-cran-glue', 'r-cran-gridextra', 'r-cran-gtable', 'r-cran-igraph', 'r-cran-isoband', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-pillar', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-pkgload', 'r-cran-plogr', 'r-cran-plyr', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-processx', 'r-cran-ps', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-reshape2', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-stringdist', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-testthat', 'r-cran-tibble', 'r-cran-tidyselect', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-withr', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip', 'r-cran-tcr'] 0m52.3s INFO: Running scripts post_remove 0m52.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_remove_exceptions'] 0m52.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_remove_exceptions'] 0m52.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg', '--purge', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libasan5:amd64', 'libatomic1:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.71-dev:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcrypt-dev:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-9-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu67:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'liblsan0:amd64', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libstdc++-9-dev:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'littler', 'openssl', 'r-base-core', 'r-cran-assertthat', 'r-cran-backports', 'r-cran-bh', 'r-cran-callr', 'r-cran-cli', 'r-cran-colorspace', 'r-cran-crayon', 'r-cran-data.table', 'r-cran-desc', 'r-cran-digest', 'r-cran-dplyr', 'r-cran-ellipsis', 'r-cran-evaluate', 'r-cran-fansi', 'r-cran-farver', 'r-cran-generics', 'r-cran-ggplot2', 'r-cran-glue', 'r-cran-gridextra', 'r-cran-gtable', 'r-cran-igraph', 'r-cran-isoband', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-pillar', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-pkgload', 'r-cran-plogr', 'r-cran-plyr', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-processx', 'r-cran-ps', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-reshape2', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-stringdist', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-testthat', 'r-cran-tibble', 'r-cran-tidyselect', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-withr', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip'] 0m52.8s DUMP: (Reading database ... 6568 files and directories currently installed.) Purging configuration files for ca-certificates (20200601) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for fontconfig (2.13.1-4.2) ... Purging configuration files for fontconfig-config (2.13.1-4.2) ... Purging configuration files for fonts-dejavu-core (2.37-2) ... dpkg: warning: while removing fonts-dejavu-core, directory '/usr/share/fonts/truetype/dejavu' not empty so not removed dpkg: warning: ignoring request to remove libasan5 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libboost-dev which isn't installed dpkg: warning: ignoring request to remove libboost1.71-dev which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcrypt-dev which isn't installed dpkg: warning: ignoring request to remove libcurl4 which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libgcc-9-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libglib2.0-0:amd64 (2.64.3-1) ... dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.17-10) ... dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu67 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove libldap-2.4-2 which isn't installed Purging configuration files for libldap-common (2.4.50+dfsg-1) ... dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpaper-utils which isn't installed Purging configuration files for libpaper1:amd64 (1.1.28+b1) ... dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpng16-16 which isn't installed dpkg: warning: ignoring request to remove libpsl5 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libreadline8 which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libssh2-1 which isn't installed Purging configuration files for libssl1.1:amd64 (1.1.1g-1) ... dpkg: warning: ignoring request to remove libstdc++-9-dev which isn't installed dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtiff5 which isn't installed dpkg: warning: ignoring request to remove libtk8.6 which isn't installed dpkg: warning: ignoring request to remove libtsan0 which isn't installed dpkg: warning: ignoring request to remove libubsan1 which isn't installed dpkg: warning: ignoring request to remove libwebp6 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxss1 which isn't installed dpkg: warning: ignoring request to remove libxt6 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed dpkg: warning: ignoring request to remove littler which isn't installed Purging configuration files for openssl (1.1.1g-1) ... Purging configuration files for r-base-core (4.0.1-1) ... dpkg: warning: ignoring request to remove r-cran-assertthat which isn't installed dpkg: warning: ignoring request to remove r-cran-backports which isn't installed dpkg: warning: ignoring request to remove r-cran-bh which isn't installed dpkg: warning: ignoring request to remove r-cran-callr which isn't installed dpkg: warning: ignoring request to remove r-cran-cli which isn't installed dpkg: warning: ignoring request to remove r-cran-colorspace which isn't installed dpkg: warning: ignoring request to remove r-cran-crayon which isn't installed dpkg: warning: ignoring request to remove r-cran-data.table which isn't installed dpkg: warning: ignoring request to remove r-cran-desc which isn't installed dpkg: warning: ignoring request to remove r-cran-digest which isn't installed dpkg: warning: ignoring request to remove r-cran-dplyr which isn't installed dpkg: warning: ignoring request to remove r-cran-ellipsis which isn't installed dpkg: warning: ignoring request to remove r-cran-evaluate which isn't installed dpkg: warning: ignoring request to remove r-cran-fansi which isn't installed dpkg: warning: ignoring request to remove r-cran-farver which isn't installed dpkg: warning: ignoring request to remove r-cran-generics which isn't installed dpkg: warning: ignoring request to remove r-cran-ggplot2 which isn't installed dpkg: warning: ignoring request to remove r-cran-glue which isn't installed dpkg: warning: ignoring request to remove r-cran-gridextra which isn't installed dpkg: warning: ignoring request to remove r-cran-gtable which isn't installed dpkg: warning: ignoring request to remove r-cran-igraph which isn't installed dpkg: warning: ignoring request to remove r-cran-isoband which isn't installed dpkg: warning: ignoring request to remove r-cran-labeling which isn't installed dpkg: warning: ignoring request to remove r-cran-lattice which isn't installed dpkg: warning: ignoring request to remove r-cran-lifecycle which isn't installed dpkg: warning: ignoring request to remove r-cran-littler which isn't installed dpkg: warning: ignoring request to remove r-cran-magrittr which isn't installed dpkg: warning: ignoring request to remove r-cran-mass which isn't installed dpkg: warning: ignoring request to remove r-cran-matrix which isn't installed dpkg: warning: ignoring request to remove r-cran-mgcv which isn't installed dpkg: warning: ignoring request to remove r-cran-munsell which isn't installed dpkg: warning: ignoring request to remove r-cran-nlme which isn't installed dpkg: warning: ignoring request to remove r-cran-pillar which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgbuild which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgconfig which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgkitten which isn't installed dpkg: warning: ignoring request to remove r-cran-pkgload which isn't installed dpkg: warning: ignoring request to remove r-cran-plogr which isn't installed dpkg: warning: ignoring request to remove r-cran-plyr which isn't installed dpkg: warning: ignoring request to remove r-cran-praise which isn't installed dpkg: warning: ignoring request to remove r-cran-prettyunits which isn't installed dpkg: warning: ignoring request to remove r-cran-processx which isn't installed dpkg: warning: ignoring request to remove r-cran-ps which isn't installed dpkg: warning: ignoring request to remove r-cran-purrr which isn't installed dpkg: warning: ignoring request to remove r-cran-r6 which isn't installed dpkg: warning: ignoring request to remove r-cran-rcolorbrewer which isn't installed dpkg: warning: ignoring request to remove r-cran-rcpp which isn't installed dpkg: warning: ignoring request to remove r-cran-reshape2 which isn't installed dpkg: warning: ignoring request to remove r-cran-rlang which isn't installed dpkg: warning: ignoring request to remove r-cran-rprojroot which isn't installed dpkg: warning: ignoring request to remove r-cran-rstudioapi which isn't installed dpkg: warning: ignoring request to remove r-cran-scales which isn't installed dpkg: warning: ignoring request to remove r-cran-stringdist which isn't installed dpkg: warning: ignoring request to remove r-cran-stringi which isn't installed dpkg: warning: ignoring request to remove r-cran-stringr which isn't installed dpkg: warning: ignoring request to remove r-cran-testthat which isn't installed dpkg: warning: ignoring request to remove r-cran-tibble which isn't installed dpkg: warning: ignoring request to remove r-cran-tidyselect which isn't installed dpkg: warning: ignoring request to remove r-cran-utf8 which isn't installed dpkg: warning: ignoring request to remove r-cran-vctrs which isn't installed dpkg: warning: ignoring request to remove r-cran-viridislite which isn't installed dpkg: warning: ignoring request to remove r-cran-withr which isn't installed Purging configuration files for readline-common (8.0-4) ... dpkg: warning: ignoring request to remove sensible-utils which isn't installed Purging configuration files for ucf (3.0043) ... Purging configuration files for unzip (6.0-25) ... Purging configuration files for x11-common (1:7.7+20) ... dpkg: warning: ignoring request to remove xdg-utils which isn't installed dpkg: warning: ignoring request to remove zip which isn't installed 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg', '--purge', 'ca-certificates', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'libasan5:amd64', 'libatomic1:amd64', 'libblas3:amd64', 'libboost-dev:amd64', 'libboost1.71-dev:amd64', 'libbrotli1:amd64', 'libbsd0:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcairo2:amd64', 'libcrypt-dev:amd64', 'libcurl4:amd64', 'libdatrie1:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-9-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0:amd64', 'libgomp1:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libice6:amd64', 'libicu67:amd64', 'libitm1:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'libldap-2.4-2:amd64', 'libldap-common', 'liblsan0:amd64', 'libnghttp2-14:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libpixman-1-0:amd64', 'libpng16-16:amd64', 'libpsl5:amd64', 'libquadmath0:amd64', 'libreadline8:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules-db:amd64', 'libsm6:amd64', 'libssh2-1:amd64', 'libssl1.1:amd64', 'libstdc++-9-dev:amd64', 'libtcl8.6:amd64', 'libthai-data', 'libthai0:amd64', 'libtiff5:amd64', 'libtk8.6:amd64', 'libtsan0:amd64', 'libubsan1:amd64', 'libwebp6:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb-render0:amd64', 'libxcb-shm0:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxss1:amd64', 'libxt6:amd64', 'linux-libc-dev:amd64', 'littler', 'openssl', 'r-base-core', 'r-cran-assertthat', 'r-cran-backports', 'r-cran-bh', 'r-cran-callr', 'r-cran-cli', 'r-cran-colorspace', 'r-cran-crayon', 'r-cran-data.table', 'r-cran-desc', 'r-cran-digest', 'r-cran-dplyr', 'r-cran-ellipsis', 'r-cran-evaluate', 'r-cran-fansi', 'r-cran-farver', 'r-cran-generics', 'r-cran-ggplot2', 'r-cran-glue', 'r-cran-gridextra', 'r-cran-gtable', 'r-cran-igraph', 'r-cran-isoband', 'r-cran-labeling', 'r-cran-lattice', 'r-cran-lifecycle', 'r-cran-littler', 'r-cran-magrittr', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-munsell', 'r-cran-nlme', 'r-cran-pillar', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgkitten', 'r-cran-pkgload', 'r-cran-plogr', 'r-cran-plyr', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-processx', 'r-cran-ps', 'r-cran-purrr', 'r-cran-r6', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-reshape2', 'r-cran-rlang', 'r-cran-rprojroot', 'r-cran-rstudioapi', 'r-cran-scales', 'r-cran-stringdist', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-testthat', 'r-cran-tibble', 'r-cran-tidyselect', 'r-cran-utf8', 'r-cran-vctrs', 'r-cran-viridislite', 'r-cran-withr', 'readline-common', 'sensible-utils', 'ucf', 'unzip', 'x11-common', 'xdg-utils', 'zip'] 0m52.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg', '--purge', 'r-cran-tcr'] 0m52.8s DUMP: dpkg: warning: ignoring request to remove r-cran-tcr which isn't installed 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg', '--purge', 'r-cran-tcr'] 0m52.8s INFO: Running scripts post_purge 0m52.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_purge_exceptions'] 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_purge_exceptions'] 0m52.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg', '--purge', '--pending'] 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg', '--purge', '--pending'] 0m52.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg', '--remove', '--pending'] 0m52.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg', '--remove', '--pending'] 0m52.8s INFO: Running scripts post_test 0m52.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_test_exceptions'] 0m52.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'tmp/scripts/post_test_exceptions'] 0m52.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m53.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m53.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg-divert', '--list'] 0m53.1s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m53.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'dpkg-divert', '--list'] 0m53.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', 'clean'] 0m53.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v', 'apt-get', 'clean'] 0m53.1s DEBUG: Recording chroot state 0m53.5s INFO: Warning: Package purging left files on system: /usr/local/share/fonts/ not owned /usr/local/share/fonts/.uuid not owned /usr/share/fonts/ owned by: fonts-dejavu-core /usr/share/fonts/.uuid not owned /usr/share/fonts/truetype/ owned by: fonts-dejavu-core /usr/share/fonts/truetype/.uuid not owned /usr/share/fonts/truetype/dejavu/ owned by: fonts-dejavu-core /usr/share/fonts/truetype/dejavu/.uuid not owned 0m53.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/shm'] 0m53.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/shm'] 0m53.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/console'] 0m53.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/console'] 0m53.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/ptmx'] 0m53.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/ptmx'] 0m53.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/pts'] 0m53.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/dev/pts'] 0m53.9s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/proc'] 0m53.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v/proc'] 0m53.9s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m54.0s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpifqpkm5v'] 0m54.0s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpifqpkm5v 0m54.0s INFO: PASS: Upgrading between Debian distributions. 0m54.0s INFO: PASS: All tests. 0m54.0s INFO: piuparts run ends. ret=0 End: 2020-06-17 11:22:57 GMT