Start: 2024-12-10 02:42:42 GMT Package: iva Version: 1.0.11+ds-6 Installed-Size: 8770 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: fastaq, python3-networkx, python3-packaging, python3-pysam, python3:any, perl:any, kmc, mummer, smalt, samtools, python3-numpy, default-jre-headless Recommends: r-base-core, bioperl, trimmomatic Description: iterative virus sequence assembler Homepage: https://github.com/sanger-pathogens/iva Description-md5: 698e26411c0dbe5917f816e7b7229be9 Tag: biology::nucleic-acids, field::biology, field::biology:bioinformatics, implemented-in::python, interface::commandline, role::program, works-with::biological-sequence, works-with::file Section: science Priority: optional Filename: pool/main/i/iva/iva_1.0.11+ds-6_amd64.deb Size: 8581812 MD5sum: 3bb224aeb71839351829ccb0174f884c SHA256: dfc79c21433530b4e62523cb0e4ac77efd6c8f4ac8d4ba907fdc08875f8cfd93 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt iva=1.0.11+ds-6 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt iva=1.0.11+ds-6 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpt74ftwqh 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpt74ftwqh 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/proc'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/proc'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpt74ftwqh/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', 'update'] 0m3.6s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [172 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9341 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6270 kB] Fetched 15.8 MB in 2s (8213 kB/s) Reading package lists... 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', 'update'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', '-yf', 'dist-upgrade'] 0m6.0s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: bash bsdutils libblkid1 libdebconfclient0 libgpg-error0 libmount1 libsmartcols1 libunistring5 libuuid1 login mount util-linux 12 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4163 kB of archives. After this operation, 271 kB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 bash amd64 5.2.37-1 [1501 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.2-12 [106 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.2-12 [36.0 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.2-12 [168 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.2-12 [199 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.2-12 [139 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.2-12 [1209 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.2-12 [155 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.2-12 [81.8 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libdebconfclient0 amd64 0.274 [10.1 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libgpg-error0 amd64 1.51-2 [82.1 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libunistring5 amd64 1.3-1 [476 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4163 kB in 0s (48.9 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5142 files and directories currently installed.) Preparing to unpack .../bash_5.2.37-1_amd64.deb ... Unpacking bash (5.2.37-1) over (5.2.32-1+b2) ... Setting up bash (5.2.37-1) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.2-12_amd64.deb ... Unpacking bsdutils (1:2.40.2-12) over (1:2.40.2-11) ... Setting up bsdutils (1:2.40.2-12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libuuid1_2.40.2-12_amd64.deb ... Unpacking libuuid1:amd64 (2.40.2-12) over (2.40.2-11) ... Setting up libuuid1:amd64 (2.40.2-12) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.2-12_amd64.deb ... Unpacking libmount1:amd64 (2.40.2-12) over (2.40.2-11) ... Setting up libmount1:amd64 (2.40.2-12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.2-12_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.2-12) over (2.40.2-11) ... Setting up libsmartcols1:amd64 (2.40.2-12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.2-12_amd64.deb ... Unpacking util-linux (2.40.2-12) over (2.40.2-11) ... Setting up util-linux (2.40.2-12) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5138 files and directories currently installed.) Preparing to unpack .../mount_2.40.2-12_amd64.deb ... Unpacking mount (2.40.2-12) over (2.40.2-11) ... Preparing to unpack .../login_1%3a4.16.0-2+really2.40.2-12_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.2-12) over (1:4.16.0-2+really2.40.2-11) ... Preparing to unpack .../libdebconfclient0_0.274_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.274) over (0.273) ... Setting up libdebconfclient0:amd64 (0.274) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5138 files and directories currently installed.) Preparing to unpack .../libgpg-error0_1.51-2_amd64.deb ... Unpacking libgpg-error0:amd64 (1.51-2) over (1.50-4) ... Setting up libgpg-error0:amd64 (1.51-2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5138 files and directories currently installed.) Preparing to unpack .../libunistring5_1.3-1_amd64.deb ... Unpacking libunistring5:amd64 (1.3-1) over (1.2-1+b1) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up mount (2.40.2-12) ... Setting up login (1:4.16.0-2+really2.40.2-12) ... Processing triggers for debianutils (5.21) ... Processing triggers for libc-bin (2.40-4) ... 0m6.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', '-yf', 'dist-upgrade'] 0m6.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s DUMP: 695469f0cbe47b5af90dbdd55c0307ec - 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.4s INFO: Running scripts post_setup 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_dummy_users'] 0m7.3s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_dummy_users'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_forbid_home'] 0m7.3s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_forbid_home'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.4s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_minimize'] 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_minimize'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_zz_backports'] 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_setup_zz_backports'] 0m7.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', 'clean'] 0m7.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', 'clean'] 0m7.4s DEBUG: Recording chroot state 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.1s DUMP: install ok installed apt apt 2.9.16 install ok installed base-files base-files 13.6 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.37-1 install ok installed bsdutils bsdutils 1:2.40.2-12 install ok installed coreutils coreutils 9.5-1+b1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.21 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.2~rc1-2 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-8 install ok installed gpgv gpgv 2.2.45-2 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.25 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.16 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.2-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2 install ok installed libblkid1:amd64 libblkid1 2.40.2-12 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-4 install ok installed libc6:amd64 libc6 2.40-4 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.2~rc1-2 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.274 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2~rc1-2 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-8 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.8-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.51-2 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmount1:amd64 libmount1 2.40.2-12 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2+b1 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.44-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2 install ok installed libselinux1:amd64 libselinux1 3.7-3+b1 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2+b1 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-12 install ok installed libss2:amd64 libss2 1.47.2~rc1-2 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-8 install ok installed libsystemd0:amd64 libsystemd0 257~rc3-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libudev1:amd64 libudev1 257~rc3-1 install ok installed libunistring5:amd64 libunistring5 1.3-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-12 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed login login 1:4.16.0-2+really2.40.2-12 install ok installed login.defs login.defs 1:4.16.0-5 install ok installed logsave logsave 1.47.2~rc1-2 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-12 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed passwd passwd 1:4.16.0-5 install ok installed perl-base perl-base 5.40.0-8 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024b-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-12 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg-divert', '--list'] 0m8.1s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg-divert', '--list'] 0m8.1s INFO: Running scripts is_testable 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/is_testable_uninstallable'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/is_testable_uninstallable'] 0m8.1s INFO: apt-cache does not know about any of the requested packages 0m8.1s INFO: Running scripts pre_test 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_test_exceptions'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_test_exceptions'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_test_root_password'] 0m8.1s DUMP: New password: Retype new password: passwd: password updated successfully 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_test_root_password'] 0m8.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 0m8.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 0m9.3s DEBUG: No broken symlinks as far as we can find. 0m9.3s INFO: Running scripts pre_install 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_database-server'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_database-server'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_exceptions'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_exceptions'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_extras'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_extras'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 0m9.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 0m10.5s DEBUG: No broken symlinks as far as we can find. 0m10.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-cache', 'policy'] 0m11.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m11.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-cache', 'policy'] 0m11.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-cache', 'policy', 'iva'] 0m11.6s DUMP: iva: Installed: (none) Candidate: 1.0.11+ds-6 Version table: 1.0.11+ds-6 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m11.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-cache', 'policy', 'iva'] 0m11.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', '-y', 'install', 'iva=1.0.11+ds-6'] 2m6.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: adduser adwaita-icon-theme alsa-topology-conf alsa-ucm-conf amap-align apache2-bin at-spi2-common at-spi2-core binutils binutils-common binutils-x86-64-linux-gnu bioperl bioperl-run blends-common blt build-essential bwa bzip2 bzip2-doc ca-certificates ca-certificates-java clustalo clustalw cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jdk-headless default-jre default-jre-headless dialign-tx dialign-tx-data dirmngr dmsetup dpkg-dev exonerate fakeroot fastaq file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-droid-fallback fonts-lato fonts-liberation fonts-liberation-sans-narrow fonts-lyx fonts-noto-mono fonts-urw-base35 fsa g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gawk gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu ghostscript gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpgconf gpgsm graphviz gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme icu-devtools isympy-common isympy3 java-common javascript-common kalign kmc krb5-locales lagan libabsl20230802 libace-perl libaec0 libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libalgorithm-munkres-perl libann0 libaom3 libapache-dbi-perl libapache2-mod-perl2 libapache2-reload-perl libapparmor1 libapr1t64 libaprutil1-dbd-sqlite3 libaprutil1-ldap libaprutil1t64 libargtable2-0 libarmadillo14 libarpack2t64 libarray-compare-perl libasan8 libasound2-data libasound2t64 libassuan9 libatk-bridge2.0-0t64 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0t64 libatomic1 libatspi2.0-0t64 libauthen-sasl-perl libavahi-client3 libavahi-common-data libavahi-common3 libavif16 libb-hooks-endofscope-perl libb-hooks-op-check-perl libbambamc0 libbinutils libbio-asn1-entrezgene-perl libbio-cluster-perl libbio-eutilities-perl libbio-featureio-perl libbio-perl-perl libbio-perl-run-perl libbio-tools-run-remoteblast-perl libbio-variation-perl libbit-vector-perl libblas-dev libblas3 libblosc1 libbrotli1 libbsd-resource-perl libbz2-dev libc-dev-bin libc6-dev libcache-cache-perl libcairo-gobject2 libcairo2 libcapture-tiny-perl libcarp-clan-perl libcc1-0 libcdt5 libcfitsio10t64 libcgi-fast-perl libcgi-pm-perl libcgraph6 libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcloudproviders0 libcolord2 libconvert-binary-c-perl libconvert-binhex-perl libcrypt-dev libcrypt-rc4-perl libcryptsetup12 libctf-nobfd0 libctf0 libcups2t64 libcurl3t64-gnutls libcurl4t64 libdata-dump-perl libdata-stag-perl libdate-calc-perl libdate-calc-xs-perl libdate-manip-perl libdatrie1 libdav1d7 libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdbus-1-3 libdconf1 libde265-0 libdeflate-dev libdeflate0 libdevel-callchecker-perl libdevel-stacktrace-perl libdevel-symdump-perl libdevmapper1.02.1 libdigest-perl-md5-perl libdpkg-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libegl-mesa0 libegl1 libelf1t64 libencode-locale-perl libepoxy0 liberror-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfakeroot libfcgi-bin libfcgi-perl libfcgi0t64 libfile-basedir-perl libfile-desktopentry-perl libfile-fcntllock-perl libfile-listing-perl libfile-mimeinfo-perl libfile-slurp-tiny-perl libfile-sort-perl libfont-afm-perl libfontconfig1 libfontenc1 libfreetype6 libfreexl1 libfreezethaw-perl libfribidi0 libfyba0t64 libgav1-1 libgbm1 libgcc-14-dev libgd-perl libgd3 libgdal35 libgdbm-compat4t64 libgdbm6t64 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran-14-dev libgfortran5 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libgles2 libglib2.0-0t64 libglib2.0-data libglvnd0 libglx-mesa0 libglx0 libgomp1 libgpgme11t64 libgpgmepp6t64 libgpm2 libgprofng0 libgraph-perl libgraphite2-3 libgraphviz-perl libgs-common libgs10 libgs10-common libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-bin libgtk-3-common libgts-0.7-5t64 libgts-bin libgvc6 libgvpr2 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 libhdf5-hl-100t64 libheap-perl libheif-plugin-aomenc libheif-plugin-dav1d libheif-plugin-libde265 libheif-plugin-x265 libheif1 libhtml-form-perl libhtml-format-perl libhtml-parser-perl libhtml-tableextract-perl libhtml-tagset-perl libhtml-tree-perl libhts3t64 libhtscodecs2 libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhwasan0 libice6 libicu-dev libicu72 libidn12 libijs-0.35 libimagequant0 libimport-into-perl libio-compress-brotli-perl libio-html-perl libio-pty-perl libio-sessiondata-perl libio-socket-ssl-perl libio-string-perl libio-stringy-perl libipc-run-perl libipc-sharelite-perl libipc-system-simple-perl libisl23 libitm1 libjansson4 libjbig0 libjbig2dec0 libjbzip2-java libjcode-pm-perl libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjson-c5 libk5crypto3 libkeyutils1 libkmlbase1t64 libkmldom1t64 libkmlengine1t64 libkmod2 libkrb5-3 libkrb5support0 libksba8 liblab-gamut1 liblapack-dev liblapack3 liblbfgsb0 liblcms2-2 libldap-2.5-0 libldap-common liblerc4 liblist-moreutils-perl liblist-moreutils-xs-perl libllvm19 liblmdb0 liblocale-gettext-perl liblsan0 libltdl7 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzma-dev libmagic-mgc libmagic1t64 libmailtools-perl libmariadb3 libmath-derivative-perl libmath-spline-perl libmbedcrypto16 libmbedtls21 libmbedx509-7 libmime-tools-perl libminizip1t64 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmpc3 libmpfr6 libnamespace-clean-perl libncurses-dev libncurses6 libncursesw6 libnet-dbus-perl libnet-http-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnetcdf19t64 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnsl2 libnspr4 libnss-systemd libnss3 libnuma1 libodbc2 libodbcinst2 libogdi4.1 libole-storage-lite-perl libopenjp2-7 libpackage-stash-perl libpackage-stash-xs-perl libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl libparse-recdescent-perl libpathplan4 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpcsclite1 libperl5.40 libpixman-1-0 libpkgconf3 libpng-dev libpng-tools libpng16-16t64 libpoppler140 libpostscript-perl libpq5 libproc2-0 libproj25 libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libqhull-r8.0 libquadmath0 libraqm0 librav1e0.7 libreadline-dev libreadline8t64 libreadonly-perl libref-util-perl libref-util-xs-perl librole-tiny-perl librsvg2-2 librsvg2-common librtmp1 librttopo1 libruby libruby3.1t64 libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libset-object-perl libset-scalar-perl libsframe1 libsharpyuv0 libsigsegv2 libsm6 libsnappy1v5 libsoap-lite-perl libsort-naturally-perl libspatialite8t64 libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsqlite3-0 libssh2-1t64 libstatistics-descriptive-perl libstdc++-14-dev libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libsub-uplevel-perl libsvg-graph-perl libsvg-perl libsvtav1enc2 libsystemd-shared libsz2 libtask-weaken-perl libtcl8.6 libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-requiresinternet-perl libtest-warn-perl libtext-csv-perl libtext-csv-xs-perl libtext-diff-perl libtext-iconv-perl libthai-data libthai0 libtie-ixhash-perl libtiff6 libtimedate-perl libtirpc-common libtirpc-dev libtirpc3t64 libtk8.6 libtree-dagnode-perl libtry-tiny-perl libtsan2 libtype-tiny-perl libtype-tiny-xs-perl libubsan1 libunicode-map-perl liburi-perl liburiparser1 libuv1t64 libvariable-magic-perl libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-protocol-perl libx11-xcb1 libx265-209 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces-c3.2t64 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxkbfile1 libxml-dom-perl libxml-dom-xpath-perl libxml-filter-buffertext-perl libxml-libxml-perl libxml-libxslt-perl libxml-namespacesupport-perl libxml-parser-perl libxml-perl libxml-regexp-perl libxml-sax-base-perl libxml-sax-expat-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libxml-xpath-perl libxml-xpathengine-perl libxml2 libxmlrpc-lite-perl libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxstring-perl libxt6t64 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 libyaml-0-2 libyaml-libyaml-perl libyaml-perl libyuv0 libz3-4 linux-libc-dev linux-sysctl-defaults luit lynx lynx-common mafft mailcap make manpages manpages-dev maq mariadb-common med-config media-types menu mesa-libgallium mesa-vulkan-drivers mummer muscle mustang mysql-common ncbi-blast+ ncbi-blast+-legacy ncbi-data ncoils netbase openjdk-21-jdk-headless openjdk-21-jre openjdk-21-jre-headless openssl pal2nal paml patch perl perl-doc perl-modules-5.40 perl-openssl-defaults perl-tk phylip pinentry-curses pkgconf pkgconf-bin poa poppler-data prank primer3 probalign probcons procps proda proj-bin proj-data psmisc publicsuffix python-matplotlib-data python3 python3-appdirs python3-attr python3-autocommand python3-brotli python3-bs4 python3-chardet python3-contourpy python3-cssselect python3-cycler python3-dateutil python3-decorator python3-fonttools python3-fs python3-gdal python3-html5lib python3-inflect python3-jaraco.context python3-jaraco.functools python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib python3-minimal python3-more-itertools python3-mpmath python3-networkx python3-numpy python3-olefile python3-packaging python3-pil python3-pil.imagetk python3-pkg-resources python3-pydot python3-pygraphviz python3-pyparsing python3-pysam python3-scipy python3-soupsieve python3-sympy python3-tk python3-typeguard python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2 python3-webencodings python3-yaml python3.12 python3.12-minimal python3.12-tk python3.13-tk r-base-core r-base-dev r-cran-boot r-cran-class r-cran-cluster r-cran-codetools r-cran-foreign r-cran-kernsmooth r-cran-lattice r-cran-mass r-cran-matrix r-cran-mgcv r-cran-nlme r-cran-nnet r-cran-rpart r-cran-spatial r-cran-survival r-doc-html r-recommended rake raxml readline-common rpcsvc-proto ruby ruby-net-telnet ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration samtools sensible-utils shared-mime-info sim4 smalt systemd systemd-cryptsetup systemd-sysv systemd-timesyncd t-coffee tk8.6-blt2.5 tm-align trimmomatic ucf unicode-data unixodbc-common unzip wise wise-data x11-common x11-utils x11-xserver-utils xauth xdg-user-dirs xdg-utils xfonts-encodings xfonts-utils xkb-data xz-utils zip zlib1g-dev zutty Suggested packages: cron quota adwaita-icon-theme-legacy apache2-doc apache2-suexec-pristine | apache2-suexec-custom binutils-doc gprofng-gui groff-base gmap fasta3 trnascan-se bedtools bowtie emboss hmmer hyphy-pt | hyphy-mpi infernal libbio-tools-run-alignment-clustalw-perl pftools phyml tigr-glimmer blends-doc blt-demo clustalx seaview cpp-doc gcc-14-locales cpp-14-doc pinentry-gnome3 tor debian-keyring fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre g++-multilib g++-14-multilib gcc-14-doc gawk-doc gcc-multilib autoconf automake libtool flex bison gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu gfortran-multilib gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev texlive-binaries gpg-wks-server parcimonie xloadimage scdaemon gsfonts graphviz-doc apache2 | lighttpd | httpd alsa-utils libasound2-plugins libdigest-hmac-perl libgssapi-perl libxml-sax-expatxs-perl liblapack-doc libc-devtools glibc-doc colord cups-common libnet-daemon-perl libsql-statement-perl git bzr libgd-tools gdbm-l10n geotiff-bin gdal-bin libgeotiff-epsg low-memory-monitor gpm krb5-doc krb5-user gvfs libhdf4-alt-dev hdf4-tools libheif-plugin-ffmpegdec libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e libheif-plugin-svtenc libhtml-element-extended-perl icu-doc libjs-jquery-ui-docs liblcms2-utils libcrypt-ssleay-perl liblzma-doc ncurses-doc libtss2-rc0t64 odbc-postgresql tdsodbc ogdi-bin libscalar-number-perl pciutils pcscd readline-doc librsvg2-bin libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal libsasl2-modules-ldap libsasl2-modules-otp libsasl2-modules-sql lm-sensors libmime-lite-perl libnet-jabber-perl libstdc++-14-doc libarchive13t64 libbpf1 libdw1t64 libfido2-1 libip4tc2 libpwquality1 libqrencode4 tcl8.6 tk8.6 libdevel-lexalias-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl libunicode-map8-perl libunicode-string-perl xml-twig-tools libyaml-shell-perl make-doc man-browser menu-l10n gksu | kde-cli-tools | ktsuss mustang-testdata gnuplot openjdk-21-demo openjdk-21-source libnss-mdns fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic ed diffutils-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl debhelper phylip-doc pinentry-doc blast2 poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum ncbi-epcr probcons-extra python3-doc python3-venv python-attr-doc python-cycler-doc python3-genshi python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft gir1.2-gtk-3.0 inkscape ipython3 python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 python-numpy-doc python3-dev python3-pytest python-pil-doc python3-setuptools python-pygraphviz-doc python-pyparsing-doc python-scipy-doc texlive-fonts-extra python-sympy-doc tix python3-tk-dbg python3.12-venv python3.12-doc binfmt-support elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic texlive-fonts-recommended texlive-latex-recommended texinfo ri ruby-dev bundler cwltool systemd-container systemd-homed systemd-userdbd systemd-boot systemd-resolved systemd-repart libtss2-tcti-device0 polkitd boxshade t-coffee-examples pymol rasmol wise-doc mesa-utils nickle cairo-5c xorg-docs-core Recommended packages: blast2 The following NEW packages will be installed: adduser adwaita-icon-theme alsa-topology-conf alsa-ucm-conf amap-align apache2-bin at-spi2-common at-spi2-core binutils binutils-common binutils-x86-64-linux-gnu bioperl bioperl-run blends-common blt build-essential bwa bzip2 bzip2-doc ca-certificates ca-certificates-java clustalo clustalw cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jdk-headless default-jre default-jre-headless dialign-tx dialign-tx-data dirmngr dmsetup dpkg-dev exonerate fakeroot fastaq file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-droid-fallback fonts-lato fonts-liberation fonts-liberation-sans-narrow fonts-lyx fonts-noto-mono fonts-urw-base35 fsa g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gawk gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu ghostscript gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpgconf gpgsm graphviz gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme icu-devtools isympy-common isympy3 iva java-common javascript-common kalign kmc krb5-locales lagan libabsl20230802 libace-perl libaec0 libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libalgorithm-munkres-perl libann0 libaom3 libapache-dbi-perl libapache2-mod-perl2 libapache2-reload-perl libapparmor1 libapr1t64 libaprutil1-dbd-sqlite3 libaprutil1-ldap libaprutil1t64 libargtable2-0 libarmadillo14 libarpack2t64 libarray-compare-perl libasan8 libasound2-data libasound2t64 libassuan9 libatk-bridge2.0-0t64 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0t64 libatomic1 libatspi2.0-0t64 libauthen-sasl-perl libavahi-client3 libavahi-common-data libavahi-common3 libavif16 libb-hooks-endofscope-perl libb-hooks-op-check-perl libbambamc0 libbinutils libbio-asn1-entrezgene-perl libbio-cluster-perl libbio-eutilities-perl libbio-featureio-perl libbio-perl-perl libbio-perl-run-perl libbio-tools-run-remoteblast-perl libbio-variation-perl libbit-vector-perl libblas-dev libblas3 libblosc1 libbrotli1 libbsd-resource-perl libbz2-dev libc-dev-bin libc6-dev libcache-cache-perl libcairo-gobject2 libcairo2 libcapture-tiny-perl libcarp-clan-perl libcc1-0 libcdt5 libcfitsio10t64 libcgi-fast-perl libcgi-pm-perl libcgraph6 libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcloudproviders0 libcolord2 libconvert-binary-c-perl libconvert-binhex-perl libcrypt-dev libcrypt-rc4-perl libcryptsetup12 libctf-nobfd0 libctf0 libcups2t64 libcurl3t64-gnutls libcurl4t64 libdata-dump-perl libdata-stag-perl libdate-calc-perl libdate-calc-xs-perl libdate-manip-perl libdatrie1 libdav1d7 libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdbus-1-3 libdconf1 libde265-0 libdeflate-dev libdeflate0 libdevel-callchecker-perl libdevel-stacktrace-perl libdevel-symdump-perl libdevmapper1.02.1 libdigest-perl-md5-perl libdpkg-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libegl-mesa0 libegl1 libelf1t64 libencode-locale-perl libepoxy0 liberror-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfakeroot libfcgi-bin libfcgi-perl libfcgi0t64 libfile-basedir-perl libfile-desktopentry-perl libfile-fcntllock-perl libfile-listing-perl libfile-mimeinfo-perl libfile-slurp-tiny-perl libfile-sort-perl libfont-afm-perl libfontconfig1 libfontenc1 libfreetype6 libfreexl1 libfreezethaw-perl libfribidi0 libfyba0t64 libgav1-1 libgbm1 libgcc-14-dev libgd-perl libgd3 libgdal35 libgdbm-compat4t64 libgdbm6t64 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran-14-dev libgfortran5 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libgles2 libglib2.0-0t64 libglib2.0-data libglvnd0 libglx-mesa0 libglx0 libgomp1 libgpgme11t64 libgpgmepp6t64 libgpm2 libgprofng0 libgraph-perl libgraphite2-3 libgraphviz-perl libgs-common libgs10 libgs10-common libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-bin libgtk-3-common libgts-0.7-5t64 libgts-bin libgvc6 libgvpr2 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 libhdf5-hl-100t64 libheap-perl libheif-plugin-aomenc libheif-plugin-dav1d libheif-plugin-libde265 libheif-plugin-x265 libheif1 libhtml-form-perl libhtml-format-perl libhtml-parser-perl libhtml-tableextract-perl libhtml-tagset-perl libhtml-tree-perl libhts3t64 libhtscodecs2 libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhwasan0 libice6 libicu-dev libicu72 libidn12 libijs-0.35 libimagequant0 libimport-into-perl libio-compress-brotli-perl libio-html-perl libio-pty-perl libio-sessiondata-perl libio-socket-ssl-perl libio-string-perl libio-stringy-perl libipc-run-perl libipc-sharelite-perl libipc-system-simple-perl libisl23 libitm1 libjansson4 libjbig0 libjbig2dec0 libjbzip2-java libjcode-pm-perl libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjson-c5 libk5crypto3 libkeyutils1 libkmlbase1t64 libkmldom1t64 libkmlengine1t64 libkmod2 libkrb5-3 libkrb5support0 libksba8 liblab-gamut1 liblapack-dev liblapack3 liblbfgsb0 liblcms2-2 libldap-2.5-0 libldap-common liblerc4 liblist-moreutils-perl liblist-moreutils-xs-perl libllvm19 liblmdb0 liblocale-gettext-perl liblsan0 libltdl7 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzma-dev libmagic-mgc libmagic1t64 libmailtools-perl libmariadb3 libmath-derivative-perl libmath-spline-perl libmbedcrypto16 libmbedtls21 libmbedx509-7 libmime-tools-perl libminizip1t64 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmpc3 libmpfr6 libnamespace-clean-perl libncurses-dev libncurses6 libncursesw6 libnet-dbus-perl libnet-http-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnetcdf19t64 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnsl2 libnspr4 libnss-systemd libnss3 libnuma1 libodbc2 libodbcinst2 libogdi4.1 libole-storage-lite-perl libopenjp2-7 libpackage-stash-perl libpackage-stash-xs-perl libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl libparse-recdescent-perl libpathplan4 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpcsclite1 libperl5.40 libpixman-1-0 libpkgconf3 libpng-dev libpng-tools libpng16-16t64 libpoppler140 libpostscript-perl libpq5 libproc2-0 libproj25 libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libqhull-r8.0 libquadmath0 libraqm0 librav1e0.7 libreadline-dev libreadline8t64 libreadonly-perl libref-util-perl libref-util-xs-perl librole-tiny-perl librsvg2-2 librsvg2-common librtmp1 librttopo1 libruby libruby3.1t64 libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libset-object-perl libset-scalar-perl libsframe1 libsharpyuv0 libsigsegv2 libsm6 libsnappy1v5 libsoap-lite-perl libsort-naturally-perl libspatialite8t64 libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsqlite3-0 libssh2-1t64 libstatistics-descriptive-perl libstdc++-14-dev libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libsub-uplevel-perl libsvg-graph-perl libsvg-perl libsvtav1enc2 libsystemd-shared libsz2 libtask-weaken-perl libtcl8.6 libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-requiresinternet-perl libtest-warn-perl libtext-csv-perl libtext-csv-xs-perl libtext-diff-perl libtext-iconv-perl libthai-data libthai0 libtie-ixhash-perl libtiff6 libtimedate-perl libtirpc-common libtirpc-dev libtirpc3t64 libtk8.6 libtree-dagnode-perl libtry-tiny-perl libtsan2 libtype-tiny-perl libtype-tiny-xs-perl libubsan1 libunicode-map-perl liburi-perl liburiparser1 libuv1t64 libvariable-magic-perl libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-protocol-perl libx11-xcb1 libx265-209 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces-c3.2t64 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxkbfile1 libxml-dom-perl libxml-dom-xpath-perl libxml-filter-buffertext-perl libxml-libxml-perl libxml-libxslt-perl libxml-namespacesupport-perl libxml-parser-perl libxml-perl libxml-regexp-perl libxml-sax-base-perl libxml-sax-expat-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libxml-xpath-perl libxml-xpathengine-perl libxml2 libxmlrpc-lite-perl libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxstring-perl libxt6t64 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 libyaml-0-2 libyaml-libyaml-perl libyaml-perl libyuv0 libz3-4 linux-libc-dev linux-sysctl-defaults luit lynx lynx-common mafft mailcap make manpages manpages-dev maq mariadb-common med-config media-types menu mesa-libgallium mesa-vulkan-drivers mummer muscle mustang mysql-common ncbi-blast+ ncbi-blast+-legacy ncbi-data ncoils netbase openjdk-21-jdk-headless openjdk-21-jre openjdk-21-jre-headless openssl pal2nal paml patch perl perl-doc perl-modules-5.40 perl-openssl-defaults perl-tk phylip pinentry-curses pkgconf pkgconf-bin poa poppler-data prank primer3 probalign probcons procps proda proj-bin proj-data psmisc publicsuffix python-matplotlib-data python3 python3-appdirs python3-attr python3-autocommand python3-brotli python3-bs4 python3-chardet python3-contourpy python3-cssselect python3-cycler python3-dateutil python3-decorator python3-fonttools python3-fs python3-gdal python3-html5lib python3-inflect python3-jaraco.context python3-jaraco.functools python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib python3-minimal python3-more-itertools python3-mpmath python3-networkx python3-numpy python3-olefile python3-packaging python3-pil python3-pil.imagetk python3-pkg-resources python3-pydot python3-pygraphviz python3-pyparsing python3-pysam python3-scipy python3-soupsieve python3-sympy python3-tk python3-typeguard python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2 python3-webencodings python3-yaml python3.12 python3.12-minimal python3.12-tk python3.13-tk r-base-core r-base-dev r-cran-boot r-cran-class r-cran-cluster r-cran-codetools r-cran-foreign r-cran-kernsmooth r-cran-lattice r-cran-mass r-cran-matrix r-cran-mgcv r-cran-nlme r-cran-nnet r-cran-rpart r-cran-spatial r-cran-survival r-doc-html r-recommended rake raxml readline-common rpcsvc-proto ruby ruby-net-telnet ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration samtools sensible-utils shared-mime-info sim4 smalt systemd systemd-cryptsetup systemd-sysv systemd-timesyncd t-coffee tk8.6-blt2.5 tm-align trimmomatic ucf unicode-data unixodbc-common unzip wise wise-data x11-common x11-utils x11-xserver-utils xauth xdg-user-dirs xdg-utils xfonts-encodings xfonts-utils xkb-data xz-utils zip zlib1g-dev zutty 0 upgraded, 768 newly installed, 0 to remove and 0 not upgraded. Need to get 650 MB of archives. After this operation, 2416 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 libapparmor1 amd64 3.1.7-1+b3 [42.1 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libsystemd-shared amd64 257~rc3-1 [2136 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 systemd amd64 257~rc3-1 [3608 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 systemd-sysv amd64 257~rc3-1 [59.5 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libdbus-1-3 amd64 1.14.10-6 [203 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 dbus-bin amd64 1.14.10-6 [106 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 dbus-session-bus-common all 1.14.10-6 [79.2 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 dbus-daemon amd64 1.14.10-6 [185 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 adduser all 3.137 [140 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 dbus-system-bus-common all 1.14.10-6 [80.2 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 dbus amd64 1.14.10-6 [98.5 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 fonts-lato all 2.015-1 [2780 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libmpfr6 amd64 4.2.1-1+b2 [724 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-5 [69.3 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libsigsegv2 amd64 2.14-1+b2 [34.4 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 gawk amd64 1:5.2.1-2+b1 [674 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 liblocale-gettext-perl amd64 1.07-7+b1 [15.3 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 poppler-data all 0.4.12-1 [1601 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.8-1 [815 kB] Get:22 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.8-1 [2163 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5-2+b1 [136 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:28 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:30 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.8-1 [1970 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.8-1 [677 kB] Get:38 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get:39 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:43 http://deb.debian.org/debian trixie/main amd64 bzip2 amd64 1.0.8-6 [40.5 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 ca-certificates all 20240203 [158 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 krb5-locales all 1.21.3-3 [101 kB] Get:50 http://deb.debian.org/debian trixie/main amd64 libnss-systemd amd64 257~rc3-1 [214 kB] Get:51 http://deb.debian.org/debian trixie/main amd64 libpam-systemd amd64 257~rc3-1 [291 kB] Get:52 http://deb.debian.org/debian trixie/main amd64 manpages all 6.9.1-1 [1393 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 perl-modules-5.40 all 5.40.0-8 [3015 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libgdbm6t64 amd64 1.24-2 [75.2 kB] Get:55 http://deb.debian.org/debian trixie/main amd64 libgdbm-compat4t64 amd64 1.24-2 [50.3 kB] Get:56 http://deb.debian.org/debian trixie/main amd64 libperl5.40 amd64 5.40.0-8 [4320 kB] Get:57 http://deb.debian.org/debian trixie/main amd64 perl amd64 5.40.0-8 [267 kB] Get:58 http://deb.debian.org/debian trixie/main amd64 systemd-timesyncd amd64 257~rc3-1 [87.9 kB] Get:59 http://deb.debian.org/debian trixie/main amd64 ucf all 3.0045 [45.2 kB] Get:60 http://deb.debian.org/debian trixie/main amd64 xz-utils amd64 5.6.3-1+b1 [542 kB] Get:61 http://deb.debian.org/debian trixie/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get:62 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14.2.0-8 [9280 B] Get:63 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1501 kB] Get:64 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get:65 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get:66 http://deb.debian.org/debian trixie/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get:67 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get:68 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get:69 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get:70 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get:71 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get:72 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get:73 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get:74 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:75 http://deb.debian.org/debian trixie/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1+b1 [141 kB] Get:76 http://deb.debian.org/debian trixie/main amd64 gtk-update-icon-cache amd64 4.16.7+ds-1 [50.2 kB] Get:77 http://deb.debian.org/debian trixie/main amd64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get:78 http://deb.debian.org/debian trixie/main amd64 adwaita-icon-theme all 47.0-2 [463 kB] Get:79 http://deb.debian.org/debian trixie/main amd64 alsa-topology-conf all 1.2.5.1-3 [15.3 kB] Get:80 http://deb.debian.org/debian trixie/main amd64 libasound2-data all 1.2.12-1 [21.0 kB] Get:81 http://deb.debian.org/debian trixie/main amd64 libasound2t64 amd64 1.2.12-1+b1 [371 kB] Get:82 http://deb.debian.org/debian trixie/main amd64 alsa-ucm-conf all 1.2.12-1 [70.5 kB] Get:83 http://deb.debian.org/debian trixie/main amd64 amap-align amd64 2.2+git20080214.600fc29+dfsg-2 [132 kB] Get:84 http://deb.debian.org/debian trixie/main amd64 libapr1t64 amd64 1.7.5-1 [104 kB] Get:85 http://deb.debian.org/debian trixie/main amd64 libaprutil1t64 amd64 1.6.3-3 [89.3 kB] Get:86 http://deb.debian.org/debian trixie/main amd64 libaprutil1-dbd-sqlite3 amd64 1.6.3-3 [13.9 kB] Get:87 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:88 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:89 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get:90 http://deb.debian.org/debian trixie/main amd64 libaprutil1-ldap amd64 1.6.3-3 [12.1 kB] Get:91 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get:92 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get:93 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:94 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:95 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:96 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get:97 http://deb.debian.org/debian trixie/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Get:98 http://deb.debian.org/debian trixie/main amd64 liblua5.4-0 amd64 5.4.7-1+b1 [147 kB] Get:99 http://deb.debian.org/debian trixie/main amd64 apache2-bin amd64 2.4.62-3 [1394 kB] Get:100 http://deb.debian.org/debian trixie/main amd64 at-spi2-common all 2.54.0-1 [170 kB] Get:101 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get:102 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get:103 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get:104 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get:105 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get:106 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get:107 http://deb.debian.org/debian trixie/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get:108 http://deb.debian.org/debian trixie/main amd64 libatspi2.0-0t64 amd64 2.54.0-1 [76.4 kB] Get:109 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get:110 http://deb.debian.org/debian trixie/main amd64 libxtst6 amd64 2:1.2.3-1.1+b2 [25.9 kB] Get:111 http://deb.debian.org/debian trixie/main amd64 dbus-user-session amd64 1.14.10-6 [79.0 kB] Get:112 http://deb.debian.org/debian trixie/main amd64 libdconf1 amd64 0.40.0-4+b3 [41.9 kB] Get:113 http://deb.debian.org/debian trixie/main amd64 dconf-service amd64 0.40.0-4+b3 [32.6 kB] Get:114 http://deb.debian.org/debian trixie/main amd64 dconf-gsettings-backend amd64 0.40.0-4+b3 [28.8 kB] Get:115 http://deb.debian.org/debian trixie/main amd64 gsettings-desktop-schemas all 47.1-1 [689 kB] Get:116 http://deb.debian.org/debian trixie/main amd64 at-spi2-core amd64 2.54.0-1 [61.2 kB] Get:117 http://deb.debian.org/debian trixie/main amd64 binutils-common amd64 2.43.50.20241204-2 [2629 kB] Get:118 http://deb.debian.org/debian trixie/main amd64 libsframe1 amd64 2.43.50.20241204-2 [77.4 kB] Get:119 http://deb.debian.org/debian trixie/main amd64 libbinutils amd64 2.43.50.20241204-2 [532 kB] Get:120 http://deb.debian.org/debian trixie/main amd64 libctf-nobfd0 amd64 2.43.50.20241204-2 [155 kB] Get:121 http://deb.debian.org/debian trixie/main amd64 libctf0 amd64 2.43.50.20241204-2 [88.5 kB] Get:122 http://deb.debian.org/debian trixie/main amd64 libgprofng0 amd64 2.43.50.20241204-2 [809 kB] Get:123 http://deb.debian.org/debian trixie/main amd64 binutils-x86-64-linux-gnu amd64 2.43.50.20241204-2 [2273 kB] Get:124 http://deb.debian.org/debian trixie/main amd64 binutils amd64 2.43.50.20241204-2 [68.2 kB] Get:125 http://deb.debian.org/debian trixie/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:126 http://deb.debian.org/debian trixie/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:127 http://deb.debian.org/debian trixie/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:128 http://deb.debian.org/debian trixie/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:129 http://deb.debian.org/debian trixie/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:130 http://deb.debian.org/debian trixie/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:131 http://deb.debian.org/debian trixie/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get:132 http://deb.debian.org/debian trixie/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:133 http://deb.debian.org/debian trixie/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:134 http://deb.debian.org/debian trixie/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:135 http://deb.debian.org/debian trixie/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] Get:136 http://deb.debian.org/debian trixie/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:137 http://deb.debian.org/debian trixie/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:138 http://deb.debian.org/debian trixie/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:139 http://deb.debian.org/debian trixie/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get:140 http://deb.debian.org/debian trixie/main amd64 bioperl all 1.7.8-1 [246 kB] Get:141 http://deb.debian.org/debian trixie/main amd64 libio-pty-perl amd64 1:1.20-1+b2 [34.3 kB] Get:142 http://deb.debian.org/debian trixie/main amd64 libipc-run-perl all 20231003.0-2 [101 kB] Get:143 http://deb.debian.org/debian trixie/main amd64 libfile-sort-perl all 1.01-3 [21.3 kB] Get:144 http://deb.debian.org/debian trixie/main amd64 libbio-perl-run-perl all 1.7.3-13 [528 kB] Get:145 http://deb.debian.org/debian trixie/main amd64 libfile-slurp-tiny-perl all 0.004-2 [7592 B] Get:146 http://deb.debian.org/debian trixie/main amd64 libtree-dagnode-perl all 1.32-1 [61.7 kB] Get:147 http://deb.debian.org/debian trixie/main amd64 liburi-perl all 5.30-1 [105 kB] Get:148 http://deb.debian.org/debian trixie/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:149 http://deb.debian.org/debian trixie/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:150 http://deb.debian.org/debian trixie/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:151 http://deb.debian.org/debian trixie/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:152 http://deb.debian.org/debian trixie/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:153 http://deb.debian.org/debian trixie/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get:154 http://deb.debian.org/debian trixie/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:155 http://deb.debian.org/debian trixie/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get:156 http://deb.debian.org/debian trixie/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:157 http://deb.debian.org/debian trixie/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:158 http://deb.debian.org/debian trixie/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:159 http://deb.debian.org/debian trixie/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:160 http://deb.debian.org/debian trixie/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:161 http://deb.debian.org/debian trixie/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:162 http://deb.debian.org/debian trixie/main amd64 libnet-ssleay-perl amd64 1.94-2 [339 kB] Get:163 http://deb.debian.org/debian trixie/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:164 http://deb.debian.org/debian trixie/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:165 http://deb.debian.org/debian trixie/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:166 http://deb.debian.org/debian trixie/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:167 http://deb.debian.org/debian trixie/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:168 http://deb.debian.org/debian trixie/main amd64 libwww-perl all 6.77-1 [183 kB] Get:169 http://deb.debian.org/debian trixie/main amd64 libxml-parser-perl amd64 2.47-1+b3 [198 kB] Get:170 http://deb.debian.org/debian trixie/main amd64 libxml-perl all 0.08-4 [93.0 kB] Get:171 http://deb.debian.org/debian trixie/main amd64 libxml-regexp-perl all 0.04-1.1 [7500 B] Get:172 http://deb.debian.org/debian trixie/main amd64 libxml-dom-perl all 1.46-2 [152 kB] Get:173 http://deb.debian.org/debian trixie/main amd64 libxml-xpathengine-perl all 0.14-2 [33.5 kB] Get:174 http://deb.debian.org/debian trixie/main amd64 libxml-dom-xpath-perl all 0.14-4 [9352 B] Get:175 http://deb.debian.org/debian trixie/main amd64 libbio-featureio-perl all 1.6.905-2 [53.2 kB] Get:176 http://deb.debian.org/debian trixie/main amd64 libxml-twig-perl all 1:3.52-3 [177 kB] Get:177 http://deb.debian.org/debian trixie/main amd64 libxml-writer-perl all 0.900-2 [26.8 kB] Get:178 http://deb.debian.org/debian trixie/main amd64 libbio-variation-perl all 1.7.5-3 [72.6 kB] Get:179 http://deb.debian.org/debian trixie/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:180 http://deb.debian.org/debian trixie/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:181 http://deb.debian.org/debian trixie/main amd64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get:182 http://deb.debian.org/debian trixie/main amd64 libbio-cluster-perl all 1.7.3-6 [53.3 kB] Get:183 http://deb.debian.org/debian trixie/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] Get:184 http://deb.debian.org/debian trixie/main amd64 libbio-asn1-entrezgene-perl all 1.730-3 [46.3 kB] Get:185 http://deb.debian.org/debian trixie/main amd64 libtext-csv-perl all 2.04-1 [112 kB] Get:186 http://deb.debian.org/debian trixie/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b1 [314 kB] Get:187 http://deb.debian.org/debian trixie/main amd64 libxml-sax-expat-perl all 0.51-2 [11.1 kB] Get:188 http://deb.debian.org/debian trixie/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:189 http://deb.debian.org/debian trixie/main amd64 libbio-eutilities-perl all 1.77-2 [124 kB] Get:190 http://deb.debian.org/debian trixie/main amd64 libbio-tools-run-remoteblast-perl all 1.7.3-3 [17.5 kB] Get:191 http://deb.debian.org/debian trixie/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:192 http://deb.debian.org/debian trixie/main amd64 libfcgi0t64 amd64 2.4.2-2.1+b1 [24.7 kB] Get:193 http://deb.debian.org/debian trixie/main amd64 libfcgi-perl amd64 0.82+ds-3+b2 [25.3 kB] Get:194 http://deb.debian.org/debian trixie/main amd64 libhttp-daemon-perl all 6.16-1 [23.5 kB] Get:195 http://deb.debian.org/debian trixie/main amd64 libio-sessiondata-perl all 1.03-3 [6316 B] Get:196 http://deb.debian.org/debian trixie/main amd64 libio-stringy-perl all 2.113-2 [48.3 kB] Get:197 http://deb.debian.org/debian trixie/main amd64 libconvert-binhex-perl all 1.125-3 [27.4 kB] Get:198 http://deb.debian.org/debian trixie/main amd64 libnet-smtp-ssl-perl all 1.04-2 [6548 B] Get:199 http://deb.debian.org/debian trixie/main amd64 libmailtools-perl all 2.22-1 [88.8 kB] Get:200 http://deb.debian.org/debian trixie/main amd64 libmime-tools-perl all 5.515-1 [203 kB] Get:201 http://deb.debian.org/debian trixie/main amd64 libtask-weaken-perl all 1.06-2 [9364 B] Get:202 http://deb.debian.org/debian trixie/main amd64 libsoap-lite-perl all 1.27-3 [239 kB] Get:203 http://deb.debian.org/debian trixie/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get:204 http://deb.debian.org/debian trixie/main amd64 java-common all 0.76 [6776 B] Get:205 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get:206 http://deb.debian.org/debian trixie/main amd64 libnspr4 amd64 2:4.36-1 [110 kB] Get:207 http://deb.debian.org/debian trixie/main amd64 libnss3 amd64 2:3.106-1 [1392 kB] Get:208 http://deb.debian.org/debian trixie/main amd64 libpcsclite1 amd64 2.3.0-3 [55.8 kB] Get:209 http://deb.debian.org/debian trixie/main amd64 openjdk-21-jre-headless amd64 21.0.5+11-1 [41.8 MB] Get:210 http://deb.debian.org/debian trixie/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get:211 http://deb.debian.org/debian trixie/main amd64 openjdk-21-jdk-headless amd64 21.0.5+11-1 [82.8 MB] Get:212 http://deb.debian.org/debian trixie/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B] Get:213 http://deb.debian.org/debian trixie/main amd64 bioperl-run all 1.7.3-13 [36.4 kB] Get:214 http://deb.debian.org/debian trixie/main amd64 menu amd64 2.1.50 [346 kB] Get:215 http://deb.debian.org/debian trixie/main amd64 blends-common all 0.7.7 [14.8 kB] Get:216 http://deb.debian.org/debian trixie/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] Get:217 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get:218 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:219 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:220 http://deb.debian.org/debian trixie/main amd64 fonts-liberation all 1:2.1.5-3 [1475 kB] Get:221 http://deb.debian.org/debian trixie/main amd64 libfontenc1 amd64 1:1.1.8-1+b1 [23.3 kB] Get:222 http://deb.debian.org/debian trixie/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get:223 http://deb.debian.org/debian trixie/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get:224 http://deb.debian.org/debian trixie/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get:225 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get:226 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get:227 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB] Get:228 http://deb.debian.org/debian trixie/main amd64 libxft2 amd64 2.3.6-1+b2 [54.5 kB] Get:229 http://deb.debian.org/debian trixie/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] Get:230 http://deb.debian.org/debian trixie/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] Get:231 http://deb.debian.org/debian trixie/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get:232 http://deb.debian.org/debian trixie/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get:233 http://deb.debian.org/debian trixie/main amd64 libc-dev-bin amd64 2.40-4 [52.0 kB] Get:234 http://deb.debian.org/debian trixie/main amd64 linux-libc-dev all 6.11.10-1 [2461 kB] Get:235 http://deb.debian.org/debian trixie/main amd64 libcrypt-dev amd64 1:4.4.36-5 [118 kB] Get:236 http://deb.debian.org/debian trixie/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Get:237 http://deb.debian.org/debian trixie/main amd64 libc6-dev amd64 2.40-4 [1954 kB] Get:238 http://deb.debian.org/debian trixie/main amd64 libisl23 amd64 0.27-1 [659 kB] Get:239 http://deb.debian.org/debian trixie/main amd64 libmpc3 amd64 1.3.1-1+b3 [52.2 kB] Get:240 http://deb.debian.org/debian trixie/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8 [11.1 MB] Get:241 http://deb.debian.org/debian trixie/main amd64 cpp-14 amd64 14.2.0-8 [1276 B] Get:242 http://deb.debian.org/debian trixie/main amd64 cpp-x86-64-linux-gnu amd64 4:14.2.0-1 [4840 B] Get:243 http://deb.debian.org/debian trixie/main amd64 cpp amd64 4:14.2.0-1 [1568 B] Get:244 http://deb.debian.org/debian trixie/main amd64 libcc1-0 amd64 14.2.0-8 [42.8 kB] Get:245 http://deb.debian.org/debian trixie/main amd64 libgomp1 amd64 14.2.0-8 [137 kB] Get:246 http://deb.debian.org/debian trixie/main amd64 libitm1 amd64 14.2.0-8 [25.9 kB] Get:247 http://deb.debian.org/debian trixie/main amd64 libasan8 amd64 14.2.0-8 [2729 kB] Get:248 http://deb.debian.org/debian trixie/main amd64 liblsan0 amd64 14.2.0-8 [1205 kB] Get:249 http://deb.debian.org/debian trixie/main amd64 libtsan2 amd64 14.2.0-8 [2461 kB] Get:250 http://deb.debian.org/debian trixie/main amd64 libubsan1 amd64 14.2.0-8 [1075 kB] Get:251 http://deb.debian.org/debian trixie/main amd64 libhwasan0 amd64 14.2.0-8 [1489 kB] Get:252 http://deb.debian.org/debian trixie/main amd64 libquadmath0 amd64 14.2.0-8 [145 kB] Get:253 http://deb.debian.org/debian trixie/main amd64 libgcc-14-dev amd64 14.2.0-8 [2674 kB] Get:254 http://deb.debian.org/debian trixie/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8 [21.4 MB] Get:255 http://deb.debian.org/debian trixie/main amd64 gcc-14 amd64 14.2.0-8 [530 kB] Get:256 http://deb.debian.org/debian trixie/main amd64 gcc-x86-64-linux-gnu amd64 4:14.2.0-1 [1436 B] Get:257 http://deb.debian.org/debian trixie/main amd64 gcc amd64 4:14.2.0-1 [5136 B] Get:258 http://deb.debian.org/debian trixie/main amd64 libstdc++-14-dev amd64 14.2.0-8 [2369 kB] Get:259 http://deb.debian.org/debian trixie/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8 [12.1 MB] Get:260 http://deb.debian.org/debian trixie/main amd64 g++-14 amd64 14.2.0-8 [20.2 kB] Get:261 http://deb.debian.org/debian trixie/main amd64 g++-x86-64-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:262 http://deb.debian.org/debian trixie/main amd64 g++ amd64 4:14.2.0-1 [1344 B] Get:263 http://deb.debian.org/debian trixie/main amd64 make amd64 4.3-4.1 [396 kB] Get:264 http://deb.debian.org/debian trixie/main amd64 libdpkg-perl all 1.22.11 [644 kB] Get:265 http://deb.debian.org/debian trixie/main amd64 patch amd64 2.7.6-7 [128 kB] Get:266 http://deb.debian.org/debian trixie/main amd64 dpkg-dev all 1.22.11 [1332 kB] Get:267 http://deb.debian.org/debian trixie/main amd64 build-essential amd64 12.12 [4624 B] Get:268 http://deb.debian.org/debian trixie/main amd64 bwa amd64 0.7.18-1 [212 kB] Get:269 http://deb.debian.org/debian trixie/main amd64 bzip2-doc all 1.0.8-6 [505 kB] Get:270 http://deb.debian.org/debian trixie/main amd64 libargtable2-0 amd64 13-3 [18.3 kB] Get:271 http://deb.debian.org/debian trixie/main amd64 clustalo amd64 1.2.4-8 [267 kB] Get:272 http://deb.debian.org/debian trixie/main amd64 clustalw amd64 2.1+lgpl-7 [282 kB] Get:273 http://deb.debian.org/debian trixie/main amd64 libatk1.0-0t64 amd64 2.54.0-1 [51.2 kB] Get:274 http://deb.debian.org/debian trixie/main amd64 libatk-bridge2.0-0t64 amd64 2.54.0-1 [67.6 kB] Get:275 http://deb.debian.org/debian trixie/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get:276 http://deb.debian.org/debian trixie/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get:277 http://deb.debian.org/debian trixie/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get:278 http://deb.debian.org/debian trixie/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get:279 http://deb.debian.org/debian trixie/main amd64 libcairo-gobject2 amd64 1.18.2-2 [130 kB] Get:280 http://deb.debian.org/debian trixie/main amd64 libcloudproviders0 amd64 0.3.6-1+b1 [29.2 kB] Get:281 http://deb.debian.org/debian trixie/main amd64 libcolord2 amd64 1.4.7-1+b2 [140 kB] Get:282 http://deb.debian.org/debian trixie/main amd64 libavahi-common-data amd64 0.8-15 [112 kB] Get:283 http://deb.debian.org/debian trixie/main amd64 libavahi-common3 amd64 0.8-15 [44.1 kB] Get:284 http://deb.debian.org/debian trixie/main amd64 libavahi-client3 amd64 0.8-15 [48.1 kB] Get:285 http://deb.debian.org/debian trixie/main amd64 libcups2t64 amd64 2.4.10-2 [251 kB] Get:286 http://deb.debian.org/debian trixie/main amd64 libepoxy0 amd64 1.5.10-2 [193 kB] Get:287 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get:288 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get:289 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB] Get:290 http://deb.debian.org/debian trixie/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB] Get:291 http://deb.debian.org/debian trixie/main amd64 libthai-data all 0.1.29-2 [168 kB] Get:292 http://deb.debian.org/debian trixie/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get:293 http://deb.debian.org/debian trixie/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get:294 http://deb.debian.org/debian trixie/main amd64 libpango-1.0-0 amd64 1.55.0+ds-3 [225 kB] Get:295 http://deb.debian.org/debian trixie/main amd64 libpangoft2-1.0-0 amd64 1.55.0+ds-3 [54.6 kB] Get:296 http://deb.debian.org/debian trixie/main amd64 libpangocairo-1.0-0 amd64 1.55.0+ds-3 [35.4 kB] Get:297 http://deb.debian.org/debian trixie/main amd64 libwayland-client0 amd64 1.23.0-1+b1 [26.6 kB] Get:298 http://deb.debian.org/debian trixie/main amd64 libwayland-cursor0 amd64 1.23.0-1+b1 [11.7 kB] Get:299 http://deb.debian.org/debian trixie/main amd64 libwayland-egl1 amd64 1.23.0-1+b1 [5664 B] Get:300 http://deb.debian.org/debian trixie/main amd64 libxcomposite1 amd64 1:0.4.6-1 [16.3 kB] Get:301 http://deb.debian.org/debian trixie/main amd64 libxfixes3 amd64 1:6.0.0-2+b2 [20.3 kB] Get:302 http://deb.debian.org/debian trixie/main amd64 libxcursor1 amd64 1:1.2.2-1+b1 [37.6 kB] Get:303 http://deb.debian.org/debian trixie/main amd64 libxdamage1 amd64 1:1.1.6-1+b2 [15.5 kB] Get:304 http://deb.debian.org/debian trixie/main amd64 libxinerama1 amd64 2:1.1.4-3+b2 [16.0 kB] Get:305 http://deb.debian.org/debian trixie/main amd64 xkb-data all 2.42-1 [790 kB] Get:306 http://deb.debian.org/debian trixie/main amd64 libxkbcommon0 amd64 1.6.0-1+b2 [111 kB] Get:307 http://deb.debian.org/debian trixie/main amd64 libxrandr2 amd64 2:1.5.4-1+b1 [36.3 kB] Get:308 http://deb.debian.org/debian trixie/main amd64 libgtk-3-common all 3.24.43-4 [4657 kB] Get:309 http://deb.debian.org/debian trixie/main amd64 libgtk-3-0t64 amd64 3.24.43-4 [2754 kB] Get:310 http://deb.debian.org/debian trixie/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Get:311 http://deb.debian.org/debian trixie/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get:312 http://deb.debian.org/debian trixie/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get:313 http://deb.debian.org/debian trixie/main amd64 libglapi-mesa amd64 24.2.8-1 [38.0 kB] Get:314 http://deb.debian.org/debian trixie/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [241 kB] Get:315 http://deb.debian.org/debian trixie/main amd64 libxcb-dri2-0 amd64 1.17.0-2+b1 [107 kB] Get:316 http://deb.debian.org/debian trixie/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Get:317 http://deb.debian.org/debian trixie/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Get:318 http://deb.debian.org/debian trixie/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Get:319 http://deb.debian.org/debian trixie/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Get:320 http://deb.debian.org/debian trixie/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Get:321 http://deb.debian.org/debian trixie/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Get:322 http://deb.debian.org/debian trixie/main amd64 libxshmfence1 amd64 1.3-1+b2 [8848 B] Get:323 http://deb.debian.org/debian trixie/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b3 [19.3 kB] Get:324 http://deb.debian.org/debian trixie/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get:325 http://deb.debian.org/debian trixie/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get:326 http://deb.debian.org/debian trixie/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB] Get:327 http://deb.debian.org/debian trixie/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB] Get:328 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:329 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get:330 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get:331 http://deb.debian.org/debian trixie/main amd64 libllvm19 amd64 1:19.1.4-1 [26.0 MB] Get:332 http://deb.debian.org/debian trixie/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get:333 http://deb.debian.org/debian trixie/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB] Get:334 http://deb.debian.org/debian trixie/main amd64 mesa-libgallium amd64 24.2.8-1 [9185 kB] Get:335 http://deb.debian.org/debian trixie/main amd64 libvulkan1 amd64 1.3.296.0-1 [126 kB] Get:336 http://deb.debian.org/debian trixie/main amd64 libwayland-server0 amd64 1.23.0-1+b1 [34.2 kB] Get:337 http://deb.debian.org/debian trixie/main amd64 libgbm1 amd64 24.2.8-1 [42.8 kB] Get:338 http://deb.debian.org/debian trixie/main amd64 libgl1-mesa-dri amd64 24.2.8-1 [43.9 kB] Get:339 http://deb.debian.org/debian trixie/main amd64 libglx-mesa0 amd64 24.2.8-1 [154 kB] Get:340 http://deb.debian.org/debian trixie/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Get:341 http://deb.debian.org/debian trixie/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Get:342 http://deb.debian.org/debian trixie/main amd64 libgif7 amd64 5.2.2-1+b1 [44.2 kB] Get:343 http://deb.debian.org/debian trixie/main amd64 openjdk-21-jre amd64 21.0.5+11-1 [205 kB] Get:344 http://deb.debian.org/debian trixie/main amd64 default-jre amd64 2:1.21-76 [1068 B] Get:345 http://deb.debian.org/debian trixie/main amd64 dialign-tx-data all 1.0.2-15 [862 kB] Get:346 http://deb.debian.org/debian trixie/main amd64 dialign-tx amd64 1.0.2-15 [87.6 kB] Get:347 http://deb.debian.org/debian trixie/main amd64 libassuan9 amd64 3.0.1-2 [60.6 kB] Get:348 http://deb.debian.org/debian trixie/main amd64 gpgconf amd64 2.2.45-2 [120 kB] Get:349 http://deb.debian.org/debian trixie/main amd64 libksba8 amd64 1.6.7-2+b1 [136 kB] Get:350 http://deb.debian.org/debian trixie/main amd64 libnpth0t64 amd64 1.6-3.1+b1 [18.2 kB] Get:351 http://deb.debian.org/debian trixie/main amd64 dirmngr amd64 2.2.45-2 [368 kB] Get:352 http://deb.debian.org/debian trixie/main amd64 libdevmapper1.02.1 amd64 2:1.02.201-1 [134 kB] Get:353 http://deb.debian.org/debian trixie/main amd64 dmsetup amd64 2:1.02.201-1 [82.0 kB] Get:354 http://deb.debian.org/debian trixie/main amd64 exonerate amd64 2.4.0-5+b1 [1963 kB] Get:355 http://deb.debian.org/debian trixie/main amd64 libfakeroot amd64 1.36-1 [29.1 kB] Get:356 http://deb.debian.org/debian trixie/main amd64 fakeroot amd64 1.36-1 [75.1 kB] Get:357 http://deb.debian.org/debian trixie/main amd64 libnghttp3-9 amd64 1.6.0-2 [64.8 kB] Get:358 http://deb.debian.org/debian trixie/main amd64 libngtcp2-16 amd64 1.9.1-1 [119 kB] Get:359 http://deb.debian.org/debian trixie/main amd64 libngtcp2-crypto-gnutls8 amd64 1.9.1-1 [18.5 kB] Get:360 http://deb.debian.org/debian trixie/main amd64 libcurl3t64-gnutls amd64 8.11.0-1 [359 kB] Get:361 http://deb.debian.org/debian trixie/main amd64 libhtscodecs2 amd64 1.6.1-1 [95.6 kB] Get:362 http://deb.debian.org/debian trixie/main amd64 libhts3t64 amd64 1.20+ds-2 [455 kB] Get:363 http://deb.debian.org/debian trixie/main amd64 libncurses6 amd64 6.5-2+b1 [105 kB] Get:364 http://deb.debian.org/debian trixie/main amd64 samtools amd64 1.20-3 [653 kB] Get:365 http://deb.debian.org/debian trixie/main amd64 fastaq all 3.17.0-9 [47.8 kB] Get:366 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-extra all 2.37-8 [1792 kB] Get:367 http://deb.debian.org/debian trixie/main amd64 fonts-droid-fallback all 1:8.1.0r7-1~1.gbp36536b [1807 kB] Get:368 http://deb.debian.org/debian trixie/main amd64 fonts-liberation-sans-narrow all 1:1.07.6-4 [182 kB] Get:369 http://deb.debian.org/debian trixie/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB] Get:370 http://deb.debian.org/debian trixie/main amd64 fonts-noto-mono all 20201225-2 [398 kB] Get:371 http://deb.debian.org/debian trixie/main amd64 mummer amd64 3.23+dfsg-8 [662 kB] Get:372 http://deb.debian.org/debian trixie/main amd64 fsa amd64 1.15.9+dfsg-6 [700 kB] Get:373 http://deb.debian.org/debian trixie/main amd64 gdal-data all 3.9.3+dfsg-1 [564 kB] Get:374 http://deb.debian.org/debian trixie/main amd64 gdal-plugins amd64 3.9.3+dfsg-1+b1 [343 kB] Get:375 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get:376 http://deb.debian.org/debian trixie/main amd64 libgfortran-14-dev amd64 14.2.0-8 [878 kB] Get:377 http://deb.debian.org/debian trixie/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-8 [11.7 MB] Get:378 http://deb.debian.org/debian trixie/main amd64 gfortran-14 amd64 14.2.0-8 [12.2 kB] Get:379 http://deb.debian.org/debian trixie/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.2.0-1 [1284 B] Get:380 http://deb.debian.org/debian trixie/main amd64 gfortran amd64 4:14.2.0-1 [1436 B] Get:381 http://deb.debian.org/debian trixie/main amd64 libgs-common all 10.04.0~dfsg-2 [148 kB] Get:382 http://deb.debian.org/debian trixie/main amd64 libgs10-common all 10.04.0~dfsg-2 [475 kB] Get:383 http://deb.debian.org/debian trixie/main amd64 libidn12 amd64 1.42-2+b1 [81.4 kB] Get:384 http://deb.debian.org/debian trixie/main amd64 libijs-0.35 amd64 0.35-15.1+b2 [15.2 kB] Get:385 http://deb.debian.org/debian trixie/main amd64 libjbig2dec0 amd64 0.20-1+b3 [65.1 kB] Get:386 http://deb.debian.org/debian trixie/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get:387 http://deb.debian.org/debian trixie/main amd64 libpaper1 amd64 1.1.29+b2 [12.8 kB] Get:388 http://deb.debian.org/debian trixie/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get:389 http://deb.debian.org/debian trixie/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get:390 http://deb.debian.org/debian trixie/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b1 [188 kB] Get:391 http://deb.debian.org/debian trixie/main amd64 libgs10 amd64 10.04.0~dfsg-2 [2562 kB] Get:392 http://deb.debian.org/debian trixie/main amd64 ghostscript amd64 10.04.0~dfsg-2 [50.6 kB] Get:393 http://deb.debian.org/debian trixie/main amd64 gnupg-l10n all 2.2.45-2 [705 kB] Get:394 http://deb.debian.org/debian trixie/main amd64 gpg amd64 2.2.45-2 [531 kB] Get:395 http://deb.debian.org/debian trixie/main amd64 pinentry-curses amd64 1.2.1-4+b1 [79.7 kB] Get:396 http://deb.debian.org/debian trixie/main amd64 gpg-agent amd64 2.2.45-2 [251 kB] Get:397 http://deb.debian.org/debian trixie/main amd64 gpgsm amd64 2.2.45-2 [255 kB] Get:398 http://deb.debian.org/debian trixie/main amd64 gnupg all 2.2.45-2 [376 kB] Get:399 http://deb.debian.org/debian trixie/main amd64 gpg-wks-client amd64 2.2.45-2 [102 kB] Get:400 http://deb.debian.org/debian trixie/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get:401 http://deb.debian.org/debian trixie/main amd64 libcdt5 amd64 2.42.4-2+b1 [40.5 kB] Get:402 http://deb.debian.org/debian trixie/main amd64 libcgraph6 amd64 2.42.4-2+b1 [64.2 kB] Get:403 http://deb.debian.org/debian trixie/main amd64 libaom3 amd64 3.11.0-1 [1879 kB] Get:404 http://deb.debian.org/debian trixie/main amd64 libdav1d7 amd64 1.5.0-1+b1 [550 kB] Get:405 http://deb.debian.org/debian trixie/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get:406 http://deb.debian.org/debian trixie/main amd64 libgav1-1 amd64 0.19.0-2+b2 [350 kB] Get:407 http://deb.debian.org/debian trixie/main amd64 librav1e0.7 amd64 0.7.1-7+b2 [936 kB] Get:408 http://deb.debian.org/debian trixie/main amd64 libsvtav1enc2 amd64 2.2.1+dfsg-2 [2173 kB] Get:409 http://deb.debian.org/debian trixie/main amd64 libyuv0 amd64 0.0.1898.20241125-1 [172 kB] Get:410 http://deb.debian.org/debian trixie/main amd64 libavif16 amd64 1.1.1-1 [117 kB] Get:411 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-dav1d amd64 1.19.3-1 [11.2 kB] Get:412 http://deb.debian.org/debian trixie/main amd64 libde265-0 amd64 1.0.15-1+b2 [189 kB] Get:413 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-libde265 amd64 1.19.3-1 [15.0 kB] Get:414 http://deb.debian.org/debian trixie/main amd64 libheif1 amd64 1.19.3-1 [489 kB] Get:415 http://deb.debian.org/debian trixie/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get:416 http://deb.debian.org/debian trixie/main amd64 libraqm0 amd64 0.10.1-1+b2 [14.1 kB] Get:417 http://deb.debian.org/debian trixie/main amd64 libxpm4 amd64 1:3.5.17-1+b2 [56.3 kB] Get:418 http://deb.debian.org/debian trixie/main amd64 libgd3 amd64 2.3.3-12+b1 [126 kB] Get:419 http://deb.debian.org/debian trixie/main amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2+b1 [160 kB] Get:420 http://deb.debian.org/debian trixie/main amd64 libltdl7 amd64 2.4.7-8 [393 kB] Get:421 http://deb.debian.org/debian trixie/main amd64 libpathplan4 amd64 2.42.4-2+b1 [42.8 kB] Get:422 http://deb.debian.org/debian trixie/main amd64 libgvc6 amd64 2.42.4-2+b1 [685 kB] Get:423 http://deb.debian.org/debian trixie/main amd64 libgvpr2 amd64 2.42.4-2+b1 [193 kB] Get:424 http://deb.debian.org/debian trixie/main amd64 liblab-gamut1 amd64 2.42.4-2+b1 [198 kB] Get:425 http://deb.debian.org/debian trixie/main amd64 libxmu6 amd64 2:1.1.3-3+b3 [58.8 kB] Get:426 http://deb.debian.org/debian trixie/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB] Get:427 http://deb.debian.org/debian trixie/main amd64 graphviz amd64 2.42.4-2+b1 [616 kB] Get:428 http://deb.debian.org/debian trixie/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] Get:429 http://deb.debian.org/debian trixie/main amd64 isympy-common all 1.13.3-1 [234 kB] Get:430 http://deb.debian.org/debian trixie/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get:431 http://deb.debian.org/debian trixie/main amd64 python3-sympy all 1.13.3-1 [4147 kB] Get:432 http://deb.debian.org/debian trixie/main amd64 isympy3 all 1.13.3-1 [6296 B] Get:433 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get:434 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get:435 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get:436 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get:437 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get:438 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get:439 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:440 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get:441 http://deb.debian.org/debian trixie/main amd64 python3-networkx all 3.2.1-5 [13.0 MB] Get:442 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get:443 http://deb.debian.org/debian trixie/main amd64 python3-pysam amd64 0.22.1+ds-2+b2 [4412 kB] Get:444 http://deb.debian.org/debian trixie/main amd64 kmc amd64 3.2.4+dfsg-1+b1 [1049 kB] Get:445 http://deb.debian.org/debian trixie/main amd64 libbambamc0 amd64 0.0.50-6+b2 [38.2 kB] Get:446 http://deb.debian.org/debian trixie/main amd64 smalt amd64 0.7.6-13 [115 kB] Get:447 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.0-4 [152 kB] Get:448 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] Get:449 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB] Get:450 http://deb.debian.org/debian trixie/main amd64 iva amd64 1.0.11+ds-6 [8582 kB] Get:451 http://deb.debian.org/debian trixie/main amd64 javascript-common all 11+nmu1 [6260 B] Get:452 http://deb.debian.org/debian trixie/main amd64 kalign amd64 1:3.4.0-1+b1 [137 kB] Get:453 http://deb.debian.org/debian trixie/main amd64 lagan amd64 2.0-10 [184 kB] Get:454 http://deb.debian.org/debian trixie/main amd64 liberror-perl all 0.17029-2 [29.0 kB] Get:455 http://deb.debian.org/debian trixie/main amd64 libipc-sharelite-perl amd64 0.17-5+b3 [23.1 kB] Get:456 http://deb.debian.org/debian trixie/main amd64 libcache-cache-perl all 1.08-3 [63.4 kB] Get:457 http://deb.debian.org/debian trixie/main amd64 libace-perl amd64 1.92-12+b1 [274 kB] Get:458 http://deb.debian.org/debian trixie/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get:459 http://deb.debian.org/debian trixie/main amd64 libalgorithm-diff-xs-perl amd64 0.04-8+b4 [11.5 kB] Get:460 http://deb.debian.org/debian trixie/main amd64 libalgorithm-merge-perl all 0.08-5 [11.8 kB] Get:461 http://deb.debian.org/debian trixie/main amd64 libalgorithm-munkres-perl all 0.08-5 [11.3 kB] Get:462 http://deb.debian.org/debian trixie/main amd64 libdevel-symdump-perl all 2.18-5 [15.8 kB] Get:463 http://deb.debian.org/debian trixie/main amd64 libapache2-mod-perl2 amd64 2.0.13-2+b1 [808 kB] Get:464 http://deb.debian.org/debian trixie/main amd64 libdbi-perl amd64 1.645-1+b1 [861 kB] Get:465 http://deb.debian.org/debian trixie/main amd64 libapache-dbi-perl all 1.12-3 [48.5 kB] Get:466 http://deb.debian.org/debian trixie/main amd64 libapache2-reload-perl all 0.14-1 [16.2 kB] Get:467 http://deb.debian.org/debian trixie/main amd64 libarpack2t64 amd64 3.9.1-1.2+b1 [104 kB] Get:468 http://deb.debian.org/debian trixie/main amd64 libarmadillo14 amd64 1:14.2.1+dfsg-1+b1 [102 kB] Get:469 http://deb.debian.org/debian trixie/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:470 http://deb.debian.org/debian trixie/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b4 [36.1 kB] Get:471 http://deb.debian.org/debian trixie/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get:472 http://deb.debian.org/debian trixie/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get:473 http://deb.debian.org/debian trixie/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB] Get:474 http://deb.debian.org/debian trixie/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get:475 http://deb.debian.org/debian trixie/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:476 http://deb.debian.org/debian trixie/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:477 http://deb.debian.org/debian trixie/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:478 http://deb.debian.org/debian trixie/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:479 http://deb.debian.org/debian trixie/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:480 http://deb.debian.org/debian trixie/main amd64 libexporter-tiny-perl all 1.006002-1 [38.7 kB] Get:481 http://deb.debian.org/debian trixie/main amd64 libtype-tiny-perl all 2.004000-1 [357 kB] Get:482 http://deb.debian.org/debian trixie/main amd64 libarray-compare-perl all 3.0.8-1 [14.9 kB] Get:483 http://deb.debian.org/debian trixie/main amd64 libxcb-shape0 amd64 1.17.0-2+b1 [106 kB] Get:484 http://deb.debian.org/debian trixie/main amd64 libxkbfile1 amd64 1:1.1.0-1+b2 [76.5 kB] Get:485 http://deb.debian.org/debian trixie/main amd64 libxmuu1 amd64 2:1.1.3-3+b3 [21.9 kB] Get:486 http://deb.debian.org/debian trixie/main amd64 libxv1 amd64 2:1.0.11-1.1+b2 [23.3 kB] Get:487 http://deb.debian.org/debian trixie/main amd64 libxxf86dga1 amd64 2:1.1.5-1+b2 [20.8 kB] Get:488 http://deb.debian.org/debian trixie/main amd64 x11-utils amd64 7.7+7 [182 kB] Get:489 http://deb.debian.org/debian trixie/main amd64 libatk-wrapper-java all 0.40.0-3 [63.4 kB] Get:490 http://deb.debian.org/debian trixie/main amd64 libatk-wrapper-java-jni amd64 0.40.0-3+b3 [53.6 kB] Get:491 http://deb.debian.org/debian trixie/main amd64 libauthen-sasl-perl all 2.1700-1 [44.8 kB] Get:492 http://deb.debian.org/debian trixie/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:493 http://deb.debian.org/debian trixie/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:494 http://deb.debian.org/debian trixie/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB] Get:495 http://deb.debian.org/debian trixie/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:496 http://deb.debian.org/debian trixie/main amd64 libcarp-clan-perl all 6.08-2 [14.1 kB] Get:497 http://deb.debian.org/debian trixie/main amd64 libbit-vector-perl amd64 7.4-3+b2 [141 kB] Get:498 http://deb.debian.org/debian trixie/main amd64 libblas-dev amd64 3.12.0-4 [161 kB] Get:499 http://deb.debian.org/debian trixie/main amd64 libsnappy1v5 amd64 1.2.1-1+b1 [29.6 kB] Get:500 http://deb.debian.org/debian trixie/main amd64 libblosc1 amd64 1.21.5+ds-1+b2 [49.5 kB] Get:501 http://deb.debian.org/debian trixie/main amd64 libbsd-resource-perl amd64 1.2911-2+b4 [31.9 kB] Get:502 http://deb.debian.org/debian trixie/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB] Get:503 http://deb.debian.org/debian trixie/main amd64 libcfitsio10t64 amd64 4.5.0-5 [575 kB] Get:504 http://deb.debian.org/debian trixie/main amd64 libcgi-pm-perl all 4.66-1 [217 kB] Get:505 http://deb.debian.org/debian trixie/main amd64 libcgi-fast-perl all 1:2.17-1 [11.8 kB] Get:506 http://deb.debian.org/debian trixie/main amd64 libconvert-binary-c-perl amd64 0.85-1+b1 [273 kB] Get:507 http://deb.debian.org/debian trixie/main amd64 libcrypt-rc4-perl all 2.02-5 [7480 B] Get:508 http://deb.debian.org/debian trixie/main amd64 libjson-c5 amd64 0.18+ds-1 [46.0 kB] Get:509 http://deb.debian.org/debian trixie/main amd64 libcryptsetup12 amd64 2:2.7.5-1 [253 kB] Get:510 http://deb.debian.org/debian trixie/main amd64 libdata-dump-perl all 1.25-1 [28.4 kB] Get:511 http://deb.debian.org/debian trixie/main amd64 libdate-calc-perl all 6.4-2 [191 kB] Get:512 http://deb.debian.org/debian trixie/main amd64 libdate-calc-xs-perl amd64 6.4-2+b4 [52.4 kB] Get:513 http://deb.debian.org/debian trixie/main amd64 libdate-manip-perl all 6.96-1 [908 kB] Get:514 http://deb.debian.org/debian trixie/main amd64 mysql-common all 5.8+1.1.1 [6784 B] Get:515 http://deb.debian.org/debian trixie/main amd64 mariadb-common all 1:11.4.3-1 [27.1 kB] Get:516 http://deb.debian.org/debian trixie/main amd64 libmariadb3 amd64 1:11.4.3-1 [181 kB] Get:517 http://deb.debian.org/debian trixie/main amd64 libdbd-mysql-perl amd64 4.052-1+b3 [114 kB] Get:518 http://deb.debian.org/debian trixie/main amd64 libpq5 amd64 17.2-1 [223 kB] Get:519 http://deb.debian.org/debian trixie/main amd64 libdbd-pg-perl amd64 3.18.0-1+b3 [210 kB] Get:520 http://deb.debian.org/debian trixie/main amd64 libdbd-sqlite3-perl amd64 1.76-1 [175 kB] Get:521 http://deb.debian.org/debian trixie/main amd64 libdeflate-dev amd64 1.22-1 [55.8 kB] Get:522 http://deb.debian.org/debian trixie/main amd64 libdigest-perl-md5-perl all 1.9-5 [11.7 kB] Get:523 http://deb.debian.org/debian trixie/main amd64 libegl-mesa0 amd64 24.2.8-1 [133 kB] Get:524 http://deb.debian.org/debian trixie/main amd64 libfcgi-bin amd64 2.4.2-2.1+b1 [11.8 kB] Get:525 http://deb.debian.org/debian trixie/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:526 http://deb.debian.org/debian trixie/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:527 http://deb.debian.org/debian trixie/main amd64 libfile-desktopentry-perl all 0.22-3 [17.6 kB] Get:528 http://deb.debian.org/debian trixie/main amd64 libfile-fcntllock-perl amd64 0.22-4+b4 [34.6 kB] Get:529 http://deb.debian.org/debian trixie/main amd64 libfile-mimeinfo-perl all 0.35-1 [44.4 kB] Get:530 http://deb.debian.org/debian trixie/main amd64 libfont-afm-perl all 1.20-4 [13.1 kB] Get:531 http://deb.debian.org/debian trixie/main amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1+b1 [53.3 kB] Get:532 http://deb.debian.org/debian trixie/main amd64 libfreexl1 amd64 2.0.0-1+b3 [40.0 kB] Get:533 http://deb.debian.org/debian trixie/main amd64 libfreezethaw-perl all 0.5001-3 [16.0 kB] Get:534 http://deb.debian.org/debian trixie/main amd64 libfyba0t64 amd64 4.1.1-11+b1 [113 kB] Get:535 http://deb.debian.org/debian trixie/main amd64 libgd-perl amd64 2.78-1+b3 [131 kB] Get:536 http://deb.debian.org/debian trixie/main amd64 libgeos3.13.0 amd64 3.13.0-1 [968 kB] Get:537 http://deb.debian.org/debian trixie/main amd64 libgeos-c1t64 amd64 3.13.0-1 [102 kB] Get:538 http://deb.debian.org/debian trixie/main amd64 proj-data all 9.5.1-1 [6284 kB] Get:539 http://deb.debian.org/debian trixie/main amd64 libproj25 amd64 9.5.1-1 [1420 kB] Get:540 http://deb.debian.org/debian trixie/main amd64 libgeotiff5 amd64 1.7.3-1+b1 [68.7 kB] Get:541 http://deb.debian.org/debian trixie/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get:542 http://deb.debian.org/debian trixie/main amd64 libhdf4-0-alt amd64 4.3.0-1+b1 [269 kB] Get:543 http://deb.debian.org/debian trixie/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-5+b1 [1254 kB] Get:544 http://deb.debian.org/debian trixie/main amd64 liburiparser1 amd64 0.9.8+dfsg-2 [45.5 kB] Get:545 http://deb.debian.org/debian trixie/main amd64 libkmlbase1t64 amd64 1.3.0-12+b1 [50.4 kB] Get:546 http://deb.debian.org/debian trixie/main amd64 libkmldom1t64 amd64 1.3.0-12+b1 [158 kB] Get:547 http://deb.debian.org/debian trixie/main amd64 libkmlengine1t64 amd64 1.3.0-12+b1 [80.2 kB] Get:548 http://deb.debian.org/debian trixie/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-5+b1 [64.2 kB] Get:549 http://deb.debian.org/debian trixie/main amd64 libnetcdf19t64 amd64 1:4.9.2-7 [477 kB] Get:550 http://deb.debian.org/debian trixie/main amd64 libodbc2 amd64 2.3.12-1+b3 [151 kB] Get:551 http://deb.debian.org/debian trixie/main amd64 unixodbc-common all 2.3.12-1 [8496 B] Get:552 http://deb.debian.org/debian trixie/main amd64 libodbcinst2 amd64 2.3.12-1+b3 [35.3 kB] Get:553 http://deb.debian.org/debian trixie/main amd64 libogdi4.1 amd64 4.1.1+ds-5 [217 kB] Get:554 http://deb.debian.org/debian trixie/main amd64 libgpgme11t64 amd64 1.24.0-2 [344 kB] Get:555 http://deb.debian.org/debian trixie/main amd64 libgpgmepp6t64 amd64 1.24.0-2 [339 kB] Get:556 http://deb.debian.org/debian trixie/main amd64 libpoppler140 amd64 24.08.0-3 [1965 kB] Get:557 http://deb.debian.org/debian trixie/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get:558 http://deb.debian.org/debian trixie/main amd64 librttopo1 amd64 1.1.0-3+b2 [179 kB] Get:559 http://deb.debian.org/debian trixie/main amd64 libspatialite8t64 amd64 5.1.0-3+b2 [1864 kB] Get:560 http://deb.debian.org/debian trixie/main amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3+b1 [900 kB] Get:561 http://deb.debian.org/debian trixie/main amd64 libgdal35 amd64 3.9.3+dfsg-1+b1 [9219 kB] Get:562 http://deb.debian.org/debian trixie/main amd64 libgdk-pixbuf2.0-bin amd64 2.42.12+dfsg-1+b1 [18.7 kB] Get:563 http://deb.debian.org/debian trixie/main amd64 libgles2 amd64 1.7.0-1+b2 [17.3 kB] Get:564 http://deb.debian.org/debian trixie/main amd64 libglib2.0-data all 2.82.2-3 [1275 kB] Get:565 http://deb.debian.org/debian trixie/main amd64 libgpm2 amd64 1.20.7-11+b1 [14.4 kB] Get:566 http://deb.debian.org/debian trixie/main amd64 libheap-perl all 0.80-5 [34.3 kB] Get:567 http://deb.debian.org/debian trixie/main amd64 libset-object-perl amd64 1.42-1+b5 [37.6 kB] Get:568 http://deb.debian.org/debian trixie/main amd64 libgraph-perl all 1:0.9729-1 [108 kB] Get:569 http://deb.debian.org/debian trixie/main amd64 libparse-recdescent-perl all 1.967015+dfsg-4 [147 kB] Get:570 http://deb.debian.org/debian trixie/main amd64 libxml-xpath-perl all 1.48-1 [71.0 kB] Get:571 http://deb.debian.org/debian trixie/main amd64 libgraphviz-perl all 2.24-1 [92.7 kB] Get:572 http://deb.debian.org/debian trixie/main amd64 libgtk-3-bin amd64 3.24.43-4 [85.5 kB] Get:573 http://deb.debian.org/debian trixie/main amd64 libgts-bin amd64 0.7.6+darcs121130-5.2+b1 [47.7 kB] Get:574 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-aomenc amd64 1.19.3-1 [21.7 kB] Get:575 http://deb.debian.org/debian trixie/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get:576 http://deb.debian.org/debian trixie/main amd64 libx265-209 amd64 3.6-3+b1 [1191 kB] Get:577 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-x265 amd64 1.19.3-1 [21.9 kB] Get:578 http://deb.debian.org/debian trixie/main amd64 libhtml-form-perl all 6.12-1 [32.3 kB] Get:579 http://deb.debian.org/debian trixie/main amd64 libhtml-format-perl all 2.16-2 [38.8 kB] Get:580 http://deb.debian.org/debian trixie/main amd64 libhtml-tableextract-perl all 2.15-2 [30.6 kB] Get:581 http://deb.debian.org/debian trixie/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB] Get:582 http://deb.debian.org/debian trixie/main amd64 libio-compress-brotli-perl amd64 0.004001-2+b3 [16.9 kB] Get:583 http://deb.debian.org/debian trixie/main amd64 libjbzip2-java all 0.9.1-8 [42.7 kB] Get:584 http://deb.debian.org/debian trixie/main amd64 libjcode-pm-perl amd64 2.06-1.1 [30.0 kB] Get:585 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] Get:586 http://deb.debian.org/debian trixie/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] Get:587 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:588 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:589 http://deb.debian.org/debian trixie/main amd64 libkmod2 amd64 33+20240816-2 [63.1 kB] Get:590 http://deb.debian.org/debian trixie/main amd64 liblapack-dev amd64 3.12.0-4 [4991 kB] Get:591 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get:592 http://deb.debian.org/debian trixie/main amd64 libldap-common all 2.5.18+dfsg-3 [32.0 kB] Get:593 http://deb.debian.org/debian trixie/main amd64 liblist-moreutils-xs-perl amd64 0.430-4+b2 [42.1 kB] Get:594 http://deb.debian.org/debian trixie/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:595 http://deb.debian.org/debian trixie/main amd64 liblmdb0 amd64 0.9.31-1+b2 [45.2 kB] Get:596 http://deb.debian.org/debian trixie/main amd64 liblzma-dev amd64 5.6.3-1+b1 [316 kB] Get:597 http://deb.debian.org/debian trixie/main amd64 libmath-derivative-perl all 1.01-3 [8060 B] Get:598 http://deb.debian.org/debian trixie/main amd64 libmath-spline-perl all 0.02-4 [6808 B] Get:599 http://deb.debian.org/debian trixie/main amd64 libmbedcrypto16 amd64 3.6.2-3 [355 kB] Get:600 http://deb.debian.org/debian trixie/main amd64 libmbedx509-7 amd64 3.6.2-3 [147 kB] Get:601 http://deb.debian.org/debian trixie/main amd64 libmbedtls21 amd64 3.6.2-3 [234 kB] Get:602 http://deb.debian.org/debian trixie/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:603 http://deb.debian.org/debian trixie/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:604 http://deb.debian.org/debian trixie/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB] Get:605 http://deb.debian.org/debian trixie/main amd64 libsub-name-perl amd64 0.27-1+b3 [12.5 kB] Get:606 http://deb.debian.org/debian trixie/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:607 http://deb.debian.org/debian trixie/main amd64 libncurses-dev amd64 6.5-2+b1 [351 kB] Get:608 http://deb.debian.org/debian trixie/main amd64 libnet-dbus-perl amd64 1.2.0-2+b3 [168 kB] Get:609 http://deb.debian.org/debian trixie/main amd64 libole-storage-lite-perl all 0.22-1 [22.8 kB] Get:610 http://deb.debian.org/debian trixie/main amd64 libpackage-stash-xs-perl amd64 0.30-1+b4 [20.9 kB] Get:611 http://deb.debian.org/debian trixie/main amd64 libpaper-utils amd64 1.1.29+b2 [9236 B] Get:612 http://deb.debian.org/debian trixie/main amd64 libpcre2-16-0 amd64 10.44-4 [261 kB] Get:613 http://deb.debian.org/debian trixie/main amd64 libpcre2-32-0 amd64 10.44-4 [248 kB] Get:614 http://deb.debian.org/debian trixie/main amd64 libpcre2-posix3 amd64 10.44-4 [60.3 kB] Get:615 http://deb.debian.org/debian trixie/main amd64 libpcre2-dev amd64 10.44-4 [790 kB] Get:616 http://deb.debian.org/debian trixie/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get:617 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get:618 http://deb.debian.org/debian trixie/main amd64 libpng-dev amd64 1.6.44-2 [366 kB] Get:619 http://deb.debian.org/debian trixie/main amd64 libpng-tools amd64 1.6.44-2 [129 kB] Get:620 http://deb.debian.org/debian trixie/main amd64 libpostscript-perl all 0.06-3.1 [26.0 kB] Get:621 http://deb.debian.org/debian trixie/main amd64 libreadline-dev amd64 8.2-5 [153 kB] Get:622 http://deb.debian.org/debian trixie/main amd64 libreadonly-perl all 2.050-3 [23.1 kB] Get:623 http://deb.debian.org/debian trixie/main amd64 libref-util-perl all 0.204-2 [17.4 kB] Get:624 http://deb.debian.org/debian trixie/main amd64 libref-util-xs-perl amd64 0.117-2+b4 [14.1 kB] Get:625 http://deb.debian.org/debian trixie/main amd64 librsvg2-2 amd64 2.59.1+dfsg-1 [1860 kB] Get:626 http://deb.debian.org/debian trixie/main amd64 librsvg2-common amd64 2.59.1+dfsg-1 [147 kB] Get:627 http://deb.debian.org/debian trixie/main amd64 rubygems-integration all 1.18 [6704 B] Get:628 http://deb.debian.org/debian trixie/main amd64 ruby3.1 amd64 3.1.2-8.4 [664 kB] Get:629 http://deb.debian.org/debian trixie/main amd64 ruby-rubygems all 3.4.20-1 [309 kB] Get:630 http://deb.debian.org/debian trixie/main amd64 ruby amd64 1:3.1+nmu1 [5584 B] Get:631 http://deb.debian.org/debian trixie/main amd64 rake all 13.2.1-1 [65.2 kB] Get:632 http://deb.debian.org/debian trixie/main amd64 ruby-net-telnet all 0.2.0-1 [13.1 kB] Get:633 http://deb.debian.org/debian trixie/main amd64 ruby-webrick all 1.8.1-1 [51.4 kB] Get:634 http://deb.debian.org/debian trixie/main amd64 ruby-xmlrpc all 0.3.3-2 [24.4 kB] Get:635 http://deb.debian.org/debian trixie/main amd64 ruby-sdbm amd64 1.0.0-5+b5 [15.6 kB] Get:636 http://deb.debian.org/debian trixie/main amd64 libyaml-0-2 amd64 0.2.5-1+b2 [52.7 kB] Get:637 http://deb.debian.org/debian trixie/main amd64 libruby3.1t64 amd64 3.1.2-8.4 [5411 kB] Get:638 http://deb.debian.org/debian trixie/main amd64 libruby amd64 1:3.1+nmu1 [4664 B] Get:639 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules amd64 2.1.28+dfsg1-8 [66.5 kB] Get:640 http://deb.debian.org/debian trixie/main amd64 libset-scalar-perl all 1.29-3 [32.1 kB] Get:641 http://deb.debian.org/debian trixie/main amd64 libsort-naturally-perl all 1.03-4 [13.1 kB] Get:642 http://deb.debian.org/debian trixie/main amd64 libspreadsheet-writeexcel-perl all 2.40-4 [503 kB] Get:643 http://deb.debian.org/debian trixie/main amd64 libunicode-map-perl amd64 0.112-13+b4 [144 kB] Get:644 http://deb.debian.org/debian trixie/main amd64 libspreadsheet-parseexcel-perl all 0.6600-1 [126 kB] Get:645 http://deb.debian.org/debian trixie/main amd64 libstatistics-descriptive-perl all 3.0801-1 [62.8 kB] Get:646 http://deb.debian.org/debian trixie/main amd64 libsvg-perl all 2.87-1 [64.3 kB] Get:647 http://deb.debian.org/debian trixie/main amd64 libsvg-graph-perl all 0.02-4 [105 kB] Get:648 http://deb.debian.org/debian trixie/main amd64 libtext-csv-xs-perl amd64 1.57-1 [134 kB] Get:649 http://deb.debian.org/debian trixie/main amd64 libtext-iconv-perl amd64 1.7-8+b4 [14.4 kB] Get:650 http://deb.debian.org/debian trixie/main amd64 libtie-ixhash-perl all 1.23-4 [11.7 kB] Get:651 http://deb.debian.org/debian trixie/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3+b1 [190 kB] Get:652 http://deb.debian.org/debian trixie/main amd64 libtype-tiny-xs-perl amd64 0.025-2+b1 [26.3 kB] Get:653 http://deb.debian.org/debian trixie/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] Get:654 http://deb.debian.org/debian trixie/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB] Get:655 http://deb.debian.org/debian trixie/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB] Get:656 http://deb.debian.org/debian trixie/main amd64 libx11-protocol-perl all 0.56-9 [120 kB] Get:657 http://deb.debian.org/debian trixie/main amd64 libxml-filter-buffertext-perl all 1.01-7 [7136 B] Get:658 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get:659 http://deb.debian.org/debian trixie/main amd64 libxml-libxslt-perl amd64 2.003000-2+b1 [47.9 kB] Get:660 http://deb.debian.org/debian trixie/main amd64 libxml-sax-writer-perl all 0.57-3 [19.6 kB] Get:661 http://deb.debian.org/debian trixie/main amd64 libxmlrpc-lite-perl all 0.717-5 [22.4 kB] Get:662 http://deb.debian.org/debian trixie/main amd64 libxstring-perl amd64 0.005-2+b4 [8076 B] Get:663 http://deb.debian.org/debian trixie/main amd64 libyaml-libyaml-perl amd64 0.902.0+ds-2+b1 [35.5 kB] Get:664 http://deb.debian.org/debian trixie/main amd64 libyaml-perl all 1.31-1 [64.8 kB] Get:665 http://deb.debian.org/debian trixie/main amd64 linux-sysctl-defaults all 4.10.1 [4904 B] Get:666 http://deb.debian.org/debian trixie/main amd64 luit amd64 2.0.20240910-1 [55.1 kB] Get:667 http://deb.debian.org/debian trixie/main amd64 lynx-common all 2.9.2-1 [1193 kB] Get:668 http://deb.debian.org/debian trixie/main amd64 lynx amd64 2.9.2-1 [641 kB] Get:669 http://deb.debian.org/debian trixie/main amd64 mafft amd64 7.505-1 [1078 kB] Get:670 http://deb.debian.org/debian trixie/main amd64 mailcap all 3.74 [32.8 kB] Get:671 http://deb.debian.org/debian trixie/main amd64 manpages-dev all 6.9.1-1 [2122 kB] Get:672 http://deb.debian.org/debian trixie/main amd64 maq amd64 0.7.1-10 [302 kB] Get:673 http://deb.debian.org/debian trixie/main amd64 med-config all 3.8.1 [11.1 kB] Get:674 http://deb.debian.org/debian trixie/main amd64 mesa-vulkan-drivers amd64 24.2.8-1 [13.5 MB] Get:675 http://deb.debian.org/debian trixie/main amd64 muscle amd64 1:5.1.0-1 [297 kB] Get:676 http://deb.debian.org/debian trixie/main amd64 mustang amd64 3.2.4-1 [105 kB] Get:677 http://deb.debian.org/debian trixie/main amd64 ncbi-data all 6.1.20170106+dfsg2-5 [3537 kB] Get:678 http://deb.debian.org/debian trixie/main amd64 ncbi-blast+ amd64 2.16.0+ds-6+b1 [15.2 MB] Get:679 http://deb.debian.org/debian trixie/main amd64 ncbi-blast+-legacy all 2.16.0+ds-6 [10.4 kB] Get:680 http://deb.debian.org/debian trixie/main amd64 ncoils amd64 2002-9 [22.2 kB] Get:681 http://deb.debian.org/debian trixie/main amd64 pal2nal all 14.1-3 [17.8 kB] Get:682 http://deb.debian.org/debian trixie/main amd64 paml amd64 4.9j+dfsg-5 [714 kB] Get:683 http://deb.debian.org/debian trixie/main amd64 perl-doc all 5.40.0-8 [8263 kB] Get:684 http://deb.debian.org/debian trixie/main amd64 perl-tk amd64 1:804.036+dfsg1-3+b1 [1987 kB] Get:685 http://deb.debian.org/debian trixie/main amd64 phylip amd64 1:3.697+dfsg-4 [957 kB] Get:686 http://deb.debian.org/debian trixie/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get:687 http://deb.debian.org/debian trixie/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get:688 http://deb.debian.org/debian trixie/main amd64 poa amd64 2.0+20060928-9 [53.3 kB] Get:689 http://deb.debian.org/debian trixie/main amd64 prank amd64 0.0.170427+dfsg-3 [395 kB] Get:690 http://deb.debian.org/debian trixie/main amd64 primer3 amd64 2.6.1-5 [204 kB] Get:691 http://deb.debian.org/debian trixie/main amd64 probalign amd64 1.4-10 [70.6 kB] Get:692 http://deb.debian.org/debian trixie/main amd64 probcons amd64 1.12-14 [119 kB] Get:693 http://deb.debian.org/debian trixie/main amd64 proda amd64 1.0-14 [65.4 kB] Get:694 http://deb.debian.org/debian trixie/main amd64 proj-bin amd64 9.5.1-1 [223 kB] Get:695 http://deb.debian.org/debian trixie/main amd64 psmisc amd64 23.7-1 [266 kB] Get:696 http://deb.debian.org/debian trixie/main amd64 publicsuffix all 20241025.1547-0.1 [287 kB] Get:697 http://deb.debian.org/debian trixie/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get:698 http://deb.debian.org/debian trixie/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get:699 http://deb.debian.org/debian trixie/main amd64 python3-attr all 23.2.0-2 [65.5 kB] Get:700 http://deb.debian.org/debian trixie/main amd64 python3-brotli amd64 1.1.0-2+b6 [321 kB] Get:701 http://deb.debian.org/debian trixie/main amd64 python3-soupsieve all 2.6-1 [38.3 kB] Get:702 http://deb.debian.org/debian trixie/main amd64 python3-bs4 all 4.12.3-3 [133 kB] Get:703 http://deb.debian.org/debian trixie/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get:704 http://deb.debian.org/debian trixie/main amd64 python3-contourpy amd64 1.3.1-1 [264 kB] Get:705 http://deb.debian.org/debian trixie/main amd64 python3-cssselect all 1.2.0-4 [21.7 kB] Get:706 http://deb.debian.org/debian trixie/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get:707 http://deb.debian.org/debian trixie/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get:708 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get:709 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get:710 http://deb.debian.org/debian trixie/main amd64 python3-fs all 2.4.16-5 [95.1 kB] Get:711 http://deb.debian.org/debian trixie/main amd64 python3-lxml amd64 5.3.0-1+b1 [1676 kB] Get:712 http://deb.debian.org/debian trixie/main amd64 python3-lz4 amd64 4.4.0+dfsg-1 [25.5 kB] Get:713 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.13.1-6 [20.2 MB] Get:714 http://deb.debian.org/debian trixie/main amd64 python3-ufolib2 all 0.17.0+dfsg1-1 [33.0 kB] Get:715 http://deb.debian.org/debian trixie/main amd64 python3-unicodedata2 amd64 15.1.0+ds-1+b3 [299 kB] Get:716 http://deb.debian.org/debian trixie/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get:717 http://deb.debian.org/debian trixie/main amd64 python3-fonttools amd64 4.55.0-3 [1634 kB] Get:718 http://deb.debian.org/debian trixie/main amd64 python3-gdal amd64 3.9.3+dfsg-1+b1 [1217 kB] Get:719 http://deb.debian.org/debian trixie/main amd64 python3-webencodings all 0.5.1-5 [11.1 kB] Get:720 http://deb.debian.org/debian trixie/main amd64 python3-html5lib all 1.2-1 [92.2 kB] Get:721 http://deb.debian.org/debian trixie/main amd64 python3-kiwisolver amd64 1.4.7-2+b1 [77.0 kB] Get:722 http://deb.debian.org/debian trixie/main amd64 python3-pil amd64 10.4.0-1+b1 [522 kB] Get:723 http://deb.debian.org/debian trixie/main amd64 python3.12-tk amd64 3.12.8-1 [113 kB] Get:724 http://deb.debian.org/debian trixie/main amd64 python3.13-tk amd64 3.13.1-1 [103 kB] Get:725 http://deb.debian.org/debian trixie/main amd64 python3-tk amd64 3.12.7-1 [9444 B] Get:726 http://deb.debian.org/debian trixie/main amd64 python3-pil.imagetk amd64 10.4.0-1+b1 [79.8 kB] Get:727 http://deb.debian.org/debian trixie/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get:728 http://deb.debian.org/debian trixie/main amd64 python3-matplotlib amd64 3.8.3-3+b1 [5654 kB] Get:729 http://deb.debian.org/debian trixie/main amd64 python3-olefile all 0.47-1 [39.3 kB] Get:730 http://deb.debian.org/debian trixie/main amd64 python3-pydot all 2.0.0-3 [32.6 kB] Get:731 http://deb.debian.org/debian trixie/main amd64 python3-pygraphviz amd64 1.14-1+b1 [78.0 kB] Get:732 http://deb.debian.org/debian trixie/main amd64 python3-yaml amd64 6.0.2-1+b1 [178 kB] Get:733 http://deb.debian.org/debian trixie/main amd64 zip amd64 3.0-14 [233 kB] Get:734 http://deb.debian.org/debian trixie/main amd64 unzip amd64 6.0-28 [166 kB] Get:735 http://deb.debian.org/debian trixie/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] Get:736 http://deb.debian.org/debian trixie/main amd64 r-base-core amd64 4.4.2-1 [28.3 MB] Get:737 http://deb.debian.org/debian trixie/main amd64 xauth amd64 1:1.1.2-1 [36.0 kB] Get:738 http://deb.debian.org/debian trixie/main amd64 r-base-dev all 4.4.2-1 [4516 B] Get:739 http://deb.debian.org/debian trixie/main amd64 r-cran-boot all 1.3-31-1 [639 kB] Get:740 http://deb.debian.org/debian trixie/main amd64 r-cran-mass amd64 7.3-61-1 [1112 kB] Get:741 http://deb.debian.org/debian trixie/main amd64 r-cran-class amd64 7.3-22-2 [87.3 kB] Get:742 http://deb.debian.org/debian trixie/main amd64 r-cran-cluster amd64 2.1.6-1 [568 kB] Get:743 http://deb.debian.org/debian trixie/main amd64 r-cran-codetools all 0.2-20-1 [91.1 kB] Get:744 http://deb.debian.org/debian trixie/main amd64 r-cran-foreign amd64 0.8.87-1 [253 kB] Get:745 http://deb.debian.org/debian trixie/main amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.7 kB] Get:746 http://deb.debian.org/debian trixie/main amd64 r-cran-lattice amd64 0.22-6-1 [1392 kB] Get:747 http://deb.debian.org/debian trixie/main amd64 r-cran-matrix amd64 1.7-1-1 [4138 kB] Get:748 http://deb.debian.org/debian trixie/main amd64 r-cran-nlme amd64 3.1.166-1 [2330 kB] Get:749 http://deb.debian.org/debian trixie/main amd64 r-cran-mgcv amd64 1.9-1-1 [3233 kB] Get:750 http://deb.debian.org/debian trixie/main amd64 r-cran-nnet amd64 7.3-19-2 [111 kB] Get:751 http://deb.debian.org/debian trixie/main amd64 r-cran-survival amd64 3.7-0-1 [6305 kB] Get:752 http://deb.debian.org/debian trixie/main amd64 r-cran-rpart amd64 4.1.23-1 [685 kB] Get:753 http://deb.debian.org/debian trixie/main amd64 r-cran-spatial amd64 7.3-17-1 [128 kB] Get:754 http://deb.debian.org/debian trixie/main amd64 r-doc-html all 4.4.2-1 [582 kB] Get:755 http://deb.debian.org/debian trixie/main amd64 r-recommended all 4.4.2-1 [2572 B] Get:756 http://deb.debian.org/debian trixie/main amd64 raxml amd64 8.2.13+dfsg-1+b1 [1499 kB] Get:757 http://deb.debian.org/debian trixie/main amd64 sim4 amd64 0.0.20121010-8 [359 kB] Get:758 http://deb.debian.org/debian trixie/main amd64 systemd-cryptsetup amd64 257~rc3-1 [168 kB] Get:759 http://deb.debian.org/debian trixie/main amd64 t-coffee amd64 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 [1032 kB] Get:760 http://deb.debian.org/debian trixie/main amd64 tm-align amd64 20190822+dfsg-3 [867 kB] Get:761 http://deb.debian.org/debian trixie/main amd64 trimmomatic all 0.39+dfsg-2 [758 kB] Get:762 http://deb.debian.org/debian trixie/main amd64 wise-data all 2.4.1-25 [76.1 kB] Get:763 http://deb.debian.org/debian trixie/main amd64 wise amd64 2.4.1-25 [1037 kB] Get:764 http://deb.debian.org/debian trixie/main amd64 x11-xserver-utils amd64 7.7+10+b1 [163 kB] Get:765 http://deb.debian.org/debian trixie/main amd64 xdg-user-dirs amd64 0.18-1 [54.4 kB] Get:766 http://deb.debian.org/debian trixie/main amd64 libegl1 amd64 1.7.0-1+b2 [34.6 kB] Get:767 http://deb.debian.org/debian trixie/main amd64 zutty amd64 0.16.2.20241020+dfsg1-1 [182 kB] Get:768 http://deb.debian.org/debian trixie/main amd64 gnupg-utils amd64 2.2.45-2 [506 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 650 MB in 5s (124 MB/s) Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b3_amd64.deb ... Unpacking libapparmor1:amd64 (3.1.7-1+b3) ... Selecting previously unselected package libsystemd-shared:amd64. Preparing to unpack .../libsystemd-shared_257~rc3-1_amd64.deb ... Unpacking libsystemd-shared:amd64 (257~rc3-1) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_257~rc3-1_amd64.deb ... Unpacking systemd (257~rc3-1) ... Setting up libapparmor1:amd64 (3.1.7-1+b3) ... Setting up libsystemd-shared:amd64 (257~rc3-1) ... Setting up systemd (257~rc3-1) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' → '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' → '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' → '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. [ESC][0;1;39m/usr/lib/tmpfiles.d/legacy.conf:14: Duplicate line for path "/run/lock", ignoring.[ESC][0m [ESC][0;1;31m"/home" already exists and is not a directory.[ESC][0m Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6097 files and directories currently installed.) Preparing to unpack .../0-systemd-sysv_257~rc3-1_amd64.deb ... Unpacking systemd-sysv (257~rc3-1) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../1-libdbus-1-3_1.14.10-6_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.14.10-6) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../2-dbus-bin_1.14.10-6_amd64.deb ... Unpacking dbus-bin (1.14.10-6) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../3-dbus-session-bus-common_1.14.10-6_all.deb ... Unpacking dbus-session-bus-common (1.14.10-6) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../4-libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../5-dbus-daemon_1.14.10-6_amd64.deb ... Unpacking dbus-daemon (1.14.10-6) ... Selecting previously unselected package adduser. Preparing to unpack .../6-adduser_3.137_all.deb ... Unpacking adduser (3.137) ... Setting up adduser (3.137) ... Selecting previously unselected package dbus-system-bus-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6240 files and directories currently installed.) Preparing to unpack .../0-dbus-system-bus-common_1.14.10-6_all.deb ... Unpacking dbus-system-bus-common (1.14.10-6) ... Selecting previously unselected package dbus. Preparing to unpack .../1-dbus_1.14.10-6_amd64.deb ... Unpacking dbus (1.14.10-6) ... Selecting previously unselected package fonts-lato. Preparing to unpack .../2-fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libmpfr6:amd64. Preparing to unpack .../3-libmpfr6_4.2.1-1+b2_amd64.deb ... Unpacking libmpfr6:amd64 (4.2.1-1+b2) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../5-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../6-libsigsegv2_2.14-1+b2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.14-1+b2) ... Setting up libmpfr6:amd64 (4.2.1-1+b2) ... Setting up readline-common (8.2-5) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up libsigsegv2:amd64 (2.14-1+b2) ... Selecting previously unselected package gawk. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6351 files and directories currently installed.) Preparing to unpack .../gawk_1%3a5.2.1-2+b1_amd64.deb ... Unpacking gawk (1:5.2.1-2+b1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../liblocale-gettext-perl_1.07-7+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package poppler-data. Preparing to unpack .../poppler-data_0.4.12-1_all.deb ... Unpacking poppler-data (0.4.12-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../libpython3.12-minimal_3.12.8-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.8-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.8-1_amd64.deb ... Unpacking python3.12-minimal (3.12.8-1) ... Setting up libpython3.12-minimal:amd64 (3.12.8-1) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7398 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_amd64.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../03-libncursesw6_6.5-2+b1_amd64.deb ... Unpacking libncursesw6:amd64 (6.5-2+b1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../05-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../06-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../07-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../08-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../09-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../10-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../11-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../12-libsqlite3-0_3.46.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.1-1) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../13-libpython3.12-stdlib_3.12.8-1_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.8-1) ... Selecting previously unselected package python3.12. Preparing to unpack .../14-python3.12_3.12.8-1_amd64.deb ... Unpacking python3.12 (3.12.8-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../15-libpython3-stdlib_3.12.6-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 7925 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.6-1_amd64.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../001-libproc2-0_2%3a4.0.4-6_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../002-procps_2%3a4.0.4-6_amd64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package bzip2. Preparing to unpack .../004-bzip2_1.0.8-6_amd64.deb ... Unpacking bzip2 (1.0.8-6) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../007-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../008-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. 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Adding 'diversion of /usr/bin/luit to /usr/bin/luit.x11-utils by luit' Adding 'diversion of /usr/share/man/man1/luit.1.gz to /usr/share/man/man1/luit.x11-utils.1.gz by luit' Unpacking luit (2.0.20240910-1) ... Selecting previously unselected package lynx-common. Preparing to unpack .../628-lynx-common_2.9.2-1_all.deb ... Unpacking lynx-common (2.9.2-1) ... Selecting previously unselected package lynx. Preparing to unpack .../629-lynx_2.9.2-1_amd64.deb ... Unpacking lynx (2.9.2-1) ... Selecting previously unselected package mafft. Preparing to unpack .../630-mafft_7.505-1_amd64.deb ... Unpacking mafft (7.505-1) ... Selecting previously unselected package mailcap. Preparing to unpack .../631-mailcap_3.74_all.deb ... Unpacking mailcap (3.74) ... Selecting previously unselected package manpages-dev. Preparing to unpack .../632-manpages-dev_6.9.1-1_all.deb ... Unpacking manpages-dev (6.9.1-1) ... Selecting previously unselected package maq. 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Creating group 'systemd-timesync' with GID 997. Creating user 'systemd-timesync' (systemd Time Synchronization) with UID 997 and GID 997. Created symlink '/etc/systemd/system/dbus-org.freedesktop.timesync1.service' → '/usr/lib/systemd/system/systemd-timesyncd.service'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-timesyncd.service' → '/usr/lib/systemd/system/systemd-timesyncd.service'. Setting up libatomic1:amd64 (14.2.0-8) ... Setting up libidn12:amd64 (1.42-2+b1) ... Setting up patch (2.7.6-7) ... Setting up libtcl8.6:amd64 (8.6.15+dfsg-2) ... Setting up icu-devtools (72.1-5+b1) ... Setting up libmariadb3:amd64 (1:11.4.3-1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up unixodbc-common (2.3.12-1) ... Setting up libjbzip2-java (0.9.1-8) ... Setting up libpcsclite1:amd64 (2.3.0-3) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up libsensors5:amd64 (1:3.6.0-10+b1) ... Setting up libncursesw6:amd64 (6.5-2+b1) ... Setting up wise-data (2.4.1-25) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up lynx-common (2.9.2-1) ... Setting up amap-align (2.2+git20080214.600fc29+dfsg-2) ... Setting up libltdl7:amd64 (2.4.7-8) ... Setting up libglapi-mesa:amd64 (24.2.8-1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:amd64 (14.2.0-8) ... Setting up libvulkan1:amd64 (1.3.296.0-1) ... Setting up libnghttp3-9:amd64 (1.6.0-2) ... Setting up libwebp7:amd64 (1.4.0-0.1+b1) ... Setting up ruby-webrick (1.8.1-1) ... Setting up liblzma-dev:amd64 (5.6.3-1+b1) ... Setting up libubsan1:amd64 (14.2.0-8) ... Setting up libxcb-dri2-0:amd64 (1.17.0-2+b1) ... Setting up libgif7:amd64 (5.2.2-1+b1) ... Setting up libodbc2:amd64 (2.3.12-1+b3) ... Setting up liburiparser1:amd64 (0.9.8+dfsg-2) ... Setting up fonts-dejavu-extra (2.37-8) ... Setting up libnuma1:amd64 (2.0.18-1+b1) ... Setting up libpcre2-posix3:amd64 (10.44-4) ... Setting up libfyba0t64:amd64 (4.1.1-11+b1) ... Setting up alsa-topology-conf (1.2.5.1-3) ... Setting up libdav1d7:amd64 (1.5.0-1+b1) ... Setting up perl-modules-5.40 (5.40.0-8) ... Setting up sensible-utils (0.0.24) ... Setting up libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libxshmfence1:amd64 (1.3-1+b2) ... Setting up libhwasan0:amd64 (14.2.0-8) ... Setting up paml (4.9j+dfsg-5) ... Setting up at-spi2-common (2.54.0-1) ... Setting up libcrypt-dev:amd64 (1:4.4.36-5) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up dialign-tx (1.0.2-15) ... Setting up libxcb-randr0:amd64 (1.17.0-2+b1) ... Setting up dbus-session-bus-common (1.14.10-6) ... Setting up librav1e0.7:amd64 (0.7.1-7+b2) ... Setting up libasan8:amd64 (14.2.0-8) ... Setting up pal2nal (14.1-3) ... Setting up libassuan9:amd64 (3.0.1-2) ... Setting up procps (2:4.0.4-6) ... Setting up libapr1t64:amd64 (1.7.5-1) ... Setting up libblosc1:amd64 (1.21.5+ds-1+b2) ... Setting up fonts-liberation (1:2.1.5-3) ... Setting up gpgconf (2.2.45-2) ... Setting up clustalw (2.1+lgpl-7) ... Setting up liblua5.4-0:amd64 (5.4.7-1+b1) ... Setting up libopenjp2-7:amd64 (2.5.0-2+b4) ... Setting up libx11-6:amd64 (2:1.8.10-2) ... Setting up libthai-data (0.1.29-2) ... Setting up netbase (6.4) ... Setting up libabsl20230802:amd64 (20230802.1-4) ... Setting up libngtcp2-16:amd64 (1.9.1-1) ... Setting up libcdt5:amd64 (2.42.4-2+b1) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libcgraph6:amd64 (2.42.4-2+b1) ... Setting up fonts-droid-fallback (1:8.1.0r7-1~1.gbp36536b) ... Setting up libwayland-egl1:amd64 (1.23.0-1+b1) ... Setting up libmbedcrypto16:amd64 (3.6.2-3) ... Setting up libxkbfile1:amd64 (1:1.1.0-1+b2) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up lynx (2.9.2-1) ... update-alternatives: using /usr/bin/lynx to provide /usr/bin/www-browser (www-browser) in auto mode Setting up libtsan2:amd64 (14.2.0-8) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up fonts-liberation-sans-narrow (1:1.07.6-4) ... Setting up libbinutils:amd64 (2.43.50.20241204-2) ... Setting up dbus-system-bus-common (1.14.10-6) ... Setting up menu (2.1.50) ... Setting up libisl23:amd64 (0.27-1) ... Setting up libde265-0:amd64 (1.0.15-1+b2) ... Setting up libc-dev-bin (2.40-4) ... Setting up libkmlbase1t64:amd64 (1.3.0-12+b1) ... Setting up python-matplotlib-data (3.8.3-3) ... Setting up openssl (3.3.2-2) ... Setting up libwebpmux3:amd64 (1.4.0-0.1+b1) ... Setting up libdeflate-dev:amd64 (1.22-1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libyuv0:amd64 (0.0.1898.20241125-1) ... Setting up kmc (3.2.4+dfsg-1+b1) ... Setting up libxcomposite1:amd64 (1:0.4.6-1) ... Setting up libjson-c5:amd64 (0.18+ds-1) ... Setting up ruby-xmlrpc (0.3.3-2) ... Setting up publicsuffix (20241025.1547-0.1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up xdg-utils (1.2.1-2) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libcc1-0:amd64 (14.2.0-8) ... Setting up libxmuu1:amd64 (2:1.1.3-3+b3) ... Setting up dbus-bin (1.14.10-6) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up gpg (2.2.45-2) ... Setting up liblsan0:amd64 (14.2.0-8) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.9.1-1) ... Setting up libblas-dev:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up libsz2:amd64 (1.1.3-1+b1) ... Setting up libitm1:amd64 (14.2.0-8) ... Setting up libkmod2:amd64 (33+20240816-2) ... Setting up prank (0.0.170427+dfsg-3) ... Setting up libargtable2-0 (13-3) ... Setting up maq (0.7.1-10) ... Setting up gnupg-utils (2.2.45-2) ... Setting up raxml (8.2.13+dfsg-1+b1) ... Setting up gdal-plugins:amd64 (3.9.3+dfsg-1+b1) ... Setting up libxkbcommon0:amd64 (1.6.0-1+b2) ... Setting up libwayland-client0:amd64 (1.23.0-1+b1) ... Setting up libctf0:amd64 (2.43.50.20241204-2) ... Setting up pinentry-curses (1.2.1-4+b1) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2+b1) ... Setting up libllvm19:amd64 (1:19.1.4-1) ... Setting up smalt (0.7.6-13) ... Setting up libaprutil1t64:amd64 (1.6.3-3) ... Setting up manpages-dev (6.9.1-1) ... Setting up libx11-xcb1:amd64 (2:1.8.10-2) ... Setting up libice6:amd64 (2:1.1.1-1) ... Setting up libodbcinst2:amd64 (2.3.12-1+b3) ... Setting up liblapack3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libarpack2t64:amd64 (3.9.1-1.2+b1) ... Setting up libxdamage1:amd64 (1:1.1.6-1+b2) ... Setting up gpg-agent (2.2.45-2) ... Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket' → '/usr/lib/systemd/user/gpg-agent-browser.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket' → '/usr/lib/systemd/user/gpg-agent-extra.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket' → '/usr/lib/systemd/user/gpg-agent-ssh.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent.socket' → '/usr/lib/systemd/user/gpg-agent.socket'. Setting up libxpm4:amd64 (1:3.5.17-1+b2) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b2) ... Setting up libpng-tools (1.6.44-2) ... Setting up alsa-ucm-conf (1.2.12-1) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libgeos-c1t64:amd64 (3.13.0-1) ... Setting up libwebpdemux2:amd64 (1.4.0-0.1+b1) ... Setting up gpgsm (2.2.45-2) ... Setting up libavahi-common3:amd64 (0.8-15) ... Setting up libxext6:amd64 (2:1.3.4-1+b2) ... Setting up libnss3:amd64 (2:3.106-1) ... Setting up dbus-daemon (1.14.10-6) ... Setting up clustalo (1.2.4-8) ... Setting up tm-align (20190822+dfsg-3) ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b3) ... Setting up libkmldom1t64:amd64 (1.3.0-12+b1) ... Setting up libperl5.40:amd64 (5.40.0-8) ... Setting up dirmngr (2.2.45-2) ... Created symlink '/etc/systemd/user/sockets.target.wants/dirmngr.socket' → '/usr/lib/systemd/user/dirmngr.socket'. Setting up libthai0:amd64 (0.1.29-2+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up perl (5.40.0-8) ... Setting up libpackage-stash-xs-perl:amd64 (0.30-1+b4) ... Setting up libglib2.0-0t64:amd64 (2.82.2-3) ... Setting up libgprofng0:amd64 (2.43.50.20241204-2) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up libmbedx509-7:amd64 (3.6.2-3) ... Setting up libset-object-perl (1.42-1+b5) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libdata-dump-perl (1.25-1) ... Setting up libref-util-perl (0.204-2) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b2) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libxml-xpathengine-perl (0.14-2) ... Setting up libxml-writer-perl (0.900-2) ... Setting up dbus (1.14.10-6) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libio-compress-brotli-perl (0.004001-2+b3) ... Setting up shared-mime-info (2.4-5+b1) ... Setting up libxinerama1:amd64 (2:1.1.4-3+b2) ... Setting up libx265-209:amd64 (3.6-3+b1) ... Setting up libcrypt-rc4-perl (2.02-5) ... Setting up libxv1:amd64 (2:1.0.11-1.1+b2) ... Setting up liblapack-dev:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libvariable-magic-perl (0.64-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up libxrandr2:amd64 (2:1.5.4-1+b1) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-3+b2) ... Setting up cpp-14-x86-64-linux-gnu (14.2.0-8) ... Setting up libgav1-1:amd64 (0.19.0-2+b2) ... Setting up liblist-moreutils-xs-perl (0.430-4+b2) ... Setting up ucf (3.0045) ... Setting up libmath-derivative-perl (1.01-3) ... Setting up libdpkg-perl (1.22.11) ... Setting up cpp-14 (14.2.0-8) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libhdf4-0-alt:amd64 (4.3.0-1+b1) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libmbedtls21:amd64 (3.6.2-3) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libset-scalar-perl (1.29-3) ... Setting up libsub-name-perl:amd64 (0.27-1+b3) ... Setting up libtype-tiny-xs-perl:amd64 (0.025-2+b1) ... Setting up libgvpr2:amd64 (2.42.4-2+b1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up librttopo1:amd64 (1.1.0-3+b2) ... Setting up libparse-recdescent-perl (1.967015+dfsg-4) ... Setting up libfreexl1:amd64 (2.0.0-1+b3) ... Setting up xauth (1:1.1.2-1) ... Setting up libwayland-cursor0:amd64 (1.23.0-1+b1) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up mummer (3.23+dfsg-8) ... Setting up gnupg (2.2.45-2) ... Setting up libpam-systemd:amd64 (257~rc3-1) ... Setting up libfcgi-perl (0.82+ds-3+b2) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up libc6-dev:amd64 (2.40-4) ... Setting up libharfbuzz0b:amd64 (10.0.1-1) ... Setting up libcarp-clan-perl (6.08-2) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1+b1) ... Setting up libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2+b1) ... Setting up libarmadillo14 (1:14.2.1+dfsg-1+b1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b4) ... Setting up libgpgme11t64:amd64 (1.24.0-2) ... Setting up libdevel-symdump-perl (2.18-5) ... Setting up libxss1:amd64 (1:1.2.3-1+b2) ... Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libexporter-tiny-perl (1.006002-1) ... Setting up libgcc-14-dev:amd64 (14.2.0-8) ... Setting up libstdc++-14-dev:amd64 (14.2.0-8) ... Setting up mailcap (3.74) ... Setting up libpostscript-perl (0.06-3.1) ... Setting up libsm6:amd64 (2:1.2.4-1) ... Setting up libicu-dev:amd64 (72.1-5+b1) ... Setting up libsort-naturally-perl (1.03-4) ... Setting up exonerate (2.4.0-5+b1) ... Setting up libavahi-client3:amd64 (0.8-15) ... Setting up liburi-perl (5.30-1) ... Setting up libx11-protocol-perl (0.56-9) ... Setting up libdbi-perl:amd64 (1.645-1+b1) ... Setting up libdate-manip-perl (6.96-1) ... Setting up libfile-sort-perl (1.01-3) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up binutils-x86-64-linux-gnu (2.43.50.20241204-2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libtext-csv-perl (2.04-1) ... Setting up libbz2-dev:amd64 (1.0.8-6) ... Setting up libnet-ssleay-perl:amd64 (1.94-2) ... Setting up cpp-x86-64-linux-gnu (4:14.2.0-1) ... Setting up libmath-spline-perl (0.02-4) ... Setting up libgfortran-14-dev:amd64 (14.2.0-8) ... Setting up libjcode-pm-perl (2.06-1.1) ... Setting up libio-sessiondata-perl (1.03-3) ... Setting up libgpgmepp6t64:amd64 (1.24.0-2) ... Setting up libpaper1:amd64 (1.1.29+b2) ... Creating config file /etc/papersize with new version Setting up gtk-update-icon-cache (4.16.7+ds-1) ... Setting up libgts-bin (0.7.6+darcs121130-5.2+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libavif16:amd64 (1.1.1-1) ... Setting up libxft2:amd64 (2.3.6-1+b2) ... Setting up libncurses-dev:amd64 (6.5-2+b1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libtie-ixhash-perl (1.23-4) ... Setting up libtask-weaken-perl (1.06-2) ... Setting up libatk1.0-0t64:amd64 (2.54.0-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up openjdk-21-jre-headless:amd64 (21.0.5+11-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libconvert-binary-c-perl (0.85-1+b1) ... Setting up libpcre2-dev:amd64 (10.44-4) ... Setting up libxi6:amd64 (2:1.8.2-1) ... Setting up gpg-wks-client (2.2.45-2) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libfont-afm-perl (1.20-4) ... Setting up libdynaloader-functions-perl (0.004-1) ... Setting up libtest-deep-perl (1.204-1) ... Setting up libcurl4t64:amd64 (8.11.0-1) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up libxml-regexp-perl (0.04-1.1) ... Setting up libref-util-xs-perl (0.117-2+b4) ... Setting up libalgorithm-munkres-perl (0.08-5) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up perl-tk (1:804.036+dfsg1-3+b1) ... Setting up libio-pty-perl (1:1.20-1+b2) ... Setting up libogdi4.1:amd64 (4.1.1+ds-5) ... Setting up libfile-fcntllock-perl (0.22-4+b4) ... Setting up mafft (7.505-1) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libsub-identify-perl (0.14-3+b3) ... Setting up libdrm-radeon1:amd64 (2.4.123-1) ... Setting up wise (2.4.1-25) ... Setting up libio-stringy-perl (2.113-2) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libxtst6:amd64 (2:1.2.3-1.1+b2) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libauthen-sasl-perl (2.1700-1) ... Setting up libtk8.6:amd64 (8.6.15-1) ... Setting up libxcursor1:amd64 (1:1.2.2-1+b1) ... Setting up libfile-slurp-tiny-perl (0.004-2) ... Setting up libipc-sharelite-perl (0.17-5+b3) ... Setting up libconvert-binhex-perl (1.125-3) ... Setting up libheap-perl (0.80-5) ... Setting up libpango-1.0-0:amd64 (1.55.0+ds-3) ... Setting up libdrm-intel1:amd64 (2.4.123-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.902.0+ds-2+b1) ... Setting up python3.12-tk (3.12.8-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libtype-tiny-perl (2.004000-1) ... Setting up libpq5:amd64 (17.2-1) ... Setting up libxxf86dga1:amd64 (2:1.1.5-1+b2) ... Setting up libcurl3t64-gnutls:amd64 (8.11.0-1) ... Setting up libcloudproviders0:amd64 (0.3.6-1+b1) ... Setting up perl-doc (5.40.0-8) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libsvg-perl (2.87-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libbsd-resource-perl (1.2911-2+b4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libdbd-pg-perl (3.18.0-1+b3) ... Setting up libtext-csv-xs-perl:amd64 (1.57-1) ... Setting up rubygems-integration (1.18) ... Setting up fsa (1.15.9+dfsg-6) ... Setting up libexception-class-perl (1.45-1) ... Setting up binutils (2.43.50.20241204-2) ... Setting up libkmlengine1t64:amd64 (1.3.0-12+b1) ... Setting up libpaper-utils (1.1.29+b2) ... Setting up libaprutil1-ldap:amd64 (1.6.3-3) ... Setting up libreadline-dev:amd64 (8.2-5) ... Setting up libxstring-perl:amd64 (0.005-2+b4) ... Setting up libgraph-perl (1:0.9729-1) ... Setting up libxerces-c3.2t64:amd64 (3.2.4+debian-1.3+b1) ... Setting up xfonts-utils (1:7.7+7) ... Setting up apache2-bin (2.4.62-3) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Setting up libyaml-perl (1.31-1) ... Setting up libcairo2:amd64 (1.18.2-2) ... Setting up python3.13-tk (3.13.1-1) ... Setting up libspreadsheet-writeexcel-perl (2.40-4) ... Setting up libcolord2:amd64 (1.4.7-1+b2) ... Setting up dpkg-dev (1.22.11) ... Setting up libbit-vector-perl:amd64 (7.4-3+b2) ... Setting up libfreezethaw-perl (0.5001-3) ... Setting up liberror-perl (0.17029-2) ... Setting up libdconf1:amd64 (0.40.0-4+b3) ... Setting up libdigest-perl-md5-perl (1.9-5) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libreadonly-perl (2.050-3) ... Setting up dbus-user-session (1.14.10-6) ... Setting up libunicode-map-perl (0.112-13+b4) ... Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) ... Setting up libcfitsio10t64:amd64 (4.5.0-5) ... Setting up libtest-exception-perl (0.43-3) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-3+b1) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libatspi2.0-0t64:amd64 (2.54.0-1) ... Setting up libraqm0:amd64 (0.10.1-1+b2) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2+b1) ... Setting up libdbd-mysql-perl:amd64 (4.052-1+b3) ... Setting up libipc-run-perl (20231003.0-2) ... Setting up libfile-desktopentry-perl (0.22-3) ... Setting up libole-storage-lite-perl (0.22-1) ... Setting up libspreadsheet-parseexcel-perl (0.6600-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libtree-dagnode-perl (1.32-1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up libgdk-pixbuf2.0-bin (2.42.12+dfsg-1+b1) ... Setting up cpp (4:14.2.0-1) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libpoppler140:amd64 (24.08.0-3) ... Setting up libhts3t64:amd64 (1.20+ds-2) ... Setting up libdbd-sqlite3-perl:amd64 (1.76-1) ... Setting up libcairo-gobject2:amd64 (1.18.2-2) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-8) ... Setting up libpangoft2-1.0-0:amd64 (1.55.0+ds-3) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-5+b1) ... Setting up libalgorithm-diff-xs-perl:amd64 (0.04-8+b4) ... Setting up libcups2t64:amd64 (2.4.10-2) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libpangocairo-1.0-0:amd64 (1.55.0+ds-3) ... Setting up libalgorithm-merge-perl (0.08-5) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhtml-form-perl (6.12-1) ... Setting up libbio-perl-run-perl (1.7.3-13) ... Setting up libatk-bridge2.0-0t64:amd64 (2.54.0-1) ... Setting up libfile-mimeinfo-perl (0.35-1) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-5+b1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up mesa-libgallium:amd64 (24.2.8-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libnetcdf19t64:amd64 (1:4.9.2-7) ... Setting up libxmu6:amd64 (2:1.1.3-3+b3) ... Setting up libstatistics-descriptive-perl (3.0801-1) ... Setting up libpython3.12-stdlib:amd64 (3.12.8-1) ... Setting up libdate-calc-perl (6.4-2) ... Setting up gcc-x86-64-linux-gnu (4:14.2.0-1) ... Setting up libcache-cache-perl (1.08-3) ... Setting up libproj25:amd64 (9.5.1-1) ... Setting up libgbm1:amd64 (24.2.8-1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libdate-calc-xs-perl:amd64 (6.4-2+b4) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.8-1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libcgi-pm-perl (4.66-1) ... Setting up libgl1-mesa-dri:amd64 (24.2.8-1) ... Setting up libpng-dev:amd64 (1.6.44-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3+b1) ... Setting up proj-bin (9.5.1-1) ... Setting up dconf-service (0.40.0-4+b3) ... Setting up libhtml-format-perl (2.16-2) ... Setting up libxaw7:amd64 (2:1.0.16-1) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up x11-xserver-utils (7.7+10+b1) ... Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-14 (14.2.0-8) ... Setting up libgeotiff5:amd64 (1.7.3-1+b1) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-8) ... Setting up samtools (1.20-3) ... Setting up librsvg2-2:amd64 (2.59.1+dfsg-1) ... Setting up libegl-mesa0:amd64 (24.2.8-1) ... Setting up libnet-smtp-ssl-perl (1.04-2) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libmailtools-perl (2.22-1) ... Setting up r-base-core (4.4.2-1) ... Creating config file /etc/R/Renviron with new version Setting up libxml-filter-buffertext-perl (1.01-7) ... Setting up libace-perl (1.92-12+b1) ... Setting up librsvg2-common:amd64 (2.59.1+dfsg-1) ... Setting up r-cran-lattice (0.22-6-1) ... Setting up r-cran-nlme (3.1.166-1) ... Setting up g++-14-x86-64-linux-gnu (14.2.0-8) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libhtml-tableextract-perl (2.15-2) ... Setting up libhttp-daemon-perl (6.16-1) ... Setting up r-cran-cluster (2.1.6-1) ... Setting up libegl1:amd64 (1.7.0-1+b2) ... Setting up g++-x86-64-linux-gnu (4:14.2.0-1) ... Setting up r-cran-nnet (7.3-19-2) ... Setting up g++-14 (14.2.0-8) ... Setting up gfortran-14 (14.2.0-8) ... Setting up libpython3-stdlib:amd64 (3.12.6-1) ... Setting up libspatialite8t64:amd64 (5.1.0-3+b2) ... Setting up libgs10-common (10.04.0~dfsg-2) ... Setting up libxml-sax-writer-perl (0.57-3) ... Setting up libsvg-graph-perl (0.02-4) ... Setting up r-cran-codetools (0.2-20-1) ... Setting up r-cran-boot (1.3-31-1) ... Setting up libglx-mesa0:amd64 (24.2.8-1) ... Setting up libglx0:amd64 (1.7.0-1+b2) ... Setting up dconf-gsettings-backend:amd64 (0.40.0-4+b3) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libtest-most-perl (0.38-1) ... Setting up libcgi-fast-perl (1:2.17-1) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up r-cran-spatial (7.3-17-1) ... Setting up libmoo-perl (2.005005-1) ... Setting up r-cran-mass (7.3-61-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up r-cran-foreign (0.8.87-1) ... Setting up libmime-tools-perl (5.515-1) ... Setting up gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Setting up python3-webencodings (0.5.1-5) ... Setting up python3-tz (2024.1-2) ... Setting up gcc (4:14.2.0-1) ... Setting up ncbi-blast+ (2.16.0+ds-6+b1) ... Setting up python3-pil:amd64 (10.4.0-1+b1) ... Setting up libarray-compare-perl (3.0.8-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.2-1) ... Setting up libgl1:amd64 (1.7.0-1+b2) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-brotli (1.1.0-2+b6) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.7-2+b1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up r-cran-matrix (1.7-1-1) ... Setting up python3-html5lib (1.2-1) ... Setting up libxml-libxslt-perl:amd64 (2.003000-2+b1) ... Setting up r-cran-kernsmooth (2.23-24-1) ... Setting up zutty (0.16.2.20241020+dfsg1-1) ... update-alternatives: using /usr/bin/zutty to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode Setting up r-cran-mgcv (1.9-1-1) ... Setting up g++ (4:14.2.0-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up python3-lxml:amd64 (5.3.0-1+b1) ... Setting up x11-utils (7.7+7) ... Setting up build-essential (12.12) ... Setting up python3-dateutil (2.9.0-3) ... Setting up libatk-wrapper-java (0.40.0-3) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-cssselect (1.2.0-4) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-soupsieve (2.6-1) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up libgs10:amd64 (10.04.0~dfsg-2) ... Setting up bioperl (1.7.8-1) ... Setting up ncbi-blast+-legacy (2.16.0+ds-6) ... Setting up gsettings-desktop-schemas (47.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-sympy (1.13.3-1) ... Setting up mesa-vulkan-drivers:amd64 (24.2.8-1) ... Setting up python3-attr (23.2.0-2) ... Setting up python3-pysam (0.22.1+ds-2+b2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up r-cran-class (7.3-22-2) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-lz4 (4.4.0+dfsg-1) ... Setting up python3-unicodedata2 (15.1.0+ds-1+b3) ... Setting up python3-olefile (0.47-1) ... Setting up fastaq (3.17.0-9) ... Setting up python3-typeguard (4.4.1-1) ... Setting up isympy-common (1.13.3-1) ... Setting up python3-yaml (6.0.2-1+b1) ... Setting up python3-tk:amd64 (3.12.7-1) ... Setting up r-cran-survival (3.7-0-1) ... Setting up ghostscript (10.04.0~dfsg-2) ... Setting up gfortran (4:14.2.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up python3-bs4 (4.12.3-3) ... Setting up libatk-wrapper-java-jni:amd64 (0.40.0-3+b3) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1+b1) ... Setting up isympy3 (1.13.3-1) ... Setting up libgtk-3-0t64:amd64 (3.24.43-4) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up at-spi2-core (2.54.0-1) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up r-base-dev (4.4.2-1) ... Setting up r-cran-rpart (4.1.23-1) ... Setting up libgtk-3-bin (3.24.43-4) ... Setting up python3-networkx (3.2.1-5) ... Setting up python3-fs (2.4.16-5) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-12) ... Setting up python3-contourpy (1.3.1-1) ... Setting up r-recommended (4.4.2-1) ... Setting up python3-scipy (1.13.1-6) ... Setting up python3-fonttools (4.55.0-3) ... Setting up rake (13.2.1-1) ... Setting up python3-ufolib2 (0.17.0+dfsg1-1) ... Setting up ruby3.1 (3.1.2-8.4) ... Setting up dmsetup (2:1.02.201-1) ... Setting up libheif-plugin-dav1d:amd64 (1.19.3-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libheif-plugin-libde265:amd64 (1.19.3-1) ... Setting up python3-matplotlib (3.8.3-3+b1) ... Setting up libruby:amd64 (1:3.1+nmu1) ... Setting up libwww-perl (6.77-1) ... Setting up libheif1:amd64 (1.19.3-1) ... Setting up ruby (1:3.1+nmu1) ... Setting up libapache2-mod-perl2 (2.0.13-2+b1) ... Setting up libgd3:amd64 (2.3.3-12+b1) ... Setting up libapache2-reload-perl (0.14-1) ... Setting up libgvc6 (2.42.4-2+b1) ... Setting up libbio-tools-run-remoteblast-perl (1.7.3-3) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.201-1) ... Setting up libgdal35:amd64 (3.9.3+dfsg-1+b1) ... Setting up libcryptsetup12:amd64 (2:2.7.5-1) ... Setting up python3-gdal (3.9.3+dfsg-1+b1) ... Setting up ruby-sdbm:amd64 (1.0.0-5+b5) ... Setting up graphviz (2.42.4-2+b1) ... Setting up libxml-parser-perl (2.47-1+b3) ... Setting up libheif-plugin-x265:amd64 (1.19.3-1) ... Setting up libheif-plugin-aomenc:amd64 (1.19.3-1) ... Setting up python3-pydot (2.0.0-3) ... Setting up libxml-twig-perl (1:3.52-3) ... Setting up libnet-dbus-perl (1.2.0-2+b3) ... Setting up ruby-rubygems (3.4.20-1) ... Setting up libxml-xpath-perl (1.48-1) ... Setting up libbio-variation-perl (1.7.5-3) ... Setting up libapache-dbi-perl (1.12-3) ... Setting up libgd-perl (2.78-1+b3) ... Setting up systemd-cryptsetup (257~rc3-1) ... Setting up libruby3.1t64:amd64 (3.1.2-8.4) ... Setting up libxml-sax-expat-perl (0.51-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::Expat with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up python3-pygraphviz (1.14-1+b1) ... Setting up libxml-perl (0.08-4) ... Setting up libsoap-lite-perl (1.27-3) ... Setting up libgraphviz-perl (2.24-1) ... Setting up libbio-cluster-perl (1.7.3-6) ... Setting up libxml-dom-perl (1.46-2) ... Setting up libbio-asn1-entrezgene-perl (1.730-3) ... Setting up libxml-dom-xpath-perl (0.14-4) ... Setting up libbio-eutilities-perl (1.77-2) ... Setting up libxmlrpc-lite-perl (0.717-5) ... Setting up libbio-featureio-perl (1.6.905-2) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for systemd (257~rc3-1) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up openjdk-21-jre:amd64 (21.0.5+11-1) ... Setting up openjdk-21-jdk-headless:amd64 (21.0.5+11-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up iva (1.0.11+ds-6) ... Setting up default-jre (2:1.21-76) ... Setting up default-jdk-headless (2:1.21-76) ... Setting up bioperl-run (1.7.3-13) ... Setting up trimmomatic (0.39+dfsg-2) ... Processing triggers for menu (2.1.50) ... Setting up blends-common (0.7.7) ... Setting up med-config (3.8.1) ... info: Selecting GID from range 100 to 999 ... info: Adding group `med' (GID 151) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1+b1) ... Processing triggers for ca-certificates-java (20240118) ... done. 2m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', '-y', 'install', 'iva=1.0.11+ds-6'] 2m6.2s INFO: Running scripts post_install 2m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_install_exceptions'] 2m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_install_exceptions'] 2m6.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 2m9.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 2m17.0s ERROR: WARN: Broken symlinks: /etc/vconsole.conf -> default/keyboard /etc/default/locale -> ../locale.conf /usr/lib/jvm/java-21-openjdk-amd64/lib/src.zip -> ../../openjdk-21/src.zip (openjdk-21-jdk-headless:amd64) /usr/share/doc/python3-networkx/html/_static/sphinx_highlight.js -> ../../../../javascript/sphinxdoc/1.0/sphinx_highlight.js (python3-networkx) /usr/share/doc/python3-networkx/html/_static/searchtools.js -> ../../../../javascript/sphinxdoc/1.0/searchtools.js (python3-networkx) /usr/share/doc/python3-networkx/html/_static/language_data.js -> ../../../../javascript/sphinxdoc/1.0/language_data.js (python3-networkx) /usr/share/doc/python3-networkx/html/_static/doctools.js -> ../../../../javascript/sphinxdoc/1.0/doctools.js (python3-networkx) 2m20.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', '-ac', '--ignore-obsolete'] 2m28.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', '-ac', '--ignore-obsolete'] 2m28.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 2m28.1s DUMP: 0.15.6 2m28.1s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 2m28.1s INFO: Running adequate version 0.15.6 now. 2m28.1s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'iva'] 2m28.3s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'iva'] 2m28.3s INFO: Running scripts pre_remove 2m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 2m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 2m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 2m28.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 2m28.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 2m59.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 2m59.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m60.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 2m60.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 3m0.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 3m0.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_exceptions'] 3m0.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/pre_remove_exceptions'] 3m0.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 3m0.2s DUMP: install ok installed adduser adduser 3.137 install ok installed adwaita-icon-theme adwaita-icon-theme 47.0-2 install ok installed alsa-topology-conf alsa-topology-conf 1.2.5.1-3 install ok installed alsa-ucm-conf alsa-ucm-conf 1.2.12-1 install ok installed amap-align amap-align 2.2+git20080214.600fc29+dfsg-2 install ok installed apache2-bin apache2-bin 2.4.62-3 install ok installed apt apt 2.9.16 install ok installed at-spi2-common at-spi2-common 2.54.0-1 install ok installed at-spi2-core at-spi2-core 2.54.0-1 install ok installed base-files base-files 13.6 install ok installed base-passwd base-passwd 3.6.5 install ok installed bash bash 5.2.37-1 install ok installed binutils binutils 2.43.50.20241204-2 install ok installed binutils-common:amd64 binutils-common 2.43.50.20241204-2 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.43.50.20241204-2 install ok installed bioperl bioperl 1.7.8-1 install ok installed bioperl-run bioperl-run 1.7.3-13 install ok installed blends-common blends-common 0.7.7 install ok installed blt blt 2.5.3+dfsg-7 install ok installed bsdutils bsdutils 1:2.40.2-12 install ok installed build-essential build-essential 12.12 install ok installed bwa bwa 0.7.18-1 install ok installed bzip2 bzip2 1.0.8-6 install ok installed bzip2-doc bzip2-doc 1.0.8-6 install ok installed ca-certificates ca-certificates 20240203 install ok installed ca-certificates-java ca-certificates-java 20240118 install ok installed clustalo clustalo 1.2.4-8 install ok installed clustalw clustalw 2.1+lgpl-7 install ok installed coreutils coreutils 9.5-1+b1 install ok installed cpp cpp 4:14.2.0-1 install ok installed cpp-14 cpp-14 14.2.0-8 install ok installed cpp-14-x86-64-linux-gnu cpp-14-x86-64-linux-gnu 14.2.0-8 install ok installed cpp-x86-64-linux-gnu cpp-x86-64-linux-gnu 4:14.2.0-1 install ok installed dash dash 0.5.12-9 install ok installed dbus dbus 1.14.10-6 install ok installed dbus-bin dbus-bin 1.14.10-6 install ok installed dbus-daemon dbus-daemon 1.14.10-6 install ok installed dbus-session-bus-common dbus-session-bus-common 1.14.10-6 install ok installed dbus-system-bus-common dbus-system-bus-common 1.14.10-6 install ok installed dbus-user-session dbus-user-session 1.14.10-6 install ok installed dconf-gsettings-backend:amd64 dconf-gsettings-backend 0.40.0-4+b3 install ok installed dconf-service dconf-service 0.40.0-4+b3 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.21 install ok installed default-jdk-headless default-jdk-headless 2:1.21-76 install ok installed default-jre default-jre 2:1.21-76 install ok installed default-jre-headless default-jre-headless 2:1.21-76 install ok installed dialign-tx dialign-tx 1.0.2-15 install ok installed dialign-tx-data dialign-tx-data 1.0.2-15 install ok installed diffutils diffutils 1:3.10-1 install ok installed dirmngr dirmngr 2.2.45-2 install ok installed dmsetup dmsetup 2:1.02.201-1 install ok installed dpkg dpkg 1.22.11 install ok installed dpkg-dev dpkg-dev 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.2~rc1-2 install ok installed exonerate exonerate 2.4.0-5+b1 install ok installed fakeroot fakeroot 1.36-1 install ok installed fastaq fastaq 3.17.0-9 install ok installed file file 1:5.45-3+b1 install ok installed findutils findutils 4.10.0-3 install ok installed fontconfig fontconfig 2.15.0-1.1+b1 install ok installed fontconfig-config fontconfig-config 2.15.0-1.1+b1 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-8 install ok installed fonts-dejavu-extra fonts-dejavu-extra 2.37-8 install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-8 install ok installed fonts-droid-fallback fonts-droid-fallback 1:8.1.0r7-1~1.gbp36536b install ok installed fonts-lato fonts-lato 2.015-1 install ok installed fonts-liberation fonts-liberation 1:2.1.5-3 install ok installed fonts-liberation-sans-narrow fonts-liberation-sans-narrow 1:1.07.6-4 install ok installed fonts-lyx fonts-lyx 2.4.2.1-1 install ok installed fonts-noto-mono fonts-noto-mono 20201225-2 install ok installed fonts-urw-base35 fonts-urw-base35 20200910-8 install ok installed fsa fsa 1.15.9+dfsg-6 install ok installed g++ g++ 4:14.2.0-1 install ok installed g++-14 g++-14 14.2.0-8 install ok installed g++-14-x86-64-linux-gnu g++-14-x86-64-linux-gnu 14.2.0-8 install ok installed g++-x86-64-linux-gnu g++-x86-64-linux-gnu 4:14.2.0-1 install ok installed gawk gawk 1:5.2.1-2+b1 install ok installed gcc gcc 4:14.2.0-1 install ok installed gcc-14 gcc-14 14.2.0-8 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-8 install ok installed gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu 14.2.0-8 install ok installed gcc-x86-64-linux-gnu gcc-x86-64-linux-gnu 4:14.2.0-1 install ok installed gdal-data gdal-data 3.9.3+dfsg-1 install ok installed gdal-plugins:amd64 gdal-plugins 3.9.3+dfsg-1+b1 install ok installed gfortran gfortran 4:14.2.0-1 install ok installed gfortran-14 gfortran-14 14.2.0-8 install ok installed gfortran-14-x86-64-linux-gnu gfortran-14-x86-64-linux-gnu 14.2.0-8 install ok installed gfortran-x86-64-linux-gnu gfortran-x86-64-linux-gnu 4:14.2.0-1 install ok installed ghostscript ghostscript 10.04.0~dfsg-2 install ok installed gnupg gnupg 2.2.45-2 install ok installed gnupg-l10n gnupg-l10n 2.2.45-2 install ok installed gnupg-utils gnupg-utils 2.2.45-2 install ok installed gpg gpg 2.2.45-2 install ok installed gpg-agent gpg-agent 2.2.45-2 install ok installed gpg-wks-client gpg-wks-client 2.2.45-2 install ok installed gpgconf gpgconf 2.2.45-2 install ok installed gpgsm gpgsm 2.2.45-2 install ok installed gpgv gpgv 2.2.45-2 install ok installed graphviz graphviz 2.42.4-2+b1 install ok installed grep grep 3.11-4 install ok installed gsettings-desktop-schemas gsettings-desktop-schemas 47.1-1 install ok installed gtk-update-icon-cache gtk-update-icon-cache 4.16.7+ds-1 install ok installed gzip gzip 1.12-1.1 install ok installed hicolor-icon-theme hicolor-icon-theme 0.18-1 install ok installed hostname hostname 3.25 install ok installed icu-devtools icu-devtools 72.1-5+b1 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed isympy-common isympy-common 1.13.3-1 install ok installed isympy3 isympy3 1.13.3-1 install ok installed iva iva 1.0.11+ds-6 install ok installed java-common java-common 0.76 install ok installed javascript-common javascript-common 11+nmu1 install ok installed kalign kalign 1:3.4.0-1+b1 install ok installed kmc kmc 3.2.4+dfsg-1+b1 install ok installed krb5-locales krb5-locales 1.21.3-3 install ok installed lagan lagan 2.0-10 install ok installed libabsl20230802:amd64 libabsl20230802 20230802.1-4 install ok installed libace-perl libace-perl 1.92-12+b1 install ok installed libacl1:amd64 libacl1 2.3.2-2+b1 install ok installed libaec0:amd64 libaec0 1.1.3-1+b1 install ok installed libalgorithm-diff-perl libalgorithm-diff-perl 1.201-1 install ok installed libalgorithm-diff-xs-perl:amd64 libalgorithm-diff-xs-perl 0.04-8+b4 install ok installed libalgorithm-merge-perl libalgorithm-merge-perl 0.08-5 install ok installed libalgorithm-munkres-perl libalgorithm-munkres-perl 0.08-5 install ok installed libann0 libann0 1.1.2+doc-9+b1 install ok installed libaom3:amd64 libaom3 3.11.0-1 install ok installed libapache-dbi-perl libapache-dbi-perl 1.12-3 install ok installed libapache2-mod-perl2 libapache2-mod-perl2 2.0.13-2+b1 install ok installed libapache2-reload-perl libapache2-reload-perl 0.14-1 install ok installed libapparmor1:amd64 libapparmor1 3.1.7-1+b3 install ok installed libapr1t64:amd64 libapr1t64 1.7.5-1 install ok installed libaprutil1-dbd-sqlite3:amd64 libaprutil1-dbd-sqlite3 1.6.3-3 install ok installed libaprutil1-ldap:amd64 libaprutil1-ldap 1.6.3-3 install ok installed libaprutil1t64:amd64 libaprutil1t64 1.6.3-3 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.16 install ok installed libargtable2-0 libargtable2-0 13-3 install ok installed libarmadillo14 libarmadillo14 1:14.2.1+dfsg-1+b1 install ok installed libarpack2t64:amd64 libarpack2t64 3.9.1-1.2+b1 install ok installed libarray-compare-perl libarray-compare-perl 3.0.8-1 install ok installed libasan8:amd64 libasan8 14.2.0-8 install ok installed libasound2-data libasound2-data 1.2.12-1 install ok installed libasound2t64:amd64 libasound2t64 1.2.12-1+b1 install ok installed libassuan9:amd64 libassuan9 3.0.1-2 install ok installed libatk-bridge2.0-0t64:amd64 libatk-bridge2.0-0t64 2.54.0-1 install ok installed libatk-wrapper-java libatk-wrapper-java 0.40.0-3 install ok installed libatk-wrapper-java-jni:amd64 libatk-wrapper-java-jni 0.40.0-3+b3 install ok installed libatk1.0-0t64:amd64 libatk1.0-0t64 2.54.0-1 install ok installed libatomic1:amd64 libatomic1 14.2.0-8 install ok installed libatspi2.0-0t64:amd64 libatspi2.0-0t64 2.54.0-1 install ok installed libattr1:amd64 libattr1 1:2.5.2-2 install ok installed libaudit-common libaudit-common 1:4.0.2-2 install ok installed libaudit1:amd64 libaudit1 1:4.0.2-2 install ok installed libauthen-sasl-perl libauthen-sasl-perl 2.1700-1 install ok installed libavahi-client3:amd64 libavahi-client3 0.8-15 install ok installed libavahi-common-data:amd64 libavahi-common-data 0.8-15 install ok installed libavahi-common3:amd64 libavahi-common3 0.8-15 install ok installed libavif16:amd64 libavif16 1.1.1-1 install ok installed libb-hooks-endofscope-perl libb-hooks-endofscope-perl 0.28-1 install ok installed libb-hooks-op-check-perl:amd64 libb-hooks-op-check-perl 0.22-3+b2 install ok installed libbambamc0:amd64 libbambamc0 0.0.50-6+b2 install ok installed libbinutils:amd64 libbinutils 2.43.50.20241204-2 install ok installed libbio-asn1-entrezgene-perl libbio-asn1-entrezgene-perl 1.730-3 install ok installed libbio-cluster-perl libbio-cluster-perl 1.7.3-6 install ok installed libbio-eutilities-perl libbio-eutilities-perl 1.77-2 install ok installed libbio-featureio-perl libbio-featureio-perl 1.6.905-2 install ok installed libbio-perl-perl libbio-perl-perl 1.7.8-1 install ok installed libbio-perl-run-perl libbio-perl-run-perl 1.7.3-13 install ok installed libbio-tools-run-remoteblast-perl libbio-tools-run-remoteblast-perl 1.7.3-3 install ok installed libbio-variation-perl libbio-variation-perl 1.7.5-3 install ok installed libbit-vector-perl:amd64 libbit-vector-perl 7.4-3+b2 install ok installed libblas-dev:amd64 libblas-dev 3.12.0-4 install ok installed libblas3:amd64 libblas3 3.12.0-4 install ok installed libblkid1:amd64 libblkid1 2.40.2-12 install ok installed libblosc1:amd64 libblosc1 1.21.5+ds-1+b2 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b6 install ok installed libbsd-resource-perl libbsd-resource-perl 1.2911-2+b4 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libbz2-dev:amd64 libbz2-dev 1.0.8-6 install ok installed libc-bin libc-bin 2.40-4 install ok installed libc-dev-bin libc-dev-bin 2.40-4 install ok installed libc6:amd64 libc6 2.40-4 install ok installed libc6-dev:amd64 libc6-dev 2.40-4 install ok installed libcache-cache-perl libcache-cache-perl 1.08-3 install ok installed libcairo-gobject2:amd64 libcairo-gobject2 1.18.2-2 install ok installed libcairo2:amd64 libcairo2 1.18.2-2 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-4 install ok installed libcap2:amd64 libcap2 1:2.66-5+b1 install ok installed libcapture-tiny-perl libcapture-tiny-perl 0.48-2 install ok installed libcarp-clan-perl libcarp-clan-perl 6.08-2 install ok installed libcc1-0:amd64 libcc1-0 14.2.0-8 install ok installed libcdt5:amd64 libcdt5 2.42.4-2+b1 install ok installed libcfitsio10t64:amd64 libcfitsio10t64 4.5.0-5 install ok installed libcgi-fast-perl libcgi-fast-perl 1:2.17-1 install ok installed libcgi-pm-perl libcgi-pm-perl 4.66-1 install ok installed libcgraph6:amd64 libcgraph6 2.42.4-2+b1 install ok installed libclass-data-inheritable-perl libclass-data-inheritable-perl 0.10-1 install ok installed libclass-inspector-perl libclass-inspector-perl 1.36-3 install ok installed libclass-method-modifiers-perl libclass-method-modifiers-perl 2.15-1 install ok installed libclass-xsaccessor-perl libclass-xsaccessor-perl 1.19-4+b4 install ok installed libclone-perl:amd64 libclone-perl 0.47-1+b1 install ok installed libcloudproviders0:amd64 libcloudproviders0 0.3.6-1+b1 install ok installed libcolord2:amd64 libcolord2 1.4.7-1+b2 install ok installed libcom-err2:amd64 libcom-err2 1.47.2~rc1-2 install ok installed libconvert-binary-c-perl libconvert-binary-c-perl 0.85-1+b1 install ok installed libconvert-binhex-perl libconvert-binhex-perl 1.125-3 install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.36-5 install ok installed libcrypt-rc4-perl libcrypt-rc4-perl 2.02-5 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libcryptsetup12:amd64 libcryptsetup12 2:2.7.5-1 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.43.50.20241204-2 install ok installed libctf0:amd64 libctf0 2.43.50.20241204-2 install ok installed libcups2t64:amd64 libcups2t64 2.4.10-2 install ok installed libcurl3t64-gnutls:amd64 libcurl3t64-gnutls 8.11.0-1 install ok installed libcurl4t64:amd64 libcurl4t64 8.11.0-1 install ok installed libdata-dump-perl libdata-dump-perl 1.25-1 install ok installed libdata-stag-perl libdata-stag-perl 0.14-3 install ok installed libdate-calc-perl libdate-calc-perl 6.4-2 install ok installed libdate-calc-xs-perl:amd64 libdate-calc-xs-perl 6.4-2+b4 install ok installed libdate-manip-perl libdate-manip-perl 6.96-1 install ok installed libdatrie1:amd64 libdatrie1 0.2.13-3+b1 install ok installed libdav1d7:amd64 libdav1d7 1.5.0-1+b1 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-9 install ok installed libdbd-mysql-perl:amd64 libdbd-mysql-perl 4.052-1+b3 install ok installed libdbd-pg-perl libdbd-pg-perl 3.18.0-1+b3 install ok installed libdbd-sqlite3-perl:amd64 libdbd-sqlite3-perl 1.76-1 install ok installed libdbi-perl:amd64 libdbi-perl 1.645-1+b1 install ok installed libdbus-1-3:amd64 libdbus-1-3 1.14.10-6 install ok installed libdconf1:amd64 libdconf1 0.40.0-4+b3 install ok installed libde265-0:amd64 libde265-0 1.0.15-1+b2 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.274 install ok installed libdeflate-dev:amd64 libdeflate-dev 1.22-1 install ok installed libdeflate0:amd64 libdeflate0 1.22-1 install ok installed libdevel-callchecker-perl:amd64 libdevel-callchecker-perl 0.009-1+b1 install ok installed libdevel-stacktrace-perl libdevel-stacktrace-perl 2.0500-1 install ok installed libdevel-symdump-perl libdevel-symdump-perl 2.18-5 install ok installed libdevmapper1.02.1:amd64 libdevmapper1.02.1 2:1.02.201-1 install ok installed libdigest-perl-md5-perl libdigest-perl-md5-perl 1.9-5 install ok installed libdpkg-perl libdpkg-perl 1.22.11 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.123-1 install ok installed libdrm-common libdrm-common 2.4.123-1 install ok installed libdrm-intel1:amd64 libdrm-intel1 2.4.123-1 install ok installed libdrm-radeon1:amd64 libdrm-radeon1 2.4.123-1 install ok installed libdrm2:amd64 libdrm2 2.4.123-1 install ok installed libdynaloader-functions-perl libdynaloader-functions-perl 0.004-1 install ok installed libedit2:amd64 libedit2 3.1-20240808-1 install ok installed libegl-mesa0:amd64 libegl-mesa0 24.2.8-1 install ok installed libegl1:amd64 libegl1 1.7.0-1+b2 install ok installed libelf1t64:amd64 libelf1t64 0.192-4 install ok installed libencode-locale-perl libencode-locale-perl 1.05-3 install ok installed libepoxy0:amd64 libepoxy0 1.5.10-2 install ok installed liberror-perl liberror-perl 0.17029-2 install ok installed libexception-class-perl libexception-class-perl 1.45-1 install ok installed libexpat1:amd64 libexpat1 2.6.4-1 install ok installed libexporter-tiny-perl libexporter-tiny-perl 1.006002-1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.2~rc1-2 install ok installed libfakeroot:amd64 libfakeroot 1.36-1 install ok installed libfcgi-bin libfcgi-bin 2.4.2-2.1+b1 install ok installed libfcgi-perl libfcgi-perl 0.82+ds-3+b2 install ok installed libfcgi0t64:amd64 libfcgi0t64 2.4.2-2.1+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libfile-basedir-perl libfile-basedir-perl 0.09-2 install ok installed libfile-desktopentry-perl libfile-desktopentry-perl 0.22-3 install ok installed libfile-fcntllock-perl libfile-fcntllock-perl 0.22-4+b4 install ok installed libfile-listing-perl libfile-listing-perl 6.16-1 install ok installed libfile-mimeinfo-perl libfile-mimeinfo-perl 0.35-1 install ok installed libfile-slurp-tiny-perl libfile-slurp-tiny-perl 0.004-2 install ok installed libfile-sort-perl libfile-sort-perl 1.01-3 install ok installed libfont-afm-perl libfont-afm-perl 1.20-4 install ok installed libfontconfig1:amd64 libfontconfig1 2.15.0-1.1+b1 install ok installed libfontenc1:amd64 libfontenc1 1:1.1.8-1+b1 install ok installed libfreetype6:amd64 libfreetype6 2.13.3+dfsg-1 install ok installed libfreexl1:amd64 libfreexl1 2.0.0-1+b3 install ok installed libfreezethaw-perl libfreezethaw-perl 0.5001-3 install ok installed libfribidi0:amd64 libfribidi0 1.0.15-1 install ok installed libfyba0t64:amd64 libfyba0t64 4.1.1-11+b1 install ok installed libgav1-1:amd64 libgav1-1 0.19.0-2+b2 install ok installed libgbm1:amd64 libgbm1 24.2.8-1 install ok installed libgcc-14-dev:amd64 libgcc-14-dev 14.2.0-8 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-8 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgd-perl libgd-perl 2.78-1+b3 install ok installed libgd3:amd64 libgd3 2.3.3-12+b1 install ok installed libgdal35:amd64 libgdal35 3.9.3+dfsg-1+b1 install ok installed libgdbm-compat4t64:amd64 libgdbm-compat4t64 1.24-2 install ok installed libgdbm6t64:amd64 libgdbm6t64 1.24-2 install ok installed libgdk-pixbuf-2.0-0:amd64 libgdk-pixbuf-2.0-0 2.42.12+dfsg-1+b1 install ok installed libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-bin 2.42.12+dfsg-1+b1 install ok installed libgdk-pixbuf2.0-common libgdk-pixbuf2.0-common 2.42.12+dfsg-1 install ok installed libgeos-c1t64:amd64 libgeos-c1t64 3.13.0-1 install ok installed libgeos3.13.0:amd64 libgeos3.13.0 3.13.0-1 install ok installed libgeotiff5:amd64 libgeotiff5 1.7.3-1+b1 install ok installed libgfortran-14-dev:amd64 libgfortran-14-dev 14.2.0-8 install ok installed libgfortran5:amd64 libgfortran5 14.2.0-8 install ok installed libgif7:amd64 libgif7 5.2.2-1+b1 install ok installed libgl1:amd64 libgl1 1.7.0-1+b2 install ok installed libgl1-mesa-dri:amd64 libgl1-mesa-dri 24.2.8-1 install ok installed libglapi-mesa:amd64 libglapi-mesa 24.2.8-1 install ok installed libgles2:amd64 libgles2 1.7.0-1+b2 install ok installed libglib2.0-0t64:amd64 libglib2.0-0t64 2.82.2-3 install ok installed libglib2.0-data libglib2.0-data 2.82.2-3 install ok installed libglvnd0:amd64 libglvnd0 1.7.0-1+b2 install ok installed libglx-mesa0:amd64 libglx-mesa0 24.2.8-1 install ok installed libglx0:amd64 libglx0 1.7.0-1+b2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-3 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.8-2 install ok installed libgomp1:amd64 libgomp1 14.2.0-8 install ok installed libgpg-error0:amd64 libgpg-error0 1.51-2 install ok installed libgpgme11t64:amd64 libgpgme11t64 1.24.0-2 install ok installed libgpgmepp6t64:amd64 libgpgmepp6t64 1.24.0-2 install ok installed libgpm2:amd64 libgpm2 1.20.7-11+b1 install ok installed libgprofng0:amd64 libgprofng0 2.43.50.20241204-2 install ok installed libgraph-perl libgraph-perl 1:0.9729-1 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-2+b1 install ok installed libgraphviz-perl libgraphviz-perl 2.24-1 install ok installed libgs-common libgs-common 10.04.0~dfsg-2 install ok installed libgs10:amd64 libgs10 10.04.0~dfsg-2 install ok installed libgs10-common libgs10-common 10.04.0~dfsg-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-3 install ok installed libgtk-3-0t64:amd64 libgtk-3-0t64 3.24.43-4 install ok installed libgtk-3-bin libgtk-3-bin 3.24.43-4 install ok installed libgtk-3-common libgtk-3-common 3.24.43-4 install ok installed libgts-0.7-5t64:amd64 libgts-0.7-5t64 0.7.6+darcs121130-5.2+b1 install ok installed libgts-bin libgts-bin 0.7.6+darcs121130-5.2+b1 install ok installed libgvc6 libgvc6 2.42.4-2+b1 install ok installed libgvpr2:amd64 libgvpr2 2.42.4-2+b1 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 10.0.1-1 install ok installed libhdf4-0-alt:amd64 libhdf4-0-alt 4.3.0-1+b1 install ok installed libhdf5-103-1t64:amd64 libhdf5-103-1t64 1.10.10+repack-5+b1 install ok installed libhdf5-hl-100t64:amd64 libhdf5-hl-100t64 1.10.10+repack-5+b1 install ok installed libheap-perl libheap-perl 0.80-5 install ok installed libheif-plugin-aomenc:amd64 libheif-plugin-aomenc 1.19.3-1 install ok installed libheif-plugin-dav1d:amd64 libheif-plugin-dav1d 1.19.3-1 install ok installed libheif-plugin-libde265:amd64 libheif-plugin-libde265 1.19.3-1 install ok installed libheif-plugin-x265:amd64 libheif-plugin-x265 1.19.3-1 install ok installed libheif1:amd64 libheif1 1.19.3-1 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1+b1 install ok installed libhtml-form-perl libhtml-form-perl 6.12-1 install ok installed libhtml-format-perl libhtml-format-perl 2.16-2 install ok installed libhtml-parser-perl:amd64 libhtml-parser-perl 3.83-1+b1 install ok installed libhtml-tableextract-perl libhtml-tableextract-perl 2.15-2 install ok installed libhtml-tagset-perl libhtml-tagset-perl 3.24-1 install ok installed libhtml-tree-perl libhtml-tree-perl 5.07-3 install ok installed libhts3t64:amd64 libhts3t64 1.20+ds-2 install ok installed libhtscodecs2:amd64 libhtscodecs2 1.6.1-1 install ok installed libhttp-cookies-perl libhttp-cookies-perl 6.11-1 install ok installed libhttp-daemon-perl libhttp-daemon-perl 6.16-1 install ok installed libhttp-date-perl libhttp-date-perl 6.06-1 install ok installed libhttp-message-perl libhttp-message-perl 7.00-2 install ok installed libhttp-negotiate-perl libhttp-negotiate-perl 6.01-2 install ok installed libhwasan0:amd64 libhwasan0 14.2.0-8 install ok installed libice6:amd64 libice6 2:1.1.1-1 install ok installed libicu-dev:amd64 libicu-dev 72.1-5+b1 install ok installed libicu72:amd64 libicu72 72.1-5+b1 install ok installed libidn12:amd64 libidn12 1.42-2+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2+b1 install ok installed libijs-0.35:amd64 libijs-0.35 0.35-15.1+b2 install ok installed libimagequant0:amd64 libimagequant0 2.18.0-1+b2 install ok installed libimport-into-perl libimport-into-perl 1.002005-2 install ok installed libio-compress-brotli-perl libio-compress-brotli-perl 0.004001-2+b3 install ok installed libio-html-perl libio-html-perl 1.004-3 install ok installed libio-pty-perl libio-pty-perl 1:1.20-1+b2 install ok installed libio-sessiondata-perl libio-sessiondata-perl 1.03-3 install ok installed libio-socket-ssl-perl libio-socket-ssl-perl 2.089-1 install ok installed libio-string-perl libio-string-perl 1.08-4 install ok installed libio-stringy-perl libio-stringy-perl 2.113-2 install ok installed libipc-run-perl libipc-run-perl 20231003.0-2 install ok installed libipc-sharelite-perl libipc-sharelite-perl 0.17-5+b3 install ok installed libipc-system-simple-perl libipc-system-simple-perl 1.30-2 install ok installed libisl23:amd64 libisl23 0.27-1 install ok installed libitm1:amd64 libitm1 14.2.0-8 install ok installed libjansson4:amd64 libjansson4 2.14-2+b3 install ok installed libjbig0:amd64 libjbig0 2.1-6.1+b2 install ok installed libjbig2dec0:amd64 libjbig2dec0 0.20-1+b3 install ok installed libjbzip2-java libjbzip2-java 0.9.1-8 install ok installed libjcode-pm-perl libjcode-pm-perl 2.06-1.1 install ok installed libjpeg-dev:amd64 libjpeg-dev 1:2.1.5-3+b1 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-3+b1 install ok installed libjpeg62-turbo-dev:amd64 libjpeg62-turbo-dev 1:2.1.5-3+b1 install ok installed libjs-jquery libjs-jquery 3.6.1+dfsg+~3.5.14-1 install ok installed libjs-jquery-ui libjs-jquery-ui 1.13.2+dfsg-1 install ok installed libjson-c5:amd64 libjson-c5 0.18+ds-1 install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-4 install ok installed libkmlbase1t64:amd64 libkmlbase1t64 1.3.0-12+b1 install ok installed libkmldom1t64:amd64 libkmldom1t64 1.3.0-12+b1 install ok installed libkmlengine1t64:amd64 libkmlengine1t64 1.3.0-12+b1 install ok installed libkmod2:amd64 libkmod2 33+20240816-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-3 install ok installed libksba8:amd64 libksba8 1.6.7-2+b1 install ok installed liblab-gamut1:amd64 liblab-gamut1 2.42.4-2+b1 install ok installed liblapack-dev:amd64 liblapack-dev 3.12.0-4 install ok installed liblapack3:amd64 liblapack3 3.12.0-4 install ok installed liblbfgsb0:amd64 liblbfgsb0 3.0+dfsg.4-1+b2 install ok installed liblcms2-2:amd64 liblcms2-2 2.16-2 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.18+dfsg-3+b1 install ok installed libldap-common libldap-common 2.5.18+dfsg-3 install ok installed liblerc4:amd64 liblerc4 4.0.0+ds-5 install ok installed liblist-moreutils-perl liblist-moreutils-perl 0.430-2 install ok installed liblist-moreutils-xs-perl liblist-moreutils-xs-perl 0.430-4+b2 install ok installed libllvm19:amd64 libllvm19 1:19.1.4-1 install ok installed liblmdb0:amd64 liblmdb0 0.9.31-1+b2 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.07-7+b1 install ok installed liblsan0:amd64 liblsan0 14.2.0-8 install ok installed libltdl7:amd64 libltdl7 2.4.7-8 install ok installed liblua5.4-0:amd64 liblua5.4-0 5.4.7-1+b1 install ok installed liblwp-mediatypes-perl liblwp-mediatypes-perl 6.04-2 install ok installed liblwp-protocol-https-perl liblwp-protocol-https-perl 6.14-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3+b1 install ok installed liblzma-dev:amd64 liblzma-dev 5.6.3-1+b1 install ok installed liblzma5:amd64 liblzma5 5.6.3-1+b1 install ok installed libmagic-mgc libmagic-mgc 1:5.45-3+b1 install ok installed libmagic1t64:amd64 libmagic1t64 1:5.45-3+b1 install ok installed libmailtools-perl libmailtools-perl 2.22-1 install ok installed libmariadb3:amd64 libmariadb3 1:11.4.3-1 install ok installed libmath-derivative-perl libmath-derivative-perl 1.01-3 install ok installed libmath-spline-perl libmath-spline-perl 0.02-4 install ok installed libmbedcrypto16:amd64 libmbedcrypto16 3.6.2-3 install ok installed libmbedtls21:amd64 libmbedtls21 3.6.2-3 install ok installed libmbedx509-7:amd64 libmbedx509-7 3.6.2-3 install ok installed libmd0:amd64 libmd0 1.1.0-2+b1 install ok installed libmime-tools-perl libmime-tools-perl 5.515-1 install ok installed libminizip1t64:amd64 libminizip1t64 1:1.3.dfsg+really1.3.1-1+b1 install ok installed libmldbm-perl libmldbm-perl 2.05-4 install ok installed libmodule-implementation-perl libmodule-implementation-perl 0.09-2 install ok installed libmodule-runtime-perl libmodule-runtime-perl 0.016-2 install ok installed libmoo-perl libmoo-perl 2.005005-1 install ok installed libmount1:amd64 libmount1 2.40.2-12 install ok installed libmpc3:amd64 libmpc3 1.3.1-1+b3 install ok installed libmpfr6:amd64 libmpfr6 4.2.1-1+b2 install ok installed libnamespace-clean-perl libnamespace-clean-perl 0.27-2 install ok installed libncurses-dev:amd64 libncurses-dev 6.5-2+b1 install ok installed libncurses6:amd64 libncurses6 6.5-2+b1 install ok installed libncursesw6:amd64 libncursesw6 6.5-2+b1 install ok installed libnet-dbus-perl libnet-dbus-perl 1.2.0-2+b3 install ok installed libnet-http-perl libnet-http-perl 6.23-1 install ok installed libnet-smtp-ssl-perl libnet-smtp-ssl-perl 1.04-2 install ok installed libnet-ssleay-perl:amd64 libnet-ssleay-perl 1.94-2 install ok installed libnetcdf19t64:amd64 libnetcdf19t64 1:4.9.2-7 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1+b1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.64.0-1 install ok installed libnghttp3-9:amd64 libnghttp3-9 1.6.0-2 install ok installed libngtcp2-16:amd64 libngtcp2-16 1.9.1-1 install ok installed libngtcp2-crypto-gnutls8:amd64 libngtcp2-crypto-gnutls8 1.9.1-1 install ok installed libnpth0t64:amd64 libnpth0t64 1.6-3.1+b1 install ok installed libnsl2:amd64 libnsl2 1.3.0-3+b3 install ok installed libnspr4:amd64 libnspr4 2:4.36-1 install ok installed libnss-systemd:amd64 libnss-systemd 257~rc3-1 install ok installed libnss3:amd64 libnss3 2:3.106-1 install ok installed libnuma1:amd64 libnuma1 2.0.18-1+b1 install ok installed libodbc2:amd64 libodbc2 2.3.12-1+b3 install ok installed libodbcinst2:amd64 libodbcinst2 2.3.12-1+b3 install ok installed libogdi4.1:amd64 libogdi4.1 4.1.1+ds-5 install ok installed libole-storage-lite-perl libole-storage-lite-perl 0.22-1 install ok installed libopenjp2-7:amd64 libopenjp2-7 2.5.0-2+b4 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2+b1 install ok installed libpackage-stash-perl libpackage-stash-perl 0.40-1 install ok installed libpackage-stash-xs-perl:amd64 libpackage-stash-xs-perl 0.30-1+b4 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7+b1 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam-systemd:amd64 libpam-systemd 257~rc3-1 install ok installed libpam0g:amd64 libpam0g 1.5.3-7+b1 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.55.0+ds-3 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.55.0+ds-3 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.55.0+ds-3 install ok installed libpaper-utils libpaper-utils 1.1.29+b2 install ok installed libpaper1:amd64 libpaper1 1.1.29+b2 install ok installed libparams-classify-perl:amd64 libparams-classify-perl 0.015-2+b4 install ok installed libparse-recdescent-perl libparse-recdescent-perl 1.967015+dfsg-4 install ok installed libpathplan4:amd64 libpathplan4 2.42.4-2+b1 install ok installed libpciaccess0:amd64 libpciaccess0 0.17-3+b2 install ok installed libpcre2-16-0:amd64 libpcre2-16-0 10.44-4 install ok installed libpcre2-32-0:amd64 libpcre2-32-0 10.44-4 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.44-4 install ok installed libpcre2-dev:amd64 libpcre2-dev 10.44-4 install ok installed libpcre2-posix3:amd64 libpcre2-posix3 10.44-4 install ok installed libpcsclite1:amd64 libpcsclite1 2.3.0-3 install ok installed libperl5.40:amd64 libperl5.40 5.40.0-8 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.44.0-3 install ok installed libpkgconf3:amd64 libpkgconf3 1.8.1-4 install ok installed libpng-dev:amd64 libpng-dev 1.6.44-2 install ok installed libpng-tools libpng-tools 1.6.44-2 install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.44-2 install ok installed libpoppler140:amd64 libpoppler140 24.08.0-3 install ok installed libpostscript-perl libpostscript-perl 0.06-3.1 install ok installed libpq5:amd64 libpq5 17.2-1 install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-6 install ok installed libproj25:amd64 libproj25 9.5.1-1 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.2-1.1+b1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.12.6-1 install ok installed libpython3.12-minimal:amd64 libpython3.12-minimal 3.12.8-1 install ok installed libpython3.12-stdlib:amd64 libpython3.12-stdlib 3.12.8-1 install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-6+b2 install ok installed libquadmath0:amd64 libquadmath0 14.2.0-8 install ok installed libraqm0:amd64 libraqm0 0.10.1-1+b2 install ok installed librav1e0.7:amd64 librav1e0.7 0.7.1-7+b2 install ok installed libreadline-dev:amd64 libreadline-dev 8.2-5 install ok installed libreadline8t64:amd64 libreadline8t64 8.2-5 install ok installed libreadonly-perl libreadonly-perl 2.050-3 install ok installed libref-util-perl libref-util-perl 0.204-2 install ok installed libref-util-xs-perl libref-util-xs-perl 0.117-2+b4 install ok installed librole-tiny-perl librole-tiny-perl 2.002004-1 install ok installed librsvg2-2:amd64 librsvg2-2 2.59.1+dfsg-1 install ok installed librsvg2-common:amd64 librsvg2-common 2.59.1+dfsg-1 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b5 install ok installed librttopo1:amd64 librttopo1 1.1.0-3+b2 install ok installed libruby:amd64 libruby 1:3.1+nmu1 install ok installed libruby3.1t64:amd64 libruby3.1t64 3.1.2-8.4 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-8 install ok installed libsasl2-modules:amd64 libsasl2-modules 2.1.28+dfsg1-8 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-8 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-2 install ok installed libselinux1:amd64 libselinux1 3.7-3+b1 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2+b1 install ok installed libsensors-config libsensors-config 1:3.6.0-10 install ok installed libsensors5:amd64 libsensors5 1:3.6.0-10+b1 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libset-object-perl libset-object-perl 1.42-1+b5 install ok installed libset-scalar-perl libset-scalar-perl 1.29-3 install ok installed libsframe1:amd64 libsframe1 2.43.50.20241204-2 install ok installed libsharpyuv0:amd64 libsharpyuv0 1.4.0-0.1+b1 install ok installed libsigsegv2:amd64 libsigsegv2 2.14-1+b2 install ok installed libsm6:amd64 libsm6 2:1.2.4-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-12 install ok installed libsnappy1v5:amd64 libsnappy1v5 1.2.1-1+b1 install ok installed libsoap-lite-perl libsoap-lite-perl 1.27-3 install ok installed libsort-naturally-perl libsort-naturally-perl 1.03-4 install ok installed libspatialite8t64:amd64 libspatialite8t64 5.1.0-3+b2 install ok installed libspreadsheet-parseexcel-perl libspreadsheet-parseexcel-perl 0.6600-1 install ok installed libspreadsheet-writeexcel-perl libspreadsheet-writeexcel-perl 2.40-4 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.1-1 install ok installed libss2:amd64 libss2 1.47.2~rc1-2 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-2 install ok installed libstatistics-descriptive-perl libstatistics-descriptive-perl 3.0801-1 install ok installed libstdc++-14-dev:amd64 libstdc++-14-dev 14.2.0-8 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-8 install ok installed libsub-exporter-progressive-perl libsub-exporter-progressive-perl 0.001013-3 install ok installed libsub-identify-perl libsub-identify-perl 0.14-3+b3 install ok installed libsub-name-perl:amd64 libsub-name-perl 0.27-1+b3 install ok installed libsub-quote-perl libsub-quote-perl 2.006008-1 install ok installed libsub-uplevel-perl libsub-uplevel-perl 0.2800-3 install ok installed libsvg-graph-perl libsvg-graph-perl 0.02-4 install ok installed libsvg-perl libsvg-perl 2.87-1 install ok installed libsvtav1enc2:amd64 libsvtav1enc2 2.2.1+dfsg-2 install ok installed libsystemd-shared:amd64 libsystemd-shared 257~rc3-1 install ok installed libsystemd0:amd64 libsystemd0 257~rc3-1 install ok installed libsz2:amd64 libsz2 1.1.3-1+b1 install ok installed libtask-weaken-perl libtask-weaken-perl 1.06-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b3 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.15+dfsg-2 install ok installed libtest-deep-perl libtest-deep-perl 1.204-1 install ok installed libtest-differences-perl libtest-differences-perl 0.71-1 install ok installed libtest-exception-perl libtest-exception-perl 0.43-3 install ok installed libtest-most-perl libtest-most-perl 0.38-1 install ok installed libtest-requiresinternet-perl libtest-requiresinternet-perl 0.05-4 install ok installed libtest-warn-perl libtest-warn-perl 0.37-2 install ok installed libtext-csv-perl libtext-csv-perl 2.04-1 install ok installed libtext-csv-xs-perl:amd64 libtext-csv-xs-perl 1.57-1 install ok installed libtext-diff-perl libtext-diff-perl 1.45-2 install ok installed libtext-iconv-perl:amd64 libtext-iconv-perl 1.7-8+b4 install ok installed libthai-data libthai-data 0.1.29-2 install ok installed libthai0:amd64 libthai0 0.1.29-2+b1 install ok installed libtie-ixhash-perl libtie-ixhash-perl 1.23-4 install ok installed libtiff6:amd64 libtiff6 4.5.1+git230720-5 install ok installed libtimedate-perl libtimedate-perl 2.3300-2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2+b1 install ok installed libtirpc-common libtirpc-common 1.3.4+ds-1.3 install ok installed libtirpc-dev:amd64 libtirpc-dev 1.3.4+ds-1.3+b1 install ok installed libtirpc3t64:amd64 libtirpc3t64 1.3.4+ds-1.3+b1 install ok installed libtk8.6:amd64 libtk8.6 8.6.15-1 install ok installed libtree-dagnode-perl libtree-dagnode-perl 1.32-1 install ok installed libtry-tiny-perl libtry-tiny-perl 0.32-1 install ok installed libtsan2:amd64 libtsan2 14.2.0-8 install ok installed libtype-tiny-perl libtype-tiny-perl 2.004000-1 install ok installed libtype-tiny-xs-perl:amd64 libtype-tiny-xs-perl 0.025-2+b1 install ok installed libubsan1:amd64 libubsan1 14.2.0-8 install ok installed libudev1:amd64 libudev1 257~rc3-1 install ok installed libunicode-map-perl libunicode-map-perl 0.112-13+b4 install ok installed libunistring5:amd64 libunistring5 1.3-1 install ok installed liburi-perl liburi-perl 5.30-1 install ok installed liburiparser1:amd64 liburiparser1 0.9.8+dfsg-2 install ok installed libuuid1:amd64 libuuid1 2.40.2-12 install ok installed libuv1t64:amd64 libuv1t64 1.48.0-7 install ok installed libvariable-magic-perl libvariable-magic-perl 0.64-1+b1 install ok installed libvulkan1:amd64 libvulkan1 1.3.296.0-1 install ok installed libwayland-client0:amd64 libwayland-client0 1.23.0-1+b1 install ok installed libwayland-cursor0:amd64 libwayland-cursor0 1.23.0-1+b1 install ok installed libwayland-egl1:amd64 libwayland-egl1 1.23.0-1+b1 install ok installed libwayland-server0:amd64 libwayland-server0 1.23.0-1+b1 install ok installed libwebp7:amd64 libwebp7 1.4.0-0.1+b1 install ok installed libwebpdemux2:amd64 libwebpdemux2 1.4.0-0.1+b1 install ok installed libwebpmux3:amd64 libwebpmux3 1.4.0-0.1+b1 install ok installed libwww-perl libwww-perl 6.77-1 install ok installed libwww-robotrules-perl libwww-robotrules-perl 6.02-1 install ok installed libx11-6:amd64 libx11-6 2:1.8.10-2 install ok installed libx11-data libx11-data 2:1.8.10-2 install ok installed libx11-protocol-perl libx11-protocol-perl 0.56-9 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.8.10-2 install ok installed libx265-209:amd64 libx265-209 3.6-3+b1 install ok installed libxau6:amd64 libxau6 1:1.0.11-1 install ok installed libxaw7:amd64 libxaw7 2:1.0.16-1 install ok installed libxcb-dri2-0:amd64 libxcb-dri2-0 1.17.0-2+b1 install ok installed libxcb-dri3-0:amd64 libxcb-dri3-0 1.17.0-2+b1 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.17.0-2+b1 install ok installed libxcb-present0:amd64 libxcb-present0 1.17.0-2+b1 install ok installed libxcb-randr0:amd64 libxcb-randr0 1.17.0-2+b1 install ok installed libxcb-render0:amd64 libxcb-render0 1.17.0-2+b1 install ok installed libxcb-shape0:amd64 libxcb-shape0 1.17.0-2+b1 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.17.0-2+b1 install ok installed libxcb-sync1:amd64 libxcb-sync1 1.17.0-2+b1 install ok installed libxcb-xfixes0:amd64 libxcb-xfixes0 1.17.0-2+b1 install ok installed libxcb1:amd64 libxcb1 1.17.0-2+b1 install ok installed libxcomposite1:amd64 libxcomposite1 1:0.4.6-1 install ok installed libxcursor1:amd64 libxcursor1 1:1.2.2-1+b1 install ok installed libxdamage1:amd64 libxdamage1 1:1.1.6-1+b2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.5-1 install ok installed libxerces-c3.2t64:amd64 libxerces-c3.2t64 3.2.4+debian-1.3+b1 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b2 install ok installed libxfixes3:amd64 libxfixes3 1:6.0.0-2+b2 install ok installed libxft2:amd64 libxft2 2.3.6-1+b2 install ok installed libxi6:amd64 libxi6 2:1.8.2-1 install ok installed libxinerama1:amd64 libxinerama1 2:1.1.4-3+b2 install ok installed libxkbcommon0:amd64 libxkbcommon0 1.6.0-1+b2 install ok installed libxkbfile1:amd64 libxkbfile1 1:1.1.0-1+b2 install ok installed libxml-dom-perl libxml-dom-perl 1.46-2 install ok installed libxml-dom-xpath-perl libxml-dom-xpath-perl 0.14-4 install ok installed libxml-filter-buffertext-perl libxml-filter-buffertext-perl 1.01-7 install ok installed libxml-libxml-perl libxml-libxml-perl 2.0207+dfsg+really+2.0134-5+b1 install ok installed libxml-libxslt-perl:amd64 libxml-libxslt-perl 2.003000-2+b1 install ok installed libxml-namespacesupport-perl libxml-namespacesupport-perl 1.12-2 install ok installed libxml-parser-perl libxml-parser-perl 2.47-1+b3 install ok installed libxml-perl libxml-perl 0.08-4 install ok installed libxml-regexp-perl libxml-regexp-perl 0.04-1.1 install ok installed libxml-sax-base-perl libxml-sax-base-perl 1.09-3 install ok installed libxml-sax-expat-perl libxml-sax-expat-perl 0.51-2 install ok installed libxml-sax-perl libxml-sax-perl 1.02+dfsg-4 install ok installed libxml-sax-writer-perl libxml-sax-writer-perl 0.57-3 install ok installed libxml-simple-perl libxml-simple-perl 2.25-2 install ok installed libxml-twig-perl libxml-twig-perl 1:3.52-3 install ok installed libxml-writer-perl libxml-writer-perl 0.900-2 install ok installed libxml-xpath-perl libxml-xpath-perl 1.48-1 install ok installed libxml-xpathengine-perl libxml-xpathengine-perl 0.14-2 install ok installed libxml2:amd64 libxml2 2.12.7+dfsg+really2.9.14-0.2+b1 install ok installed libxmlrpc-lite-perl libxmlrpc-lite-perl 0.717-5 install ok installed libxmu6:amd64 libxmu6 2:1.1.3-3+b3 install ok installed libxmuu1:amd64 libxmuu1 2:1.1.3-3+b3 install ok installed libxpm4:amd64 libxpm4 1:3.5.17-1+b2 install ok installed libxrandr2:amd64 libxrandr2 2:1.5.4-1+b1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1.1+b2 install ok installed libxshmfence1:amd64 libxshmfence1 1.3-1+b2 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.35-1.1+b1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1+b2 install ok installed libxstring-perl:amd64 libxstring-perl 0.005-2+b4 install ok installed libxt6t64:amd64 libxt6t64 1:1.2.1-1.2+b1 install ok installed libxtst6:amd64 libxtst6 2:1.2.3-1.1+b2 install ok installed libxv1:amd64 libxv1 2:1.0.11-1.1+b2 install ok installed libxxf86dga1:amd64 libxxf86dga1 2:1.1.5-1+b2 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.4-1+b3 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b2 install ok installed libyaml-0-2:amd64 libyaml-0-2 0.2.5-1+b2 install ok installed libyaml-libyaml-perl libyaml-libyaml-perl 0.902.0+ds-2+b1 install ok installed libyaml-perl libyaml-perl 1.31-1 install ok installed libyuv0:amd64 libyuv0 0.0.1898.20241125-1 install ok installed libz3-4:amd64 libz3-4 4.13.3-1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1+b1 install ok installed linux-libc-dev linux-libc-dev 6.11.10-1 install ok installed linux-sysctl-defaults linux-sysctl-defaults 4.10.1 install ok installed login login 1:4.16.0-2+really2.40.2-12 install ok installed login.defs login.defs 1:4.16.0-5 install ok installed logsave logsave 1.47.2~rc1-2 install ok installed luit luit 2.0.20240910-1 install ok installed lynx lynx 2.9.2-1 install ok installed lynx-common lynx-common 2.9.2-1 install ok installed mafft mafft 7.505-1 install ok installed mailcap mailcap 3.74 install ok installed make make 4.3-4.1 install ok installed manpages manpages 6.9.1-1 install ok installed manpages-dev manpages-dev 6.9.1-1 install ok installed maq maq 0.7.1-10 install ok installed mariadb-common mariadb-common 1:11.4.3-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed med-config med-config 3.8.1 install ok installed media-types media-types 10.1.0 install ok installed menu menu 2.1.50 install ok installed mesa-libgallium:amd64 mesa-libgallium 24.2.8-1 install ok installed mesa-vulkan-drivers:amd64 mesa-vulkan-drivers 24.2.8-1 install ok installed mount mount 2.40.2-12 install ok installed mummer mummer 3.23+dfsg-8 install ok installed muscle muscle 1:5.1.0-1 install ok installed mustang mustang 3.2.4-1 install ok installed mysql-common mysql-common 5.8+1.1.1 install ok installed ncbi-blast+ ncbi-blast+ 2.16.0+ds-6+b1 install ok installed ncbi-blast+-legacy ncbi-blast+-legacy 2.16.0+ds-6 install ok installed ncbi-data ncbi-data 6.1.20170106+dfsg2-5 install ok installed ncoils ncoils 2002-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2+b1 install ok installed netbase netbase 6.4 install ok installed openjdk-21-jdk-headless:amd64 openjdk-21-jdk-headless 21.0.5+11-1 install ok installed openjdk-21-jre:amd64 openjdk-21-jre 21.0.5+11-1 install ok installed openjdk-21-jre-headless:amd64 openjdk-21-jre-headless 21.0.5+11-1 install ok installed openssl openssl 3.3.2-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-2 install ok installed pal2nal pal2nal 14.1-3 install ok installed paml paml 4.9j+dfsg-5 install ok installed passwd passwd 1:4.16.0-5 install ok installed patch patch 2.7.6-7 install ok installed perl perl 5.40.0-8 install ok installed perl-base perl-base 5.40.0-8 install ok installed perl-doc perl-doc 5.40.0-8 install ok installed perl-modules-5.40 perl-modules-5.40 5.40.0-8 install ok installed perl-openssl-defaults:amd64 perl-openssl-defaults 7+b2 install ok installed perl-tk perl-tk 1:804.036+dfsg1-3+b1 install ok installed phylip phylip 1:3.697+dfsg-4 install ok installed pinentry-curses pinentry-curses 1.2.1-4+b1 install ok installed pkgconf:amd64 pkgconf 1.8.1-4 install ok installed pkgconf-bin pkgconf-bin 1.8.1-4 install ok installed poa poa 2.0+20060928-9 install ok installed poppler-data poppler-data 0.4.12-1 install ok installed prank prank 0.0.170427+dfsg-3 install ok installed primer3 primer3 2.6.1-5 install ok installed probalign probalign 1.4-10 install ok installed probcons probcons 1.12-14 install ok installed procps procps 2:4.0.4-6 install ok installed proda proda 1.0-14 install ok installed proj-bin proj-bin 9.5.1-1 install ok installed proj-data proj-data 9.5.1-1 install ok installed psmisc psmisc 23.7-1 install ok installed publicsuffix publicsuffix 20241025.1547-0.1 install ok installed python-matplotlib-data python-matplotlib-data 3.8.3-3 install ok installed python3 python3 3.12.6-1 install ok installed python3-appdirs python3-appdirs 1.4.4-4 install ok installed python3-attr python3-attr 23.2.0-2 install ok installed python3-autocommand python3-autocommand 2.2.2-3 install ok installed python3-brotli python3-brotli 1.1.0-2+b6 install ok installed python3-bs4 python3-bs4 4.12.3-3 install ok installed python3-chardet python3-chardet 5.2.0+dfsg-1 install ok installed python3-contourpy python3-contourpy 1.3.1-1 install ok installed python3-cssselect python3-cssselect 1.2.0-4 install ok installed python3-cycler python3-cycler 0.12.1-1 install ok installed python3-dateutil python3-dateutil 2.9.0-3 install ok installed python3-decorator python3-decorator 5.1.1-5 install ok installed python3-fonttools python3-fonttools 4.55.0-3 install ok installed python3-fs python3-fs 2.4.16-5 install ok installed python3-gdal python3-gdal 3.9.3+dfsg-1+b1 install ok installed python3-html5lib python3-html5lib 1.2-1 install ok installed python3-inflect python3-inflect 7.3.1-2 install ok installed python3-jaraco.context python3-jaraco.context 6.0.0-1 install ok installed python3-jaraco.functools python3-jaraco.functools 4.1.0-1 install ok installed python3-kiwisolver python3-kiwisolver 1.4.7-2+b1 install ok installed python3-lxml:amd64 python3-lxml 5.3.0-1+b1 install ok installed python3-lz4 python3-lz4 4.4.0+dfsg-1 install ok installed python3-matplotlib python3-matplotlib 3.8.3-3+b1 install ok installed python3-minimal python3-minimal 3.12.6-1 install ok installed python3-more-itertools python3-more-itertools 10.5.0-1 install ok installed python3-mpmath python3-mpmath 1.3.0-1 install ok installed python3-networkx python3-networkx 3.2.1-5 install ok installed python3-numpy python3-numpy 1:1.26.4+ds-12 install ok installed python3-olefile python3-olefile 0.47-1 install ok installed python3-packaging python3-packaging 24.2-1 install ok installed python3-pil:amd64 python3-pil 10.4.0-1+b1 install ok installed python3-pil.imagetk:amd64 python3-pil.imagetk 10.4.0-1+b1 install ok installed python3-pkg-resources python3-pkg-resources 75.2.0-1 install ok installed python3-pydot python3-pydot 2.0.0-3 install ok installed python3-pygraphviz python3-pygraphviz 1.14-1+b1 install ok installed python3-pyparsing python3-pyparsing 3.1.2-1 install ok installed python3-pysam python3-pysam 0.22.1+ds-2+b2 install ok installed python3-scipy python3-scipy 1.13.1-6 install ok installed python3-soupsieve python3-soupsieve 2.6-1 install ok installed python3-sympy python3-sympy 1.13.3-1 install ok installed python3-tk:amd64 python3-tk 3.12.7-1 install ok installed python3-typeguard python3-typeguard 4.4.1-1 install ok installed python3-typing-extensions python3-typing-extensions 4.12.2-2 install ok installed python3-tz python3-tz 2024.1-2 install ok installed python3-ufolib2 python3-ufolib2 0.17.0+dfsg1-1 install ok installed python3-unicodedata2 python3-unicodedata2 15.1.0+ds-1+b3 install ok installed python3-webencodings python3-webencodings 0.5.1-5 install ok installed python3-yaml python3-yaml 6.0.2-1+b1 install ok installed python3.12 python3.12 3.12.8-1 install ok installed python3.12-minimal python3.12-minimal 3.12.8-1 install ok installed python3.12-tk python3.12-tk 3.12.8-1 install ok installed python3.13-tk python3.13-tk 3.13.1-1 install ok installed r-base-core r-base-core 4.4.2-1 install ok installed r-base-dev r-base-dev 4.4.2-1 install ok installed r-cran-boot r-cran-boot 1.3-31-1 install ok installed r-cran-class r-cran-class 7.3-22-2 install ok installed r-cran-cluster r-cran-cluster 2.1.6-1 install ok installed r-cran-codetools r-cran-codetools 0.2-20-1 install ok installed r-cran-foreign r-cran-foreign 0.8.87-1 install ok installed r-cran-kernsmooth r-cran-kernsmooth 2.23-24-1 install ok installed r-cran-lattice r-cran-lattice 0.22-6-1 install ok installed r-cran-mass r-cran-mass 7.3-61-1 install ok installed r-cran-matrix r-cran-matrix 1.7-1-1 install ok installed r-cran-mgcv r-cran-mgcv 1.9-1-1 install ok installed r-cran-nlme r-cran-nlme 3.1.166-1 install ok installed r-cran-nnet r-cran-nnet 7.3-19-2 install ok installed r-cran-rpart r-cran-rpart 4.1.23-1 install ok installed r-cran-spatial r-cran-spatial 7.3-17-1 install ok installed r-cran-survival r-cran-survival 3.7-0-1 install ok installed r-doc-html r-doc-html 4.4.2-1 install ok installed r-recommended r-recommended 4.4.2-1 install ok installed rake rake 13.2.1-1 install ok installed raxml raxml 8.2.13+dfsg-1+b1 install ok installed readline-common readline-common 8.2-5 install ok installed rpcsvc-proto rpcsvc-proto 1.4.3-1 install ok installed ruby ruby 1:3.1+nmu1 install ok installed ruby-net-telnet ruby-net-telnet 0.2.0-1 install ok installed ruby-rubygems ruby-rubygems 3.4.20-1 install ok installed ruby-sdbm:amd64 ruby-sdbm 1.0.0-5+b5 install ok installed ruby-webrick ruby-webrick 1.8.1-1 install ok installed ruby-xmlrpc ruby-xmlrpc 0.3.3-2 install ok installed ruby3.1 ruby3.1 3.1.2-8.4 install ok installed rubygems-integration rubygems-integration 1.18 install ok installed samtools samtools 1.20-3 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.24 install ok installed shared-mime-info shared-mime-info 2.4-5+b1 install ok installed sim4 sim4 0.0.20121010-8 install ok installed smalt smalt 0.7.6-13 install ok installed systemd systemd 257~rc3-1 install ok installed systemd-cryptsetup systemd-cryptsetup 257~rc3-1 install ok installed systemd-sysv systemd-sysv 257~rc3-1 install ok installed systemd-timesyncd systemd-timesyncd 257~rc3-1 install ok installed sysvinit-utils sysvinit-utils 3.11-1 install ok installed t-coffee t-coffee 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tk8.6-blt2.5 tk8.6-blt2.5 2.5.3+dfsg-7 install ok installed tm-align tm-align 20190822+dfsg-3 install ok installed trimmomatic trimmomatic 0.39+dfsg-2 install ok installed tzdata tzdata 2024b-4 install ok installed ucf ucf 3.0045 install ok installed unicode-data unicode-data 15.1.0-1 install ok installed unixodbc-common unixodbc-common 2.3.12-1 install ok installed unzip unzip 6.0-28 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-12 install ok installed wise wise 2.4.1-25 install ok installed wise-data wise-data 2.4.1-25 install ok installed x11-common x11-common 1:7.7+23.1 install ok installed x11-utils x11-utils 7.7+7 install ok installed x11-xserver-utils x11-xserver-utils 7.7+10+b1 install ok installed xauth xauth 1:1.1.2-1 install ok installed xdg-user-dirs xdg-user-dirs 0.18-1 install ok installed xdg-utils xdg-utils 1.2.1-2 install ok installed xfonts-encodings xfonts-encodings 1:1.0.4-2.2 install ok installed xfonts-utils xfonts-utils 1:7.7+7 install ok installed xkb-data xkb-data 2.42-1 install ok installed xz-utils xz-utils 5.6.3-1+b1 install ok installed zip zip 3.0-14 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1+b1 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.3.dfsg+really1.3.1-1+b1 install ok installed zutty zutty 0.16.2.20241020+dfsg1-1 3m0.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 3m0.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', 'remove', 'adduser', 'adwaita-icon-theme', 'alsa-topology-conf', 'alsa-ucm-conf', 'amap-align', 'apache2-bin', 'at-spi2-common', 'at-spi2-core', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bioperl', 'bioperl-run', 'blends-common', 'blt', 'build-essential', 'bwa', 'bzip2', 'bzip2-doc', 'ca-certificates', 'ca-certificates-java', 'clustalo', 'clustalw', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jdk-headless', 'default-jre', 'default-jre-headless', 'dialign-tx', 'dialign-tx-data', 'dirmngr', 'dmsetup', 'dpkg-dev', 'exonerate', 'fakeroot', 'fastaq', 'file', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-droid-fallback', 'fonts-lato', 'fonts-liberation', 'fonts-liberation-sans-narrow', 'fonts-lyx', 'fonts-noto-mono', 'fonts-urw-base35', 'fsa', 'g++-', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gawk', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'gdal-data', 'gdal-plugins:amd64', 'gfortran', 'gfortran-14', 'gfortran-14-x86-64-linux-gnu', 'gfortran-x86-64-linux-gnu', 'ghostscript', 'gnupg', 'gnupg-l10n', 'gnupg-utils', 'gpg', 'gpg-agent', 'gpg-wks-client', 'gpgconf', 'gpgsm', 'graphviz', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'icu-devtools', 'isympy-common', 'isympy3', 'java-common', 'javascript-common', 'kalign', 'kmc', 'krb5-locales', 'lagan', 'libabsl20230802:amd64', 'libace-perl', 'libaec0:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl:amd64', 'libalgorithm-merge-perl', 'libalgorithm-munkres-perl', 'libann0', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapache2-reload-perl', 'libapparmor1:amd64', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libargtable2-0', 'libarmadillo14', 'libarpack2t64:amd64', 'libarray-compare-perl', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libassuan9:amd64', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libauthen-sasl-perl', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libb-hooks-endofscope-perl', 'libb-hooks-op-check-perl:amd64', 'libbambamc0:amd64', 'libbinutils:amd64', 'libbio-asn1-entrezgene-perl', 'libbio-cluster-perl', 'libbio-eutilities-perl', 'libbio-featureio-perl', 'libbio-perl-perl', 'libbio-perl-run-perl', 'libbio-tools-run-remoteblast-perl', 'libbio-variation-perl', 'libbit-vector-perl:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libbrotli1:amd64', 'libbsd-resource-perl', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcache-cache-perl', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcapture-tiny-perl', 'libcarp-clan-perl', 'libcc1-0:amd64', 'libcdt5:amd64', 'libcfitsio10t64:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcgraph6:amd64', 'libclass-data-inheritable-perl', 'libclass-inspector-perl', 'libclass-method-modifiers-perl', 'libclass-xsaccessor-perl', 'libclone-perl:amd64', 'libcloudproviders0:amd64', 'libcolord2:amd64', 'libconvert-binary-c-perl', 'libconvert-binhex-perl', 'libcrypt-dev:amd64', 'libcrypt-rc4-perl', 'libcryptsetup12:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdata-dump-perl', 'libdata-stag-perl', 'libdate-calc-perl', 'libdate-calc-xs-perl:amd64', 'libdate-manip-perl', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbd-mysql-perl:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate-dev:amd64', 'libdeflate0:amd64', 'libdevel-callchecker-perl:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libdevmapper1.02.1:amd64', 'libdigest-perl-md5-perl', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdynaloader-functions-perl', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1t64:amd64', 'libencode-locale-perl', 'libepoxy0:amd64', 'liberror-perl', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfakeroot:amd64', 'libfcgi-bin', 'libfcgi-perl', 'libfcgi0t64:amd64', 'libfile-basedir-perl', 'libfile-desktopentry-perl', 'libfile-fcntllock-perl', 'libfile-listing-perl', 'libfile-mimeinfo-perl', 'libfile-slurp-tiny-perl', 'libfile-sort-perl', 'libfont-afm-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfreezethaw-perl', 'libfribidi0:amd64', 'libfyba0t64:amd64', 'libgav1-1:amd64', 'libgbm1:amd64', 'libgcc-14-dev:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdal35:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-bin', 'libgdk-pixbuf2.0-common', 'libgeos-c1t64:amd64', 'libgeos3.13.0:amd64', 'libgeotiff5:amd64', 'libgfortran-14-dev:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libgles2:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgomp1:amd64', 'libgpgme11t64:amd64', 'libgpgmepp6t64:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraph-perl', 'libgraphite2-3:amd64', 'libgraphviz-perl', 'libgs-common', 'libgs10:amd64', 'libgs10-common', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgts-0.7-5t64:amd64', 'libgts-bin', 'libgvc6', 'libgvpr2:amd64', 'libharfbuzz0b:amd64', 'libhdf4-0-alt:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libheap-perl', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhtml-form-perl', 'libhtml-format-perl', 'libhtml-parser-perl:amd64', 'libhtml-tableextract-perl', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libhwasan0:amd64', 'libice6:amd64', 'libicu-dev:amd64', 'libicu72:amd64', 'libidn12:amd64', 'libijs-0.35:amd64', 'libimagequant0:amd64', 'libimport-into-perl', 'libio-compress-brotli-perl', 'libio-html-perl', 'libio-pty-perl', 'libio-sessiondata-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libio-stringy-perl', 'libipc-run-perl', 'libipc-sharelite-perl', 'libipc-system-simple-perl', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjbig2dec0:amd64', 'libjbzip2-java', 'libjcode-pm-perl', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjson-c5:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1t64:amd64', 'libkmldom1t64:amd64', 'libkmlengine1t64:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libksba8:amd64', 'liblab-gamut1:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'libllvm19:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'liblzma-dev:amd64', 'libmagic-mgc', 'libmagic1t64:amd64', 'libmailtools-perl', 'libmariadb3:amd64', 'libmath-derivative-perl', 'libmath-spline-perl', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libmime-tools-perl', 'libminizip1t64:amd64', 'libmldbm-perl', 'libmodule-implementation-perl', 'libmodule-runtime-perl', 'libmoo-perl', 'libmpc3:amd64', 'libmpfr6:amd64', 'libnamespace-clean-perl', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnet-dbus-perl', 'libnet-http-perl', 'libnet-smtp-ssl-perl', 'libnet-ssleay-perl:amd64', 'libnetcdf19t64:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnpth0t64:amd64', 'libnsl2:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libodbc2:amd64', 'libodbcinst2:amd64', 'libogdi4.1:amd64', 'libole-storage-lite-perl', 'libopenjp2-7:amd64', 'libpackage-stash-perl', 'libpackage-stash-xs-perl:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libparams-classify-perl:amd64', 'libparse-recdescent-perl', 'libpathplan4:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpcre2-32-0:amd64', 'libpcre2-dev:amd64', 'libpcre2-posix3:amd64', 'libpcsclite1:amd64', 'libperl5.40:amd64', 'libpixman-1-0:amd64', 'libpkgconf3:amd64', 'libpng-dev:amd64', 'libpng-tools', 'libpng16-16t64:amd64', 'libpoppler140:amd64', 'libpostscript-perl', 'libpq5:amd64', 'libproc2-0:amd64', 'libproj25:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'librav1e0.7:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'libreadonly-perl', 'libref-util-perl', 'libref-util-xs-perl', 'librole-tiny-perl', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'librtmp1:amd64', 'librttopo1:amd64', 'libruby:amd64', 'libruby3.1t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libset-object-perl', 'libset-scalar-perl', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libsigsegv2:amd64', 'libsm6:amd64', 'libsnappy1v5:amd64', 'libsoap-lite-perl', 'libsort-naturally-perl', 'libspatialite8t64:amd64', 'libspreadsheet-parseexcel-perl', 'libspreadsheet-writeexcel-perl', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstatistics-descriptive-perl', 'libstdc++-14-dev:amd64', 'libsub-exporter-progressive-perl', 'libsub-identify-perl', 'libsub-name-perl:amd64', 'libsub-quote-perl', 'libsub-uplevel-perl', 'libsvg-graph-perl', 'libsvg-perl', 'libsvtav1enc2:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libtask-weaken-perl', 'libtcl8.6:amd64', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-requiresinternet-perl', 'libtest-warn-perl', 'libtext-csv-perl', 'libtext-csv-xs-perl:amd64', 'libtext-diff-perl', 'libtext-iconv-perl:amd64', 'libthai-data', 'libthai0:amd64', 'libtie-ixhash-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtree-dagnode-perl', 'libtry-tiny-perl', 'libtsan2:amd64', 'libtype-tiny-perl', 'libtype-tiny-xs-perl:amd64', 'libubsan1:amd64', 'libunicode-map-perl', 'liburi-perl', 'liburiparser1:amd64', 'libuv1t64:amd64', 'libvariable-magic-perl', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx11-protocol-perl', 'libx11-xcb1:amd64', 'libx265-209:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces-c3.2t64:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-dom-perl', 'libxml-dom-xpath-perl', 'libxml-filter-buffertext-perl', 'libxml-libxml-perl', 'libxml-libxslt-perl:amd64', 'libxml-namespacesupport-perl', 'libxml-parser-perl', 'libxml-perl', 'libxml-regexp-perl', 'libxml-sax-base-perl', 'libxml-sax-expat-perl', 'libxml-sax-perl', 'libxml-sax-writer-perl', 'libxml-simple-perl', 'libxml-twig-perl', 'libxml-writer-perl', 'libxml-xpath-perl', 'libxml-xpathengine-perl', 'libxml2:amd64', 'libxmlrpc-lite-perl', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxstring-perl:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyaml-libyaml-perl', 'libyaml-perl', 'libyuv0:amd64', 'libz3-4:amd64', 'linux-libc-dev', 'linux-sysctl-defaults', 'luit', 'lynx', 'lynx-common', 'mafft', 'mailcap', 'make', 'manpages', 'manpages-dev', 'maq', 'mariadb-common', 'med-config', 'media-types', 'menu', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'mummer', 'muscle', 'mustang', 'mysql-common', 'ncbi-blast+-', 'ncbi-blast+-legacy', 'ncbi-data', 'ncoils', 'netbase', 'openjdk-21-jdk-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openssl', 'pal2nal', 'paml', 'patch', 'perl', 'perl-doc', 'perl-modules-5.40', 'perl-openssl-defaults:amd64', 'perl-tk', 'phylip', 'pinentry-curses', 'pkgconf:amd64', 'pkgconf-bin', 'poa', 'poppler-data', 'prank', 'primer3', 'probalign', 'probcons', 'procps', 'proda', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python-matplotlib-data', 'python3', 'python3-appdirs', 'python3-attr', 'python3-autocommand', 'python3-brotli', 'python3-bs4', 'python3-chardet', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-fonttools', 'python3-fs', 'python3-gdal', 'python3-html5lib', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-matplotlib', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-networkx', 'python3-numpy', 'python3-olefile', 'python3-packaging', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-pydot', 'python3-pygraphviz', 'python3-pyparsing', 'python3-pysam', 'python3-scipy', 'python3-soupsieve', 'python3-sympy', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-unicodedata2', 'python3-webencodings', 'python3-yaml', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'r-base-core', 'r-base-dev', 'r-cran-boot', 'r-cran-class', 'r-cran-cluster', 'r-cran-codetools', 'r-cran-foreign', 'r-cran-kernsmooth', 'r-cran-lattice', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-nlme', 'r-cran-nnet', 'r-cran-rpart', 'r-cran-spatial', 'r-cran-survival', 'r-doc-html', 'r-recommended', 'rake', 'raxml', 'readline-common', 'rpcsvc-proto', 'ruby', 'ruby-net-telnet', 'ruby-rubygems', 'ruby-sdbm:amd64', 'ruby-webrick', 'ruby-xmlrpc', 'ruby3.1', 'rubygems-integration', 'samtools', 'sensible-utils', 'shared-mime-info', 'sim4', 'smalt', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 't-coffee', 'tk8.6-blt2.5', 'tm-align', 'trimmomatic', 'ucf', 'unicode-data', 'unixodbc-common', 'unzip', 'wise', 'wise-data', 'x11-common', 'x11-utils', 'x11-xserver-utils', 'xauth', 'xdg-user-dirs', 'xdg-utils', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'zutty', 'iva'] 3m17.4s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: adduser adwaita-icon-theme alsa-topology-conf alsa-ucm-conf amap-align apache2-bin at-spi2-common at-spi2-core binutils binutils-common binutils-x86-64-linux-gnu bioperl bioperl-run blends-common blt build-essential bwa bzip2 bzip2-doc ca-certificates ca-certificates-java clustalo clustalw cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jdk-headless default-jre default-jre-headless dialign-tx dialign-tx-data dirmngr dmsetup dpkg-dev exonerate fakeroot fastaq file fontconfig fontconfig-config fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-droid-fallback fonts-lato fonts-liberation fonts-liberation-sans-narrow fonts-lyx fonts-noto-mono fonts-urw-base35 fsa g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gawk gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu ghostscript gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpgconf gpgsm graphviz gsettings-desktop-schemas gtk-update-icon-cache hicolor-icon-theme icu-devtools isympy-common isympy3 iva java-common javascript-common kalign kmc krb5-locales lagan libabsl20230802 libace-perl libaec0 libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libalgorithm-munkres-perl libann0 libaom3 libapache-dbi-perl libapache2-mod-perl2 libapache2-reload-perl libapparmor1 libapr1t64 libaprutil1-dbd-sqlite3 libaprutil1-ldap libaprutil1t64 libargtable2-0 libarmadillo14 libarpack2t64 libarray-compare-perl libasan8 libasound2-data libasound2t64 libassuan9 libatk-bridge2.0-0t64 libatk-wrapper-java libatk-wrapper-java-jni libatk1.0-0t64 libatomic1 libatspi2.0-0t64 libauthen-sasl-perl libavahi-client3 libavahi-common-data libavahi-common3 libavif16 libb-hooks-endofscope-perl libb-hooks-op-check-perl libbambamc0 libbinutils libbio-asn1-entrezgene-perl libbio-cluster-perl libbio-eutilities-perl libbio-featureio-perl libbio-perl-perl libbio-perl-run-perl libbio-tools-run-remoteblast-perl libbio-variation-perl libbit-vector-perl libblas-dev libblas3 libblosc1 libbrotli1 libbsd-resource-perl libbz2-dev libc-dev-bin libc6-dev libcache-cache-perl libcairo-gobject2 libcairo2 libcapture-tiny-perl libcarp-clan-perl libcc1-0 libcdt5 libcfitsio10t64 libcgi-fast-perl libcgi-pm-perl libcgraph6 libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcloudproviders0 libcolord2 libconvert-binary-c-perl libconvert-binhex-perl libcrypt-dev libcrypt-rc4-perl libcryptsetup12 libctf-nobfd0 libctf0 libcups2t64 libcurl3t64-gnutls libcurl4t64 libdata-dump-perl libdata-stag-perl libdate-calc-perl libdate-calc-xs-perl libdate-manip-perl libdatrie1 libdav1d7 libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdbus-1-3 libdconf1 libde265-0 libdeflate-dev libdeflate0 libdevel-callchecker-perl libdevel-stacktrace-perl libdevel-symdump-perl libdevmapper1.02.1 libdigest-perl-md5-perl libdpkg-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libdynaloader-functions-perl libedit2 libegl-mesa0 libegl1 libelf1t64 libencode-locale-perl libepoxy0 liberror-perl libexception-class-perl libexpat1 libexporter-tiny-perl libfakeroot libfcgi-bin libfcgi-perl libfcgi0t64 libfile-basedir-perl libfile-desktopentry-perl libfile-fcntllock-perl libfile-listing-perl libfile-mimeinfo-perl libfile-slurp-tiny-perl libfile-sort-perl libfont-afm-perl libfontconfig1 libfontenc1 libfreetype6 libfreexl1 libfreezethaw-perl libfribidi0 libfyba0t64 libgav1-1 libgbm1 libgcc-14-dev libgd-perl libgd3 libgdal35 libgdbm-compat4t64 libgdbm6t64 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgfortran-14-dev libgfortran5 libgif7 libgl1 libgl1-mesa-dri libglapi-mesa libgles2 libglib2.0-0t64 libglib2.0-data libglvnd0 libglx-mesa0 libglx0 libgomp1 libgpgme11t64 libgpgmepp6t64 libgpm2 libgprofng0 libgraph-perl libgraphite2-3 libgraphviz-perl libgs-common libgs10 libgs10-common libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-bin libgtk-3-common libgts-0.7-5t64 libgts-bin libgvc6 libgvpr2 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 libhdf5-hl-100t64 libheap-perl libheif-plugin-aomenc libheif-plugin-dav1d libheif-plugin-libde265 libheif-plugin-x265 libheif1 libhtml-form-perl libhtml-format-perl libhtml-parser-perl libhtml-tableextract-perl libhtml-tagset-perl libhtml-tree-perl libhts3t64 libhtscodecs2 libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhwasan0 libice6 libicu-dev libicu72 libidn12 libijs-0.35 libimagequant0 libimport-into-perl libio-compress-brotli-perl libio-html-perl libio-pty-perl libio-sessiondata-perl libio-socket-ssl-perl libio-string-perl libio-stringy-perl libipc-run-perl libipc-sharelite-perl libipc-system-simple-perl libisl23 libitm1 libjansson4 libjbig0 libjbig2dec0 libjbzip2-java libjcode-pm-perl libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-jquery libjs-jquery-ui libjson-c5 libk5crypto3 libkeyutils1 libkmlbase1t64 libkmldom1t64 libkmlengine1t64 libkmod2 libkrb5-3 libkrb5support0 libksba8 liblab-gamut1 liblapack-dev liblapack3 liblbfgsb0 liblcms2-2 libldap-2.5-0 libldap-common liblerc4 liblist-moreutils-perl liblist-moreutils-xs-perl libllvm19 liblmdb0 liblocale-gettext-perl liblsan0 libltdl7 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzma-dev libmagic-mgc libmagic1t64 libmailtools-perl libmariadb3 libmath-derivative-perl libmath-spline-perl libmbedcrypto16 libmbedtls21 libmbedx509-7 libmime-tools-perl libminizip1t64 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmpc3 libmpfr6 libnamespace-clean-perl libncurses-dev libncurses6 libncursesw6 libnet-dbus-perl libnet-http-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnetcdf19t64 libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnsl2 libnspr4 libnss-systemd libnss3 libnuma1 libodbc2 libodbcinst2 libogdi4.1 libole-storage-lite-perl libopenjp2-7 libpackage-stash-perl libpackage-stash-xs-perl libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl libparse-recdescent-perl libpathplan4 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpcsclite1 libperl5.40 libpixman-1-0 libpkgconf3 libpng-dev libpng-tools libpng16-16t64 libpoppler140 libpostscript-perl libpq5 libproc2-0 libproj25 libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libqhull-r8.0 libquadmath0 libraqm0 librav1e0.7 libreadline-dev libreadline8t64 libreadonly-perl libref-util-perl libref-util-xs-perl librole-tiny-perl librsvg2-2 librsvg2-common librtmp1 librttopo1 libruby libruby3.1t64 libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libset-object-perl libset-scalar-perl libsframe1 libsharpyuv0 libsigsegv2 libsm6 libsnappy1v5 libsoap-lite-perl libsort-naturally-perl libspatialite8t64 libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsqlite3-0 libssh2-1t64 libstatistics-descriptive-perl libstdc++-14-dev libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libsub-uplevel-perl libsvg-graph-perl libsvg-perl libsvtav1enc2 libsystemd-shared libsz2 libtask-weaken-perl libtcl8.6 libtest-deep-perl libtest-differences-perl libtest-exception-perl libtest-most-perl libtest-requiresinternet-perl libtest-warn-perl libtext-csv-perl libtext-csv-xs-perl libtext-diff-perl libtext-iconv-perl libthai-data libthai0 libtie-ixhash-perl libtiff6 libtimedate-perl libtirpc-common libtirpc-dev libtirpc3t64 libtk8.6 libtree-dagnode-perl libtry-tiny-perl libtsan2 libtype-tiny-perl libtype-tiny-xs-perl libubsan1 libunicode-map-perl liburi-perl liburiparser1 libuv1t64 libvariable-magic-perl libvulkan1 libwayland-client0 libwayland-cursor0 libwayland-egl1 libwayland-server0 libwebp7 libwebpdemux2 libwebpmux3 libwww-perl libwww-robotrules-perl libx11-6 libx11-data libx11-protocol-perl libx11-xcb1 libx265-209 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-randr0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-sync1 libxcb-xfixes0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxerces-c3.2t64 libxext6 libxfixes3 libxft2 libxi6 libxinerama1 libxkbcommon0 libxkbfile1 libxml-dom-perl libxml-dom-xpath-perl libxml-filter-buffertext-perl libxml-libxml-perl libxml-libxslt-perl libxml-namespacesupport-perl libxml-parser-perl libxml-perl libxml-regexp-perl libxml-sax-base-perl libxml-sax-expat-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libxml-xpath-perl libxml-xpathengine-perl libxml2 libxmlrpc-lite-perl libxmu6 libxmuu1 libxpm4 libxrandr2 libxrender1 libxshmfence1 libxslt1.1 libxss1 libxstring-perl libxt6t64 libxtst6 libxv1 libxxf86dga1 libxxf86vm1 libyaml-0-2 libyaml-libyaml-perl libyaml-perl libyuv0 libz3-4 linux-libc-dev linux-sysctl-defaults luit lynx lynx-common mafft mailcap make manpages manpages-dev maq mariadb-common med-config media-types menu mesa-libgallium mesa-vulkan-drivers mummer muscle mustang mysql-common ncbi-blast+ ncbi-blast+-legacy ncbi-data ncoils netbase openjdk-21-jdk-headless openjdk-21-jre openjdk-21-jre-headless openssl pal2nal paml patch perl perl-doc perl-modules-5.40 perl-openssl-defaults perl-tk phylip pinentry-curses pkgconf pkgconf-bin poa poppler-data prank primer3 probalign probcons procps proda proj-bin proj-data psmisc publicsuffix python-matplotlib-data python3 python3-appdirs python3-attr python3-autocommand python3-brotli python3-bs4 python3-chardet python3-contourpy python3-cssselect python3-cycler python3-dateutil python3-decorator python3-fonttools python3-fs python3-gdal python3-html5lib python3-inflect python3-jaraco.context python3-jaraco.functools python3-kiwisolver python3-lxml python3-lz4 python3-matplotlib python3-minimal python3-more-itertools python3-mpmath python3-networkx python3-numpy python3-olefile python3-packaging python3-pil python3-pil.imagetk python3-pkg-resources python3-pydot python3-pygraphviz python3-pyparsing python3-pysam python3-scipy python3-soupsieve python3-sympy python3-tk python3-typeguard python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2 python3-webencodings python3-yaml python3.12 python3.12-minimal python3.12-tk python3.13-tk r-base-core r-base-dev r-cran-boot r-cran-class r-cran-cluster r-cran-codetools r-cran-foreign r-cran-kernsmooth r-cran-lattice r-cran-mass r-cran-matrix r-cran-mgcv r-cran-nlme r-cran-nnet r-cran-rpart r-cran-spatial r-cran-survival r-doc-html r-recommended rake raxml readline-common rpcsvc-proto ruby ruby-net-telnet ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration samtools sensible-utils shared-mime-info sim4 smalt systemd systemd-cryptsetup systemd-sysv systemd-timesyncd t-coffee tk8.6-blt2.5 tm-align trimmomatic ucf unicode-data unixodbc-common unzip wise wise-data x11-common x11-utils x11-xserver-utils xauth xdg-user-dirs xdg-utils xfonts-encodings xfonts-utils xkb-data xz-utils zip zlib1g-dev zutty 0 upgraded, 0 newly installed, 768 to remove and 0 not upgraded. After this operation, 2416 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 56850 files and directories currently installed.) Removing python3-gdal (3.9.3+dfsg-1+b1) ... Removing libgdal35:amd64 (3.9.3+dfsg-1+b1) ... Removing libpoppler140:amd64 (24.08.0-3) ... Removing libgpgmepp6t64:amd64 (1.24.0-2) ... Removing libgpgme11t64:amd64 (1.24.0-2) ... Removing gnupg (2.2.45-2) ... Removing gpg-wks-client (2.2.45-2) ... Removing dirmngr (2.2.45-2) ... Removing med-config (3.8.1) ... Removing trimmomatic (0.39+dfsg-2) ... Removing default-jre (2:1.21-76) ... Removing openjdk-21-jre:amd64 (21.0.5+11-1) ... Removing libgtk-3-bin (3.24.43-4) ... Removing libgtk-3-0t64:amd64 (3.24.43-4) ... Removing adwaita-icon-theme (47.0-2) ... Removing alsa-topology-conf (1.2.5.1-3) ... Removing alsa-ucm-conf (1.2.12-1) ... Removing amap-align (2.2+git20080214.600fc29+dfsg-2) ... Removing libapache2-reload-perl (0.14-1) ... Removing libapache-dbi-perl (1.12-3) ... Removing libapache2-mod-perl2 (2.0.13-2+b1) ... Removing apache2-bin (2.4.62-3) ... Removing at-spi2-core (2.54.0-1) ... Removing libatk-wrapper-java-jni:amd64 (0.40.0-3+b3) ... Removing r-base-dev (4.4.2-1) ... Removing build-essential (12.12) ... Removing g++ (4:14.2.0-1) ... Removing gfortran (4:14.2.0-1) ... Removing gcc (4:14.2.0-1) ... Removing dpkg-dev (1.22.11) ... Removing g++-x86-64-linux-gnu (4:14.2.0-1) ... Removing gfortran-x86-64-linux-gnu (4:14.2.0-1) ... Removing gcc-x86-64-linux-gnu (4:14.2.0-1) ... Removing g++-14 (14.2.0-8) ... Removing g++-14-x86-64-linux-gnu (14.2.0-8) ... Removing bioperl-run (1.7.3-13) ... Removing bioperl (1.7.8-1) ... Removing blends-common (0.7.7) ... Removing python3-matplotlib (3.8.3-3+b1) ... Removing python3-pil.imagetk:amd64 (10.4.0-1+b1) ... Removing python3-pil:amd64 (10.4.0-1+b1) ... Removing python3-tk:amd64 (3.12.7-1) ... Removing blt (2.5.3+dfsg-7) ... Removing bwa (0.7.18-1) ... Removing bzip2 (1.0.8-6) ... Removing bzip2-doc (1.0.8-6) ... Removing r-recommended (4.4.2-1) ... Removing r-cran-rpart (4.1.23-1) ... Removing r-cran-survival (3.7-0-1) ... Removing r-cran-spatial (7.3-17-1) ... Removing default-jdk-headless (2:1.21-76) ... Removing openjdk-21-jdk-headless:amd64 (21.0.5+11-1) ... Removing iva (1.0.11+ds-6) ... Removing default-jre-headless (2:1.21-76) ... Removing openjdk-21-jre-headless:amd64 (21.0.5+11-1) ... Removing ca-certificates-java (20240118) ... Removing clustalo (1.2.4-8) ... Removing clustalw (2.1+lgpl-7) ... Removing x11-xserver-utils (7.7+10+b1) ... Removing cpp (4:14.2.0-1) ... Removing cpp-x86-64-linux-gnu (4:14.2.0-1) ... Removing libgtk-3-common (3.24.43-4) ... Removing gsettings-desktop-schemas (47.1-1) ... Removing dconf-gsettings-backend:amd64 (0.40.0-4+b3) ... Removing dconf-service (0.40.0-4+b3) ... Removing dbus-user-session (1.14.10-6) ... Removing libpam-systemd:amd64 (257~rc3-1) ... Removing dbus (1.14.10-6) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of stop. Removing dbus-daemon (1.14.10-6) ... Removing dbus-bin (1.14.10-6) ... Removing dbus-session-bus-common (1.14.10-6) ... Removing dbus-system-bus-common (1.14.10-6) ... Removing dialign-tx (1.0.2-15) ... Removing dialign-tx-data (1.0.2-15) ... Removing systemd-cryptsetup (257~rc3-1) ... Removing libcryptsetup12:amd64 (2:2.7.5-1) ... Removing fsa (1.15.9+dfsg-6) ... Removing exonerate (2.4.0-5+b1) ... Removing fakeroot (1.36-1) ... update-alternatives: using /usr/bin/fakeroot-tcp to provide /usr/bin/fakeroot (fakeroot) in auto mode Removing fastaq (3.17.0-9) ... Removing file (1:5.45-3+b1) ... Removing librsvg2-common:amd64 (2.59.1+dfsg-1) ... Removing librsvg2-2:amd64 (2.59.1+dfsg-1) ... Removing libatk-wrapper-java (0.40.0-3) ... Removing x11-utils (7.7+7) ... Removing tk8.6-blt2.5 (2.5.3+dfsg-7) ... Removing perl-tk (1:804.036+dfsg1-3+b1) ... Removing python-matplotlib-data (3.8.3-3) ... Removing fonts-dejavu-extra (2.37-8) ... Removing fonts-dejavu-core (2.37-8) ... Removing fonts-dejavu-mono (2.37-8) ... Removing fonts-droid-fallback (1:8.1.0r7-1~1.gbp36536b) ... Removing fonts-lato (2.015-1) ... Removing fonts-liberation (1:2.1.5-3) ... Removing fonts-liberation-sans-narrow (1:1.07.6-4) ... Removing fonts-lyx (2.4.2.1-1) ... Removing fonts-noto-mono (20201225-2) ... Removing ghostscript (10.04.0~dfsg-2) ... Removing libgs10:amd64 (10.04.0~dfsg-2) ... Removing libgs10-common (10.04.0~dfsg-2) ... Removing mummer (3.23+dfsg-8) ... Removing gawk (1:5.2.1-2+b1) ... update-alternatives: using /usr/bin/mawk to provide /usr/bin/awk (awk) in auto mode Removing gdal-data (3.9.3+dfsg-1) ... Removing gdal-plugins:amd64 (3.9.3+dfsg-1+b1) ... Removing gfortran-14 (14.2.0-8) ... Removing gfortran-14-x86-64-linux-gnu (14.2.0-8) ... Removing gnupg-l10n (2.2.45-2) ... Removing gnupg-utils (2.2.45-2) ... Removing gpg (2.2.45-2) ... Removing gpg-agent (2.2.45-2) ... Removing gpgsm (2.2.45-2) ... Removing gpgconf (2.2.45-2) ... Removing python3-pygraphviz (1.14-1+b1) ... Removing python3-pydot (2.0.0-3) ... Removing gtk-update-icon-cache (4.16.7+ds-1) ... Removing hicolor-icon-theme (0.18-1) ... Removing libicu-dev:amd64 (72.1-5+b1) ... Removing icu-devtools (72.1-5+b1) ... Removing isympy3 (1.13.3-1) ... Removing isympy-common (1.13.3-1) ... Removing java-common (0.76) ... Removing javascript-common (11+nmu1) ... Removing kalign (1:3.4.0-1+b1) ... Removing kmc (3.2.4+dfsg-1+b1) ... Removing krb5-locales (1.21.3-3) ... Removing lagan (2.0-10) ... Removing libgd-perl (2.78-1+b3) ... Removing libace-perl (1.92-12+b1) ... Removing libhdf4-0-alt:amd64 (4.3.0-1+b1) ... Removing libnetcdf19t64:amd64 (1:4.9.2-7) ... Removing libtest-most-perl (0.38-1) ... Removing libtest-differences-perl (0.71-1) ... Removing libtext-diff-perl (1.45-2) ... Removing libalgorithm-merge-perl (0.08-5) ... Removing libalgorithm-diff-xs-perl:amd64 (0.04-8+b4) ... Removing libalgorithm-munkres-perl (0.08-5) ... Removing libheif-plugin-aomenc:amd64 (1.19.3-1) ... Removing systemd-timesyncd (257~rc3-1) ... Removing systemd-sysv (257~rc3-1) ... Removing libaprutil1-ldap:amd64 (1.6.3-3) ... Removing libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Removing libaprutil1t64:amd64 (1.6.3-3) ... Removing libapr1t64:amd64 (1.7.5-1) ... Removing libargtable2-0 (13-3) ... Removing libarmadillo14 (1:14.2.1+dfsg-1+b1) ... Removing libarpack2t64:amd64 (3.9.1-1.2+b1) ... Removing libarray-compare-perl (3.0.8-1) ... Removing libstdc++-14-dev:amd64 (14.2.0-8) ... Removing libgfortran-14-dev:amd64 (14.2.0-8) ... Removing libasound2t64:amd64 (1.2.12-1+b1) ... Removing libasound2-data (1.2.12-1) ... Removing pinentry-curses (1.2.1-4+b1) ... Removing libassuan9:amd64 (3.0.1-2) ... Removing libatk-bridge2.0-0t64:amd64 (2.54.0-1) ... Removing wise (2.4.1-25) ... Removing libfile-mimeinfo-perl (0.35-1) ... Removing libatspi2.0-0t64:amd64 (2.54.0-1) ... Removing libauthen-sasl-perl (2.1700-1) ... Removing libcups2t64:amd64 (2.4.10-2) ... Removing libavahi-client3:amd64 (0.8-15) ... Removing libavahi-common3:amd64 (0.8-15) ... Removing libavahi-common-data:amd64 (0.8-15) ... Removing libnamespace-clean-perl (0.27-2) ... Removing libb-hooks-endofscope-perl (0.28-1) ... Removing libpackage-stash-perl (0.40-1) ... Removing libmodule-implementation-perl (0.09-2) ... Removing libmoo-perl (2.005005-1) ... Removing libimport-into-perl (1.002005-2) ... Removing libmodule-runtime-perl (0.016-2) ... Removing libparams-classify-perl:amd64 (0.015-2+b4) ... Removing libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Removing libb-hooks-op-check-perl:amd64 (0.22-3+b2) ... Removing smalt (0.7.6-13) ... Removing libbambamc0:amd64 (0.0.50-6+b2) ... Removing libbio-eutilities-perl (1.77-2) ... Removing libbio-asn1-entrezgene-perl (1.730-3) ... Removing libbio-cluster-perl (1.7.3-6) ... Removing libbio-featureio-perl (1.6.905-2) ... Removing libbio-variation-perl (1.7.5-3) ... Removing libbio-tools-run-remoteblast-perl (1.7.3-3) ... Removing libbio-perl-run-perl (1.7.3-13) ... Removing libdate-calc-xs-perl:amd64 (6.4-2+b4) ... Removing libdate-calc-perl (6.4-2) ... Removing libbit-vector-perl:amd64 (7.4-3+b2) ... Removing liblapack-dev:amd64 (3.12.0-4) ... Removing libblas-dev:amd64 (3.12.0-4) ... Removing python3-contourpy (1.3.1-1) ... Removing r-cran-mgcv (1.9-1-1) ... Removing libblosc1:amd64 (1.21.5+ds-1+b2) ... Removing lynx (2.9.2-1) ... Removing libio-compress-brotli-perl (0.004001-2+b3) ... Removing libbsd-resource-perl (1.2911-2+b4) ... Removing libbz2-dev:amd64 (1.0.8-6) ... Removing libpng-dev:amd64 (1.6.44-2) ... Removing zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Removing libpcre2-dev:amd64 (10.44-4) ... Removing libreadline-dev:amd64 (8.2-5) ... Removing libncurses-dev:amd64 (6.5-2+b1) ... Removing libjpeg-dev:amd64 (1:2.1.5-3+b1) ... Removing libjpeg62-turbo-dev:amd64 (1:2.1.5-3+b1) ... Removing libc6-dev:amd64 (2.40-4) ... Removing libc-dev-bin (2.40-4) ... Removing libcache-cache-perl (1.08-3) ... Removing libcairo-gobject2:amd64 (1.18.2-2) ... Removing libcapture-tiny-perl (0.48-2) ... Removing libcarp-clan-perl (6.08-2) ... Removing libcfitsio10t64:amd64 (4.5.0-5) ... Removing libcgi-fast-perl (1:2.17-1) ... Removing libcgi-pm-perl (4.66-1) ... Removing libexception-class-perl (1.45-1) ... Removing libclass-data-inheritable-perl (0.10-1) ... Removing libxmlrpc-lite-perl (0.717-5) ... Removing libsoap-lite-perl (1.27-3) ... Removing libclass-inspector-perl (1.36-3) ... Removing librole-tiny-perl (2.002004-1) ... Removing libclass-method-modifiers-perl (2.15-1) ... Removing libclass-xsaccessor-perl (1.19-4+b4) ... Removing libgraphviz-perl (2.24-1) ... Removing libxml-xpath-perl (1.48-1) ... Removing libnet-dbus-perl (1.2.0-2+b3) ... Removing libxml-twig-perl (1:3.52-3) ... Removing libxml-dom-xpath-perl (0.14-4) ... Removing libxml-dom-perl (1.46-2) ... Removing libcloudproviders0:amd64 (0.3.6-1+b1) ... Removing libcolord2:amd64 (1.4.7-1+b2) ... Removing libconvert-binary-c-perl (0.85-1+b1) ... Removing libmime-tools-perl (5.515-1) ... Removing libconvert-binhex-perl (1.125-3) ... Removing libcrypt-dev:amd64 (1:4.4.36-5) ... Removing libspreadsheet-parseexcel-perl (0.6600-1) ... Removing libcrypt-rc4-perl (2.02-5) ... Removing libxerces-c3.2t64:amd64 (3.2.4+debian-1.3+b1) ... Removing proj-bin (9.5.1-1) ... Removing libdata-dump-perl (1.25-1) ... Removing libdate-manip-perl (6.96-1) ... Removing libheif-plugin-x265:amd64 (1.19.3-1) ... Removing libdbd-mysql-perl:amd64 (4.052-1+b3) ... Removing libdbd-pg-perl (3.18.0-1+b3) ... Removing libdbd-sqlite3-perl:amd64 (1.76-1) ... Removing libdbi-perl:amd64 (1.645-1+b1) ... Removing libdbus-1-3:amd64 (1.14.10-6) ... Removing libdconf1:amd64 (0.40.0-4+b3) ... Removing libdeflate-dev:amd64 (1.22-1) ... Removing libgeotiff5:amd64 (1.7.3-1+b1) ... Removing samtools (1.20-3) ... Removing libdevel-stacktrace-perl (2.0500-1) ... Removing libdevel-symdump-perl (2.18-5) ... Removing libdigest-perl-md5-perl (1.9-5) ... Removing libdpkg-perl (1.22.11) ... Removing mesa-vulkan-drivers:amd64 (24.2.8-1) ... Removing zutty (0.16.2.20241020+dfsg1-1) ... Removing libegl1:amd64 (1.7.0-1+b2) ... Removing libegl-mesa0:amd64 (24.2.8-1) ... Removing libgl1:amd64 (1.7.0-1+b2) ... Removing libglx0:amd64 (1.7.0-1+b2) ... Removing libglx-mesa0:amd64 (24.2.8-1) ... Removing libdynaloader-functions-perl (0.004-1) ... Removing libepoxy0:amd64 (1.5.10-2) ... Removing liberror-perl (0.17029-2) ... Removing python3-yaml (6.0.2-1+b1) ... Removing python3-networkx (3.2.1-5) ... Removing python3-bs4 (4.12.3-3) ... Removing python3-soupsieve (2.6-1) ... Removing libogdi4.1:amd64 (4.1.1+ds-5) ... Removing libtype-tiny-perl (2.004000-1) ... Removing libsvg-graph-perl (0.02-4) ... Removing libstatistics-descriptive-perl (3.0801-1) ... Removing liblist-moreutils-perl (0.430-2) ... Removing libexporter-tiny-perl (1.006002-1) ... Removing libfakeroot:amd64 (1.36-1) ... Removing libfcgi-bin (2.4.2-2.1+b1) ... Removing libfcgi-perl (0.82+ds-3+b2) ... Removing libfcgi0t64:amd64 (2.4.2-2.1+b1) ... Removing libfile-desktopentry-perl (0.22-3) ... Removing libfile-basedir-perl (0.09-2) ... Removing libfile-fcntllock-perl (0.22-4+b4) ... Removing libtree-dagnode-perl (1.32-1) ... Removing libfile-slurp-tiny-perl (0.004-2) ... Removing libfile-sort-perl (1.01-3) ... Removing libhtml-format-perl (2.16-2) ... Removing libfont-afm-perl (1.20-4) ... Removing libspatialite8t64:amd64 (5.1.0-3+b2) ... Removing libfreexl1:amd64 (2.0.0-1+b3) ... Removing libfreezethaw-perl (0.5001-3) ... Removing libfyba0t64:amd64 (4.1.1-11+b1) ... Removing libgl1-mesa-dri:amd64 (24.2.8-1) ... Removing libgbm1:amd64 (24.2.8-1) ... Removing libxml-simple-perl (2.25-2) ... Removing libxml-sax-writer-perl (0.57-3) ... Removing libhttp-daemon-perl (6.16-1) ... Removing libtest-deep-perl (1.204-1) ... Removing libmailtools-perl (2.22-1) ... Removing libtext-csv-xs-perl:amd64 (1.57-1) ... Removing perl-doc (5.40.0-8) ... Removing 'diversion of /usr/bin/perldoc to /usr/bin/perldoc.stub by perl-doc' Removing ncbi-blast+-legacy (2.16.0+ds-6) ... Removing ncbi-blast+ (2.16.0+ds-6+b1) ... Removing libgdk-pixbuf2.0-bin (2.42.12+dfsg-1+b1) ... Removing libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1+b1) ... Removing libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... Removing librttopo1:amd64 (1.1.0-3+b2) ... Removing libgeos-c1t64:amd64 (3.13.0-1) ... Removing libgeos3.13.0:amd64 (3.13.0-1) ... Removing tm-align (20190822+dfsg-3) ... Removing libgif7:amd64 (5.2.2-1+b1) ... Removing libgles2:amd64 (1.7.0-1+b2) ... Removing libglib2.0-data (2.82.2-3) ... Removing libglvnd0:amd64 (1.7.0-1+b2) ... Removing muscle (1:5.1.0-1) ... Removing libgpm2:amd64 (1.20.7-11+b1) ... Removing libgraph-perl (1:0.9729-1) ... Removing libgs-common (10.04.0~dfsg-2) ... Removing libpq5:amd64 (17.2-1) ... Removing libtirpc-dev:amd64 (1.3.4+ds-1.3+b1) ... Removing libgts-bin (0.7.6+darcs121130-5.2+b1) ... Removing libhdf5-hl-100t64:amd64 (1.10.10+repack-5+b1) ... Removing libheap-perl (0.80-5) ... Removing libhtml-form-perl (6.12-1) ... Removing libhtml-tableextract-perl (2.15-2) ... Removing libidn12:amd64 (1.42-2+b1) ... Removing libijs-0.35:amd64 (0.35-15.1+b2) ... Removing libipc-run-perl (20231003.0-2) ... Removing libio-pty-perl (1:1.20-1+b2) ... Removing libio-sessiondata-perl (1.03-3) ... Removing libnet-smtp-ssl-perl (1.04-2) ... Removing libole-storage-lite-perl (0.22-1) ... Removing libio-stringy-perl (2.113-2) ... Removing libipc-sharelite-perl (0.17-5+b3) ... Removing libipc-system-simple-perl (1.30-2) ... Removing libjbig2dec0:amd64 (0.20-1+b3) ... Removing libjbzip2-java (0.9.1-8) ... Removing libjcode-pm-perl (2.06-1.1) ... Removing libjs-jquery-ui (1.13.2+dfsg-1) ... Removing libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Removing libjson-c5:amd64 (0.18+ds-1) ... Removing libkmlengine1t64:amd64 (1.3.0-12+b1) ... Removing libkmldom1t64:amd64 (1.3.0-12+b1) ... Removing libkmlbase1t64:amd64 (1.3.0-12+b1) ... Removing libkmod2:amd64 (33+20240816-2) ... Removing libksba8:amd64 (1.6.7-2+b1) ... Removing liblcms2-2:amd64 (2.16-2) ... Removing libldap-common (2.5.18+dfsg-3) ... Removing liblist-moreutils-xs-perl (0.430-4+b2) ... Removing liblmdb0:amd64 (0.9.31-1+b2) ... Removing liblocale-gettext-perl (1.07-7+b1) ... Removing libodbcinst2:amd64 (2.3.12-1+b3) ... Removing libodbc2:amd64 (2.3.12-1+b3) ... Removing liblua5.4-0:amd64 (5.4.7-1+b1) ... Removing liblzma-dev:amd64 (5.6.3-1+b1) ... Removing libmagic1t64:amd64 (1:5.45-3+b1) ... Removing libmagic-mgc (1:5.45-3+b1) ... Removing libmariadb3:amd64 (1:11.4.3-1) ... Removing libmath-spline-perl (0.02-4) ... Removing libmath-derivative-perl (1.01-3) ... Removing libmbedtls21:amd64 (3.6.2-3) ... Removing libmbedx509-7:amd64 (3.6.2-3) ... Removing libmbedcrypto16:amd64 (3.6.2-3) ... Removing libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Removing libmldbm-perl (2.05-4) ... Removing libnpth0t64:amd64 (1.6-3.1+b1) ... Removing libnss3:amd64 (2:3.106-1) ... Removing libnspr4:amd64 (2:4.36-1) ... Removing libnss-systemd:amd64 (257~rc3-1) ... Removing libx265-209:amd64 (3.6-3+b1) ... Removing libnuma1:amd64 (2.0.18-1+b1) ... Removing libopenjp2-7:amd64 (2.5.0-2+b4) ... Removing libpackage-stash-xs-perl:amd64 (0.30-1+b4) ... Removing libspreadsheet-writeexcel-perl (2.40-4) ... Removing libparse-recdescent-perl (1.967015+dfsg-4) ... Removing libpcre2-16-0:amd64 (10.44-4) ... Removing libpcre2-32-0:amd64 (10.44-4) ... Removing libpcre2-posix3:amd64 (10.44-4) ... Removing libpcsclite1:amd64 (2.3.0-3) ... Removing pkgconf:amd64 (1.8.1-4) ... Removing pkgconf-bin (1.8.1-4) ... Removing libpkgconf3:amd64 (1.8.1-4) ... Removing libpng-tools (1.6.44-2) ... Removing libpostscript-perl (0.06-3.1) ... Removing libqhull-r8.0:amd64 (2020.2-6+b2) ... Removing libreadonly-perl (2.050-3) ... Removing libref-util-perl (0.204-2) ... Removing libref-util-xs-perl (0.117-2+b4) ... Removing libsasl2-modules:amd64 (2.1.28+dfsg1-8) ... Removing libset-object-perl (1.42-1+b5) ... Removing libset-scalar-perl (1.29-3) ... Removing libwebpmux3:amd64 (1.4.0-0.1+b1) ... Removing libwebpdemux2:amd64 (1.4.0-0.1+b1) ... Removing libsigsegv2:amd64 (2.14-1+b2) ... Removing libsnappy1v5:amd64 (1.2.1-1+b1) ... Removing libsort-naturally-perl (1.03-4) ... Removing libsub-exporter-progressive-perl (0.001013-3) ... Removing libsub-identify-perl (0.14-3+b3) ... Removing libsub-name-perl:amd64 (0.27-1+b3) ... Removing libsub-quote-perl (2.006008-1) ... Removing libtest-warn-perl (0.37-2) ... Removing libtest-exception-perl (0.43-3) ... Removing libsub-uplevel-perl (0.2800-3) ... Removing libsvg-perl (2.87-1) ... Removing libtask-weaken-perl (1.06-2) ... Removing python3.13-tk (3.13.1-1) ... Removing libtest-requiresinternet-perl (0.05-4) ... Removing libtext-csv-perl (2.04-1) ... Removing libtext-iconv-perl:amd64 (1.7-8+b4) ... Removing libtie-ixhash-perl (1.23-4) ... Removing libtype-tiny-xs-perl:amd64 (0.025-2+b1) ... Removing libunicode-map-perl (0.112-13+b4) ... Removing liburiparser1:amd64 (0.9.8+dfsg-2) ... Removing libuv1t64:amd64 (1.48.0-7) ... Removing libvariable-magic-perl (0.64-1+b1) ... Removing libvulkan1:amd64 (1.3.296.0-1) ... Removing libwayland-cursor0:amd64 (1.23.0-1+b1) ... Removing libwayland-client0:amd64 (1.23.0-1+b1) ... Removing libwayland-egl1:amd64 (1.23.0-1+b1) ... Removing libwayland-server0:amd64 (1.23.0-1+b1) ... Removing xauth (1:1.1.2-1) ... Removing libxxf86vm1:amd64 (1:1.1.4-1+b3) ... Removing libx11-protocol-perl (0.56-9) ... Removing libxcb-glx0:amd64 (1.17.0-2+b1) ... Removing libxcb-randr0:amd64 (1.17.0-2+b1) ... Removing libxcb-shape0:amd64 (1.17.0-2+b1) ... Removing libxcomposite1:amd64 (1:0.4.6-1) ... Removing libxcursor1:amd64 (1:1.2.2-1+b1) ... Removing libxdamage1:amd64 (1:1.1.6-1+b2) ... Removing libxxf86dga1:amd64 (2:1.1.5-1+b2) ... Removing libxfixes3:amd64 (1:6.0.0-2+b2) ... Removing libxi6:amd64 (2:1.8.2-1) ... Removing libxinerama1:amd64 (2:1.1.4-3+b2) ... Removing libxkbcommon0:amd64 (1.6.0-1+b2) ... Removing libxkbfile1:amd64 (1:1.1.0-1+b2) ... Removing libxml-filter-buffertext-perl (1.01-7) ... Removing libxml-libxslt-perl:amd64 (2.003000-2+b1) ... Removing libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Removing libxml-sax-expat-perl (0.51-2) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::SAX::Expat with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Removing libxml-perl (0.08-4) ... Removing libxml-regexp-perl (0.04-1.1) ... Removing libxml-writer-perl (0.900-2) ... Removing libxml-xpathengine-perl (0.14-2) ... Removing libxmuu1:amd64 (2:1.1.3-3+b3) ... Removing libxrandr2:amd64 (2:1.5.4-1+b1) ... Removing libxstring-perl:amd64 (0.005-2+b4) ... Removing libxtst6:amd64 (2:1.2.3-1.1+b2) ... Removing libxv1:amd64 (2:1.0.11-1.1+b2) ... Removing libyaml-libyaml-perl (0.902.0+ds-2+b1) ... Removing libyaml-perl (1.31-1) ... Removing linux-libc-dev (6.11.10-1) ... Removing linux-sysctl-defaults (4.10.1) ... Removing luit (2.0.20240910-1) ... Removing 'diversion of /usr/bin/luit to /usr/bin/luit.x11-utils by luit' Removing 'diversion of /usr/share/man/man1/luit.1.gz to /usr/share/man/man1/luit.x11-utils.1.gz by luit' Removing lynx-common (2.9.2-1) ... Removing mafft (7.505-1) ... Removing mailcap (3.74) ... Removing make (4.3-4.1) ... Removing manpages-dev (6.9.1-1) ... Removing manpages (6.9.1-1) ... Removing maq (0.7.1-10) ... Removing mariadb-common (1:11.4.3-1) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Removing menu (2.1.50) ... Removing mustang (3.2.4-1) ... Removing mysql-common (5.8+1.1.1) ... Removing ncbi-data (6.1.20170106+dfsg2-5) ... Removing ncoils (2002-9) ... Removing pal2nal (14.1-3) ... Removing paml (4.9j+dfsg-5) ... Removing patch (2.7.6-7) ... Removing phylip (1:3.697+dfsg-4) ... Removing poa (2.0+20060928-9) ... Removing poppler-data (0.4.12-1) ... Removing prank (0.0.170427+dfsg-3) ... Removing primer3 (2.6.1-5) ... Removing probalign (1.4-10) ... Removing probcons (1.12-14) ... Removing proda (1.0-14) ... Removing psmisc (23.7-1) ... Removing publicsuffix (20241025.1547-0.1) ... Removing python3-chardet (5.2.0+dfsg-1) ... Removing python3-cssselect (1.2.0-4) ... Removing python3-cycler (0.12.1-1) ... Removing python3-dateutil (2.9.0-3) ... Removing python3-html5lib (1.2-1) ... Removing python3-kiwisolver (1.4.7-2+b1) ... Removing python3-olefile (0.47-1) ... Removing python3-packaging (24.2-1) ... Removing python3-pyparsing (3.1.2-1) ... Removing python3-pysam (0.22.1+ds-2+b2) ... Removing python3-webencodings (0.5.1-5) ... Removing python3.12-tk (3.12.8-1) ... Removing r-cran-boot (1.3-31-1) ... Removing r-cran-class (7.3-22-2) ... Removing r-cran-cluster (2.1.6-1) ... Removing r-cran-codetools (0.2-20-1) ... Removing r-cran-foreign (0.8.87-1) ... Removing r-cran-kernsmooth (2.23-24-1) ... Removing r-cran-nlme (3.1.166-1) ... Removing r-cran-mass (7.3-61-1) ... Removing r-cran-nnet (7.3-19-2) ... Removing r-doc-html (4.4.2-1) ... Removing raxml (8.2.13+dfsg-1+b1) ... Removing rpcsvc-proto (1.4.3-1) ... Removing sim4 (0.0.20121010-8) ... Removing t-coffee (13.45.0.4846264+really13.41.0.28bdc39+dfsg-1) ... Removing unixodbc-common (2.3.12-1) ... Removing wise-data (2.4.1-25) ... Removing xdg-user-dirs (0.18-1) ... Removing xkb-data (2.42-1) ... Removing xz-utils (5.6.3-1+b1) ... Removing adduser (3.137) ... Removing libatk1.0-0t64:amd64 (2.54.0-1) ... Removing at-spi2-common (2.54.0-1) ... Removing gcc-14 (14.2.0-8) ... Removing binutils (2.43.50.20241204-2) ... Removing gcc-14-x86-64-linux-gnu (14.2.0-8) ... Removing binutils-x86-64-linux-gnu (2.43.50.20241204-2) ... Removing libgprofng0:amd64 (2.43.50.20241204-2) ... Removing libctf0:amd64 (2.43.50.20241204-2) ... Removing libbinutils:amd64 (2.43.50.20241204-2) ... Removing binutils-common:amd64 (2.43.50.20241204-2) ... Removing r-cran-matrix (1.7-1-1) ... Removing cpp-14 (14.2.0-8) ... Removing cpp-14-x86-64-linux-gnu (14.2.0-8) ... Removing graphviz (2.42.4-2+b1) ... Removing libgvc6 (2.42.4-2+b1) ... Removing libgd3:amd64 (2.3.3-12+b1) ... Removing libavif16:amd64 (1.1.1-1) ... Removing libgav1-1:amd64 (0.19.0-2+b2) ... Removing libabsl20230802:amd64 (20230802.1-4) ... Removing libhdf5-103-1t64:amd64 (1.10.10+repack-5+b1) ... Removing libsz2:amd64 (1.1.3-1+b1) ... Removing libaec0:amd64 (1.1.3-1+b1) ... Removing libalgorithm-diff-perl (1.201-1) ... Removing libann0 (1.1.2+doc-9+b1) ... Removing libaom3:amd64 (3.11.0-1) ... Removing systemd (257~rc3-1) ... Removing libapparmor1:amd64 (3.1.7-1+b3) ... Removing libgcc-14-dev:amd64 (14.2.0-8) ... Removing libasan8:amd64 (14.2.0-8) ... Removing shared-mime-info (2.4-5+b1) ... Removing libbio-perl-perl (1.7.8-1) ... Removing libcc1-0:amd64 (14.2.0-8) ... Removing libgvpr2:amd64 (2.42.4-2+b1) ... Removing libcgraph6:amd64 (2.42.4-2+b1) ... Removing libcdt5:amd64 (2.42.4-2+b1) ... Removing libxml-parser-perl (2.47-1+b3) ... Removing libctf-nobfd0:amd64 (2.43.50.20241204-2) ... Removing libproj25:amd64 (9.5.1-1) ... Removing libdata-stag-perl (0.14-3) ... Removing libhts3t64:amd64 (1.20+ds-2) ... Removing mesa-libgallium:amd64 (24.2.8-1) ... Removing libdrm-amdgpu1:amd64 (2.4.123-1) ... Removing libdrm-intel1:amd64 (2.4.123-1) ... Removing libdrm-radeon1:amd64 (2.4.123-1) ... Removing libllvm19:amd64 (1:19.1.4-1) ... Removing libelf1t64:amd64 (0.192-4) ... Removing libraqm0:amd64 (0.10.1-1+b2) ... Removing libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::SAX::PurePerl with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Removing libglapi-mesa:amd64 (24.2.8-1) ... Removing libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2+b1) ... Removing libhtscodecs2:amd64 (1.6.1-1) ... Removing libhwasan0:amd64 (14.2.0-8) ... Removing libxaw7:amd64 (2:1.0.16-1) ... Removing libxmu6:amd64 (2:1.1.3-3+b3) ... Removing libimagequant0:amd64 (2.18.0-1+b2) ... Removing libio-string-perl (1.08-4) ... Removing libisl23:amd64 (0.27-1) ... Removing libitm1:amd64 (14.2.0-8) ... Removing libjansson4:amd64 (2.14-2+b3) ... Removing libyuv0:amd64 (0.0.1898.20241125-1) ... Removing liblab-gamut1:amd64 (2.42.4-2+b1) ... Removing liblsan0:amd64 (14.2.0-8) ... Removing libltdl7:amd64 (2.4.7-8) ... Removing libmpc3:amd64 (1.3.1-1+b3) ... Removing libmpfr6:amd64 (4.2.1-1+b2) ... Removing libpathplan4:amd64 (2.42.4-2+b1) ... Removing libpciaccess0:amd64 (0.17-3+b2) ... Removing libquadmath0:amd64 (14.2.0-8) ... Removing librav1e0.7:amd64 (0.7.1-7+b2) ... Removing libsensors5:amd64 (1:3.6.0-10+b1) ... Removing libsensors-config (1:3.6.0-10) ... Removing libsframe1:amd64 (2.43.50.20241204-2) ... Removing libsvtav1enc2:amd64 (2.2.1+dfsg-2) ... Removing libsystemd-shared:amd64 (257~rc3-1) ... Removing libtsan2:amd64 (14.2.0-8) ... Removing libubsan1:amd64 (14.2.0-8) ... Removing libx11-xcb1:amd64 (2:1.8.10-2) ... Removing libxcb-xfixes0:amd64 (1.17.0-2+b1) ... Removing libxcb-sync1:amd64 (1.17.0-2+b1) ... Removing libxcb-dri2-0:amd64 (1.17.0-2+b1) ... Removing libxcb-dri3-0:amd64 (1.17.0-2+b1) ... Removing libxcb-present0:amd64 (1.17.0-2+b1) ... Removing libxml-namespacesupport-perl (1.12-2) ... Removing libxml-sax-base-perl (1.09-3) ... Removing libxpm4:amd64 (1:3.5.17-1+b2) ... Removing libxshmfence1:amd64 (1.3-1+b2) ... Removing libz3-4:amd64 (4.13.3-1) ... Removing proj-data (9.5.1-1) ... Removing r-cran-lattice (0.22-6-1) ... Removing r-base-core (4.4.2-1) ... Removing libpangocairo-1.0-0:amd64 (1.55.0+ds-3) ... Removing libpangoft2-1.0-0:amd64 (1.55.0+ds-3) ... Removing libpango-1.0-0:amd64 (1.55.0+ds-3) ... Removing fontconfig (2.15.0-1.1+b1) ... Removing libtk8.6:amd64 (8.6.15-1) ... Removing libxft2:amd64 (2.3.6-1+b2) ... Removing libcairo2:amd64 (1.18.2-2) ... Removing libcurl3t64-gnutls:amd64 (8.11.0-1) ... Removing libcurl4t64:amd64 (8.11.0-1) ... Removing libthai0:amd64 (0.1.29-2+b1) ... Removing libdatrie1:amd64 (0.2.13-3+b1) ... Removing libtiff6:amd64 (4.5.1+git230720-5) ... Removing libdeflate0:amd64 (1.22-1) ... Removing libdrm2:amd64 (2.4.123-1) ... Removing libdrm-common (2.4.123-1) ... Removing libharfbuzz0b:amd64 (10.0.1-1) ... Removing libfribidi0:amd64 (1.0.15-1) ... Removing libpaper-utils (1.1.29+b2) ... Removing libpaper1:amd64 (1.1.29+b2) ... Removing ucf (3.0045) ... Removing libgomp1:amd64 (14.2.0-8) ... Removing libgraphite2-3:amd64 (1.3.14-2+b1) ... Removing libxt6t64:amd64 (1:1.2.1-1.2+b1) ... Removing libsm6:amd64 (2:1.2.4-1) ... Removing libice6:amd64 (2:1.1.1-1) ... Removing libjbig0:amd64 (2.1-6.1+b2) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ... Removing libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Removing liblerc4:amd64 (4.0.0+ds-5) ... Removing procps (2:4.0.4-6) ... Removing libnghttp2-14:amd64 (1.64.0-1) ... Removing libnghttp3-9:amd64 (1.6.0-2) ... Removing libngtcp2-crypto-gnutls8:amd64 (1.9.1-1) ... Removing libngtcp2-16:amd64 (1.9.1-1) ... Removing libpixman-1-0:amd64 (0.44.0-3) ... Removing libproc2-0:amd64 (2:4.0.4-6) ... Removing libpsl5t64:amd64 (0.21.2-1.1+b1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Removing libwebp7:amd64 (1.4.0-0.1+b1) ... Removing libssh2-1t64:amd64 (1.11.1-1) ... Removing libtcl8.6:amd64 (8.6.15+dfsg-2) ... Removing libthai-data (0.1.29-2) ... Removing libxcb-render0:amd64 (1.17.0-2+b1) ... Removing libxcb-shm0:amd64 (1.17.0-2+b1) ... Removing libxrender1:amd64 (1:0.9.10-1.1+b2) ... Removing libxss1:amd64 (1:1.2.3-1+b2) ... Removing sensible-utils (0.0.24) ... Removing unzip (6.0-28) ... Removing xdg-utils (1.2.1-2) ... Removing zip (3.0-14) ... Removing libfontconfig1:amd64 (2.15.0-1.1+b1) ... Removing fontconfig-config (2.15.0-1.1+b1) ... Removing fonts-urw-base35 (20200910-8) ... Removing libglib2.0-0t64:amd64 (2.82.2-3) ... Removing libatomic1:amd64 (14.2.0-8) ... Removing xfonts-utils (1:7.7+7) ... Removing libfontenc1:amd64 (1:1.1.8-1+b1) ... Removing libfreetype6:amd64 (2.13.3+dfsg-1) ... Removing libpng16-16t64:amd64 (1.6.44-2) ... Removing libxext6:amd64 (2:1.3.4-1+b2) ... Removing xfonts-encodings (1:1.0.4-2.2) ... Removing x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libbrotli1:amd64 (1.1.0-2+b6) ... Removing libx11-6:amd64 (2:1.8.10-2) ... Removing libx11-data (2:1.8.10-2) ... Removing libxcb1:amd64 (1.17.0-2+b1) ... Removing libxau6:amd64 (1:1.0.11-1) ... Removing libxdmcp6:amd64 (1:1.1.5-1) ... Removing ruby3.1 (3.1.2-8.4) ... Removing rubygems-integration (1.18) ... Removing dmsetup (2:1.02.201-1) ... Removing libdevmapper1.02.1:amd64 (2:1.02.201-1) ... Removing python3-ufolib2 (0.17.0+dfsg1-1) ... Removing libwww-perl (6.77-1) ... Removing libhttp-negotiate-perl (6.01-2) ... Removing libheif1:amd64 (1.19.3-1) ... Removing libheif-plugin-dav1d:amd64 (1.19.3-1) ... Removing libdav1d7:amd64 (1.5.0-1+b1) ... Removing ruby-sdbm:amd64 (1.0.0-5+b5) ... Removing libfile-listing-perl (6.16-1) ... Removing libhttp-cookies-perl (6.11-1) ... Removing libwww-robotrules-perl (6.02-1) ... Removing libhtml-tree-perl (5.07-3) ... Removing libhtml-parser-perl:amd64 (3.83-1+b1) ... Removing libhtml-tagset-perl (3.24-1) ... Removing liblwp-protocol-https-perl (6.14-1) ... Removing libio-socket-ssl-perl (2.089-1) ... Removing libnet-http-perl (6.23-1) ... Removing libnet-ssleay-perl:amd64 (1.94-2) ... Removing libsharpyuv0:amd64 (1.4.0-0.1+b1) ... Removing libtry-tiny-perl (0.32-1) ... Removing perl-openssl-defaults:amd64 (7+b2) ... Removing python3-attr (23.2.0-2) ... Removing libruby3.1t64:amd64 (3.1.2-8.4) ... Removing rake (13.2.1-1) ... Removing ruby (1:3.1+nmu1) ... Removing ruby-rubygems (3.4.20-1) ... Removing ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing python3-fonttools (4.55.0-3) ... Removing python3-scipy (1.13.1-6) ... Removing python3-numpy (1:1.26.4+ds-12) ... Removing liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Removing libhttp-message-perl (7.00-2) ... Removing libclone-perl:amd64 (0.47-1+b1) ... Removing libheif-plugin-libde265:amd64 (1.19.3-1) ... Removing libde265-0:amd64 (1.0.15-1+b2) ... Removing libedit2:amd64 (3.1-20240808-1) ... Removing libencode-locale-perl (1.05-3) ... Removing python3-sympy (1.13.3-1) ... Removing python3-fs (2.4.16-5) ... Removing python3-pkg-resources (75.2.0-1) ... Removing python3-unicodedata2 (15.1.0+ds-1+b3) ... Removing python3-inflect (7.3.1-2) ... Removing python3-typeguard (4.4.1-1) ... Removing libhttp-date-perl (6.06-1) ... Removing liburi-perl (5.30-1) ... Removing liblapack3:amd64 (3.12.0-4) ... Removing libgfortran5:amd64 (14.2.0-8) ... Removing python3-lxml:amd64 (5.3.0-1+b1) ... Removing libio-html-perl (1.004-3) ... Removing liblwp-mediatypes-perl (6.04-2) ... Removing libncurses6:amd64 (6.5-2+b1) ... Removing libruby:amd64 (1:3.1+nmu1) ... Removing libtimedate-perl (2.3300-2) ... Removing libxslt1.1:amd64 (1.1.35-1.1+b1) ... Removing libyaml-0-2:amd64 (0.2.5-1+b2) ... Removing openssl (3.3.2-2) ... Removing python3-appdirs (1.4.4-4) ... Removing python3-autocommand (2.2.2-3) ... Removing python3-brotli (1.1.0-2+b6) ... Removing python3-decorator (5.1.1-5) ... Removing python3-jaraco.context (6.0.0-1) ... Removing python3-jaraco.functools (4.1.0-1) ... Removing python3-lz4 (4.4.0+dfsg-1) ... Removing python3-more-itertools (10.5.0-1) ... Removing python3-mpmath (1.3.0-1) ... Removing python3-typing-extensions (4.12.2-2) ... Removing python3-tz (2024.1-2) ... Removing ruby-net-telnet (0.2.0-1) ... Removing ruby-xmlrpc (0.3.3-2) ... Removing ruby-webrick (1.8.1-1) ... Removing unicode-data (15.1.0-1) ... Removing libblas3:amd64 (3.12.0-4) ... Removing python3 (3.12.6-1) ... Removing python3.12 (3.12.8-1) ... Removing python3-minimal (3.12.6-1) ... Removing python3.12-minimal (3.12.8-1) ... Removing libexpat1:amd64 (2.6.4-1) ... Removing perl (5.40.0-8) ... Removing libperl5.40:amd64 (5.40.0-8) ... Removing libgdbm-compat4t64:amd64 (1.24-2) ... Removing libgdbm6t64:amd64 (1.24-2) ... Removing libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Removing libicu72:amd64 (72.1-5+b1) ... Removing libpython3-stdlib:amd64 (3.12.6-1) ... Removing libpython3.12-stdlib:amd64 (3.12.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libncursesw6:amd64 (6.5-2+b1) ... Removing libnsl2:amd64 (1.3.0-3+b3) ... Removing libpython3.12-minimal:amd64 (3.12.8-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.2-5) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsqlite3-0:amd64 (3.46.1-1) ... Removing media-types (10.1.0) ... Removing netbase (6.4) ... Removing perl-modules-5.40 (5.40.0-8) ... Removing readline-common (8.2-5) ... Removing libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Removing libgssapi-krb5-2:amd64 (1.21.3-3) ... Removing libkrb5-3:amd64 (1.21.3-3) ... Removing libk5crypto3:amd64 (1.21.3-3) ... Removing libkeyutils1:amd64 (1.6.3-4) ... Removing libkrb5support0:amd64 (1.21.3-3) ... Removing libtirpc-common (1.3.4+ds-1.3) ... Processing triggers for libc-bin (2.40-4) ... 3m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', 'remove', 'adduser', 'adwaita-icon-theme', 'alsa-topology-conf', 'alsa-ucm-conf', 'amap-align', 'apache2-bin', 'at-spi2-common', 'at-spi2-core', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bioperl', 'bioperl-run', 'blends-common', 'blt', 'build-essential', 'bwa', 'bzip2', 'bzip2-doc', 'ca-certificates', 'ca-certificates-java', 'clustalo', 'clustalw', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jdk-headless', 'default-jre', 'default-jre-headless', 'dialign-tx', 'dialign-tx-data', 'dirmngr', 'dmsetup', 'dpkg-dev', 'exonerate', 'fakeroot', 'fastaq', 'file', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-droid-fallback', 'fonts-lato', 'fonts-liberation', 'fonts-liberation-sans-narrow', 'fonts-lyx', 'fonts-noto-mono', 'fonts-urw-base35', 'fsa', 'g++-', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gawk', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'gdal-data', 'gdal-plugins:amd64', 'gfortran', 'gfortran-14', 'gfortran-14-x86-64-linux-gnu', 'gfortran-x86-64-linux-gnu', 'ghostscript', 'gnupg', 'gnupg-l10n', 'gnupg-utils', 'gpg', 'gpg-agent', 'gpg-wks-client', 'gpgconf', 'gpgsm', 'graphviz', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'icu-devtools', 'isympy-common', 'isympy3', 'java-common', 'javascript-common', 'kalign', 'kmc', 'krb5-locales', 'lagan', 'libabsl20230802:amd64', 'libace-perl', 'libaec0:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl:amd64', 'libalgorithm-merge-perl', 'libalgorithm-munkres-perl', 'libann0', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapache2-reload-perl', 'libapparmor1:amd64', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libargtable2-0', 'libarmadillo14', 'libarpack2t64:amd64', 'libarray-compare-perl', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libassuan9:amd64', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libauthen-sasl-perl', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libb-hooks-endofscope-perl', 'libb-hooks-op-check-perl:amd64', 'libbambamc0:amd64', 'libbinutils:amd64', 'libbio-asn1-entrezgene-perl', 'libbio-cluster-perl', 'libbio-eutilities-perl', 'libbio-featureio-perl', 'libbio-perl-perl', 'libbio-perl-run-perl', 'libbio-tools-run-remoteblast-perl', 'libbio-variation-perl', 'libbit-vector-perl:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libbrotli1:amd64', 'libbsd-resource-perl', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcache-cache-perl', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcapture-tiny-perl', 'libcarp-clan-perl', 'libcc1-0:amd64', 'libcdt5:amd64', 'libcfitsio10t64:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcgraph6:amd64', 'libclass-data-inheritable-perl', 'libclass-inspector-perl', 'libclass-method-modifiers-perl', 'libclass-xsaccessor-perl', 'libclone-perl:amd64', 'libcloudproviders0:amd64', 'libcolord2:amd64', 'libconvert-binary-c-perl', 'libconvert-binhex-perl', 'libcrypt-dev:amd64', 'libcrypt-rc4-perl', 'libcryptsetup12:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdata-dump-perl', 'libdata-stag-perl', 'libdate-calc-perl', 'libdate-calc-xs-perl:amd64', 'libdate-manip-perl', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbd-mysql-perl:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate-dev:amd64', 'libdeflate0:amd64', 'libdevel-callchecker-perl:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libdevmapper1.02.1:amd64', 'libdigest-perl-md5-perl', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdynaloader-functions-perl', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1t64:amd64', 'libencode-locale-perl', 'libepoxy0:amd64', 'liberror-perl', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfakeroot:amd64', 'libfcgi-bin', 'libfcgi-perl', 'libfcgi0t64:amd64', 'libfile-basedir-perl', 'libfile-desktopentry-perl', 'libfile-fcntllock-perl', 'libfile-listing-perl', 'libfile-mimeinfo-perl', 'libfile-slurp-tiny-perl', 'libfile-sort-perl', 'libfont-afm-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfreezethaw-perl', 'libfribidi0:amd64', 'libfyba0t64:amd64', 'libgav1-1:amd64', 'libgbm1:amd64', 'libgcc-14-dev:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdal35:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-bin', 'libgdk-pixbuf2.0-common', 'libgeos-c1t64:amd64', 'libgeos3.13.0:amd64', 'libgeotiff5:amd64', 'libgfortran-14-dev:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libgles2:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgomp1:amd64', 'libgpgme11t64:amd64', 'libgpgmepp6t64:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraph-perl', 'libgraphite2-3:amd64', 'libgraphviz-perl', 'libgs-common', 'libgs10:amd64', 'libgs10-common', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgts-0.7-5t64:amd64', 'libgts-bin', 'libgvc6', 'libgvpr2:amd64', 'libharfbuzz0b:amd64', 'libhdf4-0-alt:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libheap-perl', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhtml-form-perl', 'libhtml-format-perl', 'libhtml-parser-perl:amd64', 'libhtml-tableextract-perl', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libhwasan0:amd64', 'libice6:amd64', 'libicu-dev:amd64', 'libicu72:amd64', 'libidn12:amd64', 'libijs-0.35:amd64', 'libimagequant0:amd64', 'libimport-into-perl', 'libio-compress-brotli-perl', 'libio-html-perl', 'libio-pty-perl', 'libio-sessiondata-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libio-stringy-perl', 'libipc-run-perl', 'libipc-sharelite-perl', 'libipc-system-simple-perl', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjbig2dec0:amd64', 'libjbzip2-java', 'libjcode-pm-perl', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjson-c5:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1t64:amd64', 'libkmldom1t64:amd64', 'libkmlengine1t64:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libksba8:amd64', 'liblab-gamut1:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'libllvm19:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'liblzma-dev:amd64', 'libmagic-mgc', 'libmagic1t64:amd64', 'libmailtools-perl', 'libmariadb3:amd64', 'libmath-derivative-perl', 'libmath-spline-perl', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libmime-tools-perl', 'libminizip1t64:amd64', 'libmldbm-perl', 'libmodule-implementation-perl', 'libmodule-runtime-perl', 'libmoo-perl', 'libmpc3:amd64', 'libmpfr6:amd64', 'libnamespace-clean-perl', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnet-dbus-perl', 'libnet-http-perl', 'libnet-smtp-ssl-perl', 'libnet-ssleay-perl:amd64', 'libnetcdf19t64:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnpth0t64:amd64', 'libnsl2:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libodbc2:amd64', 'libodbcinst2:amd64', 'libogdi4.1:amd64', 'libole-storage-lite-perl', 'libopenjp2-7:amd64', 'libpackage-stash-perl', 'libpackage-stash-xs-perl:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libparams-classify-perl:amd64', 'libparse-recdescent-perl', 'libpathplan4:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpcre2-32-0:amd64', 'libpcre2-dev:amd64', 'libpcre2-posix3:amd64', 'libpcsclite1:amd64', 'libperl5.40:amd64', 'libpixman-1-0:amd64', 'libpkgconf3:amd64', 'libpng-dev:amd64', 'libpng-tools', 'libpng16-16t64:amd64', 'libpoppler140:amd64', 'libpostscript-perl', 'libpq5:amd64', 'libproc2-0:amd64', 'libproj25:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'librav1e0.7:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'libreadonly-perl', 'libref-util-perl', 'libref-util-xs-perl', 'librole-tiny-perl', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'librtmp1:amd64', 'librttopo1:amd64', 'libruby:amd64', 'libruby3.1t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libset-object-perl', 'libset-scalar-perl', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libsigsegv2:amd64', 'libsm6:amd64', 'libsnappy1v5:amd64', 'libsoap-lite-perl', 'libsort-naturally-perl', 'libspatialite8t64:amd64', 'libspreadsheet-parseexcel-perl', 'libspreadsheet-writeexcel-perl', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstatistics-descriptive-perl', 'libstdc++-14-dev:amd64', 'libsub-exporter-progressive-perl', 'libsub-identify-perl', 'libsub-name-perl:amd64', 'libsub-quote-perl', 'libsub-uplevel-perl', 'libsvg-graph-perl', 'libsvg-perl', 'libsvtav1enc2:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libtask-weaken-perl', 'libtcl8.6:amd64', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-requiresinternet-perl', 'libtest-warn-perl', 'libtext-csv-perl', 'libtext-csv-xs-perl:amd64', 'libtext-diff-perl', 'libtext-iconv-perl:amd64', 'libthai-data', 'libthai0:amd64', 'libtie-ixhash-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtree-dagnode-perl', 'libtry-tiny-perl', 'libtsan2:amd64', 'libtype-tiny-perl', 'libtype-tiny-xs-perl:amd64', 'libubsan1:amd64', 'libunicode-map-perl', 'liburi-perl', 'liburiparser1:amd64', 'libuv1t64:amd64', 'libvariable-magic-perl', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx11-protocol-perl', 'libx11-xcb1:amd64', 'libx265-209:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces-c3.2t64:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-dom-perl', 'libxml-dom-xpath-perl', 'libxml-filter-buffertext-perl', 'libxml-libxml-perl', 'libxml-libxslt-perl:amd64', 'libxml-namespacesupport-perl', 'libxml-parser-perl', 'libxml-perl', 'libxml-regexp-perl', 'libxml-sax-base-perl', 'libxml-sax-expat-perl', 'libxml-sax-perl', 'libxml-sax-writer-perl', 'libxml-simple-perl', 'libxml-twig-perl', 'libxml-writer-perl', 'libxml-xpath-perl', 'libxml-xpathengine-perl', 'libxml2:amd64', 'libxmlrpc-lite-perl', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxstring-perl:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyaml-libyaml-perl', 'libyaml-perl', 'libyuv0:amd64', 'libz3-4:amd64', 'linux-libc-dev', 'linux-sysctl-defaults', 'luit', 'lynx', 'lynx-common', 'mafft', 'mailcap', 'make', 'manpages', 'manpages-dev', 'maq', 'mariadb-common', 'med-config', 'media-types', 'menu', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'mummer', 'muscle', 'mustang', 'mysql-common', 'ncbi-blast+-', 'ncbi-blast+-legacy', 'ncbi-data', 'ncoils', 'netbase', 'openjdk-21-jdk-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openssl', 'pal2nal', 'paml', 'patch', 'perl', 'perl-doc', 'perl-modules-5.40', 'perl-openssl-defaults:amd64', 'perl-tk', 'phylip', 'pinentry-curses', 'pkgconf:amd64', 'pkgconf-bin', 'poa', 'poppler-data', 'prank', 'primer3', 'probalign', 'probcons', 'procps', 'proda', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python-matplotlib-data', 'python3', 'python3-appdirs', 'python3-attr', 'python3-autocommand', 'python3-brotli', 'python3-bs4', 'python3-chardet', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-fonttools', 'python3-fs', 'python3-gdal', 'python3-html5lib', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-matplotlib', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-networkx', 'python3-numpy', 'python3-olefile', 'python3-packaging', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-pydot', 'python3-pygraphviz', 'python3-pyparsing', 'python3-pysam', 'python3-scipy', 'python3-soupsieve', 'python3-sympy', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-unicodedata2', 'python3-webencodings', 'python3-yaml', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'r-base-core', 'r-base-dev', 'r-cran-boot', 'r-cran-class', 'r-cran-cluster', 'r-cran-codetools', 'r-cran-foreign', 'r-cran-kernsmooth', 'r-cran-lattice', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-nlme', 'r-cran-nnet', 'r-cran-rpart', 'r-cran-spatial', 'r-cran-survival', 'r-doc-html', 'r-recommended', 'rake', 'raxml', 'readline-common', 'rpcsvc-proto', 'ruby', 'ruby-net-telnet', 'ruby-rubygems', 'ruby-sdbm:amd64', 'ruby-webrick', 'ruby-xmlrpc', 'ruby3.1', 'rubygems-integration', 'samtools', 'sensible-utils', 'shared-mime-info', 'sim4', 'smalt', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 't-coffee', 'tk8.6-blt2.5', 'tm-align', 'trimmomatic', 'ucf', 'unicode-data', 'unixodbc-common', 'unzip', 'wise', 'wise-data', 'x11-common', 'x11-utils', 'x11-xserver-utils', 'xauth', 'xdg-user-dirs', 'xdg-utils', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'zutty', 'iva'] 3m17.4s INFO: Running scripts post_remove 3m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_remove_exceptions'] 3m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_remove_exceptions'] 3m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg', '--purge', 'adduser', 'adwaita-icon-theme', 'alsa-topology-conf', 'alsa-ucm-conf', 'amap-align', 'apache2-bin', 'at-spi2-common', 'at-spi2-core', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bioperl', 'bioperl-run', 'blends-common', 'blt', 'build-essential', 'bwa', 'bzip2', 'bzip2-doc', 'ca-certificates', 'ca-certificates-java', 'clustalo', 'clustalw', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jdk-headless', 'default-jre', 'default-jre-headless', 'dialign-tx', 'dialign-tx-data', 'dirmngr', 'dmsetup', 'dpkg-dev', 'exonerate', 'fakeroot', 'fastaq', 'file', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-droid-fallback', 'fonts-lato', 'fonts-liberation', 'fonts-liberation-sans-narrow', 'fonts-lyx', 'fonts-noto-mono', 'fonts-urw-base35', 'fsa', 'g++', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gawk', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'gdal-data', 'gdal-plugins:amd64', 'gfortran', 'gfortran-14', 'gfortran-14-x86-64-linux-gnu', 'gfortran-x86-64-linux-gnu', 'ghostscript', 'gnupg', 'gnupg-l10n', 'gnupg-utils', 'gpg', 'gpg-agent', 'gpg-wks-client', 'gpgconf', 'gpgsm', 'graphviz', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'icu-devtools', 'isympy-common', 'isympy3', 'java-common', 'javascript-common', 'kalign', 'kmc', 'krb5-locales', 'lagan', 'libabsl20230802:amd64', 'libace-perl', 'libaec0:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl:amd64', 'libalgorithm-merge-perl', 'libalgorithm-munkres-perl', 'libann0', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapache2-reload-perl', 'libapparmor1:amd64', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libargtable2-0', 'libarmadillo14', 'libarpack2t64:amd64', 'libarray-compare-perl', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libassuan9:amd64', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libauthen-sasl-perl', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libb-hooks-endofscope-perl', 'libb-hooks-op-check-perl:amd64', 'libbambamc0:amd64', 'libbinutils:amd64', 'libbio-asn1-entrezgene-perl', 'libbio-cluster-perl', 'libbio-eutilities-perl', 'libbio-featureio-perl', 'libbio-perl-perl', 'libbio-perl-run-perl', 'libbio-tools-run-remoteblast-perl', 'libbio-variation-perl', 'libbit-vector-perl:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libbrotli1:amd64', 'libbsd-resource-perl', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcache-cache-perl', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcapture-tiny-perl', 'libcarp-clan-perl', 'libcc1-0:amd64', 'libcdt5:amd64', 'libcfitsio10t64:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcgraph6:amd64', 'libclass-data-inheritable-perl', 'libclass-inspector-perl', 'libclass-method-modifiers-perl', 'libclass-xsaccessor-perl', 'libclone-perl:amd64', 'libcloudproviders0:amd64', 'libcolord2:amd64', 'libconvert-binary-c-perl', 'libconvert-binhex-perl', 'libcrypt-dev:amd64', 'libcrypt-rc4-perl', 'libcryptsetup12:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdata-dump-perl', 'libdata-stag-perl', 'libdate-calc-perl', 'libdate-calc-xs-perl:amd64', 'libdate-manip-perl', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbd-mysql-perl:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate-dev:amd64', 'libdeflate0:amd64', 'libdevel-callchecker-perl:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libdevmapper1.02.1:amd64', 'libdigest-perl-md5-perl', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdynaloader-functions-perl', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1t64:amd64', 'libencode-locale-perl', 'libepoxy0:amd64', 'liberror-perl', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfakeroot:amd64', 'libfcgi-bin', 'libfcgi-perl', 'libfcgi0t64:amd64', 'libfile-basedir-perl', 'libfile-desktopentry-perl', 'libfile-fcntllock-perl', 'libfile-listing-perl', 'libfile-mimeinfo-perl', 'libfile-slurp-tiny-perl', 'libfile-sort-perl', 'libfont-afm-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfreezethaw-perl', 'libfribidi0:amd64', 'libfyba0t64:amd64', 'libgav1-1:amd64', 'libgbm1:amd64', 'libgcc-14-dev:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdal35:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-bin', 'libgdk-pixbuf2.0-common', 'libgeos-c1t64:amd64', 'libgeos3.13.0:amd64', 'libgeotiff5:amd64', 'libgfortran-14-dev:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libgles2:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgomp1:amd64', 'libgpgme11t64:amd64', 'libgpgmepp6t64:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraph-perl', 'libgraphite2-3:amd64', 'libgraphviz-perl', 'libgs-common', 'libgs10:amd64', 'libgs10-common', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgts-0.7-5t64:amd64', 'libgts-bin', 'libgvc6', 'libgvpr2:amd64', 'libharfbuzz0b:amd64', 'libhdf4-0-alt:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libheap-perl', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhtml-form-perl', 'libhtml-format-perl', 'libhtml-parser-perl:amd64', 'libhtml-tableextract-perl', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libhwasan0:amd64', 'libice6:amd64', 'libicu-dev:amd64', 'libicu72:amd64', 'libidn12:amd64', 'libijs-0.35:amd64', 'libimagequant0:amd64', 'libimport-into-perl', 'libio-compress-brotli-perl', 'libio-html-perl', 'libio-pty-perl', 'libio-sessiondata-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libio-stringy-perl', 'libipc-run-perl', 'libipc-sharelite-perl', 'libipc-system-simple-perl', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjbig2dec0:amd64', 'libjbzip2-java', 'libjcode-pm-perl', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjson-c5:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1t64:amd64', 'libkmldom1t64:amd64', 'libkmlengine1t64:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libksba8:amd64', 'liblab-gamut1:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'libllvm19:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'liblzma-dev:amd64', 'libmagic-mgc', 'libmagic1t64:amd64', 'libmailtools-perl', 'libmariadb3:amd64', 'libmath-derivative-perl', 'libmath-spline-perl', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libmime-tools-perl', 'libminizip1t64:amd64', 'libmldbm-perl', 'libmodule-implementation-perl', 'libmodule-runtime-perl', 'libmoo-perl', 'libmpc3:amd64', 'libmpfr6:amd64', 'libnamespace-clean-perl', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnet-dbus-perl', 'libnet-http-perl', 'libnet-smtp-ssl-perl', 'libnet-ssleay-perl:amd64', 'libnetcdf19t64:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnpth0t64:amd64', 'libnsl2:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libodbc2:amd64', 'libodbcinst2:amd64', 'libogdi4.1:amd64', 'libole-storage-lite-perl', 'libopenjp2-7:amd64', 'libpackage-stash-perl', 'libpackage-stash-xs-perl:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libparams-classify-perl:amd64', 'libparse-recdescent-perl', 'libpathplan4:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpcre2-32-0:amd64', 'libpcre2-dev:amd64', 'libpcre2-posix3:amd64', 'libpcsclite1:amd64', 'libperl5.40:amd64', 'libpixman-1-0:amd64', 'libpkgconf3:amd64', 'libpng-dev:amd64', 'libpng-tools', 'libpng16-16t64:amd64', 'libpoppler140:amd64', 'libpostscript-perl', 'libpq5:amd64', 'libproc2-0:amd64', 'libproj25:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'librav1e0.7:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'libreadonly-perl', 'libref-util-perl', 'libref-util-xs-perl', 'librole-tiny-perl', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'librtmp1:amd64', 'librttopo1:amd64', 'libruby:amd64', 'libruby3.1t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libset-object-perl', 'libset-scalar-perl', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libsigsegv2:amd64', 'libsm6:amd64', 'libsnappy1v5:amd64', 'libsoap-lite-perl', 'libsort-naturally-perl', 'libspatialite8t64:amd64', 'libspreadsheet-parseexcel-perl', 'libspreadsheet-writeexcel-perl', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstatistics-descriptive-perl', 'libstdc++-14-dev:amd64', 'libsub-exporter-progressive-perl', 'libsub-identify-perl', 'libsub-name-perl:amd64', 'libsub-quote-perl', 'libsub-uplevel-perl', 'libsvg-graph-perl', 'libsvg-perl', 'libsvtav1enc2:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libtask-weaken-perl', 'libtcl8.6:amd64', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-requiresinternet-perl', 'libtest-warn-perl', 'libtext-csv-perl', 'libtext-csv-xs-perl:amd64', 'libtext-diff-perl', 'libtext-iconv-perl:amd64', 'libthai-data', 'libthai0:amd64', 'libtie-ixhash-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtree-dagnode-perl', 'libtry-tiny-perl', 'libtsan2:amd64', 'libtype-tiny-perl', 'libtype-tiny-xs-perl:amd64', 'libubsan1:amd64', 'libunicode-map-perl', 'liburi-perl', 'liburiparser1:amd64', 'libuv1t64:amd64', 'libvariable-magic-perl', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx11-protocol-perl', 'libx11-xcb1:amd64', 'libx265-209:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces-c3.2t64:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-dom-perl', 'libxml-dom-xpath-perl', 'libxml-filter-buffertext-perl', 'libxml-libxml-perl', 'libxml-libxslt-perl:amd64', 'libxml-namespacesupport-perl', 'libxml-parser-perl', 'libxml-perl', 'libxml-regexp-perl', 'libxml-sax-base-perl', 'libxml-sax-expat-perl', 'libxml-sax-perl', 'libxml-sax-writer-perl', 'libxml-simple-perl', 'libxml-twig-perl', 'libxml-writer-perl', 'libxml-xpath-perl', 'libxml-xpathengine-perl', 'libxml2:amd64', 'libxmlrpc-lite-perl', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxstring-perl:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyaml-libyaml-perl', 'libyaml-perl', 'libyuv0:amd64', 'libz3-4:amd64', 'linux-libc-dev', 'linux-sysctl-defaults', 'luit', 'lynx', 'lynx-common', 'mafft', 'mailcap', 'make', 'manpages', 'manpages-dev', 'maq', 'mariadb-common', 'med-config', 'media-types', 'menu', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'mummer', 'muscle', 'mustang', 'mysql-common', 'ncbi-blast+', 'ncbi-blast+-legacy', 'ncbi-data', 'ncoils', 'netbase', 'openjdk-21-jdk-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openssl', 'pal2nal', 'paml', 'patch', 'perl', 'perl-doc', 'perl-modules-5.40', 'perl-openssl-defaults:amd64', 'perl-tk', 'phylip', 'pinentry-curses', 'pkgconf:amd64', 'pkgconf-bin', 'poa', 'poppler-data', 'prank', 'primer3', 'probalign', 'probcons', 'procps', 'proda', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python-matplotlib-data', 'python3', 'python3-appdirs', 'python3-attr', 'python3-autocommand', 'python3-brotli', 'python3-bs4', 'python3-chardet', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-fonttools', 'python3-fs', 'python3-gdal', 'python3-html5lib', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-matplotlib', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-networkx', 'python3-numpy', 'python3-olefile', 'python3-packaging', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-pydot', 'python3-pygraphviz', 'python3-pyparsing', 'python3-pysam', 'python3-scipy', 'python3-soupsieve', 'python3-sympy', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-unicodedata2', 'python3-webencodings', 'python3-yaml', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'r-base-core', 'r-base-dev', 'r-cran-boot', 'r-cran-class', 'r-cran-cluster', 'r-cran-codetools', 'r-cran-foreign', 'r-cran-kernsmooth', 'r-cran-lattice', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-nlme', 'r-cran-nnet', 'r-cran-rpart', 'r-cran-spatial', 'r-cran-survival', 'r-doc-html', 'r-recommended', 'rake', 'raxml', 'readline-common', 'rpcsvc-proto', 'ruby', 'ruby-net-telnet', 'ruby-rubygems', 'ruby-sdbm:amd64', 'ruby-webrick', 'ruby-xmlrpc', 'ruby3.1', 'rubygems-integration', 'samtools', 'sensible-utils', 'shared-mime-info', 'sim4', 'smalt', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 't-coffee', 'tk8.6-blt2.5', 'tm-align', 'trimmomatic', 'ucf', 'unicode-data', 'unixodbc-common', 'unzip', 'wise', 'wise-data', 'x11-common', 'x11-utils', 'x11-xserver-utils', 'xauth', 'xdg-user-dirs', 'xdg-utils', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'zutty'] 3m19.0s DUMP: (Reading database ... 5399 files and directories currently installed.) Purging configuration files for adduser (3.137) ... Purging configuration files for adwaita-icon-theme (47.0-2) ... dpkg: warning: ignoring request to remove alsa-topology-conf which isn't installed dpkg: warning: ignoring request to remove alsa-ucm-conf which isn't installed dpkg: warning: ignoring request to remove amap-align which isn't installed dpkg: warning: ignoring request to remove apache2-bin which isn't installed dpkg: warning: ignoring request to remove at-spi2-common which isn't installed Purging configuration files for at-spi2-core (2.54.0-1) ... dpkg: warning: ignoring request to remove binutils which isn't installed Purging configuration files for binutils-common:amd64 (2.43.50.20241204-2) ... dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove bioperl which isn't installed dpkg: warning: ignoring request to remove bioperl-run which isn't installed Purging configuration files for blends-common (0.7.7) ... dpkg: warning: ignoring request to remove blt which isn't installed dpkg: warning: ignoring request to remove build-essential which isn't installed dpkg: warning: ignoring request to remove bwa which isn't installed dpkg: warning: ignoring request to remove bzip2 which isn't installed dpkg: warning: ignoring request to remove bzip2-doc which isn't installed Purging configuration files for ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for ca-certificates-java (20240118) ... dpkg: warning: ignoring request to remove clustalo which isn't installed Purging configuration files for clustalw (2.1+lgpl-7) ... Purging configuration files for cpp (4:14.2.0-1) ... dpkg: warning: ignoring request to remove cpp-14 which isn't installed dpkg: warning: ignoring request to remove cpp-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove cpp-x86-64-linux-gnu which isn't installed Purging configuration files for dbus (1.14.10-6) ... rmdir: failed to remove '/var/run/dbus': Directory not empty rmdir: failed to remove '/var/lib/dbus': Directory not empty dpkg: warning: while removing dbus, directory '/var/lib/dbus' not empty so not removed dpkg: warning: ignoring request to remove dbus-bin which isn't installed Purging configuration files for dbus-daemon (1.14.10-6) ... dpkg: warning: ignoring request to remove dbus-session-bus-common which isn't installed dpkg: warning: ignoring request to remove dbus-system-bus-common which isn't installed Purging configuration files for dbus-user-session (1.14.10-6) ... dpkg: warning: ignoring request to remove dconf-gsettings-backend which isn't installed dpkg: warning: ignoring request to remove dconf-service which isn't installed dpkg: warning: ignoring request to remove default-jdk-headless which isn't installed dpkg: warning: ignoring request to remove default-jre which isn't installed dpkg: warning: ignoring request to remove default-jre-headless which isn't installed dpkg: warning: ignoring request to remove dialign-tx which isn't installed dpkg: warning: ignoring request to remove dialign-tx-data which isn't installed Purging configuration files for dirmngr (2.2.45-2) ... dpkg: warning: ignoring request to remove dmsetup which isn't installed Purging configuration files for dpkg-dev (1.22.11) ... dpkg: warning: ignoring request to remove exonerate which isn't installed dpkg: warning: ignoring request to remove fakeroot which isn't installed dpkg: warning: ignoring request to remove fastaq which isn't installed dpkg: warning: ignoring request to remove file which isn't installed Purging configuration files for fontconfig (2.15.0-1.1+b1) ... Purging configuration files for fontconfig-config (2.15.0-1.1+b1) ... dpkg: warning: while removing fontconfig-config, directory '/etc/fonts/conf.d' not empty so not removed Purging configuration files for fonts-dejavu-core (2.37-8) ... dpkg: warning: ignoring request to remove fonts-dejavu-extra which isn't installed Purging configuration files for fonts-dejavu-mono (2.37-8) ... Purging configuration files for fonts-droid-fallback (1:8.1.0r7-1~1.gbp36536b) ... dpkg: warning: ignoring request to remove fonts-lato which isn't installed dpkg: warning: ignoring request to remove fonts-liberation which isn't installed dpkg: warning: ignoring request to remove fonts-liberation-sans-narrow which isn't installed dpkg: warning: ignoring request to remove fonts-lyx which isn't installed Purging configuration files for fonts-noto-mono (20201225-2) ... dpkg: warning: while removing fonts-noto-mono, directory '/etc/fonts' not empty so not removed Purging configuration files for fonts-urw-base35 (20200910-8) ... dpkg: warning: ignoring request to remove fsa which isn't installed dpkg: warning: ignoring request to remove g++ which isn't installed dpkg: warning: ignoring request to remove g++-14 which isn't installed dpkg: warning: ignoring request to remove g++-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove g++-x86-64-linux-gnu which isn't installed Purging configuration files for gawk (1:5.2.1-2+b1) ... dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-14 which isn't installed dpkg: warning: ignoring request to remove gcc-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gcc-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gdal-data which isn't installed dpkg: warning: ignoring request to remove gdal-plugins which isn't installed dpkg: warning: ignoring request to remove gfortran which isn't installed dpkg: warning: ignoring request to remove gfortran-14 which isn't installed dpkg: warning: ignoring request to remove gfortran-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gfortran-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove ghostscript which isn't installed dpkg: warning: ignoring request to remove gnupg which isn't installed dpkg: warning: ignoring request to remove gnupg-l10n which isn't installed dpkg: warning: ignoring request to remove gnupg-utils which isn't installed dpkg: warning: ignoring request to remove gpg which isn't installed Purging configuration files for gpg-agent (2.2.45-2) ... dpkg: warning: ignoring request to remove gpg-wks-client which isn't installed dpkg: warning: ignoring request to remove gpgconf which isn't installed dpkg: warning: ignoring request to remove gpgsm which isn't installed Purging configuration files for graphviz (2.42.4-2+b1) ... dpkg: warning: ignoring request to remove gsettings-desktop-schemas which isn't installed dpkg: warning: ignoring request to remove gtk-update-icon-cache which isn't installed dpkg: warning: ignoring request to remove hicolor-icon-theme which isn't installed dpkg: warning: ignoring request to remove icu-devtools which isn't installed dpkg: warning: ignoring request to remove isympy-common which isn't installed dpkg: warning: ignoring request to remove isympy3 which isn't installed Purging configuration files for java-common (0.76) ... Purging configuration files for javascript-common (11+nmu1) ... dpkg: warning: ignoring request to remove kalign which isn't installed dpkg: warning: ignoring request to remove kmc which isn't installed dpkg: warning: ignoring request to remove krb5-locales which isn't installed dpkg: warning: ignoring request to remove lagan which isn't installed dpkg: warning: ignoring request to remove libabsl20230802 which isn't installed dpkg: warning: ignoring request to remove libace-perl which isn't installed dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libalgorithm-diff-perl which isn't installed dpkg: warning: ignoring request to remove libalgorithm-diff-xs-perl which isn't installed dpkg: warning: ignoring request to remove libalgorithm-merge-perl which isn't installed dpkg: warning: ignoring request to remove libalgorithm-munkres-perl which isn't installed dpkg: warning: ignoring request to remove libann0 which isn't installed dpkg: warning: ignoring request to remove libaom3 which isn't installed dpkg: warning: ignoring request to remove libapache-dbi-perl which isn't installed Purging configuration files for libapache2-mod-perl2 (2.0.13-2+b1) ... dpkg: warning: ignoring request to remove libapache2-reload-perl which isn't installed dpkg: warning: ignoring request to remove libapparmor1 which isn't installed dpkg: warning: ignoring request to remove libapr1t64 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-dbd-sqlite3 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-ldap which isn't installed dpkg: warning: ignoring request to remove libaprutil1t64 which isn't installed dpkg: warning: ignoring request to remove libargtable2-0 which isn't installed dpkg: warning: ignoring request to remove libarmadillo14 which isn't installed dpkg: warning: ignoring request to remove libarpack2t64 which isn't installed dpkg: warning: ignoring request to remove libarray-compare-perl which isn't installed dpkg: warning: ignoring request to remove libasan8 which isn't installed dpkg: warning: ignoring request to remove libasound2-data which isn't installed dpkg: warning: ignoring request to remove libasound2t64 which isn't installed dpkg: warning: ignoring request to remove libassuan9 which isn't installed dpkg: warning: ignoring request to remove libatk-bridge2.0-0t64 which isn't installed dpkg: warning: ignoring request to remove libatk-wrapper-java which isn't installed dpkg: warning: ignoring request to remove libatk-wrapper-java-jni which isn't installed dpkg: warning: ignoring request to remove libatk1.0-0t64 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libatspi2.0-0t64 which isn't installed dpkg: warning: ignoring request to remove libauthen-sasl-perl which isn't installed dpkg: warning: ignoring request to remove libavahi-client3 which isn't installed dpkg: warning: ignoring request to remove libavahi-common-data which isn't installed dpkg: warning: ignoring request to remove libavahi-common3 which isn't installed dpkg: warning: ignoring request to remove libavif16 which isn't installed dpkg: warning: ignoring request to remove libb-hooks-endofscope-perl which isn't installed dpkg: warning: ignoring request to remove libb-hooks-op-check-perl which isn't installed dpkg: warning: ignoring request to remove libbambamc0 which isn't installed dpkg: warning: ignoring request to remove libbinutils which isn't installed dpkg: warning: ignoring request to remove libbio-asn1-entrezgene-perl which isn't installed dpkg: warning: ignoring request to remove libbio-cluster-perl which isn't installed dpkg: warning: ignoring request to remove libbio-eutilities-perl which isn't installed dpkg: warning: ignoring request to remove libbio-featureio-perl which isn't installed dpkg: warning: ignoring request to remove libbio-perl-perl which isn't installed dpkg: warning: ignoring request to remove libbio-perl-run-perl which isn't installed dpkg: warning: ignoring request to remove libbio-tools-run-remoteblast-perl which isn't installed dpkg: warning: ignoring request to remove libbio-variation-perl which isn't installed dpkg: warning: ignoring request to remove libbit-vector-perl which isn't installed dpkg: warning: ignoring request to remove libblas-dev which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libblosc1 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libbsd-resource-perl which isn't installed dpkg: warning: ignoring request to remove libbz2-dev which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcache-cache-perl which isn't installed dpkg: warning: ignoring request to remove libcairo-gobject2 which isn't installed dpkg: warning: ignoring request to remove libcairo2 which isn't installed dpkg: warning: ignoring request to remove libcapture-tiny-perl which isn't installed dpkg: warning: ignoring request to remove libcarp-clan-perl which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed dpkg: warning: ignoring request to remove libcdt5 which isn't installed dpkg: warning: ignoring request to remove libcfitsio10t64 which isn't installed dpkg: warning: ignoring request to remove libcgi-fast-perl which isn't installed dpkg: warning: ignoring request to remove libcgi-pm-perl which isn't installed dpkg: warning: ignoring request to remove libcgraph6 which isn't installed dpkg: warning: ignoring request to remove libclass-data-inheritable-perl which isn't installed dpkg: warning: ignoring request to remove libclass-inspector-perl which isn't installed dpkg: warning: ignoring request to remove libclass-method-modifiers-perl which isn't installed dpkg: warning: ignoring request to remove libclass-xsaccessor-perl which isn't installed dpkg: warning: ignoring request to remove libclone-perl which isn't installed dpkg: warning: ignoring request to remove libcloudproviders0 which isn't installed dpkg: warning: ignoring request to remove libcolord2 which isn't installed dpkg: warning: ignoring request to remove libconvert-binary-c-perl which isn't installed dpkg: warning: ignoring request to remove libconvert-binhex-perl which isn't installed Purging configuration files for libcrypt-dev:amd64 (1:4.4.36-5) ... dpkg: warning: ignoring request to remove libcrypt-rc4-perl which isn't installed dpkg: warning: ignoring request to remove libcryptsetup12 which isn't installed dpkg: warning: ignoring request to remove libctf-nobfd0 which isn't installed dpkg: warning: ignoring request to remove libctf0 which isn't installed dpkg: warning: ignoring request to remove libcups2t64 which isn't installed dpkg: warning: ignoring request to remove libcurl3t64-gnutls which isn't installed dpkg: warning: ignoring request to remove libcurl4t64 which isn't installed dpkg: warning: ignoring request to remove libdata-dump-perl which isn't installed dpkg: warning: ignoring request to remove libdata-stag-perl which isn't installed dpkg: warning: ignoring request to remove libdate-calc-perl which isn't installed dpkg: warning: ignoring request to remove libdate-calc-xs-perl which isn't installed dpkg: warning: ignoring request to remove libdate-manip-perl which isn't installed dpkg: warning: ignoring request to remove libdatrie1 which isn't installed dpkg: warning: ignoring request to remove libdav1d7 which isn't installed dpkg: warning: ignoring request to remove libdbd-mysql-perl which isn't installed dpkg: warning: ignoring request to remove libdbd-pg-perl which isn't installed dpkg: warning: ignoring request to remove libdbd-sqlite3-perl which isn't installed dpkg: warning: ignoring request to remove libdbi-perl which isn't installed dpkg: warning: ignoring request to remove libdbus-1-3 which isn't installed dpkg: warning: ignoring request to remove libdconf1 which isn't installed dpkg: warning: ignoring request to remove libde265-0 which isn't installed dpkg: warning: ignoring request to remove libdeflate-dev which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libdevel-callchecker-perl which isn't installed dpkg: warning: ignoring request to remove libdevel-stacktrace-perl which isn't installed dpkg: warning: ignoring request to remove libdevel-symdump-perl which isn't installed dpkg: warning: ignoring request to remove libdevmapper1.02.1 which isn't installed dpkg: warning: ignoring request to remove libdigest-perl-md5-perl which isn't installed dpkg: warning: ignoring request to remove libdpkg-perl which isn't installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which isn't installed dpkg: warning: ignoring request to remove libdrm-common which isn't installed dpkg: warning: ignoring request to remove libdrm-intel1 which isn't installed dpkg: warning: ignoring request to remove libdrm-radeon1 which isn't installed dpkg: warning: ignoring request to remove libdrm2 which isn't installed dpkg: warning: ignoring request to remove libdynaloader-functions-perl which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libegl-mesa0 which isn't installed dpkg: warning: ignoring request to remove libegl1 which isn't installed dpkg: warning: ignoring request to remove libelf1t64 which isn't installed dpkg: warning: ignoring request to remove libencode-locale-perl which isn't installed dpkg: warning: ignoring request to remove libepoxy0 which isn't installed dpkg: warning: ignoring request to remove liberror-perl which isn't installed dpkg: warning: ignoring request to remove libexception-class-perl which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libexporter-tiny-perl which isn't installed Purging configuration files for libfakeroot:amd64 (1.36-1) ... dpkg: warning: ignoring request to remove libfcgi-bin which isn't installed dpkg: warning: ignoring request to remove libfcgi-perl which isn't installed dpkg: warning: ignoring request to remove libfcgi0t64 which isn't installed dpkg: warning: ignoring request to remove libfile-basedir-perl which isn't installed dpkg: warning: ignoring request to remove libfile-desktopentry-perl which isn't installed dpkg: warning: ignoring request to remove libfile-fcntllock-perl which isn't installed dpkg: warning: ignoring request to remove libfile-listing-perl which isn't installed dpkg: warning: ignoring request to remove libfile-mimeinfo-perl which isn't installed dpkg: warning: ignoring request to remove libfile-slurp-tiny-perl which isn't installed dpkg: warning: ignoring request to remove libfile-sort-perl which isn't installed dpkg: warning: ignoring request to remove libfont-afm-perl which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfontenc1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfreexl1 which isn't installed dpkg: warning: ignoring request to remove libfreezethaw-perl which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libfyba0t64 which isn't installed dpkg: warning: ignoring request to remove libgav1-1 which isn't installed dpkg: warning: ignoring request to remove libgbm1 which isn't installed dpkg: warning: ignoring request to remove libgcc-14-dev which isn't installed dpkg: warning: ignoring request to remove libgd-perl which isn't installed dpkg: warning: ignoring request to remove libgd3 which isn't installed dpkg: warning: ignoring request to remove libgdal35 which isn't installed dpkg: warning: ignoring request to remove libgdbm-compat4t64 which isn't installed dpkg: warning: ignoring request to remove libgdbm6t64 which isn't installed Purging configuration files for libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1+b1) ... dpkg: warning: ignoring request to remove libgdk-pixbuf2.0-bin which isn't installed dpkg: warning: ignoring request to remove libgdk-pixbuf2.0-common which isn't installed dpkg: warning: ignoring request to remove libgeos-c1t64 which isn't installed dpkg: warning: ignoring request to remove libgeos3.13.0 which isn't installed dpkg: warning: ignoring request to remove libgeotiff5 which isn't installed dpkg: warning: ignoring request to remove libgfortran-14-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed dpkg: warning: ignoring request to remove libgif7 which isn't installed dpkg: warning: ignoring request to remove libgl1 which isn't installed Purging configuration files for libgl1-mesa-dri:amd64 (24.2.8-1) ... dpkg: warning: ignoring request to remove libglapi-mesa which isn't installed dpkg: warning: ignoring request to remove libgles2 which isn't installed Purging configuration files for libglib2.0-0t64:amd64 (2.82.2-3) ... dpkg: warning: ignoring request to remove libglib2.0-data which isn't installed dpkg: warning: ignoring request to remove libglvnd0 which isn't installed dpkg: warning: ignoring request to remove libglx-mesa0 which isn't installed dpkg: warning: ignoring request to remove libglx0 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgpgme11t64 which isn't installed dpkg: warning: ignoring request to remove libgpgmepp6t64 which isn't installed dpkg: warning: ignoring request to remove libgpm2 which isn't installed dpkg: warning: ignoring request to remove libgprofng0 which isn't installed dpkg: warning: ignoring request to remove libgraph-perl which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed dpkg: warning: ignoring request to remove libgraphviz-perl which isn't installed dpkg: warning: ignoring request to remove libgs-common which isn't installed dpkg: warning: ignoring request to remove libgs10 which isn't installed dpkg: warning: ignoring request to remove libgs10-common which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.21.3-3) ... Purging configuration files for libgtk-3-0t64:amd64 (3.24.43-4) ... dpkg: warning: ignoring request to remove libgtk-3-bin which isn't installed Purging configuration files for libgtk-3-common (3.24.43-4) ... dpkg: warning: ignoring request to remove libgts-0.7-5t64 which isn't installed dpkg: warning: ignoring request to remove libgts-bin which isn't installed Purging configuration files for libgvc6 (2.42.4-2+b1) ... dpkg: warning: ignoring request to remove libgvpr2 which isn't installed dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libhdf4-0-alt which isn't installed dpkg: warning: ignoring request to remove libhdf5-103-1t64 which isn't installed dpkg: warning: ignoring request to remove libhdf5-hl-100t64 which isn't installed dpkg: warning: ignoring request to remove libheap-perl which isn't installed dpkg: warning: ignoring request to remove libheif-plugin-aomenc which isn't installed dpkg: warning: ignoring request to remove libheif-plugin-dav1d which isn't installed dpkg: warning: ignoring request to remove libheif-plugin-libde265 which isn't installed dpkg: warning: ignoring request to remove libheif-plugin-x265 which isn't installed dpkg: warning: ignoring request to remove libheif1 which isn't installed dpkg: warning: ignoring request to remove libhtml-form-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-format-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-parser-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-tableextract-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-tagset-perl which isn't installed dpkg: warning: ignoring request to remove libhtml-tree-perl which isn't installed dpkg: warning: ignoring request to remove libhts3t64 which isn't installed dpkg: warning: ignoring request to remove libhtscodecs2 which isn't installed dpkg: warning: ignoring request to remove libhttp-cookies-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-daemon-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-date-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-message-perl which isn't installed dpkg: warning: ignoring request to remove libhttp-negotiate-perl which isn't installed dpkg: warning: ignoring request to remove libhwasan0 which isn't installed dpkg: warning: ignoring request to remove libice6 which isn't installed dpkg: warning: ignoring request to remove libicu-dev which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libidn12 which isn't installed dpkg: warning: ignoring request to remove libijs-0.35 which isn't installed dpkg: warning: ignoring request to remove libimagequant0 which isn't installed dpkg: warning: ignoring request to remove libimport-into-perl which isn't installed dpkg: warning: ignoring request to remove libio-compress-brotli-perl which isn't installed dpkg: warning: ignoring request to remove libio-html-perl which isn't installed dpkg: warning: ignoring request to remove libio-pty-perl which isn't installed dpkg: warning: ignoring request to remove libio-sessiondata-perl which isn't installed dpkg: warning: ignoring request to remove libio-socket-ssl-perl which isn't installed dpkg: warning: ignoring request to remove libio-string-perl which isn't installed dpkg: warning: ignoring request to remove libio-stringy-perl which isn't installed dpkg: warning: ignoring request to remove libipc-run-perl which isn't installed dpkg: warning: ignoring request to remove libipc-sharelite-perl which isn't installed dpkg: warning: ignoring request to remove libipc-system-simple-perl which isn't installed dpkg: warning: ignoring request to remove libisl23 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjansson4 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjbig2dec0 which isn't installed dpkg: warning: ignoring request to remove libjbzip2-java which isn't installed dpkg: warning: ignoring request to remove libjcode-pm-perl which isn't installed dpkg: warning: ignoring request to remove libjpeg-dev which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo-dev which isn't installed Purging configuration files for libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... dpkg: warning: ignoring request to remove libjs-jquery-ui which isn't installed dpkg: warning: ignoring request to remove libjson-c5 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkmlbase1t64 which isn't installed dpkg: warning: ignoring request to remove libkmldom1t64 which isn't installed dpkg: warning: ignoring request to remove libkmlengine1t64 which isn't installed dpkg: warning: ignoring request to remove libkmod2 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove libksba8 which isn't installed dpkg: warning: ignoring request to remove liblab-gamut1 which isn't installed dpkg: warning: ignoring request to remove liblapack-dev which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblbfgsb0 which isn't installed dpkg: warning: ignoring request to remove liblcms2-2 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed Purging configuration files for libldap-common (2.5.18+dfsg-3) ... dpkg: warning: ignoring request to remove liblerc4 which isn't installed dpkg: warning: ignoring request to remove liblist-moreutils-perl which isn't installed dpkg: warning: ignoring request to remove liblist-moreutils-xs-perl which isn't installed dpkg: warning: ignoring request to remove libllvm19 which isn't installed dpkg: warning: ignoring request to remove liblmdb0 which isn't installed dpkg: warning: ignoring request to remove liblocale-gettext-perl which isn't installed dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove libltdl7 which isn't installed dpkg: warning: ignoring request to remove liblua5.4-0 which isn't installed dpkg: warning: ignoring request to remove liblwp-mediatypes-perl which isn't installed dpkg: warning: ignoring request to remove liblwp-protocol-https-perl which isn't installed dpkg: warning: ignoring request to remove liblzma-dev which isn't installed dpkg: warning: ignoring request to remove libmagic-mgc which isn't installed Purging configuration files for libmagic1t64:amd64 (1:5.45-3+b1) ... dpkg: warning: ignoring request to remove libmailtools-perl which isn't installed dpkg: warning: ignoring request to remove libmariadb3 which isn't installed dpkg: warning: ignoring request to remove libmath-derivative-perl which isn't installed dpkg: warning: ignoring request to remove libmath-spline-perl which isn't installed dpkg: warning: ignoring request to remove libmbedcrypto16 which isn't installed dpkg: warning: ignoring request to remove libmbedtls21 which isn't installed dpkg: warning: ignoring request to remove libmbedx509-7 which isn't installed dpkg: warning: ignoring request to remove libmime-tools-perl which isn't installed dpkg: warning: ignoring request to remove libminizip1t64 which isn't installed dpkg: warning: ignoring request to remove libmldbm-perl which isn't installed dpkg: warning: ignoring request to remove libmodule-implementation-perl which isn't installed dpkg: warning: ignoring request to remove libmodule-runtime-perl which isn't installed dpkg: warning: ignoring request to remove libmoo-perl which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpfr6 which isn't installed dpkg: warning: ignoring request to remove libnamespace-clean-perl which isn't installed dpkg: warning: ignoring request to remove libncurses-dev which isn't installed dpkg: warning: ignoring request to remove libncurses6 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnet-dbus-perl which isn't installed dpkg: warning: ignoring request to remove libnet-http-perl which isn't installed dpkg: warning: ignoring request to remove libnet-smtp-ssl-perl which isn't installed dpkg: warning: ignoring request to remove libnet-ssleay-perl which isn't installed dpkg: warning: ignoring request to remove libnetcdf19t64 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnghttp3-9 which isn't installed dpkg: warning: ignoring request to remove libngtcp2-16 which isn't installed dpkg: warning: ignoring request to remove libngtcp2-crypto-gnutls8 which isn't installed dpkg: warning: ignoring request to remove libnpth0t64 which isn't installed dpkg: warning: ignoring request to remove libnsl2 which isn't installed dpkg: warning: ignoring request to remove libnspr4 which isn't installed Purging configuration files for libnss-systemd:amd64 (257~rc3-1) ... dpkg: warning: ignoring request to remove libnss3 which isn't installed dpkg: warning: ignoring request to remove libnuma1 which isn't installed dpkg: warning: ignoring request to remove libodbc2 which isn't installed dpkg: warning: ignoring request to remove libodbcinst2 which isn't installed dpkg: warning: ignoring request to remove libogdi4.1 which isn't installed dpkg: warning: ignoring request to remove libole-storage-lite-perl which isn't installed dpkg: warning: ignoring request to remove libopenjp2-7 which isn't installed dpkg: warning: ignoring request to remove libpackage-stash-perl which isn't installed dpkg: warning: ignoring request to remove libpackage-stash-xs-perl which isn't installed dpkg: warning: ignoring request to remove libpam-systemd which isn't installed dpkg: warning: ignoring request to remove libpango-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangocairo-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpangoft2-1.0-0 which isn't installed dpkg: warning: ignoring request to remove libpaper-utils which isn't installed Purging configuration files for libpaper1:amd64 (1.1.29+b2) ... dpkg: warning: ignoring request to remove libparams-classify-perl which isn't installed dpkg: warning: ignoring request to remove libparse-recdescent-perl which isn't installed dpkg: warning: ignoring request to remove libpathplan4 which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libpcre2-16-0 which isn't installed dpkg: warning: ignoring request to remove libpcre2-32-0 which isn't installed dpkg: warning: ignoring request to remove libpcre2-dev which isn't installed dpkg: warning: ignoring request to remove libpcre2-posix3 which isn't installed dpkg: warning: ignoring request to remove libpcsclite1 which isn't installed dpkg: warning: ignoring request to remove libperl5.40 which isn't installed dpkg: warning: ignoring request to remove libpixman-1-0 which isn't installed dpkg: warning: ignoring request to remove libpkgconf3 which isn't installed dpkg: warning: ignoring request to remove libpng-dev which isn't installed dpkg: warning: ignoring request to remove libpng-tools which isn't installed dpkg: warning: ignoring request to remove libpng16-16t64 which isn't installed dpkg: warning: ignoring request to remove libpoppler140 which isn't installed dpkg: warning: ignoring request to remove libpostscript-perl which isn't installed dpkg: warning: ignoring request to remove libpq5 which isn't installed dpkg: warning: ignoring request to remove libproc2-0 which isn't installed dpkg: warning: ignoring request to remove libproj25 which isn't installed dpkg: warning: ignoring request to remove libpsl5t64 which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed Purging configuration files for libpython3.12-minimal:amd64 (3.12.8-1) ... dpkg: warning: ignoring request to remove libpython3.12-stdlib which isn't installed dpkg: warning: ignoring request to remove libqhull-r8.0 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libraqm0 which isn't installed dpkg: warning: ignoring request to remove librav1e0.7 which isn't installed dpkg: warning: ignoring request to remove libreadline-dev which isn't installed Purging configuration files for libreadline8t64:amd64 (8.2-5) ... dpkg: warning: ignoring request to remove libreadonly-perl which isn't installed dpkg: warning: ignoring request to remove libref-util-perl which isn't installed dpkg: warning: ignoring request to remove libref-util-xs-perl which isn't installed dpkg: warning: ignoring request to remove librole-tiny-perl which isn't installed dpkg: warning: ignoring request to remove librsvg2-2 which isn't installed dpkg: warning: ignoring request to remove librsvg2-common which isn't installed dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove librttopo1 which isn't installed dpkg: warning: ignoring request to remove libruby which isn't installed dpkg: warning: ignoring request to remove libruby3.1t64 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed Purging configuration files for libsasl2-modules:amd64 (2.1.28+dfsg1-8) ... dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed Purging configuration files for libsensors-config (1:3.6.0-10) ... dpkg: warning: ignoring request to remove libsensors5 which isn't installed dpkg: warning: ignoring request to remove libset-object-perl which isn't installed dpkg: warning: ignoring request to remove libset-scalar-perl which isn't installed dpkg: warning: ignoring request to remove libsframe1 which isn't installed dpkg: warning: ignoring request to remove libsharpyuv0 which isn't installed dpkg: warning: ignoring request to remove libsigsegv2 which isn't installed dpkg: warning: ignoring request to remove libsm6 which isn't installed dpkg: warning: ignoring request to remove libsnappy1v5 which isn't installed dpkg: warning: ignoring request to remove libsoap-lite-perl which isn't installed dpkg: warning: ignoring request to remove libsort-naturally-perl which isn't installed dpkg: warning: ignoring request to remove libspatialite8t64 which isn't installed dpkg: warning: ignoring request to remove libspreadsheet-parseexcel-perl which isn't installed dpkg: warning: ignoring request to remove libspreadsheet-writeexcel-perl which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1t64 which isn't installed dpkg: warning: ignoring request to remove libstatistics-descriptive-perl which isn't installed dpkg: warning: ignoring request to remove libstdc++-14-dev which isn't installed dpkg: warning: ignoring request to remove libsub-exporter-progressive-perl which isn't installed dpkg: warning: ignoring request to remove libsub-identify-perl which isn't installed dpkg: warning: ignoring request to remove libsub-name-perl which isn't installed dpkg: warning: ignoring request to remove libsub-quote-perl which isn't installed dpkg: warning: ignoring request to remove libsub-uplevel-perl which isn't installed dpkg: warning: ignoring request to remove libsvg-graph-perl which isn't installed dpkg: warning: ignoring request to remove libsvg-perl which isn't installed dpkg: warning: ignoring request to remove libsvtav1enc2 which isn't installed dpkg: warning: ignoring request to remove libsystemd-shared which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed dpkg: warning: ignoring request to remove libtask-weaken-perl which isn't installed dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed dpkg: warning: ignoring request to remove libtest-deep-perl which isn't installed dpkg: warning: ignoring request to remove libtest-differences-perl which isn't installed dpkg: warning: ignoring request to remove libtest-exception-perl which isn't installed dpkg: warning: ignoring request to remove libtest-most-perl which isn't installed dpkg: warning: ignoring request to remove libtest-requiresinternet-perl which isn't installed dpkg: warning: ignoring request to remove libtest-warn-perl which isn't installed dpkg: warning: ignoring request to remove libtext-csv-perl which isn't installed dpkg: warning: ignoring request to remove libtext-csv-xs-perl which isn't installed dpkg: warning: ignoring request to remove libtext-diff-perl which isn't installed dpkg: warning: ignoring request to remove libtext-iconv-perl which isn't installed dpkg: warning: ignoring request to remove libthai-data which isn't installed dpkg: warning: ignoring request to remove libthai0 which isn't installed dpkg: warning: ignoring request to remove libtie-ixhash-perl which isn't installed dpkg: warning: ignoring request to remove libtiff6 which isn't installed dpkg: warning: ignoring request to remove libtimedate-perl which isn't installed Purging configuration files for libtirpc-common (1.3.4+ds-1.3) ... dpkg: warning: ignoring request to remove libtirpc-dev which isn't installed Purging configuration files for libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... dpkg: warning: ignoring request to remove libtk8.6 which isn't installed dpkg: warning: ignoring request to remove libtree-dagnode-perl which isn't installed dpkg: warning: ignoring request to remove libtry-tiny-perl which isn't installed dpkg: warning: ignoring request to remove libtsan2 which isn't installed dpkg: warning: ignoring request to remove libtype-tiny-perl which isn't installed dpkg: warning: ignoring request to remove libtype-tiny-xs-perl which isn't installed dpkg: warning: ignoring request to remove libubsan1 which isn't installed dpkg: warning: ignoring request to remove libunicode-map-perl which isn't installed dpkg: warning: ignoring request to remove liburi-perl which isn't installed dpkg: warning: ignoring request to remove liburiparser1 which isn't installed dpkg: warning: ignoring request to remove libuv1t64 which isn't installed dpkg: warning: ignoring request to remove libvariable-magic-perl which isn't installed dpkg: warning: ignoring request to remove libvulkan1 which isn't installed dpkg: warning: ignoring request to remove libwayland-client0 which isn't installed dpkg: warning: ignoring request to remove libwayland-cursor0 which isn't installed dpkg: warning: ignoring request to remove libwayland-egl1 which isn't installed dpkg: warning: ignoring request to remove libwayland-server0 which isn't installed dpkg: warning: ignoring request to remove libwebp7 which isn't installed dpkg: warning: ignoring request to remove libwebpdemux2 which isn't installed dpkg: warning: ignoring request to remove libwebpmux3 which isn't installed dpkg: warning: ignoring request to remove libwww-perl which isn't installed dpkg: warning: ignoring request to remove libwww-robotrules-perl which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libx11-protocol-perl which isn't installed dpkg: warning: ignoring request to remove libx11-xcb1 which isn't installed dpkg: warning: ignoring request to remove libx265-209 which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxaw7 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri2-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-dri3-0 which isn't installed dpkg: warning: ignoring request to remove libxcb-glx0 which isn't installed dpkg: warning: ignoring request to remove libxcb-present0 which isn't installed dpkg: warning: ignoring request to remove libxcb-randr0 which isn't installed dpkg: warning: ignoring request to remove libxcb-render0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shape0 which isn't installed dpkg: warning: ignoring request to remove libxcb-shm0 which isn't installed dpkg: warning: ignoring request to remove libxcb-sync1 which isn't installed dpkg: warning: ignoring request to remove libxcb-xfixes0 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxcomposite1 which isn't installed dpkg: warning: ignoring request to remove libxcursor1 which isn't installed dpkg: warning: ignoring request to remove libxdamage1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxerces-c3.2t64 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxfixes3 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxi6 which isn't installed dpkg: warning: ignoring request to remove libxinerama1 which isn't installed dpkg: warning: ignoring request to remove libxkbcommon0 which isn't installed dpkg: warning: ignoring request to remove libxkbfile1 which isn't installed dpkg: warning: ignoring request to remove libxml-dom-perl which isn't installed dpkg: warning: ignoring request to remove libxml-dom-xpath-perl which isn't installed dpkg: warning: ignoring request to remove libxml-filter-buffertext-perl which isn't installed dpkg: warning: ignoring request to remove libxml-libxml-perl which isn't installed dpkg: warning: ignoring request to remove libxml-libxslt-perl which isn't installed dpkg: warning: ignoring request to remove libxml-namespacesupport-perl which isn't installed dpkg: warning: ignoring request to remove libxml-parser-perl which isn't installed dpkg: warning: ignoring request to remove libxml-perl which isn't installed dpkg: warning: ignoring request to remove libxml-regexp-perl which isn't installed dpkg: warning: ignoring request to remove libxml-sax-base-perl which isn't installed dpkg: warning: ignoring request to remove libxml-sax-expat-perl which isn't installed Purging configuration files for libxml-sax-perl (1.02+dfsg-4) ... dpkg: warning: ignoring request to remove libxml-sax-writer-perl which isn't installed dpkg: warning: ignoring request to remove libxml-simple-perl which isn't installed dpkg: warning: ignoring request to remove libxml-twig-perl which isn't installed dpkg: warning: ignoring request to remove libxml-writer-perl which isn't installed dpkg: warning: ignoring request to remove libxml-xpath-perl which isn't installed dpkg: warning: ignoring request to remove libxml-xpathengine-perl which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxmlrpc-lite-perl which isn't installed dpkg: warning: ignoring request to remove libxmu6 which isn't installed dpkg: warning: ignoring request to remove libxmuu1 which isn't installed dpkg: warning: ignoring request to remove libxpm4 which isn't installed dpkg: warning: ignoring request to remove libxrandr2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxshmfence1 which isn't installed dpkg: warning: ignoring request to remove libxslt1.1 which isn't installed dpkg: warning: ignoring request to remove libxss1 which isn't installed dpkg: warning: ignoring request to remove libxstring-perl which isn't installed dpkg: warning: ignoring request to remove libxt6t64 which isn't installed dpkg: warning: ignoring request to remove libxtst6 which isn't installed dpkg: warning: ignoring request to remove libxv1 which isn't installed dpkg: warning: ignoring request to remove libxxf86dga1 which isn't installed dpkg: warning: ignoring request to remove libxxf86vm1 which isn't installed dpkg: warning: ignoring request to remove libyaml-0-2 which isn't installed dpkg: warning: ignoring request to remove libyaml-libyaml-perl which isn't installed dpkg: warning: ignoring request to remove libyaml-perl which isn't installed dpkg: warning: ignoring request to remove libyuv0 which isn't installed dpkg: warning: ignoring request to remove libz3-4 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed dpkg: warning: ignoring request to remove linux-sysctl-defaults which isn't installed Purging configuration files for luit (2.0.20240910-1) ... Purging configuration files for lynx (2.9.2-1) ... Purging configuration files for lynx-common (2.9.2-1) ... dpkg: warning: ignoring request to remove mafft which isn't installed Purging configuration files for mailcap (3.74) ... dpkg: warning: ignoring request to remove make which isn't installed dpkg: warning: ignoring request to remove manpages which isn't installed dpkg: warning: ignoring request to remove manpages-dev which isn't installed dpkg: warning: ignoring request to remove maq which isn't installed Purging configuration files for mariadb-common (1:11.4.3-1) ... Purging configuration files for med-config (3.8.1) ... Purging configuration files for media-types (10.1.0) ... Purging configuration files for menu (2.1.50) ... dpkg: warning: ignoring request to remove mesa-libgallium which isn't installed dpkg: warning: ignoring request to remove mesa-vulkan-drivers which isn't installed dpkg: warning: ignoring request to remove mummer which isn't installed dpkg: warning: ignoring request to remove muscle which isn't installed dpkg: warning: ignoring request to remove mustang which isn't installed Purging configuration files for mysql-common (5.8+1.1.1) ... dpkg: warning: ignoring request to remove ncbi-blast+ which isn't installed dpkg: warning: ignoring request to remove ncbi-blast+-legacy which isn't installed Purging configuration files for ncbi-data (6.1.20170106+dfsg2-5) ... dpkg: warning: ignoring request to remove ncoils which isn't installed Purging configuration files for netbase (6.4) ... dpkg: warning: ignoring request to remove openjdk-21-jdk-headless which isn't installed dpkg: warning: ignoring request to remove openjdk-21-jre which isn't installed Purging configuration files for openjdk-21-jre-headless:amd64 (21.0.5+11-1) ... Purging configuration files for openssl (3.3.2-2) ... dpkg: warning: ignoring request to remove pal2nal which isn't installed dpkg: warning: ignoring request to remove paml which isn't installed dpkg: warning: ignoring request to remove patch which isn't installed Purging configuration files for perl (5.40.0-8) ... Purging configuration files for perl-doc (5.40.0-8) ... dpkg: warning: ignoring request to remove perl-modules-5.40 which isn't installed dpkg: warning: ignoring request to remove perl-openssl-defaults which isn't installed dpkg: warning: ignoring request to remove perl-tk which isn't installed dpkg: warning: ignoring request to remove phylip which isn't installed dpkg: warning: ignoring request to remove pinentry-curses which isn't installed Purging configuration files for pkgconf:amd64 (1.8.1-4) ... dpkg: warning: ignoring request to remove pkgconf-bin which isn't installed dpkg: warning: ignoring request to remove poa which isn't installed Purging configuration files for poppler-data (0.4.12-1) ... dpkg: warning: ignoring request to remove prank which isn't installed Purging configuration files for primer3 (2.6.1-5) ... dpkg: warning: ignoring request to remove probalign which isn't installed dpkg: warning: ignoring request to remove probcons which isn't installed Purging configuration files for procps (2:4.0.4-6) ... dpkg: warning: ignoring request to remove proda which isn't installed dpkg: warning: ignoring request to remove proj-bin which isn't installed dpkg: warning: ignoring request to remove proj-data which isn't installed dpkg: warning: ignoring request to remove psmisc which isn't installed dpkg: warning: ignoring request to remove publicsuffix which isn't installed Purging configuration files for python-matplotlib-data (3.8.3-3) ... Purging configuration files for python3 (3.12.6-1) ... dpkg: warning: ignoring request to remove python3-appdirs which isn't installed dpkg: warning: ignoring request to remove python3-attr which isn't installed dpkg: warning: ignoring request to remove python3-autocommand which isn't installed dpkg: warning: ignoring request to remove python3-brotli which isn't installed dpkg: warning: ignoring request to remove python3-bs4 which isn't installed dpkg: warning: ignoring request to remove python3-chardet which isn't installed dpkg: warning: ignoring request to remove python3-contourpy which isn't installed dpkg: warning: ignoring request to remove python3-cssselect which isn't installed dpkg: warning: ignoring request to remove python3-cycler which isn't installed dpkg: warning: ignoring request to remove python3-dateutil which isn't installed dpkg: warning: ignoring request to remove python3-decorator which isn't installed dpkg: warning: ignoring request to remove python3-fonttools which isn't installed dpkg: warning: ignoring request to remove python3-fs which isn't installed dpkg: warning: ignoring request to remove python3-gdal which isn't installed dpkg: warning: ignoring request to remove python3-html5lib which isn't installed dpkg: warning: ignoring request to remove python3-inflect which isn't installed dpkg: warning: ignoring request to remove python3-jaraco.context which isn't installed dpkg: warning: ignoring request to remove python3-jaraco.functools which isn't installed dpkg: warning: ignoring request to remove python3-kiwisolver which isn't installed dpkg: warning: ignoring request to remove python3-lxml which isn't installed dpkg: warning: ignoring request to remove python3-lz4 which isn't installed dpkg: warning: ignoring request to remove python3-matplotlib which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-more-itertools which isn't installed dpkg: warning: ignoring request to remove python3-mpmath which isn't installed dpkg: warning: ignoring request to remove python3-networkx which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-olefile which isn't installed dpkg: warning: ignoring request to remove python3-packaging which isn't installed dpkg: warning: ignoring request to remove python3-pil which isn't installed dpkg: warning: ignoring request to remove python3-pil.imagetk which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-pydot which isn't installed dpkg: warning: ignoring request to remove python3-pygraphviz which isn't installed dpkg: warning: ignoring request to remove python3-pyparsing which isn't installed dpkg: warning: ignoring request to remove python3-pysam which isn't installed dpkg: warning: ignoring request to remove python3-scipy which isn't installed dpkg: warning: ignoring request to remove python3-soupsieve which isn't installed Purging configuration files for python3-sympy (1.13.3-1) ... dpkg: warning: ignoring request to remove python3-tk which isn't installed dpkg: warning: ignoring request to remove python3-typeguard which isn't installed dpkg: warning: ignoring request to remove python3-typing-extensions which isn't installed dpkg: warning: ignoring request to remove python3-tz which isn't installed dpkg: warning: ignoring request to remove python3-ufolib2 which isn't installed dpkg: warning: ignoring request to remove python3-unicodedata2 which isn't installed dpkg: warning: ignoring request to remove python3-webencodings which isn't installed dpkg: warning: ignoring request to remove python3-yaml which isn't installed dpkg: warning: ignoring request to remove python3.12 which isn't installed Purging configuration files for python3.12-minimal (3.12.8-1) ... dpkg: warning: ignoring request to remove python3.12-tk which isn't installed dpkg: warning: ignoring request to remove python3.13-tk which isn't installed Purging configuration files for r-base-core (4.4.2-1) ... dpkg: warning: ignoring request to remove r-base-dev which isn't installed dpkg: warning: ignoring request to remove r-cran-boot which isn't installed dpkg: warning: ignoring request to remove r-cran-class which isn't installed dpkg: warning: ignoring request to remove r-cran-cluster which isn't installed dpkg: warning: ignoring request to remove r-cran-codetools which isn't installed dpkg: warning: ignoring request to remove r-cran-foreign which isn't installed dpkg: warning: ignoring request to remove r-cran-kernsmooth which isn't installed dpkg: warning: ignoring request to remove r-cran-lattice which isn't installed dpkg: warning: ignoring request to remove r-cran-mass which isn't installed dpkg: warning: ignoring request to remove r-cran-matrix which isn't installed dpkg: warning: ignoring request to remove r-cran-mgcv which isn't installed dpkg: warning: ignoring request to remove r-cran-nlme which isn't installed dpkg: warning: ignoring request to remove r-cran-nnet which isn't installed dpkg: warning: ignoring request to remove r-cran-rpart which isn't installed dpkg: warning: ignoring request to remove r-cran-spatial which isn't installed dpkg: warning: ignoring request to remove r-cran-survival which isn't installed dpkg: warning: ignoring request to remove r-doc-html which isn't installed dpkg: warning: ignoring request to remove r-recommended which isn't installed dpkg: warning: ignoring request to remove rake which isn't installed dpkg: warning: ignoring request to remove raxml which isn't installed Purging configuration files for readline-common (8.2-5) ... dpkg: warning: ignoring request to remove rpcsvc-proto which isn't installed dpkg: warning: ignoring request to remove ruby which isn't installed dpkg: warning: ignoring request to remove ruby-net-telnet which isn't installed dpkg: warning: ignoring request to remove ruby-rubygems which isn't installed dpkg: warning: ignoring request to remove ruby-sdbm which isn't installed dpkg: warning: ignoring request to remove ruby-webrick which isn't installed dpkg: warning: ignoring request to remove ruby-xmlrpc which isn't installed dpkg: warning: ignoring request to remove ruby3.1 which isn't installed dpkg: warning: ignoring request to remove rubygems-integration which isn't installed dpkg: warning: ignoring request to remove samtools which isn't installed dpkg: warning: ignoring request to remove sensible-utils which isn't installed Purging configuration files for shared-mime-info (2.4-5+b1) ... dpkg: warning: ignoring request to remove sim4 which isn't installed dpkg: warning: ignoring request to remove smalt which isn't installed Purging configuration files for systemd (257~rc3-1) ... dpkg: warning: ignoring request to remove systemd-cryptsetup which isn't installed dpkg: warning: ignoring request to remove systemd-sysv which isn't installed Purging configuration files for systemd-timesyncd (257~rc3-1) ... dpkg: warning: ignoring request to remove t-coffee which isn't installed dpkg: warning: ignoring request to remove tk8.6-blt2.5 which isn't installed dpkg: warning: ignoring request to remove tm-align which isn't installed dpkg: warning: ignoring request to remove trimmomatic which isn't installed Purging configuration files for ucf (3.0045) ... dpkg: warning: ignoring request to remove unicode-data which isn't installed Purging configuration files for unixodbc-common (2.3.12-1) ... Purging configuration files for unzip (6.0-28) ... dpkg: warning: ignoring request to remove wise which isn't installed dpkg: warning: ignoring request to remove wise-data which isn't installed Purging configuration files for x11-common (1:7.7+23.1) ... Purging configuration files for x11-utils (7.7+7) ... Purging configuration files for x11-xserver-utils (7.7+10+b1) ... dpkg: warning: ignoring request to remove xauth which isn't installed Purging configuration files for xdg-user-dirs (0.18-1) ... dpkg: warning: ignoring request to remove xdg-utils which isn't installed dpkg: warning: ignoring request to remove xfonts-encodings which isn't installed Purging configuration files for xfonts-utils (1:7.7+7) ... dpkg: warning: ignoring request to remove xkb-data which isn't installed dpkg: warning: ignoring request to remove xz-utils which isn't installed dpkg: warning: ignoring request to remove zip which isn't installed dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed dpkg: warning: ignoring request to remove zutty which isn't installed 3m19.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg', '--purge', 'adduser', 'adwaita-icon-theme', 'alsa-topology-conf', 'alsa-ucm-conf', 'amap-align', 'apache2-bin', 'at-spi2-common', 'at-spi2-core', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bioperl', 'bioperl-run', 'blends-common', 'blt', 'build-essential', 'bwa', 'bzip2', 'bzip2-doc', 'ca-certificates', 'ca-certificates-java', 'clustalo', 'clustalw', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jdk-headless', 'default-jre', 'default-jre-headless', 'dialign-tx', 'dialign-tx-data', 'dirmngr', 'dmsetup', 'dpkg-dev', 'exonerate', 'fakeroot', 'fastaq', 'file', 'fontconfig', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-droid-fallback', 'fonts-lato', 'fonts-liberation', 'fonts-liberation-sans-narrow', 'fonts-lyx', 'fonts-noto-mono', 'fonts-urw-base35', 'fsa', 'g++', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gawk', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'gdal-data', 'gdal-plugins:amd64', 'gfortran', 'gfortran-14', 'gfortran-14-x86-64-linux-gnu', 'gfortran-x86-64-linux-gnu', 'ghostscript', 'gnupg', 'gnupg-l10n', 'gnupg-utils', 'gpg', 'gpg-agent', 'gpg-wks-client', 'gpgconf', 'gpgsm', 'graphviz', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hicolor-icon-theme', 'icu-devtools', 'isympy-common', 'isympy3', 'java-common', 'javascript-common', 'kalign', 'kmc', 'krb5-locales', 'lagan', 'libabsl20230802:amd64', 'libace-perl', 'libaec0:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl:amd64', 'libalgorithm-merge-perl', 'libalgorithm-munkres-perl', 'libann0', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache2-mod-perl2', 'libapache2-reload-perl', 'libapparmor1:amd64', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libargtable2-0', 'libarmadillo14', 'libarpack2t64:amd64', 'libarray-compare-perl', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libassuan9:amd64', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libauthen-sasl-perl', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavif16:amd64', 'libb-hooks-endofscope-perl', 'libb-hooks-op-check-perl:amd64', 'libbambamc0:amd64', 'libbinutils:amd64', 'libbio-asn1-entrezgene-perl', 'libbio-cluster-perl', 'libbio-eutilities-perl', 'libbio-featureio-perl', 'libbio-perl-perl', 'libbio-perl-run-perl', 'libbio-tools-run-remoteblast-perl', 'libbio-variation-perl', 'libbit-vector-perl:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libbrotli1:amd64', 'libbsd-resource-perl', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcache-cache-perl', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcapture-tiny-perl', 'libcarp-clan-perl', 'libcc1-0:amd64', 'libcdt5:amd64', 'libcfitsio10t64:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcgraph6:amd64', 'libclass-data-inheritable-perl', 'libclass-inspector-perl', 'libclass-method-modifiers-perl', 'libclass-xsaccessor-perl', 'libclone-perl:amd64', 'libcloudproviders0:amd64', 'libcolord2:amd64', 'libconvert-binary-c-perl', 'libconvert-binhex-perl', 'libcrypt-dev:amd64', 'libcrypt-rc4-perl', 'libcryptsetup12:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdata-dump-perl', 'libdata-stag-perl', 'libdate-calc-perl', 'libdate-calc-xs-perl:amd64', 'libdate-manip-perl', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbd-mysql-perl:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate-dev:amd64', 'libdeflate0:amd64', 'libdevel-callchecker-perl:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libdevmapper1.02.1:amd64', 'libdigest-perl-md5-perl', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdynaloader-functions-perl', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1t64:amd64', 'libencode-locale-perl', 'libepoxy0:amd64', 'liberror-perl', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfakeroot:amd64', 'libfcgi-bin', 'libfcgi-perl', 'libfcgi0t64:amd64', 'libfile-basedir-perl', 'libfile-desktopentry-perl', 'libfile-fcntllock-perl', 'libfile-listing-perl', 'libfile-mimeinfo-perl', 'libfile-slurp-tiny-perl', 'libfile-sort-perl', 'libfont-afm-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfreezethaw-perl', 'libfribidi0:amd64', 'libfyba0t64:amd64', 'libgav1-1:amd64', 'libgbm1:amd64', 'libgcc-14-dev:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdal35:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-bin', 'libgdk-pixbuf2.0-common', 'libgeos-c1t64:amd64', 'libgeos3.13.0:amd64', 'libgeotiff5:amd64', 'libgfortran-14-dev:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libgles2:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgomp1:amd64', 'libgpgme11t64:amd64', 'libgpgmepp6t64:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraph-perl', 'libgraphite2-3:amd64', 'libgraphviz-perl', 'libgs-common', 'libgs10:amd64', 'libgs10-common', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgts-0.7-5t64:amd64', 'libgts-bin', 'libgvc6', 'libgvpr2:amd64', 'libharfbuzz0b:amd64', 'libhdf4-0-alt:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libheap-perl', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhtml-form-perl', 'libhtml-format-perl', 'libhtml-parser-perl:amd64', 'libhtml-tableextract-perl', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libhwasan0:amd64', 'libice6:amd64', 'libicu-dev:amd64', 'libicu72:amd64', 'libidn12:amd64', 'libijs-0.35:amd64', 'libimagequant0:amd64', 'libimport-into-perl', 'libio-compress-brotli-perl', 'libio-html-perl', 'libio-pty-perl', 'libio-sessiondata-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libio-stringy-perl', 'libipc-run-perl', 'libipc-sharelite-perl', 'libipc-system-simple-perl', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjbig2dec0:amd64', 'libjbzip2-java', 'libjcode-pm-perl', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libjson-c5:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1t64:amd64', 'libkmldom1t64:amd64', 'libkmlengine1t64:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libksba8:amd64', 'liblab-gamut1:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'libllvm19:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'liblzma-dev:amd64', 'libmagic-mgc', 'libmagic1t64:amd64', 'libmailtools-perl', 'libmariadb3:amd64', 'libmath-derivative-perl', 'libmath-spline-perl', 'libmbedcrypto16:amd64', 'libmbedtls21:amd64', 'libmbedx509-7:amd64', 'libmime-tools-perl', 'libminizip1t64:amd64', 'libmldbm-perl', 'libmodule-implementation-perl', 'libmodule-runtime-perl', 'libmoo-perl', 'libmpc3:amd64', 'libmpfr6:amd64', 'libnamespace-clean-perl', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnet-dbus-perl', 'libnet-http-perl', 'libnet-smtp-ssl-perl', 'libnet-ssleay-perl:amd64', 'libnetcdf19t64:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnpth0t64:amd64', 'libnsl2:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libodbc2:amd64', 'libodbcinst2:amd64', 'libogdi4.1:amd64', 'libole-storage-lite-perl', 'libopenjp2-7:amd64', 'libpackage-stash-perl', 'libpackage-stash-xs-perl:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libparams-classify-perl:amd64', 'libparse-recdescent-perl', 'libpathplan4:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpcre2-32-0:amd64', 'libpcre2-dev:amd64', 'libpcre2-posix3:amd64', 'libpcsclite1:amd64', 'libperl5.40:amd64', 'libpixman-1-0:amd64', 'libpkgconf3:amd64', 'libpng-dev:amd64', 'libpng-tools', 'libpng16-16t64:amd64', 'libpoppler140:amd64', 'libpostscript-perl', 'libpq5:amd64', 'libproc2-0:amd64', 'libproj25:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'librav1e0.7:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'libreadonly-perl', 'libref-util-perl', 'libref-util-xs-perl', 'librole-tiny-perl', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'librtmp1:amd64', 'librttopo1:amd64', 'libruby:amd64', 'libruby3.1t64:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libset-object-perl', 'libset-scalar-perl', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libsigsegv2:amd64', 'libsm6:amd64', 'libsnappy1v5:amd64', 'libsoap-lite-perl', 'libsort-naturally-perl', 'libspatialite8t64:amd64', 'libspreadsheet-parseexcel-perl', 'libspreadsheet-writeexcel-perl', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstatistics-descriptive-perl', 'libstdc++-14-dev:amd64', 'libsub-exporter-progressive-perl', 'libsub-identify-perl', 'libsub-name-perl:amd64', 'libsub-quote-perl', 'libsub-uplevel-perl', 'libsvg-graph-perl', 'libsvg-perl', 'libsvtav1enc2:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libtask-weaken-perl', 'libtcl8.6:amd64', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-requiresinternet-perl', 'libtest-warn-perl', 'libtext-csv-perl', 'libtext-csv-xs-perl:amd64', 'libtext-diff-perl', 'libtext-iconv-perl:amd64', 'libthai-data', 'libthai0:amd64', 'libtie-ixhash-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtree-dagnode-perl', 'libtry-tiny-perl', 'libtsan2:amd64', 'libtype-tiny-perl', 'libtype-tiny-xs-perl:amd64', 'libubsan1:amd64', 'libunicode-map-perl', 'liburi-perl', 'liburiparser1:amd64', 'libuv1t64:amd64', 'libvariable-magic-perl', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx11-protocol-perl', 'libx11-xcb1:amd64', 'libx265-209:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces-c3.2t64:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-dom-perl', 'libxml-dom-xpath-perl', 'libxml-filter-buffertext-perl', 'libxml-libxml-perl', 'libxml-libxslt-perl:amd64', 'libxml-namespacesupport-perl', 'libxml-parser-perl', 'libxml-perl', 'libxml-regexp-perl', 'libxml-sax-base-perl', 'libxml-sax-expat-perl', 'libxml-sax-perl', 'libxml-sax-writer-perl', 'libxml-simple-perl', 'libxml-twig-perl', 'libxml-writer-perl', 'libxml-xpath-perl', 'libxml-xpathengine-perl', 'libxml2:amd64', 'libxmlrpc-lite-perl', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxstring-perl:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyaml-libyaml-perl', 'libyaml-perl', 'libyuv0:amd64', 'libz3-4:amd64', 'linux-libc-dev', 'linux-sysctl-defaults', 'luit', 'lynx', 'lynx-common', 'mafft', 'mailcap', 'make', 'manpages', 'manpages-dev', 'maq', 'mariadb-common', 'med-config', 'media-types', 'menu', 'mesa-libgallium:amd64', 'mesa-vulkan-drivers:amd64', 'mummer', 'muscle', 'mustang', 'mysql-common', 'ncbi-blast+', 'ncbi-blast+-legacy', 'ncbi-data', 'ncoils', 'netbase', 'openjdk-21-jdk-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openssl', 'pal2nal', 'paml', 'patch', 'perl', 'perl-doc', 'perl-modules-5.40', 'perl-openssl-defaults:amd64', 'perl-tk', 'phylip', 'pinentry-curses', 'pkgconf:amd64', 'pkgconf-bin', 'poa', 'poppler-data', 'prank', 'primer3', 'probalign', 'probcons', 'procps', 'proda', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python-matplotlib-data', 'python3', 'python3-appdirs', 'python3-attr', 'python3-autocommand', 'python3-brotli', 'python3-bs4', 'python3-chardet', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-fonttools', 'python3-fs', 'python3-gdal', 'python3-html5lib', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-matplotlib', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-networkx', 'python3-numpy', 'python3-olefile', 'python3-packaging', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-pydot', 'python3-pygraphviz', 'python3-pyparsing', 'python3-pysam', 'python3-scipy', 'python3-soupsieve', 'python3-sympy', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-unicodedata2', 'python3-webencodings', 'python3-yaml', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'r-base-core', 'r-base-dev', 'r-cran-boot', 'r-cran-class', 'r-cran-cluster', 'r-cran-codetools', 'r-cran-foreign', 'r-cran-kernsmooth', 'r-cran-lattice', 'r-cran-mass', 'r-cran-matrix', 'r-cran-mgcv', 'r-cran-nlme', 'r-cran-nnet', 'r-cran-rpart', 'r-cran-spatial', 'r-cran-survival', 'r-doc-html', 'r-recommended', 'rake', 'raxml', 'readline-common', 'rpcsvc-proto', 'ruby', 'ruby-net-telnet', 'ruby-rubygems', 'ruby-sdbm:amd64', 'ruby-webrick', 'ruby-xmlrpc', 'ruby3.1', 'rubygems-integration', 'samtools', 'sensible-utils', 'shared-mime-info', 'sim4', 'smalt', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 't-coffee', 'tk8.6-blt2.5', 'tm-align', 'trimmomatic', 'ucf', 'unicode-data', 'unixodbc-common', 'unzip', 'wise', 'wise-data', 'x11-common', 'x11-utils', 'x11-xserver-utils', 'xauth', 'xdg-user-dirs', 'xdg-utils', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'zutty'] 3m19.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg', '--purge', 'iva'] 3m19.0s DUMP: dpkg: warning: ignoring request to remove iva which isn't installed 3m19.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg', '--purge', 'iva'] 3m19.0s INFO: Running scripts post_purge 3m19.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_purge_exceptions'] 3m19.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_purge_exceptions'] 3m19.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg', '--purge', '--pending'] 3m19.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg', '--purge', '--pending'] 3m19.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg', '--remove', '--pending'] 3m19.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg', '--remove', '--pending'] 3m19.0s INFO: Running scripts post_test 3m19.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_test_exceptions'] 3m19.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'tmp/scripts/post_test_exceptions'] 3m19.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 3m19.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 3m20.3s ERROR: WARN: Broken symlinks: /etc/vconsole.conf -> default/keyboard /etc/fonts/conf.d/70-no-bitmaps-except-emoji.conf -> /usr/share/fontconfig/conf.avail/70-no-bitmaps-except-emoji.conf /etc/default/locale -> ../locale.conf 3m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg-divert', '--list'] 3m20.3s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 3m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'dpkg-divert', '--list'] 3m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', 'clean'] 3m20.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh', 'apt-get', 'clean'] 3m20.5s DEBUG: Recording chroot state 3m21.2s INFO: Warning: Package purging left files on system: /etc/default/locale -> ../locale.conf not owned /etc/fonts/ owned by: fonts-noto-mono, fonts-droid-fallback, fontconfig-config, fonts-urw-base35, fonts-dejavu-core, fonts-dejavu-mono /etc/fonts/conf.d/ owned by: fontconfig-config, fonts-urw-base35, fonts-dejavu-core, fonts-dejavu-mono /etc/fonts/conf.d/70-no-bitmaps-except-emoji.conf -> /usr/share/fontconfig/conf.avail/70-no-bitmaps-except-emoji.conf not owned /etc/vconsole.conf -> default/keyboard not owned /root/.ssh/ not owned /var/cache/private/ not owned /var/lib/private/ not owned /var/log/private/ not owned 3m21.2s INFO: PASS: Installation and purging test. 3m21.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/shm'] 3m21.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/shm'] 3m21.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/console'] 3m21.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/console'] 3m21.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/ptmx'] 3m21.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/ptmx'] 3m21.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/pts'] 3m21.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/dev/pts'] 3m21.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/proc'] 3m21.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh/proc'] 3m21.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 3m21.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpt74ftwqh'] 3m21.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpt74ftwqh 3m21.9s INFO: PASS: All tests. 3m21.9s INFO: piuparts run ends. ret=0 End: 2024-12-10 02:46:04 GMT