Start: 2024-10-12 09:17:27 GMT Package: libsnpsift-java-doc Source: snpsift Version: 5.2.e+dfsg-1 Installed-Size: 6503 Maintainer: Debian Med Packaging Team Architecture: all Recommends: antlr4-doc, default-jdk-doc, libcommons-math3-java-doc, libhtsjdk-java-doc, libsnpeff-java-doc, libtrove3-java-doc Suggests: libsnpsift-java Description: Documentation for SnpSift Multi-Arch: foreign Homepage: https://pcingola.github.io/SnpEff/ss_introduction/ Description-md5: c7d947955989ab8aadb329702d4ec0e1 Section: doc Priority: optional Filename: pool/main/s/snpsift/libsnpsift-java-doc_5.2.e+dfsg-1_all.deb Size: 239072 MD5sum: 737556c9e1ccbf15dc4c47f90eab16d3 SHA256: dd5de2c1d00a99dca32eea8780ea1a6f12a5009b09007b48a0edc7fc80b0a79a Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt libsnpsift-java-doc=5.2.e+dfsg-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.5~202409272043~1.4.4-4-gf0f1b5e8 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt libsnpsift-java-doc=5.2.e+dfsg-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-33-amd64 #1 SMP Debian 5.10.226-1 (2024-10-03) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpsglc511n 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpsglc511n 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpsglc511n', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpsglc511n', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpsglc511n/proc'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpsglc511n/proc'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/pts'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/pts'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/ptmx'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/ptmx'] 0m0.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/6', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/console'] 0m0.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/6', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/console'] 0m0.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/shm'] 0m0.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/shm'] 0m0.5s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.5s DEBUG: Created policy-rc.d and chmodded it. 0m0.5s DEBUG: Created resolv.conf. 0m0.5s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpsglc511n/tmp/scripts/ 0m0.5s INFO: Running scripts post_chroot_unpack 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', 'update'] 0m3.6s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [169 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9331 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6222 kB] Fetched 15.7 MB in 2s (7680 kB/s) Reading package lists... 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', 'update'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', '-yf', 'dist-upgrade'] 0m5.6s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: bsdutils libblkid1 libmount1 libsmartcols1 libuuid1 login mount util-linux 8 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2098 kB of archives. After this operation, 8192 B of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 bsdutils amd64 1:2.40.2-9 [105 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libuuid1 amd64 2.40.2-9 [35.6 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libblkid1 amd64 2.40.2-9 [168 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libmount1 amd64 2.40.2-9 [199 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libsmartcols1 amd64 2.40.2-9 [139 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 util-linux amd64 2.40.2-9 [1216 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 mount amd64 2.40.2-9 [154 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 login amd64 1:4.16.0-2+really2.40.2-9 [81.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2098 kB in 0s (35.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.40.2-9_amd64.deb ... Unpacking bsdutils (1:2.40.2-9) over (1:2.40.2-8) ... Setting up bsdutils (1:2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libuuid1_2.40.2-9_amd64.deb ... Unpacking libuuid1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libuuid1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libblkid1_2.40.2-9_amd64.deb ... Unpacking libblkid1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libblkid1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libmount1_2.40.2-9_amd64.deb ... Unpacking libmount1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libmount1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../libsmartcols1_2.40.2-9_amd64.deb ... Unpacking libsmartcols1:amd64 (2.40.2-9) over (2.40.2-8) ... Setting up libsmartcols1:amd64 (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../util-linux_2.40.2-9_amd64.deb ... Unpacking util-linux (2.40.2-9) over (2.40.2-8) ... Setting up util-linux (2.40.2-9) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5141 files and directories currently installed.) Preparing to unpack .../mount_2.40.2-9_amd64.deb ... Unpacking mount (2.40.2-9) over (2.40.2-8) ... Preparing to unpack .../login_1%3a4.16.0-2+really2.40.2-9_amd64.deb ... Unpacking login (1:4.16.0-2+really2.40.2-9) over (1:4.16.0-2+really2.40.2-8) ... Setting up mount (2.40.2-9) ... Setting up login (1:4.16.0-2+really2.40.2-9) ... Processing triggers for libc-bin (2.40-3) ... 0m5.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', '-yf', 'dist-upgrade'] 0m5.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.1s DUMP: 84c958a02ab8d018aeb50eb9b4571f7b - 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m6.1s INFO: Running scripts post_setup 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_dummy_users'] 0m7.0s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_dummy_users'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_forbid_home'] 0m7.0s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_forbid_home'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.0s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_force-unsafe-io'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_minimize'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_minimize'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_squeeze-backports'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_zz_backports'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_setup_zz_backports'] 0m7.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', 'clean'] 0m7.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', 'clean'] 0m7.0s DEBUG: Recording chroot state 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DUMP: install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-3 install ok installed gpgv gpgv 2.2.43-8+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 256.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.6-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg-divert', '--list'] 0m7.7s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg-divert', '--list'] 0m7.7s INFO: Running scripts is_testable 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/is_testable_uninstallable'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/is_testable_uninstallable'] 0m7.7s INFO: apt-cache does not know about any of the requested packages 0m7.7s INFO: Running scripts pre_test 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_test_exceptions'] 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_test_exceptions'] 0m7.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_test_root_password'] 0m7.7s DUMP: New password: Retype new password: passwd: password updated successfully 0m7.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_test_root_password'] 0m7.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m8.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m8.9s DEBUG: No broken symlinks as far as we can find. 0m8.9s INFO: Running scripts pre_install 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_database-server'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_database-server'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_exceptions'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_exceptions'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_extras'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_extras'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m9.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m10.2s DEBUG: No broken symlinks as far as we can find. 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-cache', 'policy'] 0m11.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-cache', 'policy'] 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-cache', 'policy', 'libsnpsift-java-doc'] 0m11.2s DUMP: libsnpsift-java-doc: Installed: (none) Candidate: 5.2.e+dfsg-1 Version table: 5.2.e+dfsg-1 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-cache', 'policy', 'libsnpsift-java-doc'] 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', '-y', 'install', 'libsnpsift-java-doc=5.2.e+dfsg-1'] 0m18.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: antlr4-doc default-jdk-doc fonts-mathjax javascript-common libbiojava6-java-doc libcommons-math3-java-doc libhtsjdk-java-doc libjs-jquery libjs-jquery-ui libjs-jquery-ui-theme-base libjs-mathjax libsnpeff-java-doc libtrove3-java-doc openjdk-21-doc Suggested packages: libantlr4-runtime-java default-jdk apache2 | lighttpd | httpd libbiojava6-java libcommons-math3-java libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc libsnpeff-java libsnpsift-java libtrove3-java openjdk-21-jdk The following NEW packages will be installed: antlr4-doc default-jdk-doc fonts-mathjax javascript-common libbiojava6-java-doc libcommons-math3-java-doc libhtsjdk-java-doc libjs-jquery libjs-jquery-ui libjs-jquery-ui-theme-base libjs-mathjax libsnpeff-java-doc libsnpsift-java-doc libtrove3-java-doc openjdk-21-doc 0 upgraded, 15 newly installed, 0 to remove and 0 not upgraded. Need to get 29.1 MB of archives. After this operation, 566 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui-theme-base all 1.12.1+dfsg-1.1 [44.3 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 openjdk-21-doc all 21.0.5~8ea-1 [13.2 MB] Get:5 http://deb.debian.org/debian trixie/main amd64 default-jdk-doc amd64 2:1.21-76 [3264 B] Get:6 http://deb.debian.org/debian trixie/main amd64 antlr4-doc all 4.9.2-2 [852 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 javascript-common all 11+nmu1 [6260 B] Get:9 http://deb.debian.org/debian trixie/main amd64 libbiojava6-java-doc all 6.1.0+dfsg-4 [2241 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libcommons-math3-java-doc all 3.6.1-3 [1560 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libhtsjdk-java-doc all 4.1.0+dfsg-2 [1044 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 libsnpeff-java-doc all 5.2.e+dfsg-1 [668 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libsnpsift-java-doc all 5.2.e+dfsg-1 [239 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 libtrove3-java-doc all 3.0.3-5 [823 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 29.1 MB in 0s (60.7 MB/s) Selecting previously unselected package libjs-jquery. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5145 files and directories currently installed.) Preparing to unpack .../00-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-jquery-ui. Preparing to unpack .../01-libjs-jquery-ui_1.13.2+dfsg-1_all.deb ... Unpacking libjs-jquery-ui (1.13.2+dfsg-1) ... Selecting previously unselected package libjs-jquery-ui-theme-base. Preparing to unpack .../02-libjs-jquery-ui-theme-base_1.12.1+dfsg-1.1_all.deb ... Unpacking libjs-jquery-ui-theme-base (1.12.1+dfsg-1.1) ... Selecting previously unselected package openjdk-21-doc. Preparing to unpack .../03-openjdk-21-doc_21.0.5~8ea-1_all.deb ... Unpacking openjdk-21-doc (21.0.5~8ea-1) ... Selecting previously unselected package default-jdk-doc. Preparing to unpack .../04-default-jdk-doc_2%3a1.21-76_amd64.deb ... Unpacking default-jdk-doc (2:1.21-76) ... Selecting previously unselected package antlr4-doc. Preparing to unpack .../05-antlr4-doc_4.9.2-2_all.deb ... Unpacking antlr4-doc (4.9.2-2) ... Selecting previously unselected package fonts-mathjax. Preparing to unpack .../06-fonts-mathjax_2.7.9+dfsg-1_all.deb ... Unpacking fonts-mathjax (2.7.9+dfsg-1) ... Selecting previously unselected package javascript-common. Preparing to unpack .../07-javascript-common_11+nmu1_all.deb ... Unpacking javascript-common (11+nmu1) ... Selecting previously unselected package libbiojava6-java-doc. Preparing to unpack .../08-libbiojava6-java-doc_6.1.0+dfsg-4_all.deb ... Unpacking libbiojava6-java-doc (6.1.0+dfsg-4) ... Selecting previously unselected package libjs-mathjax. Preparing to unpack .../09-libjs-mathjax_2.7.9+dfsg-1_all.deb ... Unpacking libjs-mathjax (2.7.9+dfsg-1) ... Selecting previously unselected package libcommons-math3-java-doc. Preparing to unpack .../10-libcommons-math3-java-doc_3.6.1-3_all.deb ... Unpacking libcommons-math3-java-doc (3.6.1-3) ... Selecting previously unselected package libhtsjdk-java-doc. Preparing to unpack .../11-libhtsjdk-java-doc_4.1.0+dfsg-2_all.deb ... Unpacking libhtsjdk-java-doc (4.1.0+dfsg-2) ... Selecting previously unselected package libsnpeff-java-doc. Preparing to unpack .../12-libsnpeff-java-doc_5.2.e+dfsg-1_all.deb ... Unpacking libsnpeff-java-doc (5.2.e+dfsg-1) ... Selecting previously unselected package libsnpsift-java-doc. Preparing to unpack .../13-libsnpsift-java-doc_5.2.e+dfsg-1_all.deb ... Unpacking libsnpsift-java-doc (5.2.e+dfsg-1) ... Selecting previously unselected package libtrove3-java-doc. Preparing to unpack .../14-libtrove3-java-doc_3.0.3-5_all.deb ... Unpacking libtrove3-java-doc (3.0.3-5) ... Setting up libsnpsift-java-doc (5.2.e+dfsg-1) ... Setting up javascript-common (11+nmu1) ... Setting up fonts-mathjax (2.7.9+dfsg-1) ... Setting up libhtsjdk-java-doc (4.1.0+dfsg-2) ... Setting up libjs-mathjax (2.7.9+dfsg-1) ... Setting up libjs-jquery-ui-theme-base (1.12.1+dfsg-1.1) ... Setting up libcommons-math3-java-doc (3.6.1-3) ... Setting up libtrove3-java-doc (3.0.3-5) ... Setting up libsnpeff-java-doc (5.2.e+dfsg-1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up openjdk-21-doc (21.0.5~8ea-1) ... Setting up default-jdk-doc (2:1.21-76) ... Setting up antlr4-doc (4.9.2-2) ... Setting up libbiojava6-java-doc (6.1.0+dfsg-4) ... 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', '-y', 'install', 'libsnpsift-java-doc=5.2.e+dfsg-1'] 0m18.8s INFO: Running scripts post_install 0m18.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_install_exceptions'] 0m18.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_install_exceptions'] 0m18.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m20.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m24.6s DEBUG: No broken symlinks as far as we can find. 0m27.8s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpsglc511n', '-ac', '--ignore-obsolete'] 0m31.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpsglc511n', '-ac', '--ignore-obsolete'] 0m31.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m32.0s DUMP: 0.15.6 0m32.0s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m32.0s INFO: Running adequate version 0.15.6 now. 0m32.0s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'libsnpsift-java-doc'] 0m32.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'libsnpsift-java-doc'] 0m32.1s INFO: Running scripts pre_remove 0m32.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m32.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m32.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m32.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m32.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m33.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m33.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m33.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m33.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m33.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m33.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_exceptions'] 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/pre_remove_exceptions'] 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m33.9s DUMP: install ok installed antlr4-doc antlr4-doc 4.9.2-2 install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed bsdutils bsdutils 1:2.40.2-9 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed default-jdk-doc default-jdk-doc 2:1.21-76 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed fonts-mathjax fonts-mathjax 2.7.9+dfsg-1 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-3 install ok installed gpgv gpgv 2.2.43-8+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.67 install ok installed javascript-common javascript-common 11+nmu1 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libbiojava6-java-doc libbiojava6-java-doc 6.1.0+dfsg-4 install ok installed libblkid1:amd64 libblkid1 2.40.2-9 install ok installed libbsd0:amd64 libbsd0 0.12.2-2 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-3 install ok installed libc6:amd64 libc6 2.40-3 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcommons-math3-java-doc libcommons-math3-java-doc 3.6.1-3 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libhtsjdk-java-doc libhtsjdk-java-doc 4.1.0+dfsg-2 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libjs-jquery libjs-jquery 3.6.1+dfsg+~3.5.14-1 install ok installed libjs-jquery-ui libjs-jquery-ui 1.13.2+dfsg-1 install ok installed libjs-jquery-ui-theme-base libjs-jquery-ui-theme-base 1.12.1+dfsg-1.1 install ok installed libjs-mathjax libjs-mathjax 2.7.9+dfsg-1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-9 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-9 install ok installed libsnpeff-java-doc libsnpeff-java-doc 5.2.e+dfsg-1 install ok installed libsnpsift-java-doc libsnpsift-java-doc 5.2.e+dfsg-1 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 256.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libtrove3-java-doc libtrove3-java-doc 3.0.3-5 install ok installed libudev1:amd64 libudev1 256.6-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-9 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-9 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openjdk-21-doc openjdk-21-doc 21.0.5~8ea-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-9 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m33.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m33.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', 'remove', 'antlr4-doc', 'default-jdk-doc', 'fonts-mathjax', 'javascript-common', 'libbiojava6-java-doc', 'libcommons-math3-java-doc', 'libhtsjdk-java-doc', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-jquery-ui-theme-base', 'libjs-mathjax', 'libsnpeff-java-doc', 'libtrove3-java-doc', 'openjdk-21-doc', 'libsnpsift-java-doc'] 0m36.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: antlr4-doc default-jdk-doc fonts-mathjax javascript-common libbiojava6-java-doc libcommons-math3-java-doc libhtsjdk-java-doc libjs-jquery libjs-jquery-ui libjs-jquery-ui-theme-base libjs-mathjax libsnpeff-java-doc libsnpsift-java-doc libtrove3-java-doc openjdk-21-doc 0 upgraded, 0 newly installed, 15 to remove and 0 not upgraded. After this operation, 566 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 31900 files and directories currently installed.) Removing antlr4-doc (4.9.2-2) ... Removing libbiojava6-java-doc (6.1.0+dfsg-4) ... Removing default-jdk-doc (2:1.21-76) ... Removing libcommons-math3-java-doc (3.6.1-3) ... Removing libjs-mathjax (2.7.9+dfsg-1) ... Removing fonts-mathjax (2.7.9+dfsg-1) ... Removing javascript-common (11+nmu1) ... Removing libhtsjdk-java-doc (4.1.0+dfsg-2) ... Removing openjdk-21-doc (21.0.5~8ea-1) ... Removing libjs-jquery-ui (1.13.2+dfsg-1) ... Removing libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Removing libjs-jquery-ui-theme-base (1.12.1+dfsg-1.1) ... Removing libsnpeff-java-doc (5.2.e+dfsg-1) ... Removing libsnpsift-java-doc (5.2.e+dfsg-1) ... Removing libtrove3-java-doc (3.0.3-5) ... 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', 'remove', 'antlr4-doc', 'default-jdk-doc', 'fonts-mathjax', 'javascript-common', 'libbiojava6-java-doc', 'libcommons-math3-java-doc', 'libhtsjdk-java-doc', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-jquery-ui-theme-base', 'libjs-mathjax', 'libsnpeff-java-doc', 'libtrove3-java-doc', 'openjdk-21-doc', 'libsnpsift-java-doc'] 0m36.0s INFO: Running scripts post_remove 0m36.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_remove_exceptions'] 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_remove_exceptions'] 0m36.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg', '--purge', 'antlr4-doc', 'default-jdk-doc', 'fonts-mathjax', 'javascript-common', 'libbiojava6-java-doc', 'libcommons-math3-java-doc', 'libhtsjdk-java-doc', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-jquery-ui-theme-base', 'libjs-mathjax', 'libsnpeff-java-doc', 'libtrove3-java-doc', 'openjdk-21-doc'] 0m36.0s DUMP: dpkg: warning: ignoring request to remove antlr4-doc which isn't installed dpkg: warning: ignoring request to remove default-jdk-doc which isn't installed dpkg: warning: ignoring request to remove fonts-mathjax which isn't installed (Reading database ... 5151 files and directories currently installed.) Purging configuration files for javascript-common (11+nmu1) ... dpkg: warning: ignoring request to remove libbiojava6-java-doc which isn't installed dpkg: warning: ignoring request to remove libcommons-math3-java-doc which isn't installed dpkg: warning: ignoring request to remove libhtsjdk-java-doc which isn't installed Purging configuration files for libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... dpkg: warning: ignoring request to remove libjs-jquery-ui which isn't installed dpkg: warning: ignoring request to remove libjs-jquery-ui-theme-base which isn't installed dpkg: warning: ignoring request to remove libjs-mathjax which isn't installed dpkg: warning: ignoring request to remove libsnpeff-java-doc which isn't installed dpkg: warning: ignoring request to remove libtrove3-java-doc which isn't installed dpkg: warning: ignoring request to remove openjdk-21-doc which isn't installed 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg', '--purge', 'antlr4-doc', 'default-jdk-doc', 'fonts-mathjax', 'javascript-common', 'libbiojava6-java-doc', 'libcommons-math3-java-doc', 'libhtsjdk-java-doc', 'libjs-jquery', 'libjs-jquery-ui', 'libjs-jquery-ui-theme-base', 'libjs-mathjax', 'libsnpeff-java-doc', 'libtrove3-java-doc', 'openjdk-21-doc'] 0m36.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg', '--purge', 'libsnpsift-java-doc'] 0m36.0s DUMP: dpkg: warning: ignoring request to remove libsnpsift-java-doc which isn't installed 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg', '--purge', 'libsnpsift-java-doc'] 0m36.0s INFO: Running scripts post_purge 0m36.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_purge_exceptions'] 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_purge_exceptions'] 0m36.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg', '--purge', '--pending'] 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg', '--purge', '--pending'] 0m36.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg', '--remove', '--pending'] 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg', '--remove', '--pending'] 0m36.0s INFO: Running scripts post_test 0m36.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_test_exceptions'] 0m36.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'tmp/scripts/post_test_exceptions'] 0m36.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m36.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m37.2s DEBUG: No broken symlinks as far as we can find. 0m37.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg-divert', '--list'] 0m37.2s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m37.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'dpkg-divert', '--list'] 0m37.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', 'clean'] 0m37.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpsglc511n', 'apt-get', 'clean'] 0m37.2s DEBUG: Recording chroot state 0m38.0s INFO: PASS: Installation and purging test. 0m38.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/shm'] 0m38.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/shm'] 0m38.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/console'] 0m38.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/console'] 0m38.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/ptmx'] 0m38.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/ptmx'] 0m38.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/pts'] 0m38.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/dev/pts'] 0m38.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/proc'] 0m38.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpsglc511n/proc'] 0m38.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m38.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpsglc511n'] 0m38.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpsglc511n 0m38.7s INFO: PASS: All tests. 0m38.7s INFO: piuparts run ends. ret=0 End: 2024-10-12 09:18:06 GMT