Start: 2024-09-26 17:24:19 GMT Package: med-cloud Source: debian-med Version: 3.8.1 Installed-Size: 30 Maintainer: Debian Med Packaging Team Architecture: all Depends: med-config (= 3.8.1), med-tasks (= 3.8.1) Recommends: abyss, acedb-other, aevol, alien-hunter, altree, amap-align, ampliconnoise, aragorn, arden, autodock, autodock-vina, autogrid, bamtools, bedtools, bioperl, bioperl-run, biosquid, bowtie, bowtie2, boxshade, bwa, cassiopee, cd-hit, cdbfasta, circos, clearcut, clonalframe, clustalo, clustalw, concavity, conservation-code, datamash, dialign, dialign-tx, discosnp, disulfinder, dnaclust, dssp, embassy-domainatrix, embassy-domalign, embassy-domsearch, emboss, exonerate, fastdnaml, fastlink, fastqc, fasttree, fitgcp, flexbar, freecontact, gasic, genometools, gff2aplot, gff2ps, glam2, gmap, grinder, gromacs, hhsuite, hisat2, hmmer, idba, infernal, jellyfish, kalign, kissplice, last-align, loki, macs, mafft, mapsembler2, maq, melting, minia, mipe, mira-assembler, mlv-smile, mothur, mrbayes, mummer, muscle, muscle3, mustang, ncbi-epcr, ncbi-tools-bin, ncoils, neobio, paraclu, parsinsert, pdb2pqr, perm, phyml, phyutility, picard-tools, plink, plink1.9, plink2, poa, prank, prime-phylo, primer3, probabel, probcons, proda, prodigal, python3-biomaj3-cli, python3-biopython, python3-cogent3, qiime, r-bioc-edger, r-bioc-hilbertvis, r-cran-pvclust, r-cran-qtl, r-cran-vegan, r-other-mott-happy.hbrem, raster3d, readseq, rnahybrid, rtax, samtools, seqan-apps, sibsim4, sigma-align, sim4, smalt, snap, soapdenovo, soapdenovo2, squizz, sra-toolkit, ssake, staden-io-lib-utils, t-coffee, tabix, theseus, tigr-glimmer, tree-puzzle | tree-ppuzzle, vcftools, velvet, wise Suggests: anfo, bagpipe, blast2, cufflinks, embassy-phylip, giira Description: Debian Med bioinformatics applications usable in cloud computing Description-md5: 8580600ffc7b786c93529ecf82882c1a Tag: field::biology:molecular, role::metapackage Section: metapackages Priority: optional Filename: pool/main/d/debian-med/med-cloud_3.8.1_all.deb Size: 9840 MD5sum: cd5b1d3ef2659a4481274dc65928bfe2 SHA256: cbe22fd5cef1e60ee3bcd916e66c28f812a76e62ff459d8dfc2b897e4068e419 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt med-cloud=3.8.1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.4~202408201642~1.4.3-11-g36a88c35 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt med-cloud=3.8.1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-32-amd64 #1 SMP Debian 5.10.223-1 (2024-08-10) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp6t90phv8 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp6t90phv8 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/pts'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/pts'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/ptmx'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/ptmx'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/8', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/console'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/8', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/console'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/shm'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/shm'] 0m0.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.3s DEBUG: Created policy-rc.d and chmodded it. 0m0.3s DEBUG: Created resolv.conf. 0m0.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp6t90phv8/tmp/scripts/ 0m0.3s INFO: Running scripts post_chroot_unpack 0m0.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', 'update'] 0m3.2s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [169 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9306 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6204 kB] Fetched 15.7 MB in 2s (7003 kB/s) Reading package lists... 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', 'update'] 0m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', '-yf', 'dist-upgrade'] 0m3.7s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', '-yf', 'dist-upgrade'] 0m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.0s DUMP: bec90aa7353d877f59676e03e5d4af3a - 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.0s INFO: Running scripts post_setup 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_dummy_users'] 0m4.9s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_dummy_users'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_forbid_home'] 0m4.9s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_forbid_home'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.9s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_minimize'] 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_minimize'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_zz_backports'] 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_setup_zz_backports'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', 'clean'] 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', 'clean'] 0m5.0s DEBUG: Recording chroot state 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.7s DUMP: install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed bsdutils bsdutils 1:2.40.2-8 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-3 install ok installed gpgv gpgv 2.2.43-8+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libblkid1:amd64 libblkid1 2.40.2-8 install ok installed libbsd0:amd64 libbsd0 0.12.2-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-2 install ok installed libc6:amd64 libc6 2.40-2 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-8 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-8 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 256.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.6-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-8 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-8 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-8 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-8 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg-divert', '--list'] 0m5.7s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg-divert', '--list'] 0m5.7s INFO: Running scripts is_testable 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/is_testable_uninstallable'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/is_testable_uninstallable'] 0m5.7s INFO: apt-cache does not know about any of the requested packages 0m5.7s INFO: Running scripts pre_test 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_test_exceptions'] 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_test_exceptions'] 0m5.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_test_root_password'] 0m5.7s DUMP: New password: Retype new password: passwd: password updated successfully 0m5.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_test_root_password'] 0m5.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 0m6.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 0m6.5s DEBUG: No broken symlinks as far as we can find. 0m6.5s INFO: Running scripts pre_install 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_database-server'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_database-server'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_exceptions'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_exceptions'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_extras'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_extras'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 0m6.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 0m7.5s DEBUG: No broken symlinks as far as we can find. 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-cache', 'policy'] 0m8.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-cache', 'policy'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-cache', 'policy', 'med-cloud'] 0m8.6s DUMP: med-cloud: Installed: (none) Candidate: 3.8.1 Version table: 3.8.1 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m8.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-cache', 'policy', 'med-cloud'] 0m8.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', '-y', 'install', 'med-cloud=3.8.1'] 7m41.7s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: abyss adduser adwaita-icon-theme aevol alien-hunter alsa-topology-conf alsa-ucm-conf altree amap-align apache2-bin aragorn arden at-spi2-common at-spi2-core autodock autodock-vina autogrid bamtools bc bcalm bcftools bedtools binutils binutils-common binutils-x86-64-linux-gnu bioperl bioperl-run biosquid blends-common blt bowtie bowtie2 boxshade bsdextrautils build-essential bwa bzip2 bzip2-doc ca-certificates ca-certificates-java cassiopee cd-hit cdbfasta circos circos-tools clearcut clonalframe clustalo clustalw concavity conservation-code cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu datamash dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jdk-headless default-jre default-jre-headless dialign dialign-tx dialign-tx-data dictionaries-common dirmngr discosnp disulfinder disulfinder-data dmidecode dmsetup dnaclust docutils-common dpkg-dev dssp dvisvgm emacsen-common embassy-domainatrix embassy-domalign embassy-domsearch emboss emboss-data emboss-lib exonerate fakeroot fastdnaml fastlink fastqc fasttree file fitgcp flexbar fontconfig fontconfig-config fonts-circos-symbols fonts-cmu fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-droid-fallback fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-liberation fonts-liberation-sans-narrow fonts-lmodern fonts-lyx fonts-mathjax fonts-noto-mono fonts-urw-base35 freecontact fsa g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gasic gatb-core gawk gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins genometools genometools-common gff2aplot gff2ps gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu ghostscript glam2 gmap gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpgconf gpgsm graphicsmagick graphviz grinder gromacs gromacs-data gsettings-desktop-schemas gtk-update-icon-cache hhsuite 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r-cran-askpass r-cran-av r-cran-backports r-cran-base64enc r-cran-base64url r-cran-batchjobs r-cran-batchtools r-cran-bayesfactor r-cran-bayesplot r-cran-bbmisc r-cran-bbmle r-cran-bdsmatrix r-cran-beeswarm r-cran-bench r-cran-bh r-cran-biasedurn r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blme r-cran-blob r-cran-bookdown r-cran-boot r-cran-brew r-cran-brglm2 r-cran-bridgesampling r-cran-brio r-cran-brms r-cran-brobdingnag r-cran-broom r-cran-broom.helpers r-cran-broom.mixed r-cran-bslib r-cran-ca r-cran-cachem r-cran-cairo r-cran-callr r-cran-car r-cran-cardata r-cran-caret r-cran-catools r-cran-cba r-cran-cellranger r-cran-checkmate r-cran-chk r-cran-chron r-cran-class r-cran-cli r-cran-clipr r-cran-clock r-cran-clubsandwich r-cran-cluster r-cran-cmprsk r-cran-coda r-cran-codetools r-cran-coin r-cran-collapse r-cran-colorspace r-cran-colourpicker r-cran-commonmark r-cran-conflicted r-cran-conquer r-cran-contfrac r-cran-corrplot r-cran-covr r-cran-cowplot r-cran-cpp11 r-cran-crayon r-cran-credentials r-cran-crosstalk r-cran-curl r-cran-cvar r-cran-cvst r-cran-cyclocomp r-cran-data.table r-cran-datawizard r-cran-date r-cran-dbi r-cran-dbitest r-cran-dbplyr r-cran-dbscan r-cran-ddalpha r-cran-decor r-cran-deldir r-cran-dendextend r-cran-deoptimr r-cran-deriv r-cran-desc r-cran-desolve r-cran-devtools r-cran-dfoptim r-cran-diagram r-cran-dials r-cran-dicedesign r-cran-dichromat r-cran-diffobj r-cran-digest r-cran-dimred r-cran-diptest r-cran-distributional r-cran-doby r-cran-docopt r-cran-domc r-cran-doparallel r-cran-dorng r-cran-dotcall64 r-cran-downlit r-cran-dplyr r-cran-drr r-cran-dt r-cran-dtplyr r-cran-dygraphs r-cran-dynlm r-cran-e1071 r-cran-eaf r-cran-earth r-cran-effects r-cran-ellipse r-cran-ellipsis r-cran-elliptic r-cran-emdbook r-cran-emmeans r-cran-emoa r-cran-energy r-cran-enrichwith r-cran-epi r-cran-estimability r-cran-etm r-cran-evaluate r-cran-evd r-cran-expint r-cran-expm r-cran-extradistr r-cran-fansi r-cran-farver r-cran-fastica r-cran-fastmap r-cran-fastmatch r-cran-fbasics r-cran-fgarch r-cran-fields r-cran-filehash r-cran-fit.models r-cran-flexmix r-cran-fnn r-cran-fontawesome r-cran-fontbitstreamvera r-cran-fontliberation r-cran-fontquiver r-cran-forcats r-cran-foreach r-cran-forecast r-cran-foreign r-cran-formatr r-cran-formattable r-cran-formula r-cran-fpc r-cran-fracdiff r-cran-fs r-cran-furrr r-cran-futile.logger r-cran-futile.options r-cran-future r-cran-future.apply r-cran-g.data r-cran-gam r-cran-gamm4 r-cran-gargle r-cran-gbrd r-cran-gbutils r-cran-gclus r-cran-gdata r-cran-gee r-cran-geepack r-cran-generics r-cran-geometry r-cran-geosphere r-cran-gert r-cran-ggally r-cran-gganimate r-cran-ggbeeswarm r-cran-ggeffects r-cran-ggforce r-cran-ggfortify r-cran-ggplot2 r-cran-ggpubr r-cran-ggrepel r-cran-ggridges r-cran-ggsci r-cran-ggsignif r-cran-ggstats r-cran-gh r-cran-git2r r-cran-gitcreds r-cran-glmnet r-cran-globals r-cran-glue r-cran-gmm r-cran-gmp r-cran-googledrive r-cran-googlesheets4 r-cran-gower r-cran-gparotation r-cran-gplots r-cran-gridbase r-cran-gridextra r-cran-gridgraphics r-cran-gridsvg r-cran-gsl r-cran-gss r-cran-gtable r-cran-gtools r-cran-hardhat r-cran-haven r-cran-here r-cran-hexbin r-cran-highr r-cran-hmisc r-cran-hms r-cran-hsaur3 r-cran-htmltable r-cran-htmltools r-cran-htmlwidgets r-cran-httptest2 r-cran-httpuv r-cran-httr r-cran-httr2 r-cran-hunspell r-cran-hypergeo r-cran-ids r-cran-igraph r-cran-ini r-cran-inline r-cran-insight r-cran-intergraph r-cran-interp r-cran-inum r-cran-ipred r-cran-irace r-cran-irdisplay r-cran-irlba r-cran-isoband r-cran-iterators r-cran-itertools r-cran-janeaustenr r-cran-jomo r-cran-jpeg r-cran-jquerylib r-cran-jsonlite r-cran-kableextra r-cran-kernlab r-cran-kernsmooth r-cran-kmi r-cran-knitr r-cran-ks r-cran-labeling r-cran-labelled r-cran-lambda.r r-cran-later r-cran-lattice r-cran-latticeextra r-cran-lava r-cran-lavaan r-cran-lavasearch2 r-cran-lazyeval r-cran-lbfgsb3c r-cran-leaps r-cran-lhs r-cran-libcoin r-cran-lifecycle r-cran-linprog r-cran-lintr r-cran-listenv r-cran-littler r-cran-lme4 r-cran-lmertest r-cran-lmtest r-cran-lobstr r-cran-locfit r-cran-logcondens r-cran-logspline r-cran-loo r-cran-lpsolve r-cran-lsmeans r-cran-lubridate r-cran-magic r-cran-magick r-cran-magrittr r-cran-mapdata r-cran-mapproj r-cran-maps r-cran-marginaleffects r-cran-markdown r-cran-mass r-cran-matchit r-cran-mathjaxr r-cran-matrix r-cran-matrixmodels r-cran-matrixstats r-cran-maxlik r-cran-mclogit r-cran-mclust r-cran-mda r-cran-memisc r-cran-memoise r-cran-metadat r-cran-metafor r-cran-mets r-cran-mgcv r-cran-mice r-cran-microbenchmark r-cran-mime r-cran-miniui r-cran-minqa r-cran-misctools r-cran-mitml r-cran-mitools r-cran-mlbench r-cran-mlmetrics r-cran-mlmrev r-cran-mlr r-cran-mnormt r-cran-mockery r-cran-modeldata r-cran-modelmetrics r-cran-modelr r-cran-modeltools r-cran-msm r-cran-multcomp r-cran-multcompview r-cran-multicool r-cran-munsell r-cran-mvtnorm r-cran-nanoarrow r-cran-ncdf4 r-cran-network r-cran-nleqslv r-cran-nlme r-cran-nloptr r-cran-nmf r-cran-nnet r-cran-nnls r-cran-numderiv r-cran-openssl r-cran-openxlsx r-cran-optimparallel r-cran-optimx r-cran-ordinal r-cran-packrat r-cran-palmerpenguins r-cran-pammtools r-cran-pan r-cran-pander r-cran-parallelly r-cran-parallelmap r-cran-paramhelpers r-cran-party r-cran-partykit r-cran-patchwork r-cran-patrick r-cran-pbapply r-cran-pbivnorm r-cran-pbkrtest r-cran-pbmcapply r-cran-pcapp r-cran-pdftools r-cran-pec r-cran-permute r-cran-phangorn r-cran-pillar r-cran-pingr r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgdown r-cran-pkgkitten r-cran-pkgload r-cran-pki r-cran-plm r-cran-plogr r-cran-plotmo r-cran-plotrix r-cran-plumber r-cran-plyr r-cran-png r-cran-polspline r-cran-polyclip r-cran-polycor r-cran-polynom r-cran-poorman r-cran-popepi r-cran-posterior r-cran-prabclus r-cran-pracma r-cran-praise r-cran-prettyunits r-cran-proc r-cran-processx r-cran-prodlim r-cran-profmem r-cran-profvis r-cran-progress r-cran-progressr r-cran-projpred r-cran-promises r-cran-proxy r-cran-ps r-cran-pscl r-cran-psych r-cran-psychtools r-cran-publish r-cran-purrr r-cran-purrrlyr r-cran-pvclust r-cran-qap r-cran-qpdf r-cran-qtl r-cran-quadprog r-cran-quantmod r-cran-quantreg r-cran-quickjsr r-cran-r.cache r-cran-r.devices r-cran-r.methodss3 r-cran-r.oo r-cran-r.rsp r-cran-r.utils r-cran-r6 r-cran-ragg r-cran-randomforest r-cran-ranger r-cran-rann r-cran-rappdirs r-cran-raster r-cran-rbibutils r-cran-rcmdcheck r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcppml r-cran-rcppparallel r-cran-rcppprogress r-cran-rcpproll r-cran-rcpptoml r-cran-rcsdp r-cran-rcurl r-cran-rdpack r-cran-readr r-cran-readxl r-cran-recipes r-cran-registry r-cran-relsurv r-cran-rematch r-cran-rematch2 r-cran-remotes r-cran-renv r-cran-repr r-cran-reprex r-cran-reshape r-cran-reshape2 r-cran-reticulate r-cran-rex r-cran-rgl r-cran-rhpcblasctl r-cran-rio r-cran-riskregression r-cran-rlang r-cran-rmarkdown r-cran-rmpfr r-cran-rmpi r-cran-rms r-cran-rmysql r-cran-rngtools r-cran-robumeta r-cran-robust r-cran-robustbase r-cran-rocr r-cran-rose r-cran-roxygen2 r-cran-rpart r-cran-rpostgresql r-cran-rprojroot r-cran-rrcov r-cran-rsample r-cran-rsconnect r-cran-rsolnp r-cran-rspectra r-cran-rsqlite r-cran-rstan r-cran-rstanarm r-cran-rstantools r-cran-rstatix r-cran-rstudioapi r-cran-rsvg r-cran-rtdists r-cran-rtsne r-cran-runit r-cran-rversions r-cran-rvest r-cran-rwiener r-cran-sandwich r-cran-sass r-cran-scales r-cran-scatterplot3d r-cran-selectr r-cran-sendmailr r-cran-seriation r-cran-sessioninfo r-cran-setrng r-cran-sfsmisc r-cran-shape r-cran-shiny r-cran-shinyjs r-cran-shinystan r-cran-shinythemes r-cran-sjlabelled r-cran-slider r-cran-sm r-cran-smcfcs r-cran-sna r-cran-snakecase r-cran-sodium r-cran-sourcetools r-cran-sp r-cran-spam r-cran-sparsem r-cran-spatial r-cran-spelling r-cran-splines2 r-cran-squarem r-cran-stabledist r-cran-stanheaders r-cran-statmod r-cran-statnet.common r-cran-stringi r-cran-stringr r-cran-strucchange r-cran-survey r-cran-survival r-cran-svglite r-cran-swagger r-cran-sys r-cran-systemfit r-cran-systemfonts r-cran-tensora r-cran-terra r-cran-testit r-cran-testthat r-cran-textshaping r-cran-th.data r-cran-thematic r-cran-themis r-cran-threejs r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tidyverse r-cran-tikzdevice r-cran-timechange r-cran-timedate r-cran-timereg r-cran-timeseries r-cran-tinytest r-cran-tinytex r-cran-truncdist r-cran-truncnorm r-cran-tseries r-cran-tsp r-cran-ttr r-cran-tufte r-cran-tweenr r-cran-tzdb r-cran-ucminf r-cran-unitizer r-cran-urca r-cran-urlchecker r-cran-uroot r-cran-usethis r-cran-utf8 r-cran-uuid r-cran-v8 r-cran-vcd r-cran-vctrs r-cran-vdiffr r-cran-vegan r-cran-venndiagram r-cran-vgam r-cran-vioplot r-cran-vipor r-cran-viridis r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-warp r-cran-webfakes r-cran-webshot r-cran-webutils r-cran-whisker r-cran-whoami r-cran-withr r-cran-writexl r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xmlparsedata r-cran-xopen r-cran-xtable r-cran-xts r-cran-yaml r-cran-zeallot r-cran-zip r-cran-zoo r-doc-html r-other-mott-happy.hbrem r-recommended rake raster3d raxml readline-common readseq rnahybrid rpcsvc-proto rtax ruby ruby-net-telnet ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration samtools sensible-utils seqan-apps sgml-base shared-mime-info sibsim4 sigma-align sim4 smalt snap soapdenovo soapdenovo2 squizz sra-toolkit ssake sse4.2-support staden-io-lib-utils sysstat systemd systemd-cryptsetup systemd-sysv systemd-timesyncd t-coffee t1utils tabix tasksel tasksel-data tcl tcl8.6 tex-common texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base theseus tigr-glimmer tk8.6-blt2.5 tm-align tree-puzzle tree-puzzle-doc ttf-bitstream-vera ucf unicode-data unixodbc-common unzip va-driver-all vcftools vdpau-driver-all velvet w3c-sgml-lib wise wise-data x11-common x11-utils x11-xserver-utils xauth xdg-user-dirs xdg-utils xfonts-encodings xfonts-utils xkb-data xml-core xz-utils zip zlib1g-dev zutty Suggested packages: cron quota altree-examples apache2-doc apache2-suexec-pristine | apache2-suexec-custom texlive-latex-recommended binutils-doc gprofng-gui groff-base fasta3 trnascan-se hyphy-pt | hyphy-mpi libbio-tools-run-alignment-clustalw-perl pftools blends-doc blt-demo bowtie-examples bowtie2-examples seaview xfig texlive-latex-extra clonalframeml clustalx pymol cpp-doc gcc-14-locales cpp-14-doc ispell | aspell | hunspell wordlist pinentry-gnome3 tor debian-keyring embassy emboss-doc emboss-test fastlink-doc fonts-noto fonts-freefont-otf | fonts-freefont-ttf fonts-texgyre bash-completion g++-multilib g++-14-multilib gcc-14-doc gasic-examples gawk-doc gcc-multilib autoconf automake libtool flex bison gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu gfortran-multilib gfortran-doc gfortran-14-multilib gfortran-14-doc libcoarrays-dev gpg-wks-server parcimonie xloadimage scdaemon graphicsmagick-dbg gsfonts graphviz-doc hmmer-doc hunspell libreoffice-writer openoffice.org-hunspell | openoffice.org-core i965-va-driver-shaders imagemagick-6-doc autotrace cups-bsd | lpr | lprng curl enscript ffmpeg gimp gnuplot grads hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils transfig libraw-bin apache2 | lighttpd | httpd alsa-utils libasound2-plugins libatinject-jsr330-api-java-doc libdigest-hmac-perl libgssapi-perl libcuda1 libnvcuvid1 libnvidia-encode1 libxml-sax-expatxs-perl libbiojava-java-doc liblapack-doc libbluray-bdj libboost-doc libboost1.83-doc libboost-atomic1.83-dev libboost-chrono1.83-dev libboost-container1.83-dev libboost-context1.83-dev libboost-contract1.83-dev libboost-coroutine1.83-dev libboost-date-time1.83-dev libboost-exception1.83-dev libboost-fiber1.83-dev libboost-filesystem1.83-dev libboost-graph-parallel1.83-dev libboost-graph1.83-dev libboost-iostreams1.83-dev libboost-json1.83-dev libboost-locale1.83-dev libboost-log1.83-dev libboost-math1.83-dev libboost-mpi-python1.83-dev libboost-mpi1.83-dev libboost-nowide1.83-dev libboost-numpy1.83-dev libboost-program-options1.83-dev libboost-python1.83-dev libboost-random1.83-dev libboost-regex1.83-dev libboost-serialization1.83-dev libboost-stacktrace1.83-dev libboost-system1.83-dev libboost-test1.83-dev libboost-thread1.83-dev libboost-timer1.83-dev libboost-type-erasure1.83-dev libboost-url1.83-dev libboost-wave1.83-dev libboost1.83-tools-dev libmpfrc++-dev libntl-dev libc-devtools glibc-doc colord libcommons-collections3-java-doc libasm-java libxz-java libgeronimo-jta-1.2-spec-java libavalon-framework-java libexcalibur-logkit-java liblog4j1.2-java cups-common libnet-daemon-perl libsql-statement-perl git bzr libdvdcss2 libfftw3-bin libfftw3-dev jython libdom4j-java libjaxen-java libjdom1-java libxalan2-java libgd-tools gdbm-l10n geotiff-bin gdal-bin libgeotiff-epsg low-memory-monitor libiodbc2-dev default-libmysqlclient-dev libgoogle-gson-java-doc gpm gsl-ref-psdoc | gsl-doc-pdf | gsl-doc-info | gsl-ref-html krb5-doc krb5-user gvfs libhdf4-alt-dev hdf4-tools libheif-plugin-ffmpegdec libheif-plugin-jpegdec libheif-plugin-jpegenc libheif-plugin-j2kdec libheif-plugin-j2kenc libheif-plugin-kvazaar libheif-plugin-rav1e libheif-plugin-svtenc libhtml-element-extended-perl libhwloc-contrib-plugins icu-doc libdb-file-lock-perl libfile-readbackwards-perl libjoptsimple-java-doc libjs-jquery-ui-docs fonts-mathjax-extras fonts-stix libjs-mathjax-doc fonts-ubuntu fonts-yanone-kaffeesatz texlive-fonts-extra libjsr305-java-doc liblcms2-utils libactivation-java libcommons-csv-java libconversant-disruptor-java libdisruptor-java libgeronimo-jms-1.1-spec-java libjackson2-dataformat-xml-java libjackson2-dataformat-yaml libjansi-java libjctools-java libjeromq-java libmail-java libwoodstox-java libcrypt-ssleay-perl liblzma-doc inkscape libmpfi-doc ncurses-doc libngs-java-doc libtss2-rc0t64 odbc-postgresql tdsodbc ogdi-bin opus-tools libscalar-number-perl pciutils pcscd pulseaudio readline-doc rhino librsvg2-bin libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal libsasl2-modules-ldap libsasl2-modules-otp libsasl2-modules-sql lm-sensors serdi libmime-lite-perl libnet-jabber-perl sordi speex libstdc++-14-doc libarchive13t64 libbpf1 libdw1t64 libip4tc2 libpwquality1 libqrencode4 libtbb-doc tk8.6 tre-agrep libdevel-lexalias-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl libunicode-map8-perl libunicode-string-perl xml-twig-tools libyaml-shell-perl loki-doc make-doc man-browser anfo bagpipe blast2 cufflinks embassy-phylip giira melting-gui menu-l10n gksu | kde-cli-tools | ktsuss bandage mira-doc mrbayes-doc mustang-testdata libvibrant6t64 ncbi-cn3d ncbi-tools-x11 strap npm node-corepack openjdk-21-demo openjdk-21-source libnss-mdns fonts-ipafont-gothic fonts-ipafont-mincho fonts-wqy-microhei | fonts-wqy-zenhei fonts-indic keychain libpam-ssh monkeysphere ssh-askpass texlive-xetex texlive-luatex pandoc-citeproc context wkhtmltopdf groff ghc php python libjs-katex citation-style-language-styles csh fish ksh tcsh zsh parsinsert-testdata ed diffutils-doc apbs libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl debhelper phylip-doc pinentry-doc poppler-utils fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum njplot treeviewx probcons-extra python3-doc python3-venv python-attr-doc muscle3 python3-mysqldb python3-mmtf python3-rdflib python3-psycopg2 python-charset-normalizer-doc python-cycler-doc docutils-doc fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french python-elasticsearch-doc python3-genshi python-jinja2-doc python-lxml-doc cm-super-minimal dvipng fonts-staypuft gir1.2-gtk-3.0 ipython3 python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado texlive-extra-utils python-mpmath-doc python3-gmpy2 python-numpy-doc python3-dev python-pdbx-doc python-pil-doc python3-setuptools python-propka-doc python-pybedtools-doc python-pygments-doc python-pyparsing-doc pdf-viewer python3-egenix-mxtexttools python-reportlab-doc rl-accel rl-renderpm python3-cryptography python3-openssl python3-socks python-requests-doc python-rpy-docs python-scipy-doc python3-dap python-sklearn-doc python-sympy-doc tix python3-tk-dbg python3.12-venv python3.12-doc binfmt-support elpa-ess r-doc-info | r-doc-pdf r-mathlib r-base-html texlive-plain-generic texlive-fonts-recommended texinfo r-bioc-all r-bioc-golubesets r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-bioc-rhdf5 r-bioc-summarizedexperiment r-bioc-org.hs.eg.db r-cran-seuratobject r-bioc-rbgl r-bioc-go.db r-cran-future.batchtools r-cran-snow r-cran-ff r-cran-brglm r-cran-rjags r-cran-mcmcpack r-cran-cubature r-cran-bradleyterry2 r-cran-pls r-cran-performanceanalytics r-cran-heatmaply r-cran-dynamictreecut r-cran-circlize r-cran-pkgmaker r-cran-suppdists r-bioc-rgraphviz r-cran-units r-cran-sf r-cran-wordcloud r-cran-misc3d r-cran-plot3d r-cran-getopt r-cran-matching r-cran-rgenoud r-cran-gbm r-cran-rglpk r-cran-rsymphony r-cran-clue r-cran-glmmtmb r-cran-rodbc r-cran-tgp r-cran-bigmemory r-cran-corpcor r-cran-logger r-cran-rjava r-cran-psychotools r-cran-psychotree r-cran-seqinr r-bioc-seqlogo r-cran-nanotime r-cran-sjmisc r-cran-sjplot r-cran-sem r-cran-mockr raster3d-doc ri ruby-dev bundler cwltool cwltool | cwl-runner sgml-base-doc ssake-examples staden-io-lib-examples isag systemd-container systemd-homed systemd-userdbd systemd-boot systemd-resolved systemd-repart libtss2-tcti-device0 polkitd t-coffee-examples tcl-tclreadline xpdf | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc wp2latex theseus-examples rasmol treetool nvidia-vdpau-driver nvidia-tesla-440-vdpau-driver nvidia-tesla-418-vdpau-driver nvidia-legacy-390xx-vdpau-driver nvidia-legacy-340xx-vdpau-driver velvet-example wise-doc mesa-utils nickle cairo-5c xorg-docs-core Recommended packages: blast2 acedb-other ampliconnoise muscle3 python3-cogent3 qiime r-cran-glmmtmb r-cran-performance r-cran-spdep r-cran-epir r-cran-spatialreg r-cran-parameters r-cran-tmb r-cran-bayestestr r-cran-effectsize r-cran-transformr r-cran-sjstats r-cran-sf r-cran-mockr r-cran-estimatr r-cran-gbm r-cran-mertools r-cran-gstat r-cran-exactextractr The following NEW packages will be installed: abyss adduser adwaita-icon-theme aevol alien-hunter alsa-topology-conf alsa-ucm-conf altree amap-align apache2-bin aragorn arden at-spi2-common at-spi2-core autodock autodock-vina autogrid bamtools bc bcalm bcftools bedtools binutils binutils-common binutils-x86-64-linux-gnu bioperl bioperl-run biosquid blends-common blt bowtie bowtie2 boxshade bsdextrautils build-essential bwa bzip2 bzip2-doc ca-certificates ca-certificates-java cassiopee cd-hit cdbfasta circos circos-tools clearcut clonalframe clustalo clustalw concavity conservation-code cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu datamash dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jdk-headless default-jre default-jre-headless dialign dialign-tx dialign-tx-data dictionaries-common dirmngr discosnp disulfinder disulfinder-data dmidecode dmsetup dnaclust docutils-common dpkg-dev dssp dvisvgm emacsen-common embassy-domainatrix embassy-domalign embassy-domsearch emboss emboss-data emboss-lib exonerate fakeroot fastdnaml fastlink fastqc fasttree file fitgcp flexbar fontconfig fontconfig-config fonts-circos-symbols fonts-cmu fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-droid-fallback fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-liberation fonts-liberation-sans-narrow fonts-lmodern fonts-lyx fonts-mathjax fonts-noto-mono fonts-urw-base35 freecontact fsa g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gasic gatb-core gawk gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins genometools genometools-common gff2aplot gff2ps gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu ghostscript glam2 gmap gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpgconf gpgsm graphicsmagick graphviz grinder gromacs gromacs-data gsettings-desktop-schemas gtk-update-icon-cache hhsuite hhsuite-data hicolor-icon-theme hisat2 hmmer hunspell-en-gb hunspell-en-us i965-va-driver ibverbs-providers icu-devtools idba imagemagick imagemagick-6-common imagemagick-6.q16 infernal intel-media-va-driver isa-support isympy-common isympy3 java-common java-wrappers javascript-common jellyfish kalign kissplice krb5-locales lagan laptop-detect last-align lib32gcc-s1 lib32stdc++6 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libcommons-cli-java libcommons-codec-java libcommons-collections3-java libcommons-compress-java libcommons-dbcp-java libcommons-io-java libcommons-jexl2-java libcommons-lang3-java libcommons-logging-java libcommons-math3-java libcommons-parent-java libcommons-pool-java libconfig-general-perl libconvert-binary-c-perl libconvert-binhex-perl libcppunit-1.15-0 libcrypt-dev libcrypt-rc4-perl libcryptsetup12 libctf-nobfd0 libctf0 libcups2t64 libcurl3t64-gnutls libcurl4t64 libdata-dump-perl libdata-dumper-simple-perl libdata-stag-perl libdate-calc-perl libdate-calc-xs-perl libdate-manip-perl libdatrie1 libdav1d7 libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libdbus-1-3 libdconf1 libde265-0 libdeflate-dev libdeflate0 libdevel-callchecker-perl libdevel-stacktrace-perl libdevel-symdump-perl libdevmapper1.02.1 libdigest-perl-md5-perl libdivsufsort3 libdjvulibre-text libdjvulibre21 libdpkg-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-radeon1 libdrm2 libdvdnav4 libdvdread8t64 libdynaloader-functions-perl libedit2 libegl-mesa0 libegl1 libelf1t64 libencode-locale-perl libencode-perl libepoxy0 liberror-perl liberror-prone-java libevent-core-2.1-7t64 libevent-pthreads-2.1-7t64 libexception-class-perl libexpat1 libexporter-tiny-perl libfabric1 libfakeroot libfcgi-bin libfcgi-perl libfcgi0t64 libfftw3-double3 libfftw3-single3 libfido2-1 libfile-basedir-perl libfile-desktopentry-perl libfile-fcntllock-perl libfile-listing-perl libfile-mimeinfo-perl libfile-slurp-tiny-perl libfile-sort-perl libfindbin-libs-perl libflac12t64 libflite1 libfont-afm-perl libfont-ttf-perl libfontconfig1 libfontenc1 libfreecontact0t64 libfreemarker-java libfreetype6 libfreexl1 libfreezethaw-perl libfribidi0 libfyba0t64 libg20 libgatbcore3 libgatk-native-bindings-java libgav1-1 libgbm1 libgcc-14-dev libgclib3 libgd-perl libgd3 libgdal35 libgdbm-compat4t64 libgdbm6t64 libgdk-pixbuf-2.0-0 libgdk-pixbuf2.0-bin libgdk-pixbuf2.0-common libgeos-c1t64 libgeos3.13.0 libgeotiff5 libgetopt-euclid-perl libgetopt-simple-perl libgflags2.2 libgfortran-14-dev libgfortran5 libgif7 libgit2-1.7 libgkl-java libgkl-jni libgl1 libgl1-mesa-dri libglapi-mesa libgles2 libglib2.0-0t64 libglib2.0-data libglpk40 libglu1-mesa libglvnd0 libglx-mesa0 libglx0 libgme0 libgomp1 libgoogle-glog0v6t64 libgoogle-gson-java libgpm2 libgprofng0 libgraph-perl libgraphics-colornames-perl libgraphics-colorobject-perl libgraphicsmagick-q16-3t64 libgraphite2-3 libgraphviz-perl libgromacs9 libgs-common libgs10 libgs10-common libgsl28 libgslcblas0 libgsm1 libgssapi-krb5-2 libgtk-3-0t64 libgtk-3-bin libgtk-3-common libgts-0.7-5t64 libgts-bin libguava-java libgumbo2 libgvc6 libgvpr2 libharfbuzz0b libhdf4-0-alt libhdf5-103-1t64 libhdf5-hl-100t64 libheap-perl libheif-plugin-aomenc libheif-plugin-dav1d libheif-plugin-libde265 libheif-plugin-x265 libheif1 libhmsbeagle1v5 libhpdf-2.3.0 libhsa-runtime64-1 libhsakmt1 libhtml-form-perl libhtml-format-perl libhtml-parser-perl libhtml-tableextract-perl libhtml-tagset-perl libhtml-tree-perl libhts3t64 libhtscodecs2 libhtsjdk-java libhttp-cookies-perl libhttp-daemon-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libhttp-parser2.9 libhttpclient-java libhttpcore-java libhunspell-1.7-0 libhwasan0 libhwloc-plugins libhwloc15 libhwy1t64 libibmad5 libibumad3 libibverbs1 libice6 libicu-dev libicu72 libidn12 libigdgmm12 libijs-0.35 libimagequant0 libimath-3-1-29t64 libimport-into-perl libio-all-perl libio-compress-brotli-perl libio-html-perl libio-pty-perl libio-sessiondata-perl libio-socket-ssl-perl libio-string-perl libio-stringy-perl libipc-run-perl libipc-sharelite-perl libipc-system-simple-perl libisl23 libitm1 libjansson4 libjbig0 libjbig2dec0 libjbzip2-java libjcode-pm-perl libjellyfish-2.0-2 libjgraph-java libjgrapht0.8-java libjoptsimple-java libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-bootstrap libjs-bootstrap4 libjs-bootswatch libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery libjs-jquery-datatables libjs-jquery-datatables-extensions libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-lunr libjs-mathjax libjs-microplugin.js libjs-modernizr libjs-popper.js libjs-prettify libjs-remark-slide libjs-sifter.js libjs-sizzle libjs-twitter-bootstrap-datepicker libjs-underscore libjson-c5 libjsoncpp25 libjsr305-java libjxl0.9 libjxr-tools libjxr0t64 libk5crypto3 libkeyutils1 libkmlbase1t64 libkmldom1t64 libkmlengine1t64 libkmod2 libkpathsea6 libkrb5-3 libkrb5support0 libksba8 liblab-gamut1 liblapack-dev liblapack3 liblatex-tounicode-perl liblbfgsb0 liblcms2-2 libldap-2.5-0 libldap-common liblerc4 liblightcouch-java liblilv-0-0 liblist-allutils-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-someutils-xs-perl liblist-utilsby-perl libllvm17t64 libllvm18 libllvmspirvlib18.1 liblmdb0 liblocale-gettext-perl liblog4j2-java liblqr-1-0 liblsan0 libltdl7 liblua5.1-0 liblua5.4-0 liblwp-mediatypes-perl liblwp-protocol-https-perl liblzma-dev libmagic-mgc libmagic1t64 libmagick++-6.q16-9t64 libmagickcore-6.q16-7-extra libmagickcore-6.q16-7t64 libmagickwand-6.q16-7t64 libmailtools-perl libmariadb3 libmath-bezier-perl libmath-derivative-perl libmath-random-mt-perl libmath-round-perl libmath-spline-perl libmath-tamuanova-perl libmath-vec-perl libmath-vecstat-perl libmbedcrypto7t64 libmbedtls14t64 libmbedx509-1t64 libmime-tools-perl libminizip1t64 libmjson-java libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmongodb-java libmoo-perl libmp3lame0 libmpc3 libmpfi0 libmpfr6 libmpg123-0t64 libmujs3 libmunge2 libmuparser2v5 libmysofa1 libnamespace-clean-perl libncbi-ngs3 libncbi-vdb3 libncbi-wvdb3 libncbi6t64 libncurses-dev libncurses6 libncursesw6 libnet-dbus-perl libnet-http-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnetcdf19t64 libnetpbm11t64 libnghttp2-14 libnghttp3-9 libngs-java libngs-jni libngtcp2-16 libngtcp2-crypto-gnutls8 libnl-3-200 libnl-route-3-200 libnlopt0 libnode115 libnorm1t64 libnpth0t64 libnsl2 libnspr4 libnss-systemd libnss3 libnuma1 libnumber-format-perl libodbc2 libodbcinst2 libogdi4.1 libogg0 libole-storage-lite-perl libopenblas0 libopenblas0-pthread libopenexr-3-1-30 libopengl0 libopenjp2-7 libopenmpi3t64 libopenmpt0t64 libopus0 libpackage-stash-perl libpackage-stash-xs-perl libpam-systemd libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl libparams-validate-perl libparse-recdescent-perl libpathplan4 libpciaccess0 libpcre2-16-0 libpcre2-32-0 libpcre2-dev libpcre2-posix3 libpcsclite1 libperl4-corelibs-perl libperl5.38t64 libpgm-5.3-0t64 libpicard-java libpixman-1-0 libpkgconf3 libplacebo349 libpmix2t64 libpng-dev libpng-tools libpng16-16t64 libpocketsphinx3 libpod-coverage-perl libpod-parser-perl libpoppler-cpp1 libpoppler140 libpostproc58 libpostscript-perl libpotrace0 libpq5 libproc2-0 libproj25 libpsl5t64 libpsm-infinipath1 libpsm2-2 libptexenc1 libpulse0 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libqhull-r8.0 libqpdf29t64 libquadmath0 librabbitmq4 libraqm0 librav1e0.7 libraw23t64 librdmacm1t64 libre2-11 libreadline-dev libreadline8t64 libreadonly-perl libref-util-perl libref-util-xs-perl libregexp-common-perl librhino-java librist4 librole-tiny-perl librsvg2-2 librsvg2-common librtmp1 librttopo1 librubberband2 libruby libruby3.1t64 libsamplerate0 libsasl2-2 libsasl2-modules libsasl2-modules-db libsensors-config libsensors5 libserd-0-0 libset-intspan-perl libset-object-perl libset-scalar-perl libsframe1 libsharpyuv0 libshine3 libsigsegv2 libslf4j-java libsm6 libsnappy-java libsnappy-jni libsnappy1v5 libsndfile1 libsoap-lite-perl libsodium23 libsord-0-0 libsort-naturally-perl libsoxr0 libspatialite8t64 libspeex1 libsphinxbase3t64 libspiffy-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsprng2 libsqlite3-0 libsquid1t64 libsquizz libsratom-0-0 libsrt1.5-gnutls libssh-4 libssh2-1t64 libstaden-read14t64 libstatistics-basic-perl 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python3-roman python3-rpy2 python3-scipy python3-simplejson python3-six python3-sklearn python3-sklearn-lib python3-soupsieve python3-sympy python3-threadpoolctl python3-tk python3-typeguard python3-typing-extensions python3-tz python3-tzlocal python3-ufolib2 python3-unicodedata2 python3-urllib3 python3-webencodings python3-zipp python3.12 python3.12-minimal python3.12-tk python3.13-tk r-base-core r-base-dev r-bioc-biobase r-bioc-biocgenerics r-bioc-biocstyle r-bioc-biocversion r-bioc-edger r-bioc-graph r-bioc-hilbertvis r-bioc-limma r-cran-abind r-cran-acepack r-cran-actuar r-cran-admisc r-cran-aer r-cran-afex r-cran-amelia r-cran-ape r-cran-arm r-cran-askpass r-cran-av r-cran-backports r-cran-base64enc r-cran-base64url r-cran-batchjobs r-cran-batchtools r-cran-bayesfactor r-cran-bayesplot r-cran-bbmisc r-cran-bbmle r-cran-bdsmatrix r-cran-beeswarm r-cran-bench r-cran-bh r-cran-biasedurn r-cran-biocmanager r-cran-bit r-cran-bit64 r-cran-bitops r-cran-blme r-cran-blob r-cran-bookdown 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r-cran-r.rsp r-cran-r.utils r-cran-r6 r-cran-ragg r-cran-randomforest r-cran-ranger r-cran-rann r-cran-rappdirs r-cran-raster r-cran-rbibutils r-cran-rcmdcheck r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcppml r-cran-rcppparallel r-cran-rcppprogress r-cran-rcpproll r-cran-rcpptoml r-cran-rcsdp r-cran-rcurl r-cran-rdpack r-cran-readr r-cran-readxl r-cran-recipes r-cran-registry r-cran-relsurv r-cran-rematch r-cran-rematch2 r-cran-remotes r-cran-renv r-cran-repr r-cran-reprex r-cran-reshape r-cran-reshape2 r-cran-reticulate r-cran-rex r-cran-rgl r-cran-rhpcblasctl r-cran-rio r-cran-riskregression r-cran-rlang r-cran-rmarkdown r-cran-rmpfr r-cran-rmpi r-cran-rms r-cran-rmysql r-cran-rngtools r-cran-robumeta r-cran-robust r-cran-robustbase r-cran-rocr r-cran-rose r-cran-roxygen2 r-cran-rpart r-cran-rpostgresql r-cran-rprojroot r-cran-rrcov r-cran-rsample r-cran-rsconnect r-cran-rsolnp r-cran-rspectra r-cran-rsqlite r-cran-rstan r-cran-rstanarm 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r-cran-tidyselect r-cran-tidyverse r-cran-tikzdevice r-cran-timechange r-cran-timedate r-cran-timereg r-cran-timeseries r-cran-tinytest r-cran-tinytex r-cran-truncdist r-cran-truncnorm r-cran-tseries r-cran-tsp r-cran-ttr r-cran-tufte r-cran-tweenr r-cran-tzdb r-cran-ucminf r-cran-unitizer r-cran-urca r-cran-urlchecker r-cran-uroot r-cran-usethis r-cran-utf8 r-cran-uuid r-cran-v8 r-cran-vcd r-cran-vctrs r-cran-vdiffr r-cran-vegan r-cran-venndiagram r-cran-vgam r-cran-vioplot r-cran-vipor r-cran-viridis r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-warp r-cran-webfakes r-cran-webshot r-cran-webutils r-cran-whisker r-cran-whoami r-cran-withr r-cran-writexl r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xmlparsedata r-cran-xopen r-cran-xtable r-cran-xts r-cran-yaml r-cran-zeallot r-cran-zip r-cran-zoo r-doc-html r-other-mott-happy.hbrem r-recommended rake raster3d raxml readline-common readseq rnahybrid rpcsvc-proto rtax ruby ruby-net-telnet ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration samtools sensible-utils seqan-apps sgml-base shared-mime-info sibsim4 sigma-align sim4 smalt snap soapdenovo soapdenovo2 squizz sra-toolkit ssake sse4.2-support staden-io-lib-utils sysstat systemd systemd-cryptsetup systemd-sysv systemd-timesyncd t-coffee t1utils tabix tasksel tasksel-data tcl tcl8.6 tex-common texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base theseus tigr-glimmer tk8.6-blt2.5 tm-align tree-puzzle tree-puzzle-doc ttf-bitstream-vera ucf unicode-data unixodbc-common unzip va-driver-all vcftools vdpau-driver-all velvet w3c-sgml-lib wise wise-data x11-common x11-utils x11-xserver-utils xauth xdg-user-dirs xdg-utils xfonts-encodings xfonts-utils xkb-data xml-core xz-utils zip zlib1g-dev zutty 0 upgraded, 1910 newly installed, 0 to remove and 0 not upgraded. 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fonts-liberation all 1:2.1.5-3 [1475 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 libfontenc1 amd64 1:1.1.8-1 [23.0 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get:38 http://deb.debian.org/debian trixie/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get:39 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 libdav1d7 amd64 1.4.3-1 [551 kB] Get:43 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-dav1d amd64 1.18.1-2 [10.7 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 libde265-0 amd64 1.0.15-1+b2 [189 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-libde265 amd64 1.18.1-2 [14.0 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 libheif1 amd64 1.18.1-2 [312 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.14-2+b1 [154 kB] Get:50 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14.2.0-3 [9288 B] Get:51 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.82.1-1 [1499 kB] Get:52 http://deb.debian.org/debian trixie/main amd64 liblqr-1-0 amd64 0.4.2-2.1+b1 [29.2 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 libltdl7 amd64 2.4.7-7+b1 [393 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libopenjp2-7 amd64 2.5.0-2+b3 [190 kB] Get:55 http://deb.debian.org/debian trixie/main amd64 libraw23t64 amd64 0.21.2-2.1 [388 kB] Get:56 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.21-1 [47.3 kB] Get:57 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get:58 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get:59 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:60 http://deb.debian.org/debian trixie/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [110 kB] Get:61 http://deb.debian.org/debian trixie/main amd64 libwebpmux3 amd64 1.4.0-0.1 [123 kB] Get:62 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:63 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get:64 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get:65 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:66 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get:67 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:68 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:69 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get:70 http://deb.debian.org/debian trixie/main amd64 imagemagick-6-common all 8:6.9.13.12+dfsg1-1 [67.3 kB] Get:71 http://deb.debian.org/debian trixie/main amd64 libmagickcore-6.q16-7t64 amd64 8:6.9.13.12+dfsg1-1 [1710 kB] Get:72 http://deb.debian.org/debian trixie/main amd64 libmagickwand-6.q16-7t64 amd64 8:6.9.13.12+dfsg1-1 [311 kB] Get:73 http://deb.debian.org/debian trixie/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-3.2 [281 kB] Get:74 http://deb.debian.org/debian trixie/main amd64 libboost-thread1.83.0 amd64 1.83.0-3.2 [269 kB] Get:75 http://deb.debian.org/debian trixie/main amd64 mira-assembler amd64 4.9.6-11 [2568 kB] Get:76 http://deb.debian.org/debian trixie/main amd64 mira-rfam-12s-rrna all 4.9.6-11 [10.4 MB] Get:77 http://deb.debian.org/debian trixie/main amd64 poppler-data all 0.4.12-1 [1601 kB] Get:78 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.6-1 [814 kB] Get:79 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.6-1 [2168 kB] Get:80 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.12.5-1+b1 [27.0 kB] Get:81 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get:82 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get:83 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5-2 [135 kB] Get:84 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:85 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:86 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:87 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:88 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:89 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get:90 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3 [82.7 kB] Get:91 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b2 [40.3 kB] Get:92 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.0-1 [902 kB] Get:93 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.6-1 [1963 kB] Get:94 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.6-1 [669 kB] Get:95 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.12.5-1+b1 [9884 B] Get:96 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.12.5-1+b1 [27.9 kB] Get:97 http://deb.debian.org/debian trixie/main amd64 sgml-base all 1.31 [15.4 kB] Get:98 http://deb.debian.org/debian trixie/main amd64 isa-support amd64 24 [14.4 kB] Get:99 http://deb.debian.org/debian trixie/main amd64 sse4.2-support amd64 24 [3496 B] Get:100 http://deb.debian.org/debian trixie/main amd64 tasksel-data all 3.75 [18.0 kB] Get:101 http://deb.debian.org/debian trixie/main amd64 tasksel all 3.75 [50.7 kB] Get:102 http://deb.debian.org/debian trixie/main amd64 dmidecode amd64 3.6-1 [69.2 kB] Get:103 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-5 [64.7 kB] Get:104 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-5 [878 kB] Get:105 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:106 http://deb.debian.org/debian trixie/main amd64 bzip2 amd64 1.0.8-6 [40.5 kB] Get:107 http://deb.debian.org/debian trixie/main amd64 openssl amd64 3.3.2-1 [1381 kB] Get:108 http://deb.debian.org/debian trixie/main amd64 ca-certificates all 20240203 [158 kB] Get:109 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:110 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:111 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:112 http://deb.debian.org/debian trixie/main amd64 krb5-locales all 1.21.3-3 [101 kB] Get:113 http://deb.debian.org/debian trixie/main amd64 libnss-systemd amd64 256.6-1 [203 kB] Get:114 http://deb.debian.org/debian trixie/main amd64 libpam-systemd amd64 256.6-1 [278 kB] Get:115 http://deb.debian.org/debian trixie/main amd64 manpages all 6.8-2 [1389 kB] Get:116 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get:117 http://deb.debian.org/debian trixie/main amd64 libcbor0.10 amd64 0.10.2-2 [28.3 kB] Get:118 http://deb.debian.org/debian trixie/main amd64 libfido2-1 amd64 1.15.0-1 [78.5 kB] Get:119 http://deb.debian.org/debian trixie/main amd64 openssh-client amd64 1:9.8p1-8 [965 kB] Get:120 http://deb.debian.org/debian trixie/main amd64 systemd-timesyncd amd64 256.6-1 [85.4 kB] Get:121 http://deb.debian.org/debian trixie/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:122 http://deb.debian.org/debian trixie/main amd64 xz-utils amd64 5.6.2-2 [522 kB] Get:123 http://deb.debian.org/debian trixie/main amd64 make amd64 4.3-4.1 [396 kB] Get:124 http://deb.debian.org/debian trixie/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10 [131 kB] Get:125 http://deb.debian.org/debian trixie/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10 [53.9 kB] Get:126 http://deb.debian.org/debian trixie/main amd64 libnl-3-200 amd64 3.7.0-0.3 [59.0 kB] Get:127 http://deb.debian.org/debian trixie/main amd64 libnl-route-3-200 amd64 3.7.0-0.3 [181 kB] Get:128 http://deb.debian.org/debian trixie/main amd64 libibverbs1 amd64 52.0-2 [61.6 kB] Get:129 http://deb.debian.org/debian trixie/main amd64 ibverbs-providers amd64 52.0-2 [343 kB] Get:130 http://deb.debian.org/debian trixie/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get:131 http://deb.debian.org/debian trixie/main amd64 libnuma1 amd64 2.0.18-1 [21.9 kB] Get:132 http://deb.debian.org/debian trixie/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get:133 http://deb.debian.org/debian trixie/main amd64 librdmacm1t64 amd64 52.0-2 [70.2 kB] Get:134 http://deb.debian.org/debian trixie/main amd64 libfabric1 amd64 1.17.0-3+b1 [628 kB] Get:135 http://deb.debian.org/debian trixie/main amd64 libhwloc15 amd64 2.11.0-2 [162 kB] Get:136 http://deb.debian.org/debian trixie/main amd64 libmunge2 amd64 0.5.15-4 [19.8 kB] Get:137 http://deb.debian.org/debian trixie/main amd64 libpciaccess0 amd64 0.17-3+b1 [51.9 kB] Get:138 http://deb.debian.org/debian trixie/main amd64 libxnvctrl0 amd64 535.171.04-1 [13.8 kB] Get:139 http://deb.debian.org/debian trixie/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b1 [40.3 kB] Get:140 http://deb.debian.org/debian trixie/main amd64 libhwloc-plugins amd64 2.11.0-2 [17.9 kB] Get:141 http://deb.debian.org/debian trixie/main amd64 libpmix2t64 amd64 5.0.3-2 [658 kB] Get:142 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get:143 http://deb.debian.org/debian trixie/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB] Get:144 http://deb.debian.org/debian trixie/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b1 [13.0 MB] Get:145 http://deb.debian.org/debian trixie/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get:146 http://deb.debian.org/debian trixie/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get:147 http://deb.debian.org/debian trixie/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get:148 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-2 [188 kB] Get:149 http://deb.debian.org/debian trixie/main amd64 libhsakmt1 amd64 5.7.0-1 [60.7 kB] Get:150 http://deb.debian.org/debian trixie/main amd64 libhsa-runtime64-1 amd64 5.7.1-3 [510 kB] Get:151 http://deb.debian.org/debian trixie/main amd64 libamdhip64-5 amd64 5.7.1-3 [8760 kB] Get:152 http://deb.debian.org/debian trixie/main amd64 libibumad3 amd64 52.0-2 [27.7 kB] Get:153 http://deb.debian.org/debian trixie/main amd64 libibmad5 amd64 52.0-2 [43.3 kB] Get:154 http://deb.debian.org/debian trixie/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get:155 http://deb.debian.org/debian trixie/main amd64 libopenmpi3t64 amd64 4.1.6-13.3 [2426 kB] Get:156 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-8 [97.3 kB] Get:157 http://deb.debian.org/debian trixie/main amd64 openmpi-common all 4.1.6-13.3 [169 kB] Get:158 http://deb.debian.org/debian trixie/main amd64 openmpi-bin amd64 4.1.6-13.3 [226 kB] Get:159 http://deb.debian.org/debian trixie/main amd64 abyss amd64 2.3.9-1 [3320 kB] Get:160 http://deb.debian.org/debian trixie/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get:161 http://deb.debian.org/debian trixie/main amd64 shared-mime-info amd64 2.4-5 [758 kB] Get:162 http://deb.debian.org/debian trixie/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1 [139 kB] Get:163 http://deb.debian.org/debian trixie/main amd64 gtk-update-icon-cache amd64 4.16.1+ds-2 [48.7 kB] Get:164 http://deb.debian.org/debian trixie/main amd64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get:165 http://deb.debian.org/debian trixie/main amd64 adwaita-icon-theme all 47.0-1 [463 kB] Get:166 http://deb.debian.org/debian trixie/main amd64 aevol amd64 5.0+ds-3+b2 [562 kB] Get:167 http://deb.debian.org/debian trixie/main amd64 ca-certificates-java all 20240118 [11.6 kB] Get:168 http://deb.debian.org/debian trixie/main amd64 java-common all 0.76 [6776 B] Get:169 http://deb.debian.org/debian trixie/main amd64 libnspr4 amd64 2:4.35-1.1+b1 [109 kB] Get:170 http://deb.debian.org/debian trixie/main amd64 libnss3 amd64 2:3.103-1 [1352 kB] Get:171 http://deb.debian.org/debian trixie/main amd64 libpcsclite1 amd64 2.3.0-1 [55.4 kB] Get:172 http://deb.debian.org/debian trixie/main amd64 openjdk-21-jre-headless amd64 21.0.5~8ea-1 [41.8 MB] Get:173 http://deb.debian.org/debian trixie/main amd64 default-jre-headless amd64 2:1.21-76 [3192 B] Get:174 http://deb.debian.org/debian trixie/main amd64 at-spi2-common all 2.54.0-1 [170 kB] Get:175 http://deb.debian.org/debian trixie/main amd64 libatk1.0-0t64 amd64 2.54.0-1 [51.2 kB] Get:176 http://deb.debian.org/debian trixie/main amd64 libxi6 amd64 2:1.8.1-1 [79.0 kB] Get:177 http://deb.debian.org/debian trixie/main amd64 libatspi2.0-0t64 amd64 2.54.0-1 [76.4 kB] Get:178 http://deb.debian.org/debian trixie/main amd64 libatk-bridge2.0-0t64 amd64 2.54.0-1 [67.6 kB] Get:179 http://deb.debian.org/debian trixie/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB] Get:180 http://deb.debian.org/debian trixie/main amd64 libxcb-render0 amd64 1.17.0-2 [115 kB] Get:181 http://deb.debian.org/debian trixie/main amd64 libxcb-shm0 amd64 1.17.0-2 [105 kB] Get:182 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get:183 http://deb.debian.org/debian trixie/main amd64 libcairo2 amd64 1.18.2-1 [534 kB] Get:184 http://deb.debian.org/debian trixie/main amd64 libcairo-gobject2 amd64 1.18.2-1 [130 kB] Get:185 http://deb.debian.org/debian trixie/main amd64 libcloudproviders0 amd64 0.3.6-1 [28.9 kB] Get:186 http://deb.debian.org/debian trixie/main amd64 libcolord2 amd64 1.4.7-1+b1 [139 kB] Get:187 http://deb.debian.org/debian trixie/main amd64 libavahi-common-data amd64 0.8-13+b2 [112 kB] Get:188 http://deb.debian.org/debian trixie/main amd64 libavahi-common3 amd64 0.8-13+b2 [43.3 kB] Get:189 http://deb.debian.org/debian trixie/main amd64 libavahi-client3 amd64 0.8-13+b2 [47.0 kB] Get:190 http://deb.debian.org/debian trixie/main amd64 libcups2t64 amd64 2.4.10-1 [249 kB] Get:191 http://deb.debian.org/debian trixie/main amd64 libepoxy0 amd64 1.5.10-1+b2 [191 kB] Get:192 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get:193 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get:194 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 9.0.0-1 [474 kB] Get:195 http://deb.debian.org/debian trixie/main amd64 fontconfig amd64 2.15.0-1.1 [463 kB] Get:196 http://deb.debian.org/debian trixie/main amd64 libthai-data all 0.1.29-2 [168 kB] Get:197 http://deb.debian.org/debian trixie/main amd64 libdatrie1 amd64 0.2.13-3 [37.7 kB] Get:198 http://deb.debian.org/debian trixie/main amd64 libthai0 amd64 0.1.29-2 [49.1 kB] Get:199 http://deb.debian.org/debian trixie/main amd64 libpango-1.0-0 amd64 1.54.0+ds-2 [223 kB] Get:200 http://deb.debian.org/debian trixie/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-2 [54.4 kB] Get:201 http://deb.debian.org/debian trixie/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-2 [35.2 kB] Get:202 http://deb.debian.org/debian trixie/main amd64 libwayland-client0 amd64 1.23.0-1 [26.4 kB] Get:203 http://deb.debian.org/debian trixie/main amd64 libwayland-cursor0 amd64 1.23.0-1 [11.3 kB] Get:204 http://deb.debian.org/debian trixie/main amd64 libwayland-egl1 amd64 1.23.0-1 [5392 B] Get:205 http://deb.debian.org/debian trixie/main amd64 libxcomposite1 amd64 1:0.4.5-1+b1 [14.9 kB] Get:206 http://deb.debian.org/debian trixie/main amd64 libxfixes3 amd64 1:6.0.0-2+b1 [20.3 kB] Get:207 http://deb.debian.org/debian trixie/main amd64 libxcursor1 amd64 1:1.2.2-1 [37.1 kB] Get:208 http://deb.debian.org/debian trixie/main amd64 libxdamage1 amd64 1:1.1.6-1+b1 [15.5 kB] Get:209 http://deb.debian.org/debian trixie/main amd64 libxinerama1 amd64 2:1.1.4-3+b1 [16.0 kB] Get:210 http://deb.debian.org/debian trixie/main amd64 xkb-data all 2.42-1 [790 kB] Get:211 http://deb.debian.org/debian trixie/main amd64 libxkbcommon0 amd64 1.6.0-1+b1 [109 kB] Get:212 http://deb.debian.org/debian trixie/main amd64 libxrandr2 amd64 2:1.5.4-1 [36.1 kB] Get:213 http://deb.debian.org/debian trixie/main amd64 dbus-user-session amd64 1.14.10-4+b1 [79.1 kB] Get:214 http://deb.debian.org/debian trixie/main amd64 libdconf1 amd64 0.40.0-4+b2 [41.9 kB] Get:215 http://deb.debian.org/debian trixie/main amd64 dconf-service amd64 0.40.0-4+b2 [32.4 kB] Get:216 http://deb.debian.org/debian trixie/main amd64 dconf-gsettings-backend amd64 0.40.0-4+b2 [28.7 kB] Get:217 http://deb.debian.org/debian trixie/main amd64 libgtk-3-common all 3.24.43-4 [4657 kB] Get:218 http://deb.debian.org/debian trixie/main amd64 libgtk-3-0t64 amd64 3.24.43-4 [2754 kB] Get:219 http://deb.debian.org/debian trixie/main amd64 libglvnd0 amd64 1.7.0-1+b1 [56.3 kB] Get:220 http://deb.debian.org/debian trixie/main amd64 libglapi-mesa amd64 24.2.2-1 [37.8 kB] Get:221 http://deb.debian.org/debian trixie/main amd64 libx11-xcb1 amd64 2:1.8.7-1+b1 [232 kB] Get:222 http://deb.debian.org/debian trixie/main amd64 libxcb-dri2-0 amd64 1.17.0-2 [106 kB] Get:223 http://deb.debian.org/debian trixie/main amd64 libxcb-dri3-0 amd64 1.17.0-2 [107 kB] Get:224 http://deb.debian.org/debian trixie/main amd64 libxcb-glx0 amd64 1.17.0-2 [122 kB] Get:225 http://deb.debian.org/debian trixie/main amd64 libxcb-present0 amd64 1.17.0-2 [105 kB] Get:226 http://deb.debian.org/debian trixie/main amd64 libxcb-randr0 amd64 1.17.0-2 [116 kB] Get:227 http://deb.debian.org/debian trixie/main amd64 libxcb-sync1 amd64 1.17.0-2 [108 kB] Get:228 http://deb.debian.org/debian trixie/main amd64 libxcb-xfixes0 amd64 1.17.0-2 [109 kB] Get:229 http://deb.debian.org/debian trixie/main amd64 libxshmfence1 amd64 1.3-1+b1 [8852 B] Get:230 http://deb.debian.org/debian trixie/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b2 [20.8 kB] Get:231 http://deb.debian.org/debian trixie/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB] Get:232 http://deb.debian.org/debian trixie/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB] Get:233 http://deb.debian.org/debian trixie/main amd64 libllvm18 amd64 1:18.1.8-11 [25.0 MB] Get:234 http://deb.debian.org/debian trixie/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get:235 http://deb.debian.org/debian trixie/main amd64 libsensors5 amd64 1:3.6.0-10 [34.7 kB] Get:236 http://deb.debian.org/debian trixie/main amd64 mesa-libgallium amd64 24.2.2-1 [9058 kB] Get:237 http://deb.debian.org/debian trixie/main amd64 libvulkan1 amd64 1.3.290.0-1 [126 kB] Get:238 http://deb.debian.org/debian trixie/main amd64 libwayland-server0 amd64 1.23.0-1 [34.0 kB] Get:239 http://deb.debian.org/debian trixie/main amd64 libgbm1 amd64 24.2.2-1 [42.6 kB] Get:240 http://deb.debian.org/debian trixie/main amd64 libgl1-mesa-dri amd64 24.2.2-1 [43.7 kB] Get:241 http://deb.debian.org/debian trixie/main amd64 libglx-mesa0 amd64 24.2.2-1 [154 kB] Get:242 http://deb.debian.org/debian trixie/main amd64 libglx0 amd64 1.7.0-1+b1 [35.0 kB] Get:243 http://deb.debian.org/debian trixie/main amd64 libgl1 amd64 1.7.0-1+b1 [89.8 kB] Get:244 http://deb.debian.org/debian trixie/main amd64 libasound2-data all 1.2.12-1 [21.0 kB] Get:245 http://deb.debian.org/debian trixie/main amd64 libasound2t64 amd64 1.2.12-1 [369 kB] Get:246 http://deb.debian.org/debian trixie/main amd64 libgif7 amd64 5.2.2-1 [43.9 kB] Get:247 http://deb.debian.org/debian trixie/main amd64 libxtst6 amd64 2:1.2.3-1.1+b1 [25.9 kB] Get:248 http://deb.debian.org/debian trixie/main amd64 openjdk-21-jre amd64 21.0.5~8ea-1 [205 kB] Get:249 http://deb.debian.org/debian trixie/main amd64 default-jre amd64 2:1.21-76 [1068 B] Get:250 http://deb.debian.org/debian trixie/main amd64 libbytecode-java all 0.92.svn.20090106-2.1 [88.9 kB] Get:251 http://deb.debian.org/debian trixie/main amd64 libcommons-pool-java all 1.6-5 [109 kB] Get:252 http://deb.debian.org/debian trixie/main amd64 libcommons-dbcp-java all 1.4-8 [157 kB] Get:253 http://deb.debian.org/debian trixie/main amd64 libatinject-jsr330-api-java all 1.0+ds1-5 [5312 B] Get:254 http://deb.debian.org/debian trixie/main amd64 liberror-prone-java all 2.18.0-1 [22.5 kB] Get:255 http://deb.debian.org/debian trixie/main amd64 libjsr305-java all 0.1~+svn49-11 [26.9 kB] Get:256 http://deb.debian.org/debian trixie/main amd64 libguava-java all 32.0.1-1 [2708 kB] Get:257 http://deb.debian.org/debian trixie/main amd64 libjgraph-java all 5.12.4.2+dfsg-7 [207 kB] Get:258 http://deb.debian.org/debian trixie/main amd64 libjgrapht0.8-java all 0.8.3-6 [214 kB] Get:259 http://deb.debian.org/debian trixie/main amd64 libbiojava1.9-java all 1:1.9.7+dfsg-1 [3154 kB] Get:260 http://deb.debian.org/debian trixie/main amd64 libbiojava-java all 1:1.9.7+dfsg-1 [5512 B] Get:261 http://deb.debian.org/debian trixie/main amd64 libcommons-cli-java all 1.6.0-1 [60.4 kB] Get:262 http://deb.debian.org/debian trixie/main amd64 libcommons-collections3-java all 3.2.2-3 [530 kB] Get:263 http://deb.debian.org/debian trixie/main amd64 alien-hunter all 1.7-10 [28.5 kB] Get:264 http://deb.debian.org/debian trixie/main amd64 alsa-topology-conf all 1.2.5.1-3 [15.3 kB] Get:265 http://deb.debian.org/debian trixie/main amd64 alsa-ucm-conf all 1.2.12-1 [70.5 kB] Get:266 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get:267 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-3 [837 kB] Get:268 http://deb.debian.org/debian trixie/main amd64 libopenblas0-pthread amd64 0.3.28+ds-2 [6897 kB] Get:269 http://deb.debian.org/debian trixie/main amd64 libgslcblas0 amd64 2.8+dfsg-3 [116 kB] Get:270 http://deb.debian.org/debian trixie/main amd64 libgsl28 amd64 2.8+dfsg-3 [994 kB] Get:271 http://deb.debian.org/debian trixie/main amd64 libtamuanova-0.2 amd64 0.2-5+b3 [9228 B] Get:272 http://deb.debian.org/debian trixie/main amd64 libmath-tamuanova-perl amd64 1.0.2-4+b1 [13.9 kB] Get:273 http://deb.debian.org/debian trixie/main amd64 altree amd64 1.3.2-2+b3 [345 kB] Get:274 http://deb.debian.org/debian trixie/main amd64 amap-align amd64 2.2+git20080214.600fc29+dfsg-2 [132 kB] Get:275 http://deb.debian.org/debian trixie/main amd64 libapr1t64 amd64 1.7.5-1 [104 kB] Get:276 http://deb.debian.org/debian trixie/main amd64 libaprutil1t64 amd64 1.6.3-3 [89.3 kB] Get:277 http://deb.debian.org/debian trixie/main amd64 libaprutil1-dbd-sqlite3 amd64 1.6.3-3 [13.9 kB] Get:278 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:279 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:280 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3 [187 kB] Get:281 http://deb.debian.org/debian trixie/main amd64 libaprutil1-ldap amd64 1.6.3-3 [12.1 kB] Get:282 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.63.0-1 [74.8 kB] Get:283 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:284 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:285 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.0-7 [216 kB] Get:286 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.9.1-2 [463 kB] Get:287 http://deb.debian.org/debian trixie/main amd64 libjansson4 amd64 2.14-2+b2 [39.9 kB] Get:288 http://deb.debian.org/debian trixie/main amd64 liblua5.4-0 amd64 5.4.6-3+b1 [147 kB] Get:289 http://deb.debian.org/debian trixie/main amd64 apache2-bin amd64 2.4.62-1 [1387 kB] Get:290 http://deb.debian.org/debian trixie/main amd64 aragorn amd64 1.2.41-3 [88.0 kB] Get:291 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get:292 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get:293 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get:294 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.4.0-1 [63.7 kB] Get:295 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get:296 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.20.2-1 [10.3 kB] Get:297 http://deb.debian.org/debian trixie/main amd64 python3-importlib-metadata all 8.5.0-1 [21.0 kB] Get:298 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.3.0-1 [36.5 kB] Get:299 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get:300 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get:301 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.0.2-1 [11.7 kB] Get:302 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 74.1.2-2 [213 kB] Get:303 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB] Get:304 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b1 [29.1 kB] Get:305 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.13.1-5 [16.7 MB] Get:306 http://deb.debian.org/debian trixie/main amd64 libnghttp3-9 amd64 1.4.0-1 [63.1 kB] Get:307 http://deb.debian.org/debian trixie/main amd64 libngtcp2-16 amd64 1.6.0-1 [122 kB] Get:308 http://deb.debian.org/debian trixie/main amd64 libngtcp2-crypto-gnutls8 amd64 1.6.0-1 [19.6 kB] Get:309 http://deb.debian.org/debian trixie/main amd64 libcurl3t64-gnutls amd64 8.9.1-2 [470 kB] Get:310 http://deb.debian.org/debian trixie/main amd64 libhtscodecs2 amd64 1.6.1-1 [95.6 kB] Get:311 http://deb.debian.org/debian trixie/main amd64 libhts3t64 amd64 1.20+ds-1 [452 kB] Get:312 http://deb.debian.org/debian trixie/main amd64 python3-pysam amd64 0.22.1+ds-2+b1 [3474 kB] Get:313 http://deb.debian.org/debian trixie/main amd64 python3-htseq amd64 2.0.5-2+b1 [309 kB] Get:314 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:315 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:316 http://deb.debian.org/debian trixie/main amd64 fonts-lyx all 2.4.1-2 [189 kB] Get:317 http://deb.debian.org/debian trixie/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get:318 http://deb.debian.org/debian trixie/main amd64 python3-six all 1.16.0-7 [16.4 kB] Get:319 http://deb.debian.org/debian trixie/main amd64 python3-dateutil all 2.9.0-2 [79.4 kB] Get:320 http://deb.debian.org/debian trixie/main amd64 libimagequant0 amd64 2.18.0-1+b1 [35.3 kB] Get:321 http://deb.debian.org/debian trixie/main amd64 libraqm0 amd64 0.10.1-1+b1 [14.2 kB] Get:322 http://deb.debian.org/debian trixie/main amd64 python3-pil amd64 10.4.0-1 [502 kB] Get:323 http://deb.debian.org/debian trixie/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1 [1034 kB] Get:324 http://deb.debian.org/debian trixie/main amd64 libxft2 amd64 2.3.6-1+b1 [54.2 kB] Get:325 http://deb.debian.org/debian trixie/main amd64 libxss1 amd64 1:1.2.3-1+b1 [17.0 kB] Get:326 http://deb.debian.org/debian trixie/main amd64 libtk8.6 amd64 8.6.14-1 [784 kB] Get:327 http://deb.debian.org/debian trixie/main amd64 python3.12-tk amd64 3.12.6-1 [112 kB] Get:328 http://deb.debian.org/debian trixie/main amd64 python3.13-tk amd64 3.13.0~rc2-1 [103 kB] Get:329 http://deb.debian.org/debian trixie/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get:330 http://deb.debian.org/debian trixie/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get:331 http://deb.debian.org/debian trixie/main amd64 python3-tk amd64 3.12.6-1 [9428 B] Get:332 http://deb.debian.org/debian trixie/main amd64 python3-pil.imagetk amd64 10.4.0-1 [79.4 kB] Get:333 http://deb.debian.org/debian trixie/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get:334 http://deb.debian.org/debian trixie/main amd64 python3-contourpy amd64 1.3.0-1 [212 kB] Get:335 http://deb.debian.org/debian trixie/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get:336 http://deb.debian.org/debian trixie/main amd64 python3-brotli amd64 1.1.0-2+b4 [309 kB] Get:337 http://deb.debian.org/debian trixie/main amd64 python3-attr all 23.2.0-2 [65.5 kB] Get:338 http://deb.debian.org/debian trixie/main amd64 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get:339 http://deb.debian.org/debian trixie/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get:340 http://deb.debian.org/debian trixie/main amd64 python3-sympy all 1.13.2-1 [4147 kB] Get:341 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get:342 http://deb.debian.org/debian trixie/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get:343 http://deb.debian.org/debian trixie/main amd64 python3-fs all 2.4.16-4 [95.4 kB] Get:344 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1 [232 kB] Get:345 http://deb.debian.org/debian trixie/main amd64 python3-lxml amd64 5.3.0-1 [1251 kB] Get:346 http://deb.debian.org/debian trixie/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b4 [25.2 kB] Get:347 http://deb.debian.org/debian trixie/main amd64 python3-unicodedata2 amd64 15.1.0+ds-1+b2 [298 kB] Get:348 http://deb.debian.org/debian trixie/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get:349 http://deb.debian.org/debian trixie/main amd64 python3-fonttools amd64 4.46.0-1+b1 [1382 kB] Get:350 http://deb.debian.org/debian trixie/main amd64 python3-kiwisolver amd64 1.4.5-1+b1 [59.5 kB] Get:351 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.1-1 [45.8 kB] Get:352 http://deb.debian.org/debian trixie/main amd64 libqhull-r8.0 amd64 2020.2-6+b1 [245 kB] Get:353 http://deb.debian.org/debian trixie/main amd64 python3-matplotlib amd64 3.8.3-3 [5560 kB] Get:354 http://deb.debian.org/debian trixie/main amd64 arden all 1.0-5 [89.3 kB] Get:355 http://deb.debian.org/debian trixie/main amd64 gsettings-desktop-schemas all 47.1-1 [689 kB] Get:356 http://deb.debian.org/debian trixie/main amd64 at-spi2-core amd64 2.54.0-1 [61.2 kB] Get:357 http://deb.debian.org/debian trixie/main amd64 autodock amd64 4.2.6-9 [167 kB] Get:358 http://deb.debian.org/debian trixie/main amd64 libboost-program-options1.83.0 amd64 1.83.0-3.2 [347 kB] Get:359 http://deb.debian.org/debian trixie/main amd64 autodock-vina amd64 1.2.5-2 [267 kB] Get:360 http://deb.debian.org/debian trixie/main amd64 autogrid amd64 4.2.6-9 [47.9 kB] Get:361 http://deb.debian.org/debian trixie/main amd64 libbamtools2.5.2 amd64 2.5.2+dfsg-6 [159 kB] Get:362 http://deb.debian.org/debian trixie/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB] Get:363 http://deb.debian.org/debian trixie/main amd64 bamtools amd64 2.5.2+dfsg-6 [206 kB] Get:364 http://deb.debian.org/debian trixie/main amd64 bc amd64 1.07.1-4 [103 kB] Get:365 http://deb.debian.org/debian trixie/main amd64 libgatbcore3 amd64 1.4.2+dfsg-13+b1 [1802 kB] Get:366 http://deb.debian.org/debian trixie/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get:367 http://deb.debian.org/debian trixie/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get:368 http://deb.debian.org/debian trixie/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB] Get:369 http://deb.debian.org/debian trixie/main amd64 bcalm amd64 2.2.3-5+b1 [35.4 kB] Get:370 http://deb.debian.org/debian trixie/main amd64 bcftools amd64 1.20-2 [760 kB] Get:371 http://deb.debian.org/debian trixie/main amd64 bedtools amd64 2.31.1+dfsg-2 [678 kB] Get:372 http://deb.debian.org/debian trixie/main amd64 binutils-common amd64 2.43.1-3 [2633 kB] Get:373 http://deb.debian.org/debian trixie/main amd64 libsframe1 amd64 2.43.1-3 [77.0 kB] Get:374 http://deb.debian.org/debian trixie/main amd64 libbinutils amd64 2.43.1-3 [528 kB] Get:375 http://deb.debian.org/debian trixie/main amd64 libctf-nobfd0 amd64 2.43.1-3 [154 kB] Get:376 http://deb.debian.org/debian trixie/main amd64 libctf0 amd64 2.43.1-3 [88.2 kB] Get:377 http://deb.debian.org/debian trixie/main amd64 libgprofng0 amd64 2.43.1-3 [797 kB] Get:378 http://deb.debian.org/debian trixie/main amd64 binutils-x86-64-linux-gnu amd64 2.43.1-3 [2254 kB] Get:379 http://deb.debian.org/debian trixie/main amd64 binutils amd64 2.43.1-3 [67.7 kB] Get:380 http://deb.debian.org/debian trixie/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:381 http://deb.debian.org/debian trixie/main amd64 libdata-stag-perl all 0.14-3 [448 kB] Get:382 http://deb.debian.org/debian trixie/main amd64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get:383 http://deb.debian.org/debian trixie/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:384 http://deb.debian.org/debian trixie/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:385 http://deb.debian.org/debian trixie/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:386 http://deb.debian.org/debian trixie/main amd64 libtest-deep-perl all 1.204-1 [52.9 kB] Get:387 http://deb.debian.org/debian trixie/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:388 http://deb.debian.org/debian trixie/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get:389 http://deb.debian.org/debian trixie/main amd64 libtext-diff-perl all 1.45-2 [27.2 kB] Get:390 http://deb.debian.org/debian trixie/main amd64 libtest-differences-perl all 0.71-1 [17.9 kB] Get:391 http://deb.debian.org/debian trixie/main amd64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get:392 http://deb.debian.org/debian trixie/main amd64 libtest-exception-perl all 0.43-3 [16.9 kB] Get:393 http://deb.debian.org/debian trixie/main amd64 libtest-warn-perl all 0.37-2 [14.5 kB] Get:394 http://deb.debian.org/debian trixie/main amd64 libtest-most-perl all 0.38-1 [25.1 kB] Get:395 http://deb.debian.org/debian trixie/main amd64 bioperl all 1.7.8-1 [246 kB] Get:396 http://deb.debian.org/debian trixie/main amd64 libio-pty-perl amd64 1:1.20-1+b1 [34.4 kB] Get:397 http://deb.debian.org/debian trixie/main amd64 libipc-run-perl all 20231003.0-2 [101 kB] Get:398 http://deb.debian.org/debian trixie/main amd64 libfile-sort-perl all 1.01-3 [21.3 kB] Get:399 http://deb.debian.org/debian trixie/main amd64 libbio-perl-run-perl all 1.7.3-11 [528 kB] Get:400 http://deb.debian.org/debian trixie/main amd64 libfile-slurp-tiny-perl all 0.004-2 [7592 B] Get:401 http://deb.debian.org/debian trixie/main amd64 libtree-dagnode-perl all 1.32-1 [61.7 kB] Get:402 http://deb.debian.org/debian trixie/main amd64 libencode-perl amd64 3.21-1+b1 [1411 kB] Get:403 http://deb.debian.org/debian trixie/main amd64 liburi-perl all 5.29-1 [103 kB] Get:404 http://deb.debian.org/debian trixie/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:405 http://deb.debian.org/debian trixie/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:406 http://deb.debian.org/debian trixie/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:407 http://deb.debian.org/debian trixie/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:408 http://deb.debian.org/debian trixie/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:409 http://deb.debian.org/debian trixie/main amd64 libhtml-parser-perl amd64 3.83-1 [99.4 kB] Get:410 http://deb.debian.org/debian trixie/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:411 http://deb.debian.org/debian trixie/main amd64 libclone-perl amd64 0.47-1 [13.5 kB] Get:412 http://deb.debian.org/debian trixie/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:413 http://deb.debian.org/debian trixie/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:414 http://deb.debian.org/debian trixie/main amd64 libhttp-message-perl all 6.46-1 [79.7 kB] Get:415 http://deb.debian.org/debian trixie/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:416 http://deb.debian.org/debian trixie/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:417 http://deb.debian.org/debian trixie/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:418 http://deb.debian.org/debian trixie/main amd64 libnet-ssleay-perl amd64 1.94-1+b1 [339 kB] Get:419 http://deb.debian.org/debian trixie/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:420 http://deb.debian.org/debian trixie/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:421 http://deb.debian.org/debian trixie/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:422 http://deb.debian.org/debian trixie/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:423 http://deb.debian.org/debian trixie/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:424 http://deb.debian.org/debian trixie/main amd64 libwww-perl all 6.77-1 [183 kB] Get:425 http://deb.debian.org/debian trixie/main amd64 libxml-parser-perl amd64 2.47-1+b2 [199 kB] Get:426 http://deb.debian.org/debian trixie/main amd64 libxml-perl all 0.08-4 [93.0 kB] Get:427 http://deb.debian.org/debian trixie/main amd64 libxml-regexp-perl all 0.04-1.1 [7500 B] Get:428 http://deb.debian.org/debian trixie/main amd64 libxml-dom-perl all 1.46-2 [152 kB] Get:429 http://deb.debian.org/debian trixie/main amd64 libxml-xpathengine-perl all 0.14-2 [33.5 kB] Get:430 http://deb.debian.org/debian trixie/main amd64 libxml-dom-xpath-perl all 0.14-4 [9352 B] Get:431 http://deb.debian.org/debian trixie/main amd64 libbio-featureio-perl all 1.6.905-2 [53.2 kB] Get:432 http://deb.debian.org/debian trixie/main amd64 libxml-twig-perl all 1:3.52-3 [177 kB] Get:433 http://deb.debian.org/debian trixie/main amd64 libxml-writer-perl all 0.900-2 [26.8 kB] Get:434 http://deb.debian.org/debian trixie/main amd64 libbio-variation-perl all 1.7.5-3 [72.6 kB] Get:435 http://deb.debian.org/debian trixie/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:436 http://deb.debian.org/debian trixie/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:437 http://deb.debian.org/debian trixie/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:438 http://deb.debian.org/debian trixie/main amd64 libbio-cluster-perl all 1.7.3-6 [53.3 kB] Get:439 http://deb.debian.org/debian trixie/main amd64 libtest-requiresinternet-perl all 0.05-4 [6864 B] Get:440 http://deb.debian.org/debian trixie/main amd64 libbio-asn1-entrezgene-perl all 1.730-3 [46.3 kB] Get:441 http://deb.debian.org/debian trixie/main amd64 libtext-csv-perl all 2.04-1 [112 kB] Get:442 http://deb.debian.org/debian trixie/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b3 [313 kB] Get:443 http://deb.debian.org/debian trixie/main amd64 libxml-sax-expat-perl all 0.51-2 [11.1 kB] Get:444 http://deb.debian.org/debian trixie/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:445 http://deb.debian.org/debian trixie/main amd64 libbio-eutilities-perl all 1.77-2 [124 kB] Get:446 http://deb.debian.org/debian trixie/main amd64 libbio-tools-run-remoteblast-perl all 1.7.3-3 [17.5 kB] Get:447 http://deb.debian.org/debian trixie/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:448 http://deb.debian.org/debian trixie/main amd64 libfcgi0t64 amd64 2.4.2-2.1 [24.6 kB] Get:449 http://deb.debian.org/debian trixie/main amd64 libfcgi-perl amd64 0.82+ds-3+b1 [25.4 kB] Get:450 http://deb.debian.org/debian trixie/main amd64 libhttp-daemon-perl all 6.16-1 [23.5 kB] Get:451 http://deb.debian.org/debian trixie/main amd64 libio-sessiondata-perl all 1.03-3 [6316 B] Get:452 http://deb.debian.org/debian trixie/main amd64 libio-stringy-perl all 2.113-2 [48.3 kB] Get:453 http://deb.debian.org/debian trixie/main amd64 libconvert-binhex-perl all 1.125-3 [27.4 kB] Get:454 http://deb.debian.org/debian trixie/main amd64 libnet-smtp-ssl-perl all 1.04-2 [6548 B] Get:455 http://deb.debian.org/debian trixie/main amd64 libmailtools-perl all 2.21-3 [88.6 kB] Get:456 http://deb.debian.org/debian trixie/main amd64 libmime-tools-perl all 5.515-1 [203 kB] Get:457 http://deb.debian.org/debian trixie/main amd64 libtask-weaken-perl all 1.06-2 [9364 B] Get:458 http://deb.debian.org/debian trixie/main amd64 libsoap-lite-perl all 1.27-3 [239 kB] Get:459 http://deb.debian.org/debian trixie/main amd64 openjdk-21-jdk-headless amd64 21.0.5~8ea-1 [82.8 MB] Get:460 http://deb.debian.org/debian trixie/main amd64 default-jdk-headless amd64 2:1.21-76 [1124 B] Get:461 http://deb.debian.org/debian trixie/main amd64 bioperl-run all 1.7.3-11 [36.1 kB] Get:462 http://deb.debian.org/debian trixie/main amd64 libsquid1t64 amd64 1.9g+cvs20050121-15.1 [76.1 kB] Get:463 http://deb.debian.org/debian trixie/main amd64 biosquid amd64 1.9g+cvs20050121-15.1 [79.1 kB] Get:464 http://deb.debian.org/debian trixie/main amd64 menu amd64 2.1.50 [346 kB] Get:465 http://deb.debian.org/debian trixie/main amd64 blends-common all 0.7.7 [14.8 kB] Get:466 http://deb.debian.org/debian trixie/main amd64 bowtie amd64 1.3.1-3 [1627 kB] Get:467 http://deb.debian.org/debian trixie/main amd64 bowtie2 amd64 2.5.4-1 [1510 kB] Get:468 http://deb.debian.org/debian trixie/main amd64 boxshade amd64 3.3.1-14 [55.8 kB] Get:469 http://deb.debian.org/debian trixie/main amd64 libc-dev-bin amd64 2.40-2 [51.8 kB] Get:470 http://deb.debian.org/debian trixie/main amd64 linux-libc-dev all 6.10.9-1 [2388 kB] Get:471 http://deb.debian.org/debian trixie/main amd64 libcrypt-dev amd64 1:4.4.36-5 [118 kB] Get:472 http://deb.debian.org/debian trixie/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Get:473 http://deb.debian.org/debian trixie/main amd64 libc6-dev amd64 2.40-2 [1932 kB] Get:474 http://deb.debian.org/debian trixie/main amd64 libisl23 amd64 0.27-1 [659 kB] Get:475 http://deb.debian.org/debian trixie/main amd64 libmpc3 amd64 1.3.1-1+b2 [52.1 kB] Get:476 http://deb.debian.org/debian trixie/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-3 [11.1 MB] Get:477 http://deb.debian.org/debian trixie/main amd64 cpp-14 amd64 14.2.0-3 [1272 B] Get:478 http://deb.debian.org/debian trixie/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2 [4784 B] Get:479 http://deb.debian.org/debian trixie/main amd64 cpp amd64 4:14.1.0-2 [1568 B] Get:480 http://deb.debian.org/debian trixie/main amd64 libcc1-0 amd64 14.2.0-3 [42.9 kB] Get:481 http://deb.debian.org/debian trixie/main amd64 libitm1 amd64 14.2.0-3 [25.9 kB] Get:482 http://deb.debian.org/debian trixie/main amd64 libasan8 amd64 14.2.0-3 [2728 kB] Get:483 http://deb.debian.org/debian trixie/main amd64 liblsan0 amd64 14.2.0-3 [1205 kB] Get:484 http://deb.debian.org/debian trixie/main amd64 libtsan2 amd64 14.2.0-3 [2461 kB] Get:485 http://deb.debian.org/debian trixie/main amd64 libubsan1 amd64 14.2.0-3 [1075 kB] Get:486 http://deb.debian.org/debian trixie/main amd64 libhwasan0 amd64 14.2.0-3 [1488 kB] Get:487 http://deb.debian.org/debian trixie/main amd64 libquadmath0 amd64 14.2.0-3 [145 kB] Get:488 http://deb.debian.org/debian trixie/main amd64 libgcc-14-dev amd64 14.2.0-3 [2671 kB] Get:489 http://deb.debian.org/debian trixie/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-3 [21.4 MB] Get:490 http://deb.debian.org/debian trixie/main amd64 gcc-14 amd64 14.2.0-3 [522 kB] Get:491 http://deb.debian.org/debian trixie/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2 [1436 B] Get:492 http://deb.debian.org/debian trixie/main amd64 gcc amd64 4:14.1.0-2 [5136 B] Get:493 http://deb.debian.org/debian trixie/main amd64 libstdc++-14-dev amd64 14.2.0-3 [2365 kB] Get:494 http://deb.debian.org/debian trixie/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-3 [12.1 MB] Get:495 http://deb.debian.org/debian trixie/main amd64 g++-14 amd64 14.2.0-3 [19.1 kB] Get:496 http://deb.debian.org/debian trixie/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2 [1204 B] Get:497 http://deb.debian.org/debian trixie/main amd64 g++ amd64 4:14.1.0-2 [1344 B] Get:498 http://deb.debian.org/debian trixie/main amd64 libdpkg-perl all 1.22.11 [644 kB] Get:499 http://deb.debian.org/debian trixie/main amd64 patch amd64 2.7.6-7 [128 kB] Get:500 http://deb.debian.org/debian trixie/main amd64 dpkg-dev all 1.22.11 [1332 kB] Get:501 http://deb.debian.org/debian trixie/main amd64 build-essential amd64 12.10 [4516 B] Get:502 http://deb.debian.org/debian trixie/main amd64 bwa amd64 0.7.18-1 [212 kB] Get:503 http://deb.debian.org/debian trixie/main amd64 bzip2-doc all 1.0.8-6 [505 kB] Get:504 http://deb.debian.org/debian trixie/main amd64 libboost-serialization1.83.0 amd64 1.83.0-3.2 [333 kB] Get:505 http://deb.debian.org/debian trixie/main amd64 libgflags2.2 amd64 2.2.2-2 [83.5 kB] Get:506 http://deb.debian.org/debian trixie/main amd64 libunwind8 amd64 1.6.2-3.1 [51.5 kB] Get:507 http://deb.debian.org/debian trixie/main amd64 libgoogle-glog0v6t64 amd64 0.6.0-2.1 [66.1 kB] Get:508 http://deb.debian.org/debian trixie/main amd64 libcassie1v5 amd64 1.0.9-4+b1 [41.7 kB] Get:509 http://deb.debian.org/debian trixie/main amd64 cassiopee amd64 1.0.9-4+b1 [17.6 kB] Get:510 http://deb.debian.org/debian trixie/main amd64 cd-hit amd64 4.8.1-4 [522 kB] Get:511 http://deb.debian.org/debian trixie/main amd64 libgclib3 amd64 0.12.7+ds-5+b1 [154 kB] Get:512 http://deb.debian.org/debian trixie/main amd64 cdbfasta amd64 1.00+git20230710.da8f5ba+dfsg-1 [128 kB] Get:513 http://deb.debian.org/debian trixie/main amd64 fonts-circos-symbols all 0.69.9+dfsg-2 [46.7 kB] Get:514 http://deb.debian.org/debian trixie/main amd64 fonts-cmu all 0.7.0-5 [4892 kB] Get:515 http://deb.debian.org/debian trixie/main amd64 libregexp-common-perl all 2024080801-1 [167 kB] Get:516 http://deb.debian.org/debian trixie/main amd64 libcarp-always-perl all 0.16-1 [9620 B] Get:517 http://deb.debian.org/debian trixie/main amd64 libconfig-general-perl all 2.65-2 [71.8 kB] Get:518 http://deb.debian.org/debian trixie/main amd64 libdata-dumper-simple-perl all 0.11-7 [12.5 kB] Get:519 http://deb.debian.org/debian trixie/main amd64 libaom3 amd64 3.9.1-1 [1864 kB] Get:520 http://deb.debian.org/debian trixie/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get:521 http://deb.debian.org/debian trixie/main amd64 libgav1-1 amd64 0.19.0-2+b1 [351 kB] Get:522 http://deb.debian.org/debian trixie/main amd64 librav1e0.7 amd64 0.7.1-7+b1 [921 kB] Get:523 http://deb.debian.org/debian trixie/main amd64 libsvtav1enc2 amd64 2.1.0+dfsg-2 [2152 kB] Get:524 http://deb.debian.org/debian trixie/main amd64 libyuv0 amd64 0.0.1888.20240710-3 [170 kB] Get:525 http://deb.debian.org/debian trixie/main amd64 libavif16 amd64 1.1.0-3 [115 kB] Get:526 http://deb.debian.org/debian trixie/main amd64 libxpm4 amd64 1:3.5.17-1+b1 [56.1 kB] Get:527 http://deb.debian.org/debian trixie/main amd64 libgd3 amd64 2.3.3-12 [125 kB] Get:528 http://deb.debian.org/debian trixie/main amd64 libgd-perl amd64 2.78-1+b2 [131 kB] Get:529 http://deb.debian.org/debian trixie/main amd64 libgetopt-simple-perl all 1.52-7 [15.5 kB] Get:530 http://deb.debian.org/debian trixie/main amd64 libmath-bezier-perl all 0.01-4 [7032 B] Get:531 http://deb.debian.org/debian trixie/main amd64 libmath-round-perl all 0.08-1 [9172 B] Get:532 http://deb.debian.org/debian trixie/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b1 [10.6 kB] Get:533 http://deb.debian.org/debian trixie/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get:534 http://deb.debian.org/debian trixie/main amd64 libdevel-callchecker-perl amd64 0.009-1 [15.9 kB] Get:535 http://deb.debian.org/debian trixie/main amd64 libparams-classify-perl amd64 0.015-2+b3 [22.4 kB] Get:536 http://deb.debian.org/debian trixie/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:537 http://deb.debian.org/debian trixie/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:538 http://deb.debian.org/debian trixie/main amd64 libparams-validate-perl amd64 1.31-2+b2 [63.7 kB] Get:539 http://deb.debian.org/debian trixie/main amd64 libreadonly-perl all 2.050-3 [23.1 kB] Get:540 http://deb.debian.org/debian trixie/main amd64 libset-intspan-perl all 1.19-3 [25.3 kB] Get:541 http://deb.debian.org/debian trixie/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:542 http://deb.debian.org/debian trixie/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:543 http://deb.debian.org/debian trixie/main amd64 liblist-allutils-perl all 0.19-1 [42.0 kB] Get:544 http://deb.debian.org/debian trixie/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:545 http://deb.debian.org/debian trixie/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:546 http://deb.debian.org/debian trixie/main amd64 libmath-vec-perl all 1.01-5 [17.1 kB] Get:547 http://deb.debian.org/debian trixie/main amd64 libspiffy-perl all 0.46-1 [25.7 kB] Get:548 http://deb.debian.org/debian trixie/main amd64 libio-all-perl all 0.87-2 [67.3 kB] Get:549 http://deb.debian.org/debian trixie/main amd64 libmath-vecstat-perl all 0.08-3 [8408 B] Get:550 http://deb.debian.org/debian trixie/main amd64 libgraphics-colornames-perl all 3.5.0-3.1 [29.0 kB] Get:551 http://deb.debian.org/debian trixie/main amd64 libgraphics-colorobject-perl all 0.5.0-10.1 [28.1 kB] Get:552 http://deb.debian.org/debian trixie/main amd64 libtext-format-perl all 0.63-1 [19.5 kB] Get:553 http://deb.debian.org/debian trixie/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:554 http://deb.debian.org/debian trixie/main amd64 libnumber-format-perl all 1.76-1 [29.4 kB] Get:555 http://deb.debian.org/debian trixie/main amd64 libstatistics-basic-perl all 1.6611-3 [61.5 kB] Get:556 http://deb.debian.org/debian trixie/main amd64 libsvg-perl all 2.87-1 [64.3 kB] Get:557 http://deb.debian.org/debian trixie/main amd64 circos all 0.69.9+dfsg-2 [14.0 MB] Get:558 http://deb.debian.org/debian trixie/main amd64 circos-tools all 0.23-1 [18.7 MB] Get:559 http://deb.debian.org/debian trixie/main amd64 clearcut amd64 1.0.9+git20211013.b799afe-1 [285 kB] Get:560 http://deb.debian.org/debian trixie/main amd64 clonalframe amd64 1.2-11+b3 [52.7 kB] Get:561 http://deb.debian.org/debian trixie/main amd64 libargtable2-0 amd64 13-2 [17.6 kB] Get:562 http://deb.debian.org/debian trixie/main amd64 clustalo amd64 1.2.4-8 [267 kB] Get:563 http://deb.debian.org/debian trixie/main amd64 clustalw amd64 2.1+lgpl-7 [282 kB] Get:564 http://deb.debian.org/debian trixie/main amd64 concavity amd64 0.1+dfsg.1-5 [244 kB] Get:565 http://deb.debian.org/debian trixie/main amd64 conservation-code all 20110309.0-8 [24.1 kB] Get:566 http://deb.debian.org/debian trixie/main amd64 datamash amd64 1.8-1 [350 kB] Get:567 http://deb.debian.org/debian trixie/main amd64 dialign amd64 2.2.1-13 [138 kB] Get:568 http://deb.debian.org/debian trixie/main amd64 dialign-tx-data all 1.0.2-15 [862 kB] Get:569 http://deb.debian.org/debian trixie/main amd64 dialign-tx amd64 1.0.2-15 [87.6 kB] Get:570 http://deb.debian.org/debian trixie/main amd64 libtext-iconv-perl amd64 1.7-8+b3 [14.4 kB] Get:571 http://deb.debian.org/debian trixie/main amd64 emacsen-common all 3.0.5 [12.3 kB] Get:572 http://deb.debian.org/debian trixie/main amd64 dictionaries-common all 1.29.7 [184 kB] Get:573 http://deb.debian.org/debian trixie/main amd64 libassuan9 amd64 3.0.1-2 [60.6 kB] Get:574 http://deb.debian.org/debian trixie/main amd64 gpgconf amd64 2.2.43-8+b1 [120 kB] Get:575 http://deb.debian.org/debian trixie/main amd64 libksba8 amd64 1.6.7-2 [132 kB] Get:576 http://deb.debian.org/debian trixie/main amd64 libnpth0t64 amd64 1.6-3.1 [17.9 kB] Get:577 http://deb.debian.org/debian trixie/main amd64 dirmngr amd64 2.2.43-8+b1 [367 kB] Get:578 http://deb.debian.org/debian trixie/main amd64 libcppunit-1.15-0 amd64 1.15.1-4+b1 [151 kB] Get:579 http://deb.debian.org/debian trixie/main amd64 gatb-core amd64 1.4.2+dfsg-13+b1 [2572 kB] Get:580 http://deb.debian.org/debian trixie/main amd64 discosnp amd64 1:2.6.2-3+b1 [1456 kB] Get:581 http://deb.debian.org/debian trixie/main amd64 disulfinder-data all 1.2.11-12 [1127 kB] Get:582 http://deb.debian.org/debian trixie/main amd64 disulfinder amd64 1.2.11-12 [239 kB] Get:583 http://deb.debian.org/debian trixie/main amd64 libdevmapper1.02.1 amd64 2:1.02.196-1+b1 [134 kB] Get:584 http://deb.debian.org/debian trixie/main amd64 dmsetup amd64 2:1.02.196-1+b1 [82.6 kB] Get:585 http://deb.debian.org/debian trixie/main amd64 dnaclust amd64 3-7+b3 [115 kB] Get:586 http://deb.debian.org/debian trixie/main amd64 xml-core all 0.19 [20.1 kB] Get:587 http://deb.debian.org/debian trixie/main amd64 docutils-common all 0.21.2+dfsg-2 [128 kB] Get:588 http://deb.debian.org/debian trixie/main amd64 libcifpp-data all 5.0.7.1-3 [452 kB] Get:589 http://deb.debian.org/debian trixie/main amd64 libcifpp5 amd64 5.0.7.1-3+b1 [870 kB] Get:590 http://deb.debian.org/debian trixie/main amd64 dssp amd64 4.2.2-2 [624 kB] Get:591 http://deb.debian.org/debian trixie/main amd64 libgs-common all 10.04.0~dfsg-1 [148 kB] Get:592 http://deb.debian.org/debian trixie/main amd64 libgs10-common all 10.04.0~dfsg-1 [474 kB] Get:593 http://deb.debian.org/debian trixie/main amd64 libidn12 amd64 1.42-2 [80.4 kB] Get:594 http://deb.debian.org/debian trixie/main amd64 libijs-0.35 amd64 0.35-15.1+b1 [15.1 kB] Get:595 http://deb.debian.org/debian trixie/main amd64 libjbig2dec0 amd64 0.20-1+b2 [64.3 kB] Get:596 http://deb.debian.org/debian trixie/main amd64 libpaper1 amd64 1.1.29+b1 [12.9 kB] Get:597 http://deb.debian.org/debian trixie/main amd64 libice6 amd64 2:1.0.10-1+b1 [56.7 kB] Get:598 http://deb.debian.org/debian trixie/main amd64 libsm6 amd64 2:1.2.3-1+b1 [33.6 kB] Get:599 http://deb.debian.org/debian trixie/main amd64 libxt6t64 amd64 1:1.2.1-1.2 [187 kB] Get:600 http://deb.debian.org/debian trixie/main amd64 libgs10 amd64 10.04.0~dfsg-1 [2563 kB] Get:601 http://deb.debian.org/debian trixie/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-4 [157 kB] Get:602 http://deb.debian.org/debian trixie/main amd64 libpotrace0 amd64 1.16-2+b1 [25.2 kB] Get:603 http://deb.debian.org/debian trixie/main amd64 libwoff1 amd64 1.0.2-2+b1 [44.4 kB] Get:604 http://deb.debian.org/debian trixie/main amd64 dvisvgm amd64 3.4.1+ds-1 [1119 kB] Get:605 http://deb.debian.org/debian trixie/main amd64 libhpdf-2.3.0 amd64 2.3.0+dfsg-1+b2 [346 kB] Get:606 http://deb.debian.org/debian trixie/main amd64 mysql-common all 5.8+1.1.1 [6784 B] Get:607 http://deb.debian.org/debian trixie/main amd64 mariadb-common all 1:11.4.3-1 [27.1 kB] Get:608 http://deb.debian.org/debian trixie/main amd64 libmariadb3 amd64 1:11.4.3-1 [181 kB] Get:609 http://deb.debian.org/debian trixie/main amd64 libpq5 amd64 17~rc1-1 [220 kB] Get:610 http://deb.debian.org/debian trixie/main amd64 emboss-lib amd64 6.6.0+dfsg-15 [2874 kB] Get:611 http://deb.debian.org/debian trixie/main amd64 embassy-domainatrix amd64 0.1.660-5 [61.8 kB] Get:612 http://deb.debian.org/debian trixie/main amd64 embassy-domalign amd64 0.1.660-5 [67.5 kB] Get:613 http://deb.debian.org/debian trixie/main amd64 embassy-domsearch amd64 1:0.1.660-4 [61.1 kB] Get:614 http://deb.debian.org/debian trixie/main amd64 emboss-data all 6.6.0+dfsg-15 [61.1 MB] Get:615 http://deb.debian.org/debian trixie/main amd64 emboss amd64 6.6.0+dfsg-15 [1072 kB] Get:616 http://deb.debian.org/debian trixie/main amd64 exonerate amd64 2.4.0-5+b1 [1963 kB] Get:617 http://deb.debian.org/debian trixie/main amd64 libfakeroot amd64 1.36-1 [29.1 kB] Get:618 http://deb.debian.org/debian trixie/main amd64 fakeroot amd64 1.36-1 [75.1 kB] Get:619 http://deb.debian.org/debian trixie/main amd64 fastdnaml amd64 1.2.2-17 [59.4 kB] Get:620 http://deb.debian.org/debian trixie/main amd64 fastlink amd64 4.1P-fix100+dfsg-5 [256 kB] Get:621 http://deb.debian.org/debian trixie/main amd64 libcommons-math3-java all 3.6.1-3 [2018 kB] Get:622 http://deb.debian.org/debian trixie/main amd64 libjbzip2-java all 0.9.1-8 [42.7 kB] Get:623 http://deb.debian.org/debian trixie/main amd64 libapache-pom-java all 29-2 [5276 B] Get:624 http://deb.debian.org/debian trixie/main amd64 libcommons-parent-java all 56-1 [10.8 kB] Get:625 http://deb.debian.org/debian trixie/main amd64 libcommons-compress-java all 1.25.0-1 [635 kB] Get:626 http://deb.debian.org/debian trixie/main amd64 libcommons-logging-java all 1.3.0-1 [68.6 kB] Get:627 http://deb.debian.org/debian trixie/main amd64 libcommons-jexl2-java all 2.1.1-6 [256 kB] Get:628 http://deb.debian.org/debian trixie/main amd64 libmjson-java all 1.4.0-3 [60.4 kB] Get:629 http://deb.debian.org/debian trixie/main amd64 libmbedcrypto7t64 amd64 2.28.8-1 [284 kB] Get:630 http://deb.debian.org/debian trixie/main amd64 libmbedx509-1t64 amd64 2.28.8-1 [131 kB] Get:631 http://deb.debian.org/debian trixie/main amd64 libmbedtls14t64 amd64 2.28.8-1 [167 kB] Get:632 http://deb.debian.org/debian trixie/main amd64 ncbi-vdb-data all 3.0.2+dfsg-2 [73.3 kB] Get:633 http://deb.debian.org/debian trixie/main amd64 libncbi-vdb3 amd64 3.0.2+dfsg-2+b1 [1049 kB] Get:634 http://deb.debian.org/debian trixie/main amd64 libncbi-ngs3 amd64 3.0.3+dfsg-9 [155 kB] Get:635 http://deb.debian.org/debian trixie/main amd64 libngs-jni amd64 3.0.3+dfsg-9 [23.8 kB] Get:636 http://deb.debian.org/debian trixie/main amd64 libngs-java amd64 3.0.3+dfsg-9 [110 kB] Get:637 http://deb.debian.org/debian trixie/main amd64 librhino-java all 1.7.14-2.1 [1357 kB] Get:638 http://deb.debian.org/debian trixie/main amd64 libsnappy1v5 amd64 1.2.1-1 [29.1 kB] Get:639 http://deb.debian.org/debian trixie/main amd64 libsnappy-jni amd64 1.1.10.5-2 [6396 B] Get:640 http://deb.debian.org/debian trixie/main amd64 libsnappy-java all 1.1.10.5-2 [87.5 kB] Get:641 http://deb.debian.org/debian trixie/main amd64 libhtsjdk-java all 4.1.0+dfsg-2 [1833 kB] Get:642 http://deb.debian.org/debian trixie/main amd64 libfindbin-libs-perl all 3.0.2-1 [29.7 kB] Get:643 http://deb.debian.org/debian trixie/main amd64 fastqc all 0.12.1+dfsg-4 [398 kB] Get:644 http://deb.debian.org/debian trixie/main amd64 fasttree amd64 2.1.11-2 [181 kB] Get:645 http://deb.debian.org/debian trixie/main amd64 fitgcp all 0.0.20150429-5 [3676 kB] Get:646 http://deb.debian.org/debian trixie/main amd64 libtbbmalloc2 amd64 2021.12.0-1 [48.9 kB] Get:647 http://deb.debian.org/debian trixie/main amd64 libtbbbind-2-5 amd64 2021.12.0-1 [14.4 kB] Get:648 http://deb.debian.org/debian trixie/main amd64 libtbb12 amd64 2021.12.0-1 [87.8 kB] Get:649 http://deb.debian.org/debian trixie/main amd64 flexbar amd64 1:3.5.0-5 [356 kB] Get:650 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-extra all 2.37-8 [1792 kB] Get:651 http://deb.debian.org/debian trixie/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get:652 http://deb.debian.org/debian trixie/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get:653 http://deb.debian.org/debian trixie/main amd64 fonts-liberation-sans-narrow all 1:1.07.6-4 [182 kB] Get:654 http://deb.debian.org/debian trixie/main amd64 fonts-lmodern all 2.005-1 [4540 kB] Get:655 http://deb.debian.org/debian trixie/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get:656 http://deb.debian.org/debian trixie/main amd64 fonts-noto-mono all 20201225-2 [398 kB] Get:657 http://deb.debian.org/debian trixie/main amd64 libfreecontact0t64 amd64 1.0.21-14 [83.5 kB] Get:658 http://deb.debian.org/debian trixie/main amd64 libxerces-c3.2t64 amd64 3.2.4+debian-1.3 [886 kB] Get:659 http://deb.debian.org/debian trixie/main amd64 freecontact amd64 1.0.21-14 [381 kB] Get:660 http://deb.debian.org/debian trixie/main amd64 mummer amd64 3.23+dfsg-8 [662 kB] Get:661 http://deb.debian.org/debian trixie/main amd64 fsa amd64 1.15.9+dfsg-6 [700 kB] Get:662 http://deb.debian.org/debian trixie/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get:663 http://deb.debian.org/debian trixie/main amd64 python3-cairo amd64 1.26.1-2 [114 kB] Get:664 http://deb.debian.org/debian trixie/main amd64 python3-freetype all 2.5.1-1 [89.3 kB] Get:665 http://deb.debian.org/debian trixie/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B] Get:666 http://deb.debian.org/debian trixie/main amd64 python3-reportlab all 4.2.2-1 [1150 kB] Get:667 http://deb.debian.org/debian trixie/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get:668 http://deb.debian.org/debian trixie/main amd64 python3-biopython amd64 1.83+dfsg1-5 [1608 kB] Get:669 http://deb.debian.org/debian trixie/main amd64 seqan-apps amd64 2.4.0+dfsg-16 [12.3 MB] Get:670 http://deb.debian.org/debian trixie/main amd64 gasic all 0.0.r19-8 [20.6 kB] Get:671 http://deb.debian.org/debian trixie/main amd64 gdal-data all 3.9.2+dfsg-1 [563 kB] Get:672 http://deb.debian.org/debian trixie/main amd64 gdal-plugins amd64 3.9.2+dfsg-1+b1 [341 kB] Get:673 http://deb.debian.org/debian trixie/main amd64 liblua5.1-0 amd64 5.1.5-9+b2 [109 kB] Get:674 http://deb.debian.org/debian trixie/main amd64 libtre5 amd64 0.8.0-8 [60.5 kB] Get:675 http://deb.debian.org/debian trixie/main amd64 lua-filesystem amd64 1.8.0-3+b1 [11.9 kB] Get:676 http://deb.debian.org/debian trixie/main amd64 lua-lpeg amd64 1.0.2-2+b1 [37.2 kB] Get:677 http://deb.debian.org/debian trixie/main amd64 lua-md5 amd64 1.2+git+1+8d87fee-2+b1 [13.6 kB] Get:678 http://deb.debian.org/debian trixie/main amd64 genometools-common all 1.6.5+ds-2.2 [195 kB] Get:679 http://deb.debian.org/debian trixie/main amd64 genometools amd64 1.6.5+ds-2.2 [1656 kB] Get:680 http://deb.debian.org/debian trixie/main amd64 gff2aplot amd64 2.0-15 [244 kB] Get:681 http://deb.debian.org/debian trixie/main amd64 gff2ps all 0.98l-6 [60.4 kB] Get:682 http://deb.debian.org/debian trixie/main amd64 libgfortran-14-dev amd64 14.2.0-3 [880 kB] Get:683 http://deb.debian.org/debian trixie/main amd64 gfortran-14-x86-64-linux-gnu amd64 14.2.0-3 [11.7 MB] Get:684 http://deb.debian.org/debian trixie/main amd64 gfortran-14 amd64 14.2.0-3 [11.8 kB] Get:685 http://deb.debian.org/debian trixie/main amd64 gfortran-x86-64-linux-gnu amd64 4:14.1.0-2 [1284 B] Get:686 http://deb.debian.org/debian trixie/main amd64 gfortran amd64 4:14.1.0-2 [1436 B] Get:687 http://deb.debian.org/debian trixie/main amd64 ghostscript amd64 10.04.0~dfsg-1 [50.3 kB] Get:688 http://deb.debian.org/debian trixie/main amd64 glam2 amd64 1064-9 [236 kB] Get:689 http://deb.debian.org/debian trixie/main amd64 gmap amd64 2024-08-20+ds-1 [34.7 MB] Get:690 http://deb.debian.org/debian trixie/main amd64 gnupg-l10n all 2.2.43-8 [696 kB] Get:691 http://deb.debian.org/debian trixie/main amd64 gpg amd64 2.2.43-8+b1 [527 kB] Get:692 http://deb.debian.org/debian trixie/main amd64 pinentry-curses amd64 1.2.1-4+b1 [79.7 kB] Get:693 http://deb.debian.org/debian trixie/main amd64 gpg-agent amd64 2.2.43-8+b1 [250 kB] Get:694 http://deb.debian.org/debian trixie/main amd64 gpgsm amd64 2.2.43-8+b1 [252 kB] Get:695 http://deb.debian.org/debian trixie/main amd64 gnupg all 2.2.43-8 [375 kB] Get:696 http://deb.debian.org/debian trixie/main amd64 gpg-wks-client amd64 2.2.43-8+b1 [101 kB] Get:697 http://deb.debian.org/debian trixie/main amd64 libhwy1t64 amd64 1.2.0-2 [668 kB] Get:698 http://deb.debian.org/debian trixie/main amd64 libimath-3-1-29t64 amd64 3.1.11-2+b1 [40.8 kB] Get:699 http://deb.debian.org/debian trixie/main amd64 libopenexr-3-1-30 amd64 3.1.5-5.1+b2 [930 kB] Get:700 http://deb.debian.org/debian trixie/main amd64 libjxl0.9 amd64 0.9.2-10 [1013 kB] Get:701 http://deb.debian.org/debian trixie/main amd64 libwmflite-0.2-7 amd64 0.2.13-1.1+b2 [75.4 kB] Get:702 http://deb.debian.org/debian trixie/main amd64 libgraphicsmagick-q16-3t64 amd64 1.4+really1.3.45-1 [1227 kB] Get:703 http://deb.debian.org/debian trixie/main amd64 graphicsmagick amd64 1.4+really1.3.45-1 [1080 kB] Get:704 http://deb.debian.org/debian trixie/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get:705 http://deb.debian.org/debian trixie/main amd64 libcdt5 amd64 2.42.4-2 [40.2 kB] Get:706 http://deb.debian.org/debian trixie/main amd64 libcgraph6 amd64 2.42.4-2 [64.0 kB] Get:707 http://deb.debian.org/debian trixie/main amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2 [157 kB] Get:708 http://deb.debian.org/debian trixie/main amd64 libpathplan4 amd64 2.42.4-2 [42.4 kB] Get:709 http://deb.debian.org/debian trixie/main amd64 libgvc6 amd64 2.42.4-2 [686 kB] Get:710 http://deb.debian.org/debian trixie/main amd64 libgvpr2 amd64 2.42.4-2 [192 kB] Get:711 http://deb.debian.org/debian trixie/main amd64 liblab-gamut1 amd64 2.42.4-2 [198 kB] Get:712 http://deb.debian.org/debian trixie/main amd64 libxmu6 amd64 2:1.1.3-3+b2 [58.7 kB] Get:713 http://deb.debian.org/debian trixie/main amd64 libxaw7 amd64 2:1.0.14-1+b2 [199 kB] Get:714 http://deb.debian.org/debian trixie/main amd64 graphviz amd64 2.42.4-2 [618 kB] Get:715 http://deb.debian.org/debian trixie/main amd64 libpod-parser-perl all 1.67-1 [94.1 kB] Get:716 http://deb.debian.org/debian trixie/main amd64 libgetopt-euclid-perl all 0.4.6-1 [45.0 kB] Get:717 http://deb.debian.org/debian trixie/main amd64 libmath-random-mt-perl amd64 1.17-2+b3 [14.2 kB] Get:718 http://deb.debian.org/debian trixie/main amd64 grinder all 0.5.4-6 [85.3 kB] Get:719 http://deb.debian.org/debian trixie/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get:720 http://deb.debian.org/debian trixie/main amd64 gromacs-data all 2024.2-1 [43.4 MB] Get:721 http://deb.debian.org/debian trixie/main amd64 libfftw3-single3 amd64 3.3.10-1+b3 [806 kB] Get:722 http://deb.debian.org/debian trixie/main amd64 libmuparser2v5 amd64 2.3.4-1 [146 kB] Get:723 http://deb.debian.org/debian trixie/main amd64 libgromacs9 amd64 2024.2-1 [30.8 MB] Get:724 http://deb.debian.org/debian trixie/main amd64 gromacs amd64 2024.2-1 [60.4 kB] Get:725 http://deb.debian.org/debian trixie/main amd64 hhsuite-data all 3.3.0+ds-8 [4402 kB] Get:726 http://deb.debian.org/debian trixie/main amd64 hhsuite amd64 3.3.0+ds-8+b1 [56.4 MB] Get:727 http://deb.debian.org/debian trixie/main amd64 hisat2 amd64 2.2.1-5 [3702 kB] Get:728 http://deb.debian.org/debian trixie/main amd64 libdivsufsort3 amd64 2.0.1-6 [45.6 kB] Get:729 http://deb.debian.org/debian trixie/main amd64 hmmer amd64 3.4+dfsg-2 [1062 kB] Get:730 http://deb.debian.org/debian trixie/main amd64 hunspell-en-gb all 1:24.8.0~rc1-1 [1050 kB] Get:731 http://deb.debian.org/debian trixie/main amd64 hunspell-en-us all 1:2020.12.07-2 [269 kB] Get:732 http://deb.debian.org/debian trixie/main amd64 libva2 amd64 2.22.0-1 [78.3 kB] Get:733 http://deb.debian.org/debian trixie/main amd64 i965-va-driver amd64 2.4.1+dfsg1-1 [309 kB] Get:734 http://deb.debian.org/debian trixie/main amd64 icu-devtools amd64 72.1-5 [207 kB] Get:735 http://deb.debian.org/debian trixie/main amd64 idba amd64 1.1.3-8 [643 kB] Get:736 http://deb.debian.org/debian trixie/main amd64 imagemagick-6.q16 amd64 8:6.9.13.12+dfsg1-1 [290 kB] Get:737 http://deb.debian.org/debian trixie/main amd64 imagemagick amd64 8:6.9.13.12+dfsg1-1 [19.6 kB] Get:738 http://deb.debian.org/debian trixie/main amd64 infernal amd64 1.1.5-2 [5914 kB] Get:739 http://deb.debian.org/debian trixie/main amd64 libigdgmm12 amd64 22.5.0+ds1-1 [175 kB] Get:740 http://deb.debian.org/debian trixie/main amd64 intel-media-va-driver amd64 24.2.5+dfsg1-1 [3010 kB] Get:741 http://deb.debian.org/debian trixie/main amd64 isympy-common all 1.13.2-1 [234 kB] Get:742 http://deb.debian.org/debian trixie/main amd64 isympy3 all 1.13.2-1 [6280 B] Get:743 http://deb.debian.org/debian trixie/main amd64 unzip amd64 6.0-28 [166 kB] Get:744 http://deb.debian.org/debian trixie/main amd64 java-wrappers all 0.5 [8848 B] Get:745 http://deb.debian.org/debian trixie/main amd64 javascript-common all 11+nmu1 [6260 B] Get:746 http://deb.debian.org/debian trixie/main amd64 libjellyfish-2.0-2 amd64 2.3.1-3+b5 [67.2 kB] Get:747 http://deb.debian.org/debian trixie/main amd64 jellyfish amd64 2.3.1-3+b5 [794 kB] Get:748 http://deb.debian.org/debian trixie/main amd64 kalign amd64 1:3.4.0-1+b1 [137 kB] Get:749 http://deb.debian.org/debian trixie/main amd64 kissplice amd64 2.6.7-1 [497 kB] Get:750 http://deb.debian.org/debian trixie/main amd64 lagan amd64 2.0-10 [184 kB] Get:751 http://deb.debian.org/debian trixie/main amd64 laptop-detect all 0.16 [7238 B] Get:752 http://deb.debian.org/debian trixie/main amd64 last-align amd64 1542-1+b1 [1781 kB] Get:753 http://deb.debian.org/debian trixie/main amd64 libc6-i386 amd64 2.40-2 [2490 kB] Get:754 http://deb.debian.org/debian trixie/main amd64 lib32gcc-s1 amd64 14.2.0-3 [88.4 kB] Get:755 http://deb.debian.org/debian trixie/main amd64 lib32stdc++6 amd64 14.2.0-3 [745 kB] Get:756 http://deb.debian.org/debian trixie/main amd64 libaacs0 amd64 0.11.1-4 [57.8 kB] Get:757 http://deb.debian.org/debian trixie/main amd64 liberror-perl all 0.17029-2 [29.0 kB] Get:758 http://deb.debian.org/debian trixie/main amd64 libipc-sharelite-perl amd64 0.17-5+b2 [23.1 kB] Get:759 http://deb.debian.org/debian trixie/main amd64 libcache-cache-perl all 1.08-3 [63.4 kB] Get:760 http://deb.debian.org/debian trixie/main amd64 libace-perl amd64 1.92-12 [274 kB] Get:761 http://deb.debian.org/debian trixie/main amd64 libalgorithm-diff-xs-perl amd64 0.04-8+b3 [11.5 kB] Get:762 http://deb.debian.org/debian trixie/main amd64 libalgorithm-merge-perl all 0.08-5 [11.8 kB] Get:763 http://deb.debian.org/debian trixie/main amd64 libalgorithm-munkres-perl all 0.08-5 [11.3 kB] Get:764 http://deb.debian.org/debian trixie/main amd64 libsuitesparseconfig7 amd64 1:7.8.2+dfsg-2 [23.3 kB] Get:765 http://deb.debian.org/debian trixie/main amd64 libamd3 amd64 1:7.8.2+dfsg-2 [40.2 kB] Get:766 http://deb.debian.org/debian trixie/main amd64 libdevel-symdump-perl all 2.18-5 [15.8 kB] Get:767 http://deb.debian.org/debian trixie/main amd64 libapache2-mod-perl2 amd64 2.0.13-1+b3 [809 kB] Get:768 http://deb.debian.org/debian trixie/main amd64 libdbi-perl amd64 1.645-1 [860 kB] Get:769 http://deb.debian.org/debian trixie/main amd64 libapache-dbi-perl all 1.12-3 [48.5 kB] Get:770 http://deb.debian.org/debian trixie/main amd64 libapache2-reload-perl all 0.14-1 [16.2 kB] Get:771 http://deb.debian.org/debian trixie/main amd64 libarpack2t64 amd64 3.9.1-1.1+b2 [104 kB] Get:772 http://deb.debian.org/debian trixie/main amd64 libsuperlu6 amd64 6.0.1+dfsg1-1+b1 [170 kB] Get:773 http://deb.debian.org/debian trixie/main amd64 libarmadillo14 amd64 1:14.0.1+dfsg-2 [102 kB] Get:774 http://deb.debian.org/debian trixie/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:775 http://deb.debian.org/debian trixie/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b3 [36.2 kB] Get:776 http://deb.debian.org/debian trixie/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:777 http://deb.debian.org/debian trixie/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:778 http://deb.debian.org/debian trixie/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:779 http://deb.debian.org/debian trixie/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:780 http://deb.debian.org/debian trixie/main amd64 libexporter-tiny-perl all 1.006002-1 [38.7 kB] Get:781 http://deb.debian.org/debian trixie/main amd64 libtype-tiny-perl all 2.004000-1 [357 kB] Get:782 http://deb.debian.org/debian trixie/main amd64 libarray-compare-perl all 3.0.8-1 [14.9 kB] Get:783 http://deb.debian.org/debian trixie/main amd64 libunibreak6 amd64 6.1-2 [21.5 kB] Get:784 http://deb.debian.org/debian trixie/main amd64 libass9 amd64 1:0.17.3-1 [112 kB] Get:785 http://deb.debian.org/debian trixie/main amd64 libasyncns0 amd64 0.8-6+b4 [12.1 kB] Get:786 http://deb.debian.org/debian trixie/main amd64 libxcb-shape0 amd64 1.17.0-2 [105 kB] Get:787 http://deb.debian.org/debian trixie/main amd64 libxkbfile1 amd64 1:1.1.0-1+b1 [76.6 kB] Get:788 http://deb.debian.org/debian trixie/main amd64 libxmuu1 amd64 2:1.1.3-3+b2 [21.9 kB] Get:789 http://deb.debian.org/debian trixie/main amd64 libxv1 amd64 2:1.0.11-1.1+b1 [23.4 kB] Get:790 http://deb.debian.org/debian trixie/main amd64 libxxf86dga1 amd64 2:1.1.5-1+b1 [20.7 kB] Get:791 http://deb.debian.org/debian trixie/main amd64 x11-utils amd64 7.7+7 [182 kB] Get:792 http://deb.debian.org/debian trixie/main amd64 libatk-wrapper-java all 0.40.0-3 [63.4 kB] Get:793 http://deb.debian.org/debian trixie/main amd64 libatk-wrapper-java-jni amd64 0.40.0-3+b2 [53.2 kB] Get:794 http://deb.debian.org/debian trixie/main amd64 libauthen-sasl-perl all 2.1700-1 [44.8 kB] Get:795 http://deb.debian.org/debian trixie/main amd64 libva-drm2 amd64 2.22.0-1 [18.3 kB] Get:796 http://deb.debian.org/debian trixie/main amd64 libva-x11-2 amd64 2.22.0-1 [23.1 kB] Get:797 http://deb.debian.org/debian trixie/main amd64 libvdpau1 amd64 1.5-3 [26.6 kB] Get:798 http://deb.debian.org/debian trixie/main amd64 libvpl2 amd64 1:2.13.0-1 [128 kB] Get:799 http://deb.debian.org/debian trixie/main amd64 libavutil59 amd64 7:7.0.2-3 [404 kB] Get:800 http://deb.debian.org/debian trixie/main amd64 libcodec2-1.2 amd64 1.2.0-2+b1 [8176 kB] Get:801 http://deb.debian.org/debian trixie/main amd64 libgsm1 amd64 1.0.22-1+b1 [28.7 kB] Get:802 http://deb.debian.org/debian trixie/main amd64 libmp3lame0 amd64 3.100-6+b2 [361 kB] Get:803 http://deb.debian.org/debian trixie/main amd64 libopus0 amd64 1.5.2-2 [2852 kB] Get:804 http://deb.debian.org/debian trixie/main amd64 librsvg2-2 amd64 2.59.0+dfsg-3 [1846 kB] Get:805 http://deb.debian.org/debian trixie/main amd64 libshine3 amd64 3.1.1-2+b1 [22.8 kB] Get:806 http://deb.debian.org/debian trixie/main amd64 libspeex1 amd64 1.2.1-2+b1 [56.4 kB] Get:807 http://deb.debian.org/debian trixie/main amd64 libsoxr0 amd64 0.1.3-4+b1 [79.6 kB] Get:808 http://deb.debian.org/debian trixie/main amd64 libswresample5 amd64 7:7.0.2-3 [98.4 kB] Get:809 http://deb.debian.org/debian trixie/main amd64 libogg0 amd64 1.3.5-3+b1 [23.7 kB] Get:810 http://deb.debian.org/debian trixie/main amd64 libtheora0 amd64 1.1.1+dfsg.1-17 [155 kB] Get:811 http://deb.debian.org/debian trixie/main amd64 libtwolame0 amd64 0.4.0-2+b1 [51.0 kB] Get:812 http://deb.debian.org/debian trixie/main amd64 libvorbis0a amd64 1.3.7-2 [89.7 kB] Get:813 http://deb.debian.org/debian trixie/main amd64 libvorbisenc2 amd64 1.3.7-2 [75.9 kB] Get:814 http://deb.debian.org/debian trixie/main amd64 libvpx9 amd64 1.14.1-1 [1079 kB] Get:815 http://deb.debian.org/debian trixie/main amd64 libx264-164 amd64 2:0.164.3108+git31e19f9-2 [558 kB] Get:816 http://deb.debian.org/debian trixie/main amd64 libx265-209 amd64 3.6-3 [1181 kB] Get:817 http://deb.debian.org/debian trixie/main amd64 libxvidcore4 amd64 2:1.3.7-1+b1 [250 kB] Get:818 http://deb.debian.org/debian trixie/main amd64 libzvbi-common all 0.2.42-2 [70.4 kB] Get:819 http://deb.debian.org/debian trixie/main amd64 libzvbi0t64 amd64 0.2.42-2 [275 kB] Get:820 http://deb.debian.org/debian trixie/main amd64 libavcodec61 amd64 7:7.0.2-3 [5738 kB] Get:821 http://deb.debian.org/debian trixie/main amd64 libudfread0 amd64 1.1.2-1+b1 [17.6 kB] Get:822 http://deb.debian.org/debian trixie/main amd64 libbluray2 amd64 1:1.3.4-1+b1 [138 kB] Get:823 http://deb.debian.org/debian trixie/main amd64 libchromaprint1 amd64 1.5.1-6 [42.8 kB] Get:824 http://deb.debian.org/debian trixie/main amd64 libdvdread8t64 amd64 6.1.3-1.1 [85.6 kB] Get:825 http://deb.debian.org/debian trixie/main amd64 libdvdnav4 amd64 6.1.1-3 [44.0 kB] Get:826 http://deb.debian.org/debian trixie/main amd64 libgme0 amd64 0.6.3-7+b1 [130 kB] Get:827 http://deb.debian.org/debian trixie/main amd64 libmpg123-0t64 amd64 1.32.7-1 [149 kB] Get:828 http://deb.debian.org/debian trixie/main amd64 libvorbisfile3 amd64 1.3.7-2 [21.1 kB] Get:829 http://deb.debian.org/debian trixie/main amd64 libopenmpt0t64 amd64 0.7.9-1 [849 kB] Get:830 http://deb.debian.org/debian trixie/main amd64 librabbitmq4 amd64 0.14.0-1 [41.4 kB] Get:831 http://deb.debian.org/debian trixie/main amd64 libcjson1 amd64 1.7.18-3 [29.5 kB] Get:832 http://deb.debian.org/debian trixie/main amd64 librist4 amd64 0.2.10+dfsg-2 [71.6 kB] Get:833 http://deb.debian.org/debian trixie/main amd64 libsrt1.5-gnutls amd64 1.5.3-1+b2 [327 kB] Get:834 http://deb.debian.org/debian trixie/main amd64 libssh-4 amd64 0.11.1-1 [208 kB] Get:835 http://deb.debian.org/debian trixie/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1 [221 kB] Get:836 http://deb.debian.org/debian trixie/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1 [161 kB] Get:837 http://deb.debian.org/debian trixie/main amd64 libsodium23 amd64 1.0.18-1+b1 [163 kB] Get:838 http://deb.debian.org/debian trixie/main amd64 libzmq5 amd64 4.3.5-1+b2 [281 kB] Get:839 http://deb.debian.org/debian trixie/main amd64 libavformat61 amd64 7:7.0.2-3 [1179 kB] Get:840 http://deb.debian.org/debian trixie/main amd64 libbs2b0 amd64 3.1.0+dfsg-8 [11.5 kB] Get:841 http://deb.debian.org/debian trixie/main amd64 libflite1 amd64 2.2-6+b2 [12.8 MB] Get:842 http://deb.debian.org/debian trixie/main amd64 libserd-0-0 amd64 0.32.2-1 [46.7 kB] Get:843 http://deb.debian.org/debian trixie/main amd64 libzix-0-0 amd64 0.4.2-2+b1 [22.3 kB] Get:844 http://deb.debian.org/debian trixie/main amd64 libsord-0-0 amd64 0.16.16-2+b1 [18.2 kB] Get:845 http://deb.debian.org/debian trixie/main amd64 libsratom-0-0 amd64 0.6.16-1+b1 [17.7 kB] Get:846 http://deb.debian.org/debian trixie/main amd64 liblilv-0-0 amd64 0.24.24-2 [43.7 kB] Get:847 http://deb.debian.org/debian trixie/main amd64 libmysofa1 amd64 1.3.2+dfsg-2+b1 [1158 kB] Get:848 http://deb.debian.org/debian trixie/main amd64 libplacebo349 amd64 7.349.0-2 [2476 kB] Get:849 http://deb.debian.org/debian trixie/main amd64 libflac12t64 amd64 1.4.3+ds-2.1 [200 kB] Get:850 http://deb.debian.org/debian trixie/main amd64 libsndfile1 amd64 1.2.2-1+b2 [197 kB] Get:851 http://deb.debian.org/debian trixie/main amd64 libpulse0 amd64 16.1+dfsg1-5.1 [274 kB] Get:852 http://deb.debian.org/debian trixie/main amd64 libsphinxbase3t64 amd64 0.8+5prealpha+1-18 [121 kB] Get:853 http://deb.debian.org/debian trixie/main amd64 libpocketsphinx3 amd64 0.8+5prealpha+1-15+b3 [125 kB] Get:854 http://deb.debian.org/debian trixie/main amd64 libpostproc58 amd64 7:7.0.2-3 [85.2 kB] Get:855 http://deb.debian.org/debian trixie/main amd64 libsamplerate0 amd64 0.2.2-4+b1 [951 kB] Get:856 http://deb.debian.org/debian trixie/main amd64 librubberband2 amd64 3.3.0+dfsg-2+b2 [137 kB] Get:857 http://deb.debian.org/debian trixie/main amd64 libswscale8 amd64 7:7.0.2-3 [218 kB] Get:858 http://deb.debian.org/debian trixie/main amd64 libvidstab1.1 amd64 1.1.0-2+b1 [37.8 kB] Get:859 http://deb.debian.org/debian trixie/main amd64 libzimg2 amd64 3.0.5+ds1-1+b1 [241 kB] Get:860 http://deb.debian.org/debian trixie/main amd64 libavfilter10 amd64 7:7.0.2-3 [3994 kB] Get:861 http://deb.debian.org/debian trixie/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:862 http://deb.debian.org/debian trixie/main amd64 libvariable-magic-perl amd64 0.64-1 [44.7 kB] Get:863 http://deb.debian.org/debian trixie/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:864 http://deb.debian.org/debian trixie/main amd64 libbambamc0 amd64 0.0.50-6+b1 [39.1 kB] Get:865 http://deb.debian.org/debian trixie/main amd64 libcommons-lang3-java all 3.14.0-1 [621 kB] Get:866 http://deb.debian.org/debian trixie/main amd64 libfreemarker-java all 2.3.32-2 [1546 kB] Get:867 http://deb.debian.org/debian trixie/main amd64 libgoogle-gson-java all 2.10.1-1 [262 kB] Get:868 http://deb.debian.org/debian trixie/main amd64 libjoptsimple-java all 5.0.4-4 [73.1 kB] Get:869 http://deb.debian.org/debian trixie/main amd64 libcommons-codec-java all 1.16.0-1 [297 kB] Get:870 http://deb.debian.org/debian trixie/main amd64 libhttpcore-java all 4.4.16-1 [636 kB] Get:871 http://deb.debian.org/debian trixie/main amd64 libhttpclient-java all 4.5.14-1 [1247 kB] Get:872 http://deb.debian.org/debian trixie/main amd64 liblightcouch-java all 0.2.0-1 [75.0 kB] Get:873 http://deb.debian.org/debian trixie/main amd64 libmongodb-java all 3.6.3-2 [1901 kB] Get:874 http://deb.debian.org/debian trixie/main amd64 libslf4j-java all 1.7.32-1 [144 kB] Get:875 http://deb.debian.org/debian trixie/main amd64 liblog4j2-java all 2.19.0-2 [2310 kB] Get:876 http://deb.debian.org/debian trixie/main amd64 libbarclay-java all 5.0.0+dfsg-1 [108 kB] Get:877 http://deb.debian.org/debian trixie/main amd64 libbdplus0 amd64 0.2.0-4 [54.7 kB] Get:878 http://deb.debian.org/debian trixie/main amd64 liblatex-tounicode-perl all 0.55-1 [28.8 kB] Get:879 http://deb.debian.org/debian trixie/main amd64 libbibtex-parser-perl all 1.05+dfsg-1 [17.4 kB] Get:880 http://deb.debian.org/debian trixie/main amd64 libcarp-clan-perl all 6.08-2 [14.1 kB] Get:881 http://deb.debian.org/debian trixie/main amd64 libbit-vector-perl amd64 7.4-3+b1 [141 kB] Get:882 http://deb.debian.org/debian trixie/main amd64 libblas-dev amd64 3.12.0-3 [159 kB] Get:883 http://deb.debian.org/debian trixie/main amd64 libblosc1 amd64 1.21.5+ds-1+b1 [49.6 kB] Get:884 http://deb.debian.org/debian trixie/main amd64 libboost1.83-dev amd64 1.83.0-3.2 [10.6 MB] Get:885 http://deb.debian.org/debian trixie/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get:886 http://deb.debian.org/debian trixie/main amd64 libboost-mpi1.83.0 amd64 1.83.0-3.2 [271 kB] Get:887 http://deb.debian.org/debian trixie/main amd64 libbsd-resource-perl amd64 1.2911-2+b3 [31.9 kB] Get:888 http://deb.debian.org/debian trixie/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB] Get:889 http://deb.debian.org/debian trixie/main amd64 libcares2 amd64 1.33.1-1 [80.2 kB] Get:890 http://deb.debian.org/debian trixie/main amd64 libcfitsio10t64 amd64 4.4.1-2 [566 kB] Get:891 http://deb.debian.org/debian trixie/main amd64 libcgi-pm-perl all 4.66-1 [217 kB] Get:892 http://deb.debian.org/debian trixie/main amd64 libcgi-fast-perl all 1:2.17-1 [11.8 kB] Get:893 http://deb.debian.org/debian trixie/main amd64 libclang-common-18-dev amd64 1:18.1.8-11 [731 kB] Get:894 http://deb.debian.org/debian trixie/main amd64 libclang-cpp18 amd64 1:18.1.8-11 [12.5 MB] Get:895 http://deb.debian.org/debian trixie/main amd64 libclang-rt-18-dev amd64 1:18.1.8-11 [3528 kB] Get:896 http://deb.debian.org/debian trixie/main amd64 libclc-18-dev all 1:18.1.8-11 [64.9 kB] Get:897 http://deb.debian.org/debian trixie/main amd64 libclc-18 all 1:18.1.8-11 [10.4 MB] Get:898 http://deb.debian.org/debian trixie/main amd64 libcolamd3 amd64 1:7.8.2+dfsg-2 [32.0 kB] Get:899 http://deb.debian.org/debian trixie/main amd64 libcommons-io-java all 2.16.1-1 [480 kB] Get:900 http://deb.debian.org/debian trixie/main amd64 libconvert-binary-c-perl amd64 0.84-1+b4 [272 kB] Get:901 http://deb.debian.org/debian trixie/main amd64 libcrypt-rc4-perl all 2.02-5 [7480 B] Get:902 http://deb.debian.org/debian trixie/main amd64 libjson-c5 amd64 0.18+ds-1 [46.0 kB] Get:903 http://deb.debian.org/debian trixie/main amd64 libcryptsetup12 amd64 2:2.7.5-1 [253 kB] Get:904 http://deb.debian.org/debian trixie/main amd64 libdata-dump-perl all 1.25-1 [28.4 kB] Get:905 http://deb.debian.org/debian trixie/main amd64 libdate-calc-perl all 6.4-2 [191 kB] Get:906 http://deb.debian.org/debian trixie/main amd64 libdate-calc-xs-perl amd64 6.4-2+b3 [52.1 kB] Get:907 http://deb.debian.org/debian trixie/main amd64 libdate-manip-perl all 6.95-1 [908 kB] Get:908 http://deb.debian.org/debian trixie/main amd64 libdbd-mysql-perl amd64 4.052-1+b2 [114 kB] Get:909 http://deb.debian.org/debian trixie/main amd64 libdbd-pg-perl amd64 3.18.0-1+b2 [211 kB] Get:910 http://deb.debian.org/debian trixie/main amd64 libdbd-sqlite3-perl amd64 1.74-1+b2 [175 kB] Get:911 http://deb.debian.org/debian trixie/main amd64 libdeflate-dev amd64 1.21-1 [55.8 kB] Get:912 http://deb.debian.org/debian trixie/main amd64 libdigest-perl-md5-perl all 1.9-5 [11.7 kB] Get:913 http://deb.debian.org/debian trixie/main amd64 libdjvulibre-text all 3.5.28-2 [61.8 kB] Get:914 http://deb.debian.org/debian trixie/main amd64 libdjvulibre21 amd64 3.5.28-2+b1 [585 kB] Get:915 http://deb.debian.org/debian trixie/main amd64 libegl-mesa0 amd64 24.2.2-1 [133 kB] Get:916 http://deb.debian.org/debian trixie/main amd64 libfcgi-bin amd64 2.4.2-2.1 [11.6 kB] Get:917 http://deb.debian.org/debian trixie/main amd64 libfile-desktopentry-perl all 0.22-3 [17.6 kB] Get:918 http://deb.debian.org/debian trixie/main amd64 libfile-fcntllock-perl amd64 0.22-4+b3 [30.3 kB] Get:919 http://deb.debian.org/debian trixie/main amd64 libfile-mimeinfo-perl all 0.35-1 [44.4 kB] Get:920 http://deb.debian.org/debian trixie/main amd64 libfont-afm-perl all 1.20-4 [13.1 kB] Get:921 http://deb.debian.org/debian trixie/main amd64 libminizip1t64 amd64 1:1.3.dfsg+really1.3.1-1 [52.5 kB] Get:922 http://deb.debian.org/debian trixie/main amd64 libfreexl1 amd64 2.0.0-1+b2 [39.9 kB] Get:923 http://deb.debian.org/debian trixie/main amd64 libfreezethaw-perl all 0.5001-3 [16.0 kB] Get:924 http://deb.debian.org/debian trixie/main amd64 libfyba0t64 amd64 4.1.1-11 [112 kB] Get:925 http://deb.debian.org/debian trixie/main amd64 libg20 amd64 0.72-12+b2 [41.5 kB] Get:926 http://deb.debian.org/debian trixie/main amd64 libgatk-native-bindings-java all 1.0.0+dfsg-2 [8024 B] Get:927 http://deb.debian.org/debian trixie/main amd64 libgeos3.13.0 amd64 3.13.0-1 [968 kB] Get:928 http://deb.debian.org/debian trixie/main amd64 libgeos-c1t64 amd64 3.13.0-1 [102 kB] Get:929 http://deb.debian.org/debian trixie/main amd64 proj-data all 9.5.0-1 [6293 kB] Get:930 http://deb.debian.org/debian trixie/main amd64 libproj25 amd64 9.5.0-1 [1420 kB] Get:931 http://deb.debian.org/debian trixie/main amd64 libgeotiff5 amd64 1.7.3-1 [68.6 kB] Get:932 http://deb.debian.org/debian trixie/main amd64 libhdf4-0-alt amd64 4.3.0-1 [267 kB] Get:933 http://deb.debian.org/debian trixie/main amd64 liburiparser1 amd64 0.9.8+dfsg-1 [44.3 kB] Get:934 http://deb.debian.org/debian trixie/main amd64 libkmlbase1t64 amd64 1.3.0-12 [49.3 kB] Get:935 http://deb.debian.org/debian trixie/main amd64 libkmldom1t64 amd64 1.3.0-12 [158 kB] Get:936 http://deb.debian.org/debian trixie/main amd64 libkmlengine1t64 amd64 1.3.0-12 [78.7 kB] Get:937 http://deb.debian.org/debian trixie/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get:938 http://deb.debian.org/debian trixie/main amd64 libnetcdf19t64 amd64 1:4.9.2-7 [477 kB] Get:939 http://deb.debian.org/debian trixie/main amd64 libodbc2 amd64 2.3.12-1+b2 [150 kB] Get:940 http://deb.debian.org/debian trixie/main amd64 unixodbc-common all 2.3.12-1 [8496 B] Get:941 http://deb.debian.org/debian trixie/main amd64 libodbcinst2 amd64 2.3.12-1+b2 [34.9 kB] Get:942 http://deb.debian.org/debian trixie/main amd64 libogdi4.1 amd64 4.1.1+ds-4 [231 kB] Get:943 http://deb.debian.org/debian trixie/main amd64 libpoppler140 amd64 24.08.0-2 [1954 kB] Get:944 http://deb.debian.org/debian trixie/main amd64 librttopo1 amd64 1.1.0-3+b1 [179 kB] Get:945 http://deb.debian.org/debian trixie/main amd64 libspatialite8t64 amd64 5.1.0-3+b1 [1842 kB] Get:946 http://deb.debian.org/debian trixie/main amd64 libgdal35 amd64 3.9.2+dfsg-1+b1 [9204 kB] Get:947 http://deb.debian.org/debian trixie/main amd64 libgdk-pixbuf2.0-bin amd64 2.42.12+dfsg-1 [18.4 kB] Get:948 http://deb.debian.org/debian trixie/main amd64 libhttp-parser2.9 amd64 2.9.4-6+b1 [21.0 kB] Get:949 http://deb.debian.org/debian trixie/main amd64 libgit2-1.7 amd64 1.7.2+ds-1+b2 [518 kB] Get:950 http://deb.debian.org/debian trixie/main amd64 libgkl-java all 0.8.11+dfsg-2 [24.7 kB] Get:951 http://deb.debian.org/debian trixie/main amd64 libgkl-jni amd64 0.8.11+dfsg-2 [237 kB] Get:952 http://deb.debian.org/debian trixie/main amd64 libgles2 amd64 1.7.0-1+b1 [17.3 kB] Get:953 http://deb.debian.org/debian trixie/main amd64 libglib2.0-data all 2.82.1-1 [1277 kB] Get:954 http://deb.debian.org/debian trixie/main amd64 libglpk40 amd64 5.0-1+b1 [397 kB] Get:955 http://deb.debian.org/debian trixie/main amd64 libopengl0 amd64 1.7.0-1+b1 [31.1 kB] Get:956 http://deb.debian.org/debian trixie/main amd64 libglu1-mesa amd64 9.0.2-1.1+b1 [180 kB] Get:957 http://deb.debian.org/debian trixie/main amd64 libgpm2 amd64 1.20.7-11 [14.0 kB] Get:958 http://deb.debian.org/debian trixie/main amd64 libheap-perl all 0.80-5 [34.3 kB] Get:959 http://deb.debian.org/debian trixie/main amd64 libset-object-perl amd64 1.42-1+b4 [37.5 kB] Get:960 http://deb.debian.org/debian trixie/main amd64 libgraph-perl all 1:0.9729-1 [108 kB] Get:961 http://deb.debian.org/debian trixie/main amd64 libparse-recdescent-perl all 1.967015+dfsg-4 [147 kB] Get:962 http://deb.debian.org/debian trixie/main amd64 libxml-xpath-perl all 1.48-1 [71.0 kB] Get:963 http://deb.debian.org/debian trixie/main amd64 libgraphviz-perl all 2.24-1 [92.7 kB] Get:964 http://deb.debian.org/debian trixie/main amd64 libgtk-3-bin amd64 3.24.43-4 [85.5 kB] Get:965 http://deb.debian.org/debian trixie/main amd64 libgts-bin amd64 0.7.6+darcs121130-5.2 [47.2 kB] Get:966 http://deb.debian.org/debian trixie/main amd64 libgumbo2 amd64 0.12.0+dfsg-2+b1 [111 kB] Get:967 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-aomenc amd64 1.18.1-2 [20.2 kB] Get:968 http://deb.debian.org/debian trixie/main amd64 libheif-plugin-x265 amd64 1.18.1-2 [19.2 kB] Get:969 http://deb.debian.org/debian trixie/main amd64 libllvmspirvlib18.1 amd64 18.1.4-1 [858 kB] Get:970 http://deb.debian.org/debian trixie/main amd64 mesa-opencl-icd amd64 24.2.2-1 [22.5 MB] Get:971 http://deb.debian.org/debian trixie/main amd64 libhmsbeagle1v5 amd64 3.1.2+dfsg-13+b1 [139 kB] Get:972 http://deb.debian.org/debian trixie/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:973 http://deb.debian.org/debian trixie/main amd64 libhtml-format-perl all 2.16-2 [38.8 kB] Get:974 http://deb.debian.org/debian trixie/main amd64 libhtml-tableextract-perl all 2.15-2 [30.6 kB] Get:975 http://deb.debian.org/debian trixie/main amd64 libhunspell-1.7-0 amd64 1.7.2+really1.7.2-10+b2 [233 kB] Get:976 http://deb.debian.org/debian trixie/main amd64 libicu-dev amd64 72.1-5 [10.4 MB] Get:977 http://deb.debian.org/debian trixie/main amd64 libio-compress-brotli-perl amd64 0.004001-2+b2 [16.9 kB] Get:978 http://deb.debian.org/debian trixie/main amd64 libjcode-pm-perl amd64 2.06-1.1 [30.0 kB] Get:979 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3 [290 kB] Get:980 http://deb.debian.org/debian trixie/main amd64 libjpeg-dev amd64 1:2.1.5-3 [71.9 kB] Get:981 http://deb.debian.org/debian trixie/main amd64 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get:982 http://deb.debian.org/debian trixie/main amd64 libjs-popper.js all 1.16.1+ds-6 [52.4 kB] Get:983 http://deb.debian.org/debian trixie/main amd64 libjs-bootstrap4 all 4.6.1+dfsg1-4 [517 kB] Get:984 http://deb.debian.org/debian trixie/main amd64 libjs-bootswatch all 3.3.7+dfsg2-1.1 [133 kB] Get:985 http://deb.debian.org/debian trixie/main amd64 libjs-d3 all 3.5.17-4 [132 kB] Get:986 http://deb.debian.org/debian trixie/main amd64 libjs-es5-shim all 4.6.7-2 [47.4 kB] Get:987 http://deb.debian.org/debian trixie/main amd64 libjs-highlight.js all 9.18.5+dfsg1-2 [397 kB] Get:988 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-datatables all 1.11.5+dfsg-2 [144 kB] Get:989 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-datatables-extensions all 0.0+git20150910.28fd64e+dfsg-5 [648 kB] Get:990 http://deb.debian.org/debian trixie/main amd64 libjs-sifter.js all 0.6.0+dfsg-3 [12.2 kB] Get:991 http://deb.debian.org/debian trixie/main amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3672 B] Get:992 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [52.1 kB] Get:993 http://deb.debian.org/debian trixie/main amd64 libjs-json all 0~20221030+~1.0.8-1 [20.0 kB] Get:994 http://deb.debian.org/debian trixie/main amd64 libjs-lunr all 2.3.9~dfsg-2 [76.6 kB] Get:995 http://deb.debian.org/debian trixie/main amd64 libjs-modernizr all 3.13.0-0.1 [191 kB] Get:996 http://deb.debian.org/debian trixie/main amd64 libjs-prettify all 2015.12.04+dfsg-1.1 [41.7 kB] Get:997 http://deb.debian.org/debian trixie/main amd64 libjs-remark-slide all 0.15.0+ds-2 [855 kB] Get:998 http://deb.debian.org/debian trixie/main amd64 libjs-sizzle all 2.3.10+ds+~2.3.6-1 [32.2 kB] Get:999 http://deb.debian.org/debian trixie/main amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [32.1 kB] Get:1000 http://deb.debian.org/debian trixie/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get:1001 http://deb.debian.org/debian trixie/main amd64 libjxr0t64 amd64 1.2~git20170615.f752187-5.3 [171 kB] Get:1002 http://deb.debian.org/debian trixie/main amd64 libjxr-tools amd64 1.2~git20170615.f752187-5.3 [16.9 kB] Get:1003 http://deb.debian.org/debian trixie/main amd64 libkmod2 amd64 33+20240816-2 [63.1 kB] Get:1004 http://deb.debian.org/debian trixie/main amd64 liblapack-dev amd64 3.12.0-3 [4880 kB] Get:1005 http://deb.debian.org/debian trixie/main amd64 libldap-common all 2.5.18+dfsg-3 [32.0 kB] Get:1006 http://deb.debian.org/debian trixie/main amd64 liblist-moreutils-xs-perl amd64 0.430-4+b1 [42.3 kB] Get:1007 http://deb.debian.org/debian trixie/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:1008 http://deb.debian.org/debian trixie/main amd64 liblist-someutils-xs-perl amd64 0.58-3+b2 [34.1 kB] Get:1009 http://deb.debian.org/debian trixie/main amd64 liblmdb0 amd64 0.9.31-1+b1 [44.8 kB] Get:1010 http://deb.debian.org/debian trixie/main amd64 liblzma-dev amd64 5.6.2-2 [299 kB] Get:1011 http://deb.debian.org/debian trixie/main amd64 libmagick++-6.q16-9t64 amd64 8:6.9.13.12+dfsg1-1 [144 kB] Get:1012 http://deb.debian.org/debian trixie/main amd64 libmagickcore-6.q16-7-extra amd64 8:6.9.13.12+dfsg1-1 [71.3 kB] Get:1013 http://deb.debian.org/debian trixie/main amd64 libmath-derivative-perl all 1.01-3 [8060 B] Get:1014 http://deb.debian.org/debian trixie/main amd64 libmath-spline-perl all 0.02-4 [6808 B] Get:1015 http://deb.debian.org/debian trixie/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:1016 http://deb.debian.org/debian trixie/main amd64 libmpfi0 amd64 1.5.4+ds-3 [35.1 kB] Get:1017 http://deb.debian.org/debian trixie/main amd64 libmujs3 amd64 1.3.3-3+b2 [123 kB] Get:1018 http://deb.debian.org/debian trixie/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:1019 http://deb.debian.org/debian trixie/main amd64 libsub-identify-perl amd64 0.14-3+b2 [11.2 kB] Get:1020 http://deb.debian.org/debian trixie/main amd64 libsub-name-perl amd64 0.27-1+b2 [12.5 kB] Get:1021 http://deb.debian.org/debian trixie/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:1022 http://deb.debian.org/debian trixie/main amd64 libncbi-wvdb3 amd64 3.0.2+dfsg-2+b1 [1078 kB] Get:1023 http://deb.debian.org/debian trixie/main amd64 ncbi-data all 6.1.20170106+dfsg2-4 [3540 kB] Get:1024 http://deb.debian.org/debian trixie/main amd64 libncbi6t64 amd64 6.1.20170106+dfsg2-4 [4103 kB] Get:1025 http://deb.debian.org/debian trixie/main amd64 libncurses6 amd64 6.5-2 [104 kB] Get:1026 http://deb.debian.org/debian trixie/main amd64 libncurses-dev amd64 6.5-2 [349 kB] Get:1027 http://deb.debian.org/debian trixie/main amd64 libnet-dbus-perl amd64 1.2.0-2+b2 [168 kB] Get:1028 http://deb.debian.org/debian trixie/main amd64 libnetpbm11t64 amd64 2:11.07.00-2 [182 kB] Get:1029 http://deb.debian.org/debian trixie/main amd64 libnlopt0 amd64 2.7.1-5+b4 [174 kB] Get:1030 http://deb.debian.org/debian trixie/main amd64 libuv1t64 amd64 1.48.0-6 [148 kB] Get:1031 http://deb.debian.org/debian trixie/main amd64 node-xtend all 4.0.2-3 [3932 B] Get:1032 http://deb.debian.org/debian trixie/main amd64 nodejs amd64 20.17.0+dfsg-2 [347 kB] Get:1033 http://deb.debian.org/debian trixie/main amd64 node-acorn all 8.8.1+ds+~cs25.17.7-2 [128 kB] Get:1034 http://deb.debian.org/debian trixie/main amd64 node-cjs-module-lexer all 1.2.3+dfsg-1 [30.6 kB] Get:1035 http://deb.debian.org/debian trixie/main amd64 node-balanced-match all 2.0.0-1 [4872 B] Get:1036 http://deb.debian.org/debian trixie/main amd64 node-brace-expansion all 2.0.1+~1.1.0-1 [7912 B] Get:1037 http://deb.debian.org/debian trixie/main amd64 node-minimatch all 9.0.3-5 [76.7 kB] Get:1038 http://deb.debian.org/debian trixie/main amd64 node-undici all 5.28.4+dfsg1+~cs23.12.11-2 [314 kB] Get:1039 http://deb.debian.org/debian trixie/main amd64 libnode115 amd64 20.17.0+dfsg-2 [12.1 MB] Get:1040 http://deb.debian.org/debian trixie/main amd64 libole-storage-lite-perl all 0.22-1 [22.8 kB] Get:1041 http://deb.debian.org/debian trixie/main amd64 libopenblas0 amd64 0.3.28+ds-2 [40.9 kB] Get:1042 http://deb.debian.org/debian trixie/main amd64 libpackage-stash-xs-perl amd64 0.30-1+b3 [20.2 kB] Get:1043 http://deb.debian.org/debian trixie/main amd64 libpaper-utils amd64 1.1.29+b1 [9176 B] Get:1044 http://deb.debian.org/debian trixie/main amd64 libpcre2-16-0 amd64 10.42-4+b1 [246 kB] Get:1045 http://deb.debian.org/debian trixie/main amd64 libpcre2-32-0 amd64 10.42-4+b1 [234 kB] Get:1046 http://deb.debian.org/debian trixie/main amd64 libpcre2-posix3 amd64 10.42-4+b1 [55.8 kB] Get:1047 http://deb.debian.org/debian trixie/main amd64 libpcre2-dev amd64 10.42-4+b1 [755 kB] Get:1048 http://deb.debian.org/debian trixie/main amd64 libperl4-corelibs-perl all 0.005-1 [39.0 kB] Get:1049 http://deb.debian.org/debian trixie/main amd64 libpicard-java all 3.1.1+dfsg-1 [1743 kB] Get:1050 http://deb.debian.org/debian trixie/main amd64 libpkgconf3 amd64 1.8.1-3 [36.2 kB] Get:1051 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] Get:1052 http://deb.debian.org/debian trixie/main amd64 libpng-dev amd64 1.6.44-1 [362 kB] Get:1053 http://deb.debian.org/debian trixie/main amd64 libpng-tools amd64 1.6.44-1 [129 kB] Get:1054 http://deb.debian.org/debian trixie/main amd64 libpod-coverage-perl all 0.23-2 [22.1 kB] Get:1055 http://deb.debian.org/debian trixie/main amd64 libpoppler-cpp1 amd64 24.08.0-2 [43.2 kB] Get:1056 http://deb.debian.org/debian trixie/main amd64 libpostscript-perl all 0.06-3.1 [26.0 kB] Get:1057 http://deb.debian.org/debian trixie/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-4 [49.1 kB] Get:1058 http://deb.debian.org/debian trixie/main amd64 libqpdf29t64 amd64 11.9.1-1 [934 kB] Get:1059 http://deb.debian.org/debian trixie/main amd64 libre2-11 amd64 20240501-3 [194 kB] Get:1060 http://deb.debian.org/debian trixie/main amd64 libreadline-dev amd64 8.2-5 [153 kB] Get:1061 http://deb.debian.org/debian trixie/main amd64 libref-util-perl all 0.204-2 [17.4 kB] Get:1062 http://deb.debian.org/debian trixie/main amd64 libref-util-xs-perl amd64 0.117-2+b3 [14.0 kB] Get:1063 http://deb.debian.org/debian trixie/main amd64 librsvg2-common amd64 2.59.0+dfsg-3 [147 kB] Get:1064 http://deb.debian.org/debian trixie/main amd64 rubygems-integration all 1.18 [6704 B] Get:1065 http://deb.debian.org/debian trixie/main amd64 ruby3.1 amd64 3.1.2-8.4 [664 kB] Get:1066 http://deb.debian.org/debian trixie/main amd64 ruby-rubygems all 3.4.20-1 [309 kB] Get:1067 http://deb.debian.org/debian trixie/main amd64 ruby amd64 1:3.1+nmu1 [5584 B] Get:1068 http://deb.debian.org/debian trixie/main amd64 rake all 13.2.1-1 [65.2 kB] Get:1069 http://deb.debian.org/debian trixie/main amd64 ruby-net-telnet all 0.2.0-1 [13.1 kB] Get:1070 http://deb.debian.org/debian trixie/main amd64 ruby-webrick all 1.8.1-1 [51.4 kB] Get:1071 http://deb.debian.org/debian trixie/main amd64 ruby-xmlrpc all 0.3.3-2 [24.4 kB] Get:1072 http://deb.debian.org/debian trixie/main amd64 ruby-sdbm amd64 1.0.0-5+b4 [15.4 kB] Get:1073 http://deb.debian.org/debian trixie/main amd64 libyaml-0-2 amd64 0.2.5-1+b1 [52.6 kB] Get:1074 http://deb.debian.org/debian trixie/main amd64 libruby3.1t64 amd64 3.1.2-8.4 [5411 kB] Get:1075 http://deb.debian.org/debian trixie/main amd64 libruby amd64 1:3.1+nmu1 [4664 B] Get:1076 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules amd64 2.1.28+dfsg1-8 [66.5 kB] Get:1077 http://deb.debian.org/debian trixie/main amd64 libset-scalar-perl all 1.29-3 [32.1 kB] Get:1078 http://deb.debian.org/debian trixie/main amd64 libsort-naturally-perl all 1.03-4 [13.1 kB] Get:1079 http://deb.debian.org/debian trixie/main amd64 libspreadsheet-writeexcel-perl all 2.40-4 [503 kB] Get:1080 http://deb.debian.org/debian trixie/main amd64 libunicode-map-perl amd64 0.112-13+b3 [145 kB] Get:1081 http://deb.debian.org/debian trixie/main amd64 libspreadsheet-parseexcel-perl all 0.6600-1 [126 kB] Get:1082 http://deb.debian.org/debian trixie/main amd64 libsprng2 amd64 2.0a-16 [76.4 kB] Get:1083 http://deb.debian.org/debian trixie/main amd64 libsquizz amd64 0.99d+dfsg-3 [269 kB] Get:1084 http://deb.debian.org/debian trixie/main amd64 libstaden-read14t64 amd64 1.15.0-1.1+b1 [266 kB] Get:1085 http://deb.debian.org/debian trixie/main amd64 libstatistics-descriptive-perl all 3.0801-1 [62.8 kB] Get:1086 http://deb.debian.org/debian trixie/main amd64 libsvg-graph-perl all 0.02-4 [105 kB] Get:1087 http://deb.debian.org/debian trixie/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-4 [62.5 kB] Get:1088 http://deb.debian.org/debian trixie/main amd64 libtbb-dev amd64 2021.12.0-1 [193 kB] Get:1089 http://deb.debian.org/debian trixie/main amd64 libteckit0 amd64 2.5.12+ds1-1 [339 kB] Get:1090 http://deb.debian.org/debian trixie/main amd64 libtest-pod-perl all 1.52-3 [12.6 kB] Get:1091 http://deb.debian.org/debian trixie/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-4 [114 kB] Get:1092 http://deb.debian.org/debian trixie/main amd64 libtext-csv-xs-perl amd64 1.56-1 [133 kB] Get:1093 http://deb.debian.org/debian trixie/main amd64 libtie-ixhash-perl all 1.23-4 [11.7 kB] Get:1094 http://deb.debian.org/debian trixie/main amd64 libtirpc-dev amd64 1.3.4+ds-1.3 [189 kB] Get:1095 http://deb.debian.org/debian trixie/main amd64 libtype-tiny-xs-perl amd64 0.025-2 [25.8 kB] Get:1096 http://deb.debian.org/debian trixie/main amd64 libvdpau-va-gl1 amd64 0.4.2-2 [74.3 kB] Get:1097 http://deb.debian.org/debian trixie/main amd64 libx11-protocol-perl all 0.56-9 [120 kB] Get:1098 http://deb.debian.org/debian trixie/main amd64 libxml-filter-buffertext-perl all 1.01-7 [7136 B] Get:1099 http://deb.debian.org/debian trixie/main amd64 libxml-libxslt-perl amd64 2.002001-1+b2 [47.6 kB] Get:1100 http://deb.debian.org/debian trixie/main amd64 libxml-sax-writer-perl all 0.57-3 [19.6 kB] Get:1101 http://deb.debian.org/debian trixie/main amd64 libxmlrpc-lite-perl all 0.717-5 [22.4 kB] Get:1102 http://deb.debian.org/debian trixie/main amd64 libxstring-perl amd64 0.005-2+b3 [8088 B] Get:1103 http://deb.debian.org/debian trixie/main amd64 libyaml-libyaml-perl amd64 0.89+ds-1+b1 [35.0 kB] Get:1104 http://deb.debian.org/debian trixie/main amd64 libyaml-perl all 1.31-1 [64.8 kB] Get:1105 http://deb.debian.org/debian trixie/main amd64 libzzip-0-13t64 amd64 0.13.72+dfsg.1-1.2+b1 [56.2 kB] Get:1106 http://deb.debian.org/debian trixie/main amd64 linux-sysctl-defaults all 4.10.1 [4904 B] Get:1107 http://deb.debian.org/debian trixie/main amd64 zip amd64 3.0-14 [233 kB] Get:1108 http://deb.debian.org/debian trixie/main amd64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get:1109 http://deb.debian.org/debian trixie/main amd64 r-base-core amd64 4.4.1-3 [28.3 MB] Get:1110 http://deb.debian.org/debian trixie/main amd64 r-cran-littler amd64 0.3.20-1 [102 kB] Get:1111 http://deb.debian.org/debian trixie/main amd64 littler all 0.3.20-1 [16.0 kB] Get:1112 http://deb.debian.org/debian trixie/main amd64 tex-common all 6.18 [32.5 kB] Get:1113 http://deb.debian.org/debian trixie/main amd64 lmodern all 2.005-1 [9480 kB] Get:1114 http://deb.debian.org/debian trixie/main amd64 loki amd64 2.4.7.4-10 [362 kB] Get:1115 http://deb.debian.org/debian trixie/main amd64 luit amd64 2.0.20221028-1 [53.8 kB] Get:1116 http://deb.debian.org/debian trixie/main amd64 lynx-common all 2.9.2-1 [1193 kB] Get:1117 http://deb.debian.org/debian trixie/main amd64 lynx amd64 2.9.2-1 [641 kB] Get:1118 http://deb.debian.org/debian trixie/main amd64 python3-cykhash amd64 2.0.0-3+b1 [410 kB] Get:1119 http://deb.debian.org/debian trixie/main amd64 python3-joblib all 1.3.2-2 [218 kB] Get:1120 http://deb.debian.org/debian trixie/main amd64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get:1121 http://deb.debian.org/debian trixie/main amd64 python3-sklearn-lib amd64 1.4.2+dfsg-6 [3657 kB] Get:1122 http://deb.debian.org/debian trixie/main amd64 python3-sklearn all 1.4.2+dfsg-6 [2248 kB] Get:1123 http://deb.debian.org/debian trixie/main amd64 python3-hmmlearn amd64 0.3.0-5+b1 [115 kB] Get:1124 http://deb.debian.org/debian trixie/main amd64 macs amd64 3.0.2-1 [3104 kB] Get:1125 http://deb.debian.org/debian trixie/main amd64 mafft amd64 7.505-1 [1078 kB] Get:1126 http://deb.debian.org/debian trixie/main amd64 mailcap all 3.72 [32.6 kB] Get:1127 http://deb.debian.org/debian trixie/main amd64 manpages-dev all 6.8-2 [2041 kB] Get:1128 http://deb.debian.org/debian trixie/main amd64 mapsembler2 amd64 2.2.4+dfsg1-4 [724 kB] Get:1129 http://deb.debian.org/debian trixie/main amd64 maq amd64 0.7.1-10 [302 kB] Get:1130 http://deb.debian.org/debian trixie/main amd64 med-config all 3.8.1 [11.1 kB] Get:1131 http://deb.debian.org/debian trixie/main amd64 med-tasks all 3.8.1 [8704 B] Get:1132 http://deb.debian.org/debian trixie/main amd64 med-cloud all 3.8.1 [9840 B] Get:1133 http://deb.debian.org/debian trixie/main amd64 melting all 5.2.0-2 [3666 kB] Get:1134 http://deb.debian.org/debian trixie/main amd64 mesa-va-drivers amd64 24.2.2-1 [4288 kB] Get:1135 http://deb.debian.org/debian trixie/main amd64 mesa-vdpau-drivers amd64 24.2.2-1 [3966 kB] Get:1136 http://deb.debian.org/debian trixie/main amd64 mesa-vulkan-drivers amd64 24.2.2-1 [13.5 MB] Get:1137 http://deb.debian.org/debian trixie/main amd64 minia amd64 3.2.6-4+b1 [401 kB] Get:1138 http://deb.debian.org/debian trixie/main amd64 mipe all 1.1-9 [62.8 kB] Get:1139 http://deb.debian.org/debian trixie/main amd64 mlv-smile amd64 1.47-8 [189 kB] Get:1140 http://deb.debian.org/debian trixie/main amd64 mothur amd64 1.48.1-1 [5057 kB] Get:1141 http://deb.debian.org/debian trixie/main amd64 mpi-default-bin amd64 1.17 [2372 B] Get:1142 http://deb.debian.org/debian trixie/main amd64 mrbayes amd64 3.2.7a-7+b1 [661 kB] Get:1143 http://deb.debian.org/debian trixie/main amd64 mupdf-tools amd64 1.24.8+ds2-2+b2 [47.4 MB] Get:1144 http://deb.debian.org/debian trixie/main amd64 muscle amd64 1:5.1.0-1 [297 kB] Get:1145 http://deb.debian.org/debian trixie/main amd64 mustang amd64 3.2.4-1 [105 kB] Get:1146 http://deb.debian.org/debian trixie/main amd64 ncbi-blast+ amd64 2.16.0+ds-6 [15.2 MB] Get:1147 http://deb.debian.org/debian trixie/main amd64 ncbi-blast+-legacy all 2.16.0+ds-6 [10.4 kB] Get:1148 http://deb.debian.org/debian trixie/main amd64 ncbi-epcr amd64 2.3.12-1-10 [174 kB] Get:1149 http://deb.debian.org/debian trixie/main amd64 ncbi-tools-bin amd64 6.1.20170106+dfsg2-4 [1932 kB] Get:1150 http://deb.debian.org/debian trixie/main amd64 ncoils amd64 2002-9 [22.2 kB] Get:1151 http://deb.debian.org/debian trixie/main amd64 neobio all 0.0.20030929-6 [292 kB] Get:1152 http://deb.debian.org/debian trixie/main amd64 netpbm amd64 2:11.07.00-2 [2061 kB] Get:1153 http://deb.debian.org/debian trixie/main amd64 node-bootstrap-sass all 3.4.3-2 [186 kB] Get:1154 http://deb.debian.org/debian trixie/main amd64 node-highlight.js all 9.18.5+dfsg1-2 [333 kB] Get:1155 http://deb.debian.org/debian trixie/main amd64 node-html5shiv all 3.7.3+dfsg-5 [13.2 kB] Get:1156 http://deb.debian.org/debian trixie/main amd64 node-jquery all 3.6.1+dfsg+~3.5.14-1 [160 kB] Get:1157 http://deb.debian.org/debian trixie/main amd64 node-jquery-ui all 1.13.2+dfsg-1 [242 kB] Get:1158 http://deb.debian.org/debian trixie/main amd64 node-normalize.css all 8.0.1-5 [12.7 kB] Get:1159 http://deb.debian.org/debian trixie/main amd64 nodejs-doc all 20.17.0+dfsg-2 [3809 kB] Get:1160 http://deb.debian.org/debian trixie/main amd64 pal2nal all 14.1-3 [17.8 kB] Get:1161 http://deb.debian.org/debian trixie/main amd64 paml amd64 4.9j+dfsg-5 [714 kB] Get:1162 http://deb.debian.org/debian trixie/main amd64 pandoc-data all 3.1.3-3 [446 kB] Get:1163 http://deb.debian.org/debian trixie/main amd64 pandoc amd64 3.1.3+ds-3+b1 [24.3 MB] Get:1164 http://deb.debian.org/debian trixie/main amd64 paraclu amd64 10-1 [14.0 kB] Get:1165 http://deb.debian.org/debian trixie/main amd64 sysstat amd64 12.7.5-2 [623 kB] Get:1166 http://deb.debian.org/debian trixie/main amd64 parallel all 20240222+ds-2 [2163 kB] Get:1167 http://deb.debian.org/debian trixie/main amd64 parsinsert amd64 1.04-15 [69.7 kB] Get:1168 http://deb.debian.org/debian trixie/main amd64 python3-roman all 4.2-1 [10.4 kB] Get:1169 http://deb.debian.org/debian trixie/main amd64 python3-docutils all 0.21.2+dfsg-2 [403 kB] Get:1170 http://deb.debian.org/debian trixie/main amd64 python3-pdbx all 2.0.1-2 [17.4 kB] Get:1171 http://deb.debian.org/debian trixie/main amd64 python3-propka all 3.5.1-1 [68.0 kB] Get:1172 http://deb.debian.org/debian trixie/main amd64 python3-certifi all 2024.8.30-1 [159 kB] Get:1173 http://deb.debian.org/debian trixie/main amd64 python3-charset-normalizer amd64 3.3.2-4 [117 kB] Get:1174 http://deb.debian.org/debian trixie/main amd64 python3-idna all 3.8-2 [41.6 kB] Get:1175 http://deb.debian.org/debian trixie/main amd64 python3-urllib3 all 2.0.7-2 [111 kB] Get:1176 http://deb.debian.org/debian trixie/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get:1177 http://deb.debian.org/debian trixie/main amd64 python3-pdb2pqr all 3.6.1+dfsg-1 [136 kB] Get:1178 http://deb.debian.org/debian trixie/main amd64 pdb2pqr all 3.6.1+dfsg-1 [11.5 kB] Get:1179 http://deb.debian.org/debian trixie/main amd64 perl-doc all 5.38.2-5 [7833 kB] Get:1180 http://deb.debian.org/debian trixie/main amd64 perl-tk amd64 1:804.036+dfsg1-3 [1987 kB] Get:1181 http://deb.debian.org/debian trixie/main amd64 perm amd64 0.4.0-8+b1 [127 kB] Get:1182 http://deb.debian.org/debian trixie/main amd64 phylip amd64 1:3.697+dfsg-4 [957 kB] Get:1183 http://deb.debian.org/debian trixie/main amd64 phyml amd64 3:3.3.20220408-3+b1 [1105 kB] Get:1184 http://deb.debian.org/debian trixie/main amd64 phyutility amd64 2.7.3+dfsg-4 [894 kB] Get:1185 http://deb.debian.org/debian trixie/main amd64 picard-tools all 3.1.1+dfsg-1 [311 kB] Get:1186 http://deb.debian.org/debian trixie/main amd64 pkgconf-bin amd64 1.8.1-3 [29.9 kB] Get:1187 http://deb.debian.org/debian trixie/main amd64 pkgconf amd64 1.8.1-3 [26.1 kB] Get:1188 http://deb.debian.org/debian trixie/main amd64 plink amd64 1.07+dfsg-4+b1 [1239 kB] Get:1189 http://deb.debian.org/debian trixie/main amd64 plink1.9 amd64 1.90~b7.2-231211-1 [896 kB] Get:1190 http://deb.debian.org/debian trixie/main amd64 plink2 amd64 2.00~a5.8-231123+dfsg-1+b1 [2558 kB] Get:1191 http://deb.debian.org/debian trixie/main amd64 poa amd64 2.0+20060928-9 [53.3 kB] Get:1192 http://deb.debian.org/debian trixie/main amd64 pocketsphinx-en-us all 0.8+5prealpha+1-15 [24.3 MB] Get:1193 http://deb.debian.org/debian trixie/main amd64 prank amd64 0.0.170427+dfsg-3 [395 kB] Get:1194 http://deb.debian.org/debian trixie/main amd64 prime-phylo amd64 1.0.11-12 [857 kB] Get:1195 http://deb.debian.org/debian trixie/main amd64 primer3 amd64 2.6.1-4 [202 kB] Get:1196 http://deb.debian.org/debian trixie/main amd64 probabel amd64 0.5.0+dfsg-6 [598 kB] Get:1197 http://deb.debian.org/debian trixie/main amd64 probalign amd64 1.4-10 [70.6 kB] Get:1198 http://deb.debian.org/debian trixie/main amd64 probcons amd64 1.12-14 [119 kB] Get:1199 http://deb.debian.org/debian trixie/main amd64 proda amd64 1.0-14 [65.4 kB] Get:1200 http://deb.debian.org/debian trixie/main amd64 prodigal amd64 1:2.6.3-6 [508 kB] Get:1201 http://deb.debian.org/debian trixie/main amd64 proj-bin amd64 9.5.0-1 [223 kB] Get:1202 http://deb.debian.org/debian trixie/main amd64 psmisc amd64 23.7-1 [266 kB] Get:1203 http://deb.debian.org/debian trixie/main amd64 publicsuffix all 20231001.0357-0.1 [125 kB] Get:1204 http://deb.debian.org/debian trixie/main amd64 python-babel-localedata all 2.14.0-1 [5701 kB] Get:1205 http://deb.debian.org/debian trixie/main amd64 python-biopython-doc all 1.83+dfsg1-5 [17.4 MB] Get:1206 http://deb.debian.org/debian trixie/main amd64 python3-argcomplete all 3.4.0-2 [39.4 kB] Get:1207 http://deb.debian.org/debian trixie/main amd64 python3-argh all 0.31.2-1 [26.5 kB] Get:1208 http://deb.debian.org/debian trixie/main amd64 python3-babel all 2.14.0-1 [111 kB] Get:1209 http://deb.debian.org/debian trixie/main amd64 python3-elasticsearch all 7.17.6-1 [113 kB] Get:1210 http://deb.debian.org/debian trixie/main amd64 python3-biomaj3-core all 3.0.28-2 [25.0 kB] Get:1211 http://deb.debian.org/debian trixie/main amd64 python3-biomaj3-cli all 3.1.11-5 [18.9 kB] Get:1212 http://deb.debian.org/debian trixie/main amd64 python3-soupsieve all 2.6-1 [38.3 kB] Get:1213 http://deb.debian.org/debian trixie/main amd64 python3-bs4 all 4.12.3-3 [133 kB] Get:1214 http://deb.debian.org/debian trixie/main amd64 python3-cffi-backend amd64 1.17.1-1 [87.1 kB] Get:1215 http://deb.debian.org/debian trixie/main amd64 python3-cssselect all 1.2.0-4 [21.7 kB] Get:1216 http://deb.debian.org/debian trixie/main amd64 python3-pyfaidx all 0.8.1.2-1 [29.0 kB] Get:1217 http://deb.debian.org/debian trixie/main amd64 python3-simplejson amd64 3.19.3-1 [61.2 kB] Get:1218 http://deb.debian.org/debian trixie/main amd64 python3-gffutils all 0.13-1 [1041 kB] Get:1219 http://deb.debian.org/debian trixie/main amd64 python3-hisat2 all 2.2.1-5 [14.0 kB] Get:1220 http://deb.debian.org/debian trixie/main amd64 python3-webencodings all 0.5.1-5 [11.1 kB] Get:1221 http://deb.debian.org/debian trixie/main amd64 python3-html5lib all 1.1-6 [90.5 kB] Get:1222 http://deb.debian.org/debian trixie/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get:1223 http://deb.debian.org/debian trixie/main amd64 python3-markupsafe amd64 2.1.5-1+b1 [13.6 kB] Get:1224 http://deb.debian.org/debian trixie/main amd64 python3-jinja2 all 3.1.3-1 [119 kB] Get:1225 http://deb.debian.org/debian trixie/main amd64 python3-olefile all 0.46-3 [36.1 kB] Get:1226 http://deb.debian.org/debian trixie/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get:1227 http://deb.debian.org/debian trixie/main amd64 python3-psutil amd64 5.9.8-2 [225 kB] Get:1228 http://deb.debian.org/debian trixie/main amd64 python3-pybedtools amd64 0.10.0-1+b1 [12.2 MB] Get:1229 http://deb.debian.org/debian trixie/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get:1230 http://deb.debian.org/debian trixie/main amd64 python3-pytest all 8.3.2-1 [249 kB] Get:1231 http://deb.debian.org/debian trixie/main amd64 python3-tzlocal all 5.2-1.1 [23.7 kB] Get:1232 http://deb.debian.org/debian trixie/main amd64 python3-rpy2 amd64 3.5.16-3 [207 kB] Get:1233 http://deb.debian.org/debian trixie/main amd64 xauth amd64 1:1.1.2-1 [36.0 kB] Get:1234 http://deb.debian.org/debian trixie/main amd64 r-base-dev all 4.4.1-3 [4512 B] Get:1235 http://deb.debian.org/debian trixie/main amd64 r-bioc-biocgenerics all 0.50.0-2 [607 kB] Get:1236 http://deb.debian.org/debian trixie/main amd64 r-bioc-biobase amd64 2.64.0-4 [2132 kB] Get:1237 http://deb.debian.org/debian trixie/main amd64 r-cran-base64enc amd64 0.1-3-3 [27.9 kB] Get:1238 http://deb.debian.org/debian trixie/main amd64 r-cran-digest amd64 0.6.37-1 [206 kB] Get:1239 http://deb.debian.org/debian trixie/main amd64 r-cran-fastmap amd64 1.2.0-1 [72.2 kB] Get:1240 http://deb.debian.org/debian trixie/main amd64 r-cran-rlang amd64 1.1.4-1 [1712 kB] Get:1241 http://deb.debian.org/debian trixie/main amd64 r-cran-htmltools amd64 0.5.8.1-1 [378 kB] Get:1242 http://deb.debian.org/debian trixie/main amd64 r-cran-evaluate all 0.24.0-1 [93.7 kB] Get:1243 http://deb.debian.org/debian trixie/main amd64 r-cran-xfun amd64 0.47+dfsg-1 [527 kB] Get:1244 http://deb.debian.org/debian trixie/main amd64 r-cran-highr all 0.11+dfsg-1 [38.3 kB] Get:1245 http://deb.debian.org/debian trixie/main amd64 r-cran-yaml amd64 2.3.10-1 [108 kB] Get:1246 http://deb.debian.org/debian trixie/main amd64 r-cran-knitr all 1.48+dfsg-1 [912 kB] Get:1247 http://deb.debian.org/debian trixie/main amd64 r-cran-cachem amd64 1.1.0-1 [73.9 kB] Get:1248 http://deb.debian.org/debian trixie/main amd64 r-cran-jquerylib all 0.1.4+dfsg-4 [13.1 kB] Get:1249 http://deb.debian.org/debian trixie/main amd64 r-cran-jsonlite amd64 1.8.8+dfsg-1 [443 kB] Get:1250 http://deb.debian.org/debian trixie/main amd64 r-cran-cli amd64 3.6.3-1 [1342 kB] Get:1251 http://deb.debian.org/debian trixie/main amd64 r-cran-glue amd64 1.7.0-1 [157 kB] Get:1252 http://deb.debian.org/debian trixie/main amd64 r-cran-lifecycle all 1.0.4+dfsg-1 [110 kB] Get:1253 http://deb.debian.org/debian trixie/main amd64 r-cran-memoise all 2.0.1-1 [53.8 kB] Get:1254 http://deb.debian.org/debian trixie/main amd64 r-cran-mime amd64 0.12-2 [35.6 kB] Get:1255 http://deb.debian.org/debian trixie/main amd64 r-cran-fs amd64 1.6.4+dfsg-1 [247 kB] Get:1256 http://deb.debian.org/debian trixie/main amd64 r-cran-r6 all 2.5.1-1 [105 kB] Get:1257 http://deb.debian.org/debian trixie/main amd64 r-cran-rappdirs amd64 0.3.3-1 [47.4 kB] Get:1258 http://deb.debian.org/debian trixie/main amd64 r-cran-sass amd64 0.4.9+dfsg-1 [965 kB] Get:1259 http://deb.debian.org/debian trixie/main amd64 r-cran-bslib all 0.7.0+dfsg-1 [4365 kB] Get:1260 http://deb.debian.org/debian trixie/main amd64 r-cran-fontawesome all 0.5.2-1 [1286 kB] Get:1261 http://deb.debian.org/debian trixie/main amd64 r-cran-tinytex all 0.51-1 [146 kB] Get:1262 http://deb.debian.org/debian trixie/main amd64 r-cran-pkgkitten all 0.2.4-1 [29.1 kB] Get:1263 http://deb.debian.org/debian trixie/main amd64 r-cran-rcpp amd64 1.0.13-1 [2082 kB] Get:1264 http://deb.debian.org/debian trixie/main amd64 r-cran-later amd64 1.3.2+dfsg-1 [118 kB] Get:1265 http://deb.debian.org/debian trixie/main amd64 r-cran-magrittr amd64 2.0.3-1 [201 kB] Get:1266 http://deb.debian.org/debian trixie/main amd64 r-cran-promises amd64 1.3.0+dfsg-1 [284 kB] Get:1267 http://deb.debian.org/debian trixie/main amd64 r-cran-httpuv amd64 1.6.15+dfsg-1 [493 kB] Get:1268 http://deb.debian.org/debian trixie/main amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] Get:1269 http://deb.debian.org/debian trixie/main amd64 r-cran-sourcetools amd64 0.1.7-1-1 [45.9 kB] Get:1270 http://deb.debian.org/debian trixie/main amd64 r-cran-crayon all 1.5.2-1 [165 kB] Get:1271 http://deb.debian.org/debian trixie/main amd64 r-cran-withr all 3.0.0+dfsg-1 [240 kB] Get:1272 http://deb.debian.org/debian trixie/main amd64 r-cran-commonmark amd64 1.9.1-1 [119 kB] Get:1273 http://deb.debian.org/debian trixie/main amd64 r-cran-shiny all 1.8.1.1+dfsg-1 [2894 kB] Get:1274 http://deb.debian.org/debian trixie/main amd64 r-cran-rmarkdown all 2.28+dfsg-1 [1474 kB] Get:1275 http://deb.debian.org/debian trixie/main amd64 r-cran-bookdown all 0.40+dfsg-1 [1404 kB] Get:1276 http://deb.debian.org/debian trixie/main amd64 r-cran-biocmanager all 1.30.25+dfsg-1 [132 kB] Get:1277 http://deb.debian.org/debian trixie/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:1278 http://deb.debian.org/debian trixie/main amd64 texlive-binaries amd64 2024.20240313.70630+ds-4 [8493 kB] Get:1279 http://deb.debian.org/debian trixie/main amd64 texlive-base all 2024.20240829-2 [22.7 MB] Get:1280 http://deb.debian.org/debian trixie/main amd64 texlive-latex-base all 2024.20240829-2 [1273 kB] Get:1281 http://deb.debian.org/debian trixie/main amd64 texlive-bibtex-extra all 2024.20240829-1 [79.9 MB] Get:1282 http://deb.debian.org/debian trixie/main amd64 r-bioc-biocversion all 3.19.1-1 [10.9 kB] Get:1283 http://deb.debian.org/debian trixie/main amd64 r-bioc-biocstyle all 2.32.1+dfsg-1 [453 kB] Get:1284 http://deb.debian.org/debian trixie/main amd64 r-cran-statmod amd64 1.5.0-1 [295 kB] Get:1285 http://deb.debian.org/debian trixie/main amd64 r-bioc-limma amd64 3.60.4+dfsg-1 [2006 kB] Get:1286 http://deb.debian.org/debian trixie/main amd64 r-cran-lattice amd64 0.22-6-1 [1392 kB] Get:1287 http://deb.debian.org/debian trixie/main amd64 r-cran-locfit amd64 1.5-9.10-1 [515 kB] Get:1288 http://deb.debian.org/debian trixie/main amd64 r-bioc-edger amd64 4.2.1+dfsg-1 [1182 kB] Get:1289 http://deb.debian.org/debian trixie/main amd64 r-bioc-graph amd64 1.82.0-1 [1289 kB] Get:1290 http://deb.debian.org/debian trixie/main amd64 r-bioc-hilbertvis amd64 1.62.0-1 [888 kB] Get:1291 http://deb.debian.org/debian trixie/main amd64 r-cran-abind all 1.4-8-1 [68.1 kB] Get:1292 http://deb.debian.org/debian trixie/main amd64 r-cran-acepack amd64 1.4.2-1 [59.3 kB] Get:1293 http://deb.debian.org/debian trixie/main amd64 r-cran-expint amd64 0.1-8-1 [209 kB] Get:1294 http://deb.debian.org/debian trixie/main amd64 r-cran-actuar amd64 3.3-4-1 [1404 kB] Get:1295 http://deb.debian.org/debian trixie/main amd64 r-cran-admisc amd64 0.36-1 [367 kB] Get:1296 http://deb.debian.org/debian trixie/main amd64 r-cran-cardata all 3.0.5-1 [1797 kB] Get:1297 http://deb.debian.org/debian trixie/main amd64 r-cran-mass amd64 7.3-61-1 [1112 kB] Get:1298 http://deb.debian.org/debian trixie/main amd64 r-cran-nlme amd64 3.1.166-1 [2330 kB] Get:1299 http://deb.debian.org/debian trixie/main amd64 r-cran-matrix amd64 1.7-0-3 [4127 kB] Get:1300 http://deb.debian.org/debian trixie/main amd64 r-cran-mgcv amd64 1.9-1-1 [3233 kB] Get:1301 http://deb.debian.org/debian trixie/main amd64 r-cran-nnet amd64 7.3-19-2 [111 kB] Get:1302 http://deb.debian.org/debian trixie/main amd64 r-cran-boot all 1.3-31-1 [639 kB] Get:1303 http://deb.debian.org/debian trixie/main amd64 r-cran-minqa amd64 1.2.8-1 [118 kB] Get:1304 http://deb.debian.org/debian trixie/main amd64 r-cran-nloptr amd64 2.1.1-1 [256 kB] Get:1305 http://deb.debian.org/debian trixie/main amd64 r-cran-rcppeigen amd64 0.3.4.0.2-1 [1411 kB] Get:1306 http://deb.debian.org/debian trixie/main amd64 r-cran-lme4 amd64 1.1-35.5-1 [4126 kB] Get:1307 http://deb.debian.org/debian trixie/main amd64 r-cran-backports amd64 1.4.1-1 [101 kB] Get:1308 http://deb.debian.org/debian trixie/main amd64 r-cran-generics all 0.1.3-1 [81.4 kB] Get:1309 http://deb.debian.org/debian trixie/main amd64 r-cran-fansi amd64 1.0.5-1 [621 kB] Get:1310 http://deb.debian.org/debian trixie/main amd64 r-cran-utf8 amd64 1.2.4-1 [133 kB] Get:1311 http://deb.debian.org/debian trixie/main amd64 r-cran-vctrs amd64 0.6.5-1 [1375 kB] Get:1312 http://deb.debian.org/debian trixie/main amd64 r-cran-pillar all 1.9.0+dfsg-1 [463 kB] Get:1313 http://deb.debian.org/debian trixie/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get:1314 http://deb.debian.org/debian trixie/main amd64 r-cran-tibble amd64 3.2.1+dfsg-2 [420 kB] Get:1315 http://deb.debian.org/debian trixie/main amd64 r-cran-tidyselect amd64 1.2.1+dfsg-1 [223 kB] Get:1316 http://deb.debian.org/debian trixie/main amd64 r-cran-dplyr amd64 1.1.4-1 [1524 kB] Get:1317 http://deb.debian.org/debian trixie/main amd64 r-cran-purrr amd64 1.0.2-1 [507 kB] Get:1318 http://deb.debian.org/debian trixie/main amd64 r-cran-stringi amd64 1.8.4-1 [895 kB] Get:1319 http://deb.debian.org/debian trixie/main amd64 r-cran-stringr all 1.5.1-1 [296 kB] Get:1320 http://deb.debian.org/debian trixie/main amd64 r-cran-cpp11 all 0.4.7-1 [219 kB] Get:1321 http://deb.debian.org/debian trixie/main amd64 r-cran-tidyr amd64 1.3.1-1 [1163 kB] Get:1322 http://deb.debian.org/debian trixie/main amd64 r-cran-broom all 1.0.6+dfsg-1 [1844 kB] Get:1323 http://deb.debian.org/debian trixie/main amd64 r-cran-numderiv all 2016.8-1.1-3 [115 kB] Get:1324 http://deb.debian.org/debian trixie/main amd64 r-cran-gtable all 0.3.5+dfsg-1 [222 kB] Get:1325 http://deb.debian.org/debian trixie/main amd64 r-cran-isoband amd64 0.2.7-1 [1614 kB] Get:1326 http://deb.debian.org/debian trixie/main amd64 r-cran-farver amd64 2.1.2-1 [1411 kB] Get:1327 http://deb.debian.org/debian trixie/main amd64 r-cran-labeling all 0.4.3-1 [62.4 kB] Get:1328 http://deb.debian.org/debian trixie/main amd64 r-cran-colorspace amd64 2.1-0+dfsg-1 [1692 kB] Get:1329 http://deb.debian.org/debian trixie/main amd64 r-cran-munsell all 0.5.1-1 [237 kB] Get:1330 http://deb.debian.org/debian trixie/main amd64 r-cran-rcolorbrewer all 1.1-3-1 [54.7 kB] Get:1331 http://deb.debian.org/debian trixie/main amd64 r-cran-viridislite all 0.4.2-2 [1299 kB] Get:1332 http://deb.debian.org/debian trixie/main amd64 r-cran-scales all 1.3.0-1 [677 kB] Get:1333 http://deb.debian.org/debian trixie/main amd64 r-cran-ggplot2 all 3.5.1+dfsg-1 [3933 kB] Get:1334 http://deb.debian.org/debian trixie/main amd64 r-cran-cowplot all 1.1.3+dfsg-1 [638 kB] Get:1335 http://deb.debian.org/debian trixie/main amd64 r-cran-deriv all 4.1.6-1 [151 kB] Get:1336 http://deb.debian.org/debian trixie/main amd64 r-cran-modelr all 0.1.11-1 [204 kB] Get:1337 http://deb.debian.org/debian trixie/main amd64 r-cran-microbenchmark amd64 1.5.0-1 [67.1 kB] Get:1338 http://deb.debian.org/debian trixie/main amd64 r-cran-doby all 4.6.22-2 [4619 kB] Get:1339 http://deb.debian.org/debian trixie/main amd64 r-cran-pbkrtest all 0.5.3-1 [180 kB] Get:1340 http://deb.debian.org/debian trixie/main amd64 r-cran-sparsem amd64 1.84-2-1+b1 [794 kB] Get:1341 http://deb.debian.org/debian trixie/main amd64 r-cran-matrixmodels all 0.5-3-1 [364 kB] Get:1342 http://deb.debian.org/debian trixie/main amd64 r-cran-survival amd64 3.7-0-1 [6305 kB] Get:1343 http://deb.debian.org/debian trixie/main amd64 r-cran-matrixstats amd64 1.4.1-1 [510 kB] Get:1344 http://deb.debian.org/debian trixie/main amd64 r-cran-rcpparmadillo amd64 14.0.2-1-1 [863 kB] Get:1345 http://deb.debian.org/debian trixie/main amd64 r-cran-class amd64 7.3-22-2 [87.3 kB] Get:1346 http://deb.debian.org/debian trixie/main amd64 r-cran-proxy amd64 0.4-27-1 [182 kB] Get:1347 http://deb.debian.org/debian trixie/main amd64 r-cran-e1071 amd64 1.7-16-1 [562 kB] Get:1348 http://deb.debian.org/debian trixie/main amd64 r-cran-codetools all 0.2-20-1 [91.1 kB] Get:1349 http://deb.debian.org/debian trixie/main amd64 r-cran-iterators all 1.0.14-1 [337 kB] Get:1350 http://deb.debian.org/debian trixie/main amd64 r-cran-foreach all 1.5.2-1 [122 kB] Get:1351 http://deb.debian.org/debian trixie/main amd64 r-cran-data.table amd64 1.15.4+dfsg-2.2 [1847 kB] Get:1352 http://deb.debian.org/debian trixie/main amd64 r-cran-modelmetrics amd64 1.2.2.2-1+b1 [125 kB] Get:1353 http://deb.debian.org/debian trixie/main amd64 r-cran-plyr amd64 1.8.9-1 [832 kB] Get:1354 http://deb.debian.org/debian trixie/main amd64 r-cran-proc amd64 1.18.5-1 [987 kB] Get:1355 http://deb.debian.org/debian trixie/main amd64 r-cran-tzdb amd64 0.4.0-2 [499 kB] Get:1356 http://deb.debian.org/debian trixie/main amd64 r-cran-clock amd64 0.7.0-1.1 [1738 kB] Get:1357 http://deb.debian.org/debian trixie/main amd64 r-cran-ellipsis amd64 0.3.2-2 [35.1 kB] Get:1358 http://deb.debian.org/debian trixie/main amd64 r-cran-gower amd64 1.0.1-1 [207 kB] Get:1359 http://deb.debian.org/debian trixie/main amd64 r-cran-hardhat all 1.4.0+dfsg-1 [668 kB] Get:1360 http://deb.debian.org/debian trixie/main amd64 r-cran-rpart amd64 4.1.23-1 [685 kB] Get:1361 http://deb.debian.org/debian trixie/main amd64 r-cran-shape all 1.4.6-1 [770 kB] Get:1362 http://deb.debian.org/debian trixie/main amd64 r-cran-diagram all 1.6.5-2 [656 kB] Get:1363 http://deb.debian.org/debian trixie/main amd64 r-cran-kernsmooth amd64 2.23-24-1 [92.7 kB] Get:1364 http://deb.debian.org/debian trixie/main amd64 r-cran-globals all 0.16.3-1 [120 kB] Get:1365 http://deb.debian.org/debian trixie/main amd64 r-cran-listenv all 0.9.1+dfsg-1 [112 kB] Get:1366 http://deb.debian.org/debian trixie/main amd64 r-cran-parallelly amd64 1.38.0-1 [388 kB] Get:1367 http://deb.debian.org/debian trixie/main amd64 r-cran-future all 1.34.0+dfsg-1 [649 kB] Get:1368 http://deb.debian.org/debian trixie/main amd64 r-cran-future.apply all 1.11.2+dfsg-1 [172 kB] Get:1369 http://deb.debian.org/debian trixie/main amd64 r-cran-progressr all 0.14.0-1 [337 kB] Get:1370 http://deb.debian.org/debian trixie/main amd64 r-cran-squarem all 2021.1-1 [179 kB] Get:1371 http://deb.debian.org/debian trixie/main amd64 r-cran-lava all 1.7.3+dfsg-1 [2207 kB] Get:1372 http://deb.debian.org/debian trixie/main amd64 r-cran-prodlim amd64 2024.06.25-1 [416 kB] Get:1373 http://deb.debian.org/debian trixie/main amd64 r-cran-ipred amd64 0.9-15-1 [387 kB] Get:1374 http://deb.debian.org/debian trixie/main amd64 r-cran-timechange amd64 0.3.0-1 [173 kB] Get:1375 http://deb.debian.org/debian trixie/main amd64 r-cran-lubridate amd64 1.9.3+dfsg-1 [1018 kB] Get:1376 http://deb.debian.org/debian trixie/main amd64 r-cran-timedate amd64 4032.109-1 [1227 kB] Get:1377 http://deb.debian.org/debian trixie/main amd64 r-cran-recipes all 1.0.10+dfsg-2 [2014 kB] Get:1378 http://deb.debian.org/debian trixie/main amd64 r-cran-reshape2 amd64 1.4.4-2 [114 kB] Get:1379 http://deb.debian.org/debian trixie/main amd64 r-cran-caret amd64 6.0-94+dfsg-1 [3446 kB] Get:1380 http://deb.debian.org/debian trixie/main amd64 r-cran-conquer amd64 1.3.3-1 [471 kB] Get:1381 http://deb.debian.org/debian trixie/main amd64 r-cran-quantreg amd64 5.98-1 [1544 kB] Get:1382 http://deb.debian.org/debian trixie/main amd64 r-cran-foreign amd64 0.8.87-1 [253 kB] Get:1383 http://deb.debian.org/debian trixie/main amd64 r-cran-forcats all 1.0.0-1 [413 kB] Get:1384 http://deb.debian.org/debian trixie/main amd64 r-cran-hms all 1.1.3-1 [104 kB] Get:1385 http://deb.debian.org/debian trixie/main amd64 r-cran-clipr all 0.8.0-1 [53.0 kB] Get:1386 http://deb.debian.org/debian trixie/main amd64 r-cran-bit amd64 4.0.5-1 [1070 kB] Get:1387 http://deb.debian.org/debian trixie/main amd64 r-cran-bit64 amd64 4.0.5-1 [463 kB] Get:1388 http://deb.debian.org/debian trixie/main amd64 r-cran-prettyunits all 1.2.0-1 [162 kB] Get:1389 http://deb.debian.org/debian trixie/main amd64 r-cran-progress all 1.2.3-1 [93.0 kB] Get:1390 http://deb.debian.org/debian trixie/main amd64 r-cran-vroom amd64 1.6.5-1 [830 kB] Get:1391 http://deb.debian.org/debian trixie/main amd64 r-cran-readr amd64 2.1.5-1 [759 kB] Get:1392 http://deb.debian.org/debian trixie/main amd64 r-cran-haven amd64 2.5.4-1 [342 kB] Get:1393 http://deb.debian.org/debian trixie/main amd64 r-cran-curl amd64 5.2.2+dfsg-1 [179 kB] Get:1394 http://deb.debian.org/debian trixie/main amd64 r-cran-rematch all 2.0.0-1 [18.2 kB] Get:1395 http://deb.debian.org/debian trixie/main amd64 r-cran-cellranger all 1.1.0-3 [100 kB] Get:1396 http://deb.debian.org/debian trixie/main amd64 r-cran-readxl amd64 1.4.3-1 [723 kB] Get:1397 http://deb.debian.org/debian trixie/main amd64 r-cran-writexl amd64 1.5.0-1 [147 kB] Get:1398 http://deb.debian.org/debian trixie/main amd64 r-cran-r.methodss3 all 1.8.2-1 [84.5 kB] Get:1399 http://deb.debian.org/debian trixie/main amd64 r-cran-r.oo all 1.26.0-1 [961 kB] Get:1400 http://deb.debian.org/debian trixie/main amd64 r-cran-r.utils all 2.12.3-1 [1396 kB] Get:1401 http://deb.debian.org/debian trixie/main amd64 r-cran-zip amd64 2.3.1-1 [118 kB] Get:1402 http://deb.debian.org/debian trixie/main amd64 r-cran-openxlsx amd64 4.2.7-1 [2051 kB] Get:1403 http://deb.debian.org/debian trixie/main amd64 r-cran-rio all 1.2.2-1 [531 kB] Get:1404 http://deb.debian.org/debian trixie/main amd64 r-cran-car all 3.1-2-3 [1728 kB] Get:1405 http://deb.debian.org/debian trixie/main amd64 r-cran-zoo amd64 1.8-12-2 [986 kB] Get:1406 http://deb.debian.org/debian trixie/main amd64 r-cran-lmtest amd64 0.9.40-1 [399 kB] Get:1407 http://deb.debian.org/debian trixie/main amd64 r-cran-sandwich all 3.1-1-1 [1488 kB] Get:1408 http://deb.debian.org/debian trixie/main amd64 r-cran-formula all 1.2-5-1 [158 kB] Get:1409 http://deb.debian.org/debian trixie/main amd64 r-cran-aer all 1.2-12-1 [2595 kB] Get:1410 http://deb.debian.org/debian trixie/main amd64 r-cran-lmertest all 3.1-3-2 [545 kB] Get:1411 http://deb.debian.org/debian trixie/main amd64 r-cran-afex all 1.4-1-1 [3481 kB] Get:1412 http://deb.debian.org/debian trixie/main amd64 r-cran-amelia amd64 1.8.2-1 [1434 kB] Get:1413 http://deb.debian.org/debian trixie/main amd64 r-cran-ape amd64 5.8-1 [2920 kB] Get:1414 http://deb.debian.org/debian trixie/main amd64 r-cran-coda all 0.19-4.1-1 [329 kB] Get:1415 http://deb.debian.org/debian trixie/main amd64 r-cran-arm all 1.14-4-1 [429 kB] Get:1416 http://deb.debian.org/debian trixie/main amd64 r-cran-sys amd64 3.4.2-1 [43.7 kB] Get:1417 http://deb.debian.org/debian trixie/main amd64 r-cran-askpass amd64 1.2.0-1 [24.0 kB] Get:1418 http://deb.debian.org/debian trixie/main amd64 r-cran-av amd64 0.9.0+dfsg-1+b1 [81.5 kB] Get:1419 http://deb.debian.org/debian trixie/main amd64 r-cran-base64url amd64 1.4-2+b1 [26.4 kB] Get:1420 http://deb.debian.org/debian trixie/main amd64 r-cran-checkmate amd64 2.3.1-1 [678 kB] Get:1421 http://deb.debian.org/debian trixie/main amd64 r-cran-bbmisc amd64 1.13-1 [317 kB] Get:1422 http://deb.debian.org/debian trixie/main amd64 r-cran-brew all 1.0-10-1 [70.1 kB] Get:1423 http://deb.debian.org/debian trixie/main amd64 r-cran-dbi all 1.2.3-1 [852 kB] Get:1424 http://deb.debian.org/debian trixie/main amd64 r-cran-blob all 1.2.4-1 [49.6 kB] Get:1425 http://deb.debian.org/debian trixie/main amd64 r-cran-plogr all 0.2.0-3 [14.9 kB] Get:1426 http://deb.debian.org/debian trixie/main amd64 r-cran-rsqlite amd64 2.3.7-2 [1187 kB] Get:1427 http://deb.debian.org/debian trixie/main amd64 r-cran-sendmailr all 1.4-0-1 [58.3 kB] Get:1428 http://deb.debian.org/debian trixie/main amd64 r-cran-batchjobs all 1.9-1 [503 kB] Get:1429 http://deb.debian.org/debian trixie/main amd64 r-cran-batchtools amd64 0.9.17+dfsg-1 [712 kB] Get:1430 http://deb.debian.org/debian trixie/main amd64 r-cran-pbapply all 1.7-2-1 [103 kB] Get:1431 http://deb.debian.org/debian trixie/main amd64 r-cran-mvtnorm amd64 1.3-1-1 [886 kB] Get:1432 http://deb.debian.org/debian trixie/main amd64 r-cran-elliptic all 1.4-0-2 [1240 kB] Get:1433 http://deb.debian.org/debian trixie/main amd64 r-cran-contfrac amd64 1.1-12-2 [26.5 kB] Get:1434 http://deb.debian.org/debian trixie/main amd64 r-cran-desolve amd64 1.40-1 [2236 kB] Get:1435 http://deb.debian.org/debian trixie/main amd64 r-cran-hypergeo all 1.2-13-4 [361 kB] Get:1436 http://deb.debian.org/debian trixie/main amd64 r-cran-bayesfactor amd64 0.9.12-4.7+dfsg-1 [950 kB] Get:1437 http://deb.debian.org/debian trixie/main amd64 r-cran-ggridges all 0.5.6-1 [2204 kB] Get:1438 http://deb.debian.org/debian trixie/main amd64 r-cran-tensora amd64 0.36.2.1-1 [223 kB] Get:1439 http://deb.debian.org/debian trixie/main amd64 r-cran-distributional all 0.4.0-1 [420 kB] Get:1440 http://deb.debian.org/debian trixie/main amd64 r-cran-posterior all 1.5.0+dfsg-1 [860 kB] Get:1441 http://deb.debian.org/debian trixie/main amd64 r-cran-bayesplot all 1.11.1-1 [5279 kB] Get:1442 http://deb.debian.org/debian trixie/main amd64 r-cran-bdsmatrix amd64 1.3-7-1 [300 kB] Get:1443 http://deb.debian.org/debian trixie/main amd64 r-cran-bbmle all 1.0.25.1-1 [859 kB] Get:1444 http://deb.debian.org/debian trixie/main amd64 r-cran-beeswarm amd64 0.4.0-1+b1 [82.4 kB] Get:1445 http://deb.debian.org/debian trixie/main amd64 r-cran-profmem all 0.6.0+dfsg-1 [46.5 kB] Get:1446 http://deb.debian.org/debian trixie/main amd64 r-cran-bench amd64 1.1.3-1 [395 kB] Get:1447 http://deb.debian.org/debian trixie/main amd64 r-cran-bh all 1.84.0-1 [5912 B] Get:1448 http://deb.debian.org/debian trixie/main amd64 r-cran-biasedurn amd64 2.0.11-1 [277 kB] Get:1449 http://deb.debian.org/debian trixie/main amd64 r-cran-bitops amd64 1.0-8-1 [30.7 kB] Get:1450 http://deb.debian.org/debian trixie/main amd64 r-cran-blme all 1.0-5-1 [431 kB] Get:1451 http://deb.debian.org/debian trixie/main amd64 r-cran-enrichwith all 0.3.1+dfsg-2 [213 kB] Get:1452 http://deb.debian.org/debian trixie/main amd64 r-cran-brglm2 amd64 0.9.2+dfsg-1 [348 kB] Get:1453 http://deb.debian.org/debian trixie/main amd64 r-cran-brobdingnag all 1.2-9-1 [940 kB] Get:1454 http://deb.debian.org/debian trixie/main amd64 r-cran-bridgesampling all 1.1-2-1 [1476 kB] Get:1455 http://deb.debian.org/debian trixie/main amd64 r-cran-brio amd64 1.1.5-1 [38.3 kB] Get:1456 http://deb.debian.org/debian trixie/main amd64 r-cran-rcppparallel amd64 5.1.7+dfsg-5+b1 [307 kB] Get:1457 http://deb.debian.org/debian trixie/main amd64 r-cran-stanheaders amd64 2.32.5-1 [1320 kB] Get:1458 http://deb.debian.org/debian trixie/main amd64 r-cran-inline all 0.3.19-2 [129 kB] Get:1459 http://deb.debian.org/debian trixie/main amd64 r-cran-gridextra all 2.3-3 [1024 kB] Get:1460 http://deb.debian.org/debian trixie/main amd64 r-cran-loo all 2.8.0-1 [3071 kB] Get:1461 http://deb.debian.org/debian trixie/main amd64 r-cran-ps amd64 1.7.7-1 [320 kB] Get:1462 http://deb.debian.org/debian trixie/main amd64 r-cran-processx amd64 3.8.4-1 [352 kB] Get:1463 http://deb.debian.org/debian trixie/main amd64 r-cran-callr all 3.7.6-1 [460 kB] Get:1464 http://deb.debian.org/debian trixie/main amd64 r-cran-desc all 1.4.3-1 [351 kB] Get:1465 http://deb.debian.org/debian trixie/main amd64 r-cran-pkgbuild all 1.4.4-1 [213 kB] Get:1466 http://deb.debian.org/debian trixie/main amd64 r-cran-quickjsr amd64 1.1.3-1 [598 kB] Get:1467 http://deb.debian.org/debian trixie/main amd64 r-cran-rstan amd64 2.32.5-2 [1966 kB] Get:1468 http://deb.debian.org/debian trixie/main amd64 r-cran-rstantools all 2.4.0-1 [174 kB] Get:1469 http://deb.debian.org/debian trixie/main amd64 r-cran-htmlwidgets all 1.6.4+dfsg-1 [123 kB] Get:1470 http://deb.debian.org/debian trixie/main amd64 r-cran-miniui all 0.1.1.1-3 [35.9 kB] Get:1471 http://deb.debian.org/debian trixie/main amd64 r-cran-shinyjs all 2.1.0-1 [1009 kB] Get:1472 http://deb.debian.org/debian trixie/main amd64 r-cran-colourpicker all 1.3.0+dfsg-1 [1212 kB] Get:1473 http://deb.debian.org/debian trixie/main amd64 r-cran-lazyeval amd64 0.2.2-1+b1 [142 kB] Get:1474 http://deb.debian.org/debian trixie/main amd64 r-cran-crosstalk all 1.2.1+dfsg-1 [175 kB] Get:1475 http://deb.debian.org/debian trixie/main amd64 r-cran-dt all 0.33+dfsg-1 [248 kB] Get:1476 http://deb.debian.org/debian trixie/main amd64 r-cran-xts amd64 0.14.0-1 [757 kB] Get:1477 http://deb.debian.org/debian trixie/main amd64 r-cran-dygraphs all 1.1.1.6+dfsg-4 [317 kB] Get:1478 http://deb.debian.org/debian trixie/main amd64 r-cran-gtools amd64 3.9.5-1 [362 kB] Get:1479 http://deb.debian.org/debian trixie/main amd64 r-cran-markdown all 1.12+dfsg-2 [179 kB] Get:1480 http://deb.debian.org/debian trixie/main amd64 r-cran-shinythemes all 1.2.0+dfsg-1 [428 kB] Get:1481 http://deb.debian.org/debian trixie/main amd64 r-cran-igraph amd64 2.0.3-1 [5037 kB] Get:1482 http://deb.debian.org/debian trixie/main amd64 r-cran-threejs all 0.3.3+dfsg-2 [881 kB] Get:1483 http://deb.debian.org/debian trixie/main amd64 r-cran-shinystan all 2.6.0-1 [2563 kB] Get:1484 http://deb.debian.org/debian trixie/main amd64 r-cran-nleqslv amd64 3.3.5-1 [99.5 kB] Get:1485 http://deb.debian.org/debian trixie/main amd64 r-cran-brms all 2.20.4-1 [6171 kB] Get:1486 http://deb.debian.org/debian trixie/main amd64 r-cran-labelled all 2.12.0-2 [297 kB] Get:1487 http://deb.debian.org/debian trixie/main amd64 r-cran-broom.helpers all 1.14.0-2 [549 kB] Get:1488 http://deb.debian.org/debian trixie/main amd64 r-cran-furrr all 0.3.1-1 [1022 kB] Get:1489 http://deb.debian.org/debian trixie/main amd64 r-cran-broom.mixed all 0.2.9.5-1 [5329 kB] Get:1490 http://deb.debian.org/debian trixie/main amd64 r-cran-ca all 0.71.1-2 [242 kB] Get:1491 http://deb.debian.org/debian trixie/main amd64 r-cran-cairo amd64 1.6-2-1 [79.0 kB] Get:1492 http://deb.debian.org/debian trixie/main amd64 r-cran-catools amd64 1.18.2-1+b1 [204 kB] Get:1493 http://deb.debian.org/debian trixie/main amd64 r-cran-cba amd64 0.2-25-1 [260 kB] Get:1494 http://deb.debian.org/debian trixie/main amd64 r-cran-chk all 0.9.1-1 [350 kB] Get:1495 http://deb.debian.org/debian trixie/main amd64 r-cran-chron amd64 2.3-61-2 [194 kB] Get:1496 http://deb.debian.org/debian trixie/main amd64 r-cran-clubsandwich all 0.5.11-1 [637 kB] Get:1497 http://deb.debian.org/debian trixie/main amd64 r-cran-cluster amd64 2.1.6-1 [568 kB] Get:1498 http://deb.debian.org/debian trixie/main amd64 r-cran-cmprsk amd64 2.2-11-1 [102 kB] Get:1499 http://deb.debian.org/debian trixie/main amd64 r-cran-libcoin amd64 1.0-10-1 [769 kB] Get:1500 http://deb.debian.org/debian trixie/main amd64 r-cran-modeltools all 0.2-23-2 [214 kB] Get:1501 http://deb.debian.org/debian trixie/main amd64 r-cran-th.data all 1.1-2-2 [8801 kB] Get:1502 http://deb.debian.org/debian trixie/main amd64 r-cran-multcomp all 1.4-26-2 [700 kB] Get:1503 http://deb.debian.org/debian trixie/main amd64 r-cran-coin amd64 1.4-3-1 [1565 kB] Get:1504 http://deb.debian.org/debian trixie/main amd64 r-cran-collapse amd64 2.0.16-1 [3311 kB] Get:1505 http://deb.debian.org/debian trixie/main amd64 r-cran-conflicted all 1.2.0-1.1 [60.8 kB] Get:1506 http://deb.debian.org/debian trixie/main amd64 r-cran-corrplot all 0.94-1 [134 kB] Get:1507 http://deb.debian.org/debian trixie/main amd64 r-cran-rex all 1.2.1-1 [124 kB] Get:1508 http://deb.debian.org/debian trixie/main amd64 r-cran-openssl amd64 2.2.0+dfsg-1 [401 kB] Get:1509 http://deb.debian.org/debian trixie/main amd64 r-cran-httr all 1.4.7+dfsg-1 [459 kB] Get:1510 http://deb.debian.org/debian trixie/main amd64 r-cran-covr amd64 3.6.4+dfsg-1 [307 kB] Get:1511 http://deb.debian.org/debian trixie/main amd64 r-cran-credentials all 2.0.1-1 [216 kB] Get:1512 http://deb.debian.org/debian trixie/main amd64 r-cran-rbibutils amd64 2.2.16-1 [675 kB] Get:1513 http://deb.debian.org/debian trixie/main amd64 r-cran-rdpack all 2.6.1-1 [757 kB] Get:1514 http://deb.debian.org/debian trixie/main amd64 r-cran-gbutils all 0.5-3 [251 kB] Get:1515 http://deb.debian.org/debian trixie/main amd64 r-cran-cvar all 0.5-2 [258 kB] Get:1516 http://deb.debian.org/debian trixie/main amd64 r-cran-kernlab amd64 0.9-33-1 [1948 kB] Get:1517 http://deb.debian.org/debian trixie/main amd64 r-cran-cvst all 0.2-3-1 [86.4 kB] Get:1518 http://deb.debian.org/debian trixie/main amd64 r-cran-remotes all 2.5.0+dfsg-1 [449 kB] Get:1519 http://deb.debian.org/debian trixie/main amd64 r-cran-cyclocomp all 1.1.1-1 [33.2 kB] Get:1520 http://deb.debian.org/debian trixie/main amd64 r-cran-insight all 0.20.4+dfsg-1 [2028 kB] Get:1521 http://deb.debian.org/debian trixie/main amd64 r-cran-datawizard all 0.12.3+dfsg-1 [1132 kB] Get:1522 http://deb.debian.org/debian trixie/main amd64 r-cran-date amd64 1.2.42-1 [50.9 kB] Get:1523 http://deb.debian.org/debian trixie/main amd64 r-cran-nanoarrow amd64 0.4.0-1 [282 kB] Get:1524 http://deb.debian.org/debian trixie/main amd64 r-cran-palmerpenguins all 0.1.1-1 [2975 kB] Get:1525 http://deb.debian.org/debian trixie/main amd64 r-cran-rprojroot all 2.0.4-1 [124 kB] Get:1526 http://deb.debian.org/debian trixie/main amd64 r-cran-pkgload all 1.4.0-1 [247 kB] Get:1527 http://deb.debian.org/debian trixie/main amd64 r-cran-praise all 1.0.0-4 [20.1 kB] Get:1528 http://deb.debian.org/debian trixie/main amd64 r-cran-diffobj amd64 0.3.5-1+b1 [1122 kB] Get:1529 http://deb.debian.org/debian trixie/main amd64 r-cran-rematch2 all 2.1.2-2 [46.3 kB] Get:1530 http://deb.debian.org/debian trixie/main amd64 r-cran-waldo all 0.5.3-1 [121 kB] Get:1531 http://deb.debian.org/debian trixie/main amd64 r-cran-testthat amd64 3.2.1.1-1 [1619 kB] Get:1532 http://deb.debian.org/debian trixie/main amd64 r-cran-dbitest all 1.8.0-1 [1891 kB] Get:1533 http://deb.debian.org/debian trixie/main amd64 r-cran-dbplyr all 2.4.0+dfsg-1 [1188 kB] Get:1534 http://deb.debian.org/debian trixie/main amd64 r-cran-dbscan amd64 1.2-0+ds-1 [1159 kB] Get:1535 http://deb.debian.org/debian trixie/main amd64 r-cran-deoptimr all 1.1-3-1 [74.4 kB] Get:1536 http://deb.debian.org/debian trixie/main amd64 r-cran-robustbase amd64 0.99-4-1 [3049 kB] Get:1537 http://deb.debian.org/debian trixie/main amd64 r-cran-sfsmisc all 1.1-18-1 [672 kB] Get:1538 http://deb.debian.org/debian trixie/main amd64 r-cran-magic all 1.6-1-1 [400 kB] Get:1539 http://deb.debian.org/debian trixie/main amd64 r-cran-lpsolve amd64 5.6.21-1 [327 kB] Get:1540 http://deb.debian.org/debian trixie/main amd64 r-cran-linprog all 0.9-4-1 [75.0 kB] Get:1541 http://deb.debian.org/debian trixie/main amd64 r-cran-rcppprogress all 0.4.2-2 [21.8 kB] Get:1542 http://deb.debian.org/debian trixie/main amd64 r-cran-geometry amd64 0.4.7-1 [822 kB] Get:1543 http://deb.debian.org/debian trixie/main amd64 r-cran-ddalpha amd64 1.3.15-1 [1191 kB] Get:1544 http://deb.debian.org/debian trixie/main amd64 r-cran-decor amd64 1.0.2-1 [32.6 kB] Get:1545 http://deb.debian.org/debian trixie/main amd64 r-cran-deldir amd64 2.0-4-1 [286 kB] Get:1546 http://deb.debian.org/debian trixie/main amd64 r-cran-viridis all 0.6.5-1 [2991 kB] Get:1547 http://deb.debian.org/debian trixie/main amd64 r-cran-dendextend all 1.17.1+dfsg-1 [1071 kB] Get:1548 http://deb.debian.org/debian trixie/main amd64 r-cran-rstudioapi all 0.16.0-1 [292 kB] Get:1549 http://deb.debian.org/debian trixie/main amd64 r-cran-gert amd64 2.1.1+dfsg-1 [250 kB] Get:1550 http://deb.debian.org/debian trixie/main amd64 r-cran-gitcreds all 0.1.2-1 [92.7 kB] Get:1551 http://deb.debian.org/debian trixie/main amd64 r-cran-httr2 all 1.0.4-1 [652 kB] Get:1552 http://deb.debian.org/debian trixie/main amd64 r-cran-ini all 0.3.1-2 [15.6 kB] Get:1553 http://deb.debian.org/debian trixie/main amd64 r-cran-gh all 1.4.1-1 [126 kB] Get:1554 http://deb.debian.org/debian trixie/main amd64 r-cran-whisker all 0.4.1-1 [62.3 kB] Get:1555 http://deb.debian.org/debian trixie/main amd64 r-cran-usethis all 3.0.0-1 [937 kB] Get:1556 http://deb.debian.org/debian trixie/main amd64 r-cran-downlit all 0.4.4-1 [127 kB] Get:1557 http://deb.debian.org/debian trixie/main amd64 r-cran-systemfonts amd64 1.1.0-1 [238 kB] Get:1558 http://deb.debian.org/debian trixie/main amd64 r-cran-textshaping amd64 0.3.7-2 [91.3 kB] Get:1559 http://deb.debian.org/debian trixie/main amd64 r-cran-ragg amd64 1.3.2-1 [491 kB] Get:1560 http://deb.debian.org/debian trixie/main amd64 r-cran-xml2 amd64 1.3.6-1 [320 kB] Get:1561 http://deb.debian.org/debian trixie/main amd64 r-cran-pkgdown all 2.0.7-2 [852 kB] Get:1562 http://deb.debian.org/debian trixie/main amd64 r-cran-profvis amd64 0.3.8+dfsg-1 [104 kB] Get:1563 http://deb.debian.org/debian trixie/main amd64 r-cran-sessioninfo all 1.2.2-1 [268 kB] Get:1564 http://deb.debian.org/debian trixie/main amd64 r-cran-xopen all 1.0.1+dfsg-1 [21.4 kB] Get:1565 http://deb.debian.org/debian trixie/main amd64 r-cran-rcmdcheck all 1.4.0-2 [206 kB] Get:1566 http://deb.debian.org/debian trixie/main amd64 r-cran-roxygen2 amd64 7.3.2-1 [730 kB] Get:1567 http://deb.debian.org/debian trixie/main amd64 r-cran-rversions all 2.1.2-1 [67.1 kB] Get:1568 http://deb.debian.org/debian trixie/main amd64 r-cran-urlchecker all 1.0.1-2 [33.5 kB] Get:1569 http://deb.debian.org/debian trixie/main amd64 r-cran-devtools all 2.4.5-1 [676 kB] Get:1570 http://deb.debian.org/debian trixie/main amd64 r-cran-dfoptim all 2023.1.0-1 [75.1 kB] Get:1571 http://deb.debian.org/debian trixie/main amd64 r-cran-dicedesign amd64 1.10-1 [318 kB] Get:1572 http://deb.debian.org/debian trixie/main amd64 r-cran-dials all 1.2.1-1 [427 kB] Get:1573 http://deb.debian.org/debian trixie/main amd64 r-cran-dichromat all 1:2.0-0.1-1 [149 kB] Get:1574 http://deb.debian.org/debian trixie/main amd64 r-cran-drr all 0.0.4-2 [145 kB] Get:1575 http://deb.debian.org/debian trixie/main amd64 r-cran-dimred amd64 0.2.6-4 [1561 kB] Get:1576 http://deb.debian.org/debian trixie/main amd64 r-cran-diptest amd64 0.77-0-1 [185 kB] Get:1577 http://deb.debian.org/debian trixie/main amd64 r-cran-docopt all 0.7.1-2 [249 kB] Get:1578 http://deb.debian.org/debian trixie/main amd64 r-cran-domc all 1.3.8-1 [168 kB] Get:1579 http://deb.debian.org/debian trixie/main amd64 r-cran-doparallel all 1.0.17-1 [188 kB] Get:1580 http://deb.debian.org/debian trixie/main amd64 r-cran-rngtools all 1.5.2-1 [83.4 kB] Get:1581 http://deb.debian.org/debian trixie/main amd64 r-cran-dorng all 1.8.6-1 [309 kB] Get:1582 http://deb.debian.org/debian trixie/main amd64 r-cran-dotcall64 amd64 1.1-1-1 [33.9 kB] Get:1583 http://deb.debian.org/debian trixie/main amd64 r-cran-dtplyr all 1.3.1-1 [375 kB] Get:1584 http://deb.debian.org/debian trixie/main amd64 r-cran-dynlm all 0.3.6-2 [54.5 kB] Get:1585 http://deb.debian.org/debian trixie/main amd64 r-cran-eaf amd64 2.5-1+b1 [2139 kB] Get:1586 http://deb.debian.org/debian trixie/main amd64 r-cran-plotrix all 3.8-4-1 [1119 kB] Get:1587 http://deb.debian.org/debian trixie/main amd64 r-cran-plotmo all 3.6.4-1 [1479 kB] Get:1588 http://deb.debian.org/debian trixie/main amd64 r-cran-earth amd64 5.3.3-1 [1900 kB] Get:1589 http://deb.debian.org/debian trixie/main amd64 r-cran-mitools all 2.4-2 [264 kB] Get:1590 http://deb.debian.org/debian trixie/main amd64 r-cran-survey all 4.2-1-1 [3202 kB] Get:1591 http://deb.debian.org/debian trixie/main amd64 r-cran-estimability all 1.5-1 [50.4 kB] Get:1592 http://deb.debian.org/debian trixie/main amd64 r-cran-effects all 4.2.2-1 [2344 kB] Get:1593 http://deb.debian.org/debian trixie/main amd64 r-cran-ellipse all 0.5.0-1 [217 kB] Get:1594 http://deb.debian.org/debian trixie/main amd64 r-cran-emdbook all 1.3.13+ds-1 [202 kB] Get:1595 http://deb.debian.org/debian trixie/main amd64 r-cran-emmeans all 1.10.4+dfsg-1 [1654 kB] Get:1596 http://deb.debian.org/debian trixie/main amd64 r-cran-emoa amd64 0.5-2-1 [139 kB] Get:1597 http://deb.debian.org/debian trixie/main amd64 r-cran-gsl amd64 2.1-8-1+b1 [482 kB] Get:1598 http://deb.debian.org/debian trixie/main amd64 r-cran-energy amd64 1.7-12-1 [308 kB] Get:1599 http://deb.debian.org/debian trixie/main amd64 r-cran-etm amd64 1.1.1-1 [476 kB] Get:1600 http://deb.debian.org/debian trixie/main amd64 r-cran-epi amd64 2.53-1 [3420 kB] Get:1601 http://deb.debian.org/debian trixie/main amd64 r-cran-evd amd64 2.3-7-1 [1749 kB] Get:1602 http://deb.debian.org/debian trixie/main amd64 r-cran-expm amd64 0.999-9-1 [219 kB] Get:1603 http://deb.debian.org/debian trixie/main amd64 r-cran-extradistr amd64 1.10.0-1 [557 kB] Get:1604 http://deb.debian.org/debian trixie/main amd64 r-cran-fastica amd64 1.2-5.1-1 [42.7 kB] Get:1605 http://deb.debian.org/debian trixie/main amd64 r-cran-fastmatch amd64 1.1-4-1 [34.1 kB] Get:1606 http://deb.debian.org/debian trixie/main amd64 r-cran-timeseries all 4041.110-1 [1892 kB] Get:1607 http://deb.debian.org/debian trixie/main amd64 r-cran-spatial amd64 7.3-17-1 [128 kB] Get:1608 http://deb.debian.org/debian trixie/main amd64 r-cran-gss amd64 2.2-7-1 [1679 kB] Get:1609 http://deb.debian.org/debian trixie/main amd64 r-cran-stabledist all 0.7-2-1 [80.6 kB] Get:1610 http://deb.debian.org/debian trixie/main amd64 r-cran-fbasics amd64 4041.97-1 [1509 kB] Get:1611 http://deb.debian.org/debian trixie/main amd64 r-cran-fgarch amd64 4033.92-1 [672 kB] Get:1612 http://deb.debian.org/debian trixie/main amd64 r-cran-spam amd64 2.10-0-1 [2764 kB] Get:1613 http://deb.debian.org/debian trixie/main amd64 r-cran-maps amd64 3.4.2-1 [2012 kB] Get:1614 http://deb.debian.org/debian trixie/main amd64 r-cran-fields amd64 16.2-1 [4395 kB] Get:1615 http://deb.debian.org/debian trixie/main amd64 r-cran-filehash amd64 2.4-5-1 [338 kB] Get:1616 http://deb.debian.org/debian trixie/main amd64 r-cran-fit.models all 0.64-1 [143 kB] Get:1617 http://deb.debian.org/debian trixie/main amd64 r-cran-flexmix all 2.3-19-1 [1666 kB] Get:1618 http://deb.debian.org/debian trixie/main amd64 r-cran-fnn amd64 1.1.4-1 [121 kB] Get:1619 http://deb.debian.org/debian trixie/main amd64 ttf-bitstream-vera all 1.10-8.2 [223 kB] Get:1620 http://deb.debian.org/debian trixie/main amd64 r-cran-fontbitstreamvera all 0.1.1+dfsg-4 [326 kB] Get:1621 http://deb.debian.org/debian trixie/main amd64 r-cran-fontliberation all 0.1.0+dfsg-5 [2282 kB] Get:1622 http://deb.debian.org/debian trixie/main amd64 r-cran-fontquiver all 0.2.1-4 [2131 kB] Get:1623 http://deb.debian.org/debian trixie/main amd64 r-cran-fracdiff amd64 1.5-3-1 [110 kB] Get:1624 http://deb.debian.org/debian trixie/main amd64 r-cran-quadprog amd64 1.5-8-1+b1 [33.6 kB] Get:1625 http://deb.debian.org/debian trixie/main amd64 r-cran-ttr amd64 0.24.4-1 [509 kB] Get:1626 http://deb.debian.org/debian trixie/main amd64 r-cran-quantmod all 0.4.26-1 [1033 kB] Get:1627 http://deb.debian.org/debian trixie/main amd64 r-cran-tseries amd64 0.10-57-1 [382 kB] Get:1628 http://deb.debian.org/debian trixie/main amd64 r-cran-urca amd64 1.3-4-1 [1052 kB] Get:1629 http://deb.debian.org/debian trixie/main amd64 r-cran-forecast amd64 8.23.0-1 [1570 kB] Get:1630 http://deb.debian.org/debian trixie/main amd64 r-cran-formatr all 1.14-2 [152 kB] Get:1631 http://deb.debian.org/debian trixie/main amd64 r-cran-formattable all 0.2.1+dfsg-1 [156 kB] Get:1632 http://deb.debian.org/debian trixie/main amd64 r-cran-mclust amd64 6.1.1-1 [3981 kB] Get:1633 http://deb.debian.org/debian trixie/main amd64 r-cran-prabclus all 2.3-3-1 [523 kB] Get:1634 http://deb.debian.org/debian trixie/main amd64 r-cran-fpc all 2.2-11-1 [870 kB] Get:1635 http://deb.debian.org/debian trixie/main amd64 r-cran-lambda.r all 1.2.4-2 [118 kB] Get:1636 http://deb.debian.org/debian trixie/main amd64 r-cran-futile.options all 1.0.1-3 [20.0 kB] Get:1637 http://deb.debian.org/debian trixie/main amd64 r-cran-futile.logger all 1.4.3-4 [98.4 kB] Get:1638 http://deb.debian.org/debian trixie/main amd64 r-cran-g.data all 2.4.1-1 [133 kB] Get:1639 http://deb.debian.org/debian trixie/main amd64 r-cran-gam amd64 1.22-3-1 [390 kB] Get:1640 http://deb.debian.org/debian trixie/main amd64 r-cran-gamm4 all 0.2-6-2 [59.1 kB] Get:1641 http://deb.debian.org/debian trixie/main amd64 r-cran-gargle all 1.5.2-1 [736 kB] Get:1642 http://deb.debian.org/debian trixie/main amd64 r-cran-gbrd amd64 0.4.12-1 [47.1 kB] Get:1643 http://deb.debian.org/debian trixie/main amd64 r-cran-gclus all 1.3.2-2 [406 kB] Get:1644 http://deb.debian.org/debian trixie/main amd64 r-cran-gdata all 3.0.0-1 [502 kB] Get:1645 http://deb.debian.org/debian trixie/main amd64 r-cran-gee amd64 4.13-27-1 [73.8 kB] Get:1646 http://deb.debian.org/debian trixie/main amd64 r-cran-geepack amd64 1.3.11.1-1 [387 kB] Get:1647 http://deb.debian.org/debian trixie/main amd64 r-cran-sp amd64 1:2.1-2+dfsg-1 [1449 kB] Get:1648 http://deb.debian.org/debian trixie/main amd64 r-cran-geosphere amd64 1.5-18-1 [1001 kB] Get:1649 http://deb.debian.org/debian trixie/main amd64 r-cran-patchwork all 1.2.0-1 [3345 kB] Get:1650 http://deb.debian.org/debian trixie/main amd64 r-cran-ggstats all 0.5.1-2 [828 kB] Get:1651 http://deb.debian.org/debian trixie/main amd64 r-cran-ggally all 2.2.1-1 [2022 kB] Get:1652 http://deb.debian.org/debian trixie/main amd64 r-cran-tweenr amd64 2.0.3-1 [428 kB] Get:1653 http://deb.debian.org/debian trixie/main amd64 r-cran-gganimate all 1.0.8-1 [1209 kB] Get:1654 http://deb.debian.org/debian trixie/main amd64 r-cran-vipor all 0.4.7-1 [4509 kB] Get:1655 http://deb.debian.org/debian trixie/main amd64 r-cran-ggbeeswarm all 0.7.2-1 [1738 kB] Get:1656 http://deb.debian.org/debian trixie/main amd64 r-cran-ggeffects all 1.7.0+dfsg-1 [981 kB] Get:1657 http://deb.debian.org/debian trixie/main amd64 r-cran-polyclip amd64 1.10-7-1 [113 kB] Get:1658 http://deb.debian.org/debian trixie/main amd64 r-cran-ggforce amd64 0.4.2-1 [1815 kB] Get:1659 http://deb.debian.org/debian trixie/main amd64 r-cran-ggfortify all 0.4.17+dfsg-1 [534 kB] Get:1660 http://deb.debian.org/debian trixie/main amd64 r-cran-ggrepel amd64 0.9.5-2 [251 kB] Get:1661 http://deb.debian.org/debian trixie/main amd64 r-cran-ggsci all 3.2.0-1 [2103 kB] Get:1662 http://deb.debian.org/debian trixie/main amd64 r-cran-ggsignif all 0.6.4-1 [589 kB] Get:1663 http://deb.debian.org/debian trixie/main amd64 r-cran-polynom all 1.4-1+dfsg-1 [92.5 kB] Get:1664 http://deb.debian.org/debian trixie/main amd64 r-cran-rstatix all 0.7.2-1 [609 kB] Get:1665 http://deb.debian.org/debian trixie/main amd64 r-cran-ggpubr all 0.6.0-1 [2080 kB] Get:1666 http://deb.debian.org/debian trixie/main amd64 r-cran-git2r amd64 0.33.0+dfsg-1 [437 kB] Get:1667 http://deb.debian.org/debian trixie/main amd64 r-cran-glmnet amd64 4.1-8-1 [1926 kB] Get:1668 http://deb.debian.org/debian trixie/main amd64 r-cran-gmm amd64 1.8-1 [1419 kB] Get:1669 http://deb.debian.org/debian trixie/main amd64 r-cran-gmp amd64 0.7-4-1 [301 kB] Get:1670 http://deb.debian.org/debian trixie/main amd64 r-cran-uuid amd64 1.2-1-1 [46.7 kB] Get:1671 http://deb.debian.org/debian trixie/main amd64 r-cran-googledrive all 2.1.1-1 [1231 kB] Get:1672 http://deb.debian.org/debian trixie/main amd64 r-cran-ids all 1.0.1-2 [124 kB] Get:1673 http://deb.debian.org/debian trixie/main amd64 r-cran-googlesheets4 all 1.1.1-1 [529 kB] Get:1674 http://deb.debian.org/debian trixie/main amd64 r-cran-gparotation all 2024.2-1-1 [408 kB] Get:1675 http://deb.debian.org/debian trixie/main amd64 r-cran-gplots all 3.1.3.1-1 [607 kB] Get:1676 http://deb.debian.org/debian trixie/main amd64 r-cran-gridbase all 0.4-7-5 [163 kB] Get:1677 http://deb.debian.org/debian trixie/main amd64 r-cran-gridgraphics all 0.5-1-1 [248 kB] Get:1678 http://deb.debian.org/debian trixie/main amd64 r-cran-xml amd64 3.99-0.17-1 [1761 kB] Get:1679 http://deb.debian.org/debian trixie/main amd64 r-cran-gridsvg all 1.7-5-1 [1393 kB] Get:1680 http://deb.debian.org/debian trixie/main amd64 r-cran-here all 1.0.1-2 [48.7 kB] Get:1681 http://deb.debian.org/debian trixie/main amd64 r-cran-hexbin amd64 1.28.3-1 [1577 kB] Get:1682 http://deb.debian.org/debian trixie/main amd64 r-cran-htmltable all 2.4.3-1 [389 kB] Get:1683 http://deb.debian.org/debian trixie/main amd64 r-cran-png amd64 0.1-8-1+b1 [41.5 kB] Get:1684 http://deb.debian.org/debian trixie/main amd64 r-cran-jpeg amd64 0.1-10-1 [30.8 kB] Get:1685 http://deb.debian.org/debian trixie/main amd64 r-cran-interp amd64 1.1-6-1 [1445 kB] Get:1686 http://deb.debian.org/debian trixie/main amd64 r-cran-latticeextra all 0.6-30-1 [2194 kB] Get:1687 http://deb.debian.org/debian trixie/main amd64 r-cran-hmisc amd64 5.1-3-1 [3562 kB] Get:1688 http://deb.debian.org/debian trixie/main amd64 r-cran-hsaur3 all 1.0-15-1 [2994 kB] Get:1689 http://deb.debian.org/debian trixie/main amd64 r-cran-httptest2 all 1.1.0+ds-2 [149 kB] Get:1690 http://deb.debian.org/debian trixie/main amd64 r-cran-hunspell amd64 3.0.3+dfsg2-2 [2081 kB] Get:1691 http://deb.debian.org/debian trixie/main amd64 r-cran-statnet.common amd64 4.9.0-1 [260 kB] Get:1692 http://deb.debian.org/debian trixie/main amd64 r-cran-network amd64 1.18.2-1 [833 kB] Get:1693 http://deb.debian.org/debian trixie/main amd64 r-cran-intergraph all 2.0-4-2 [142 kB] Get:1694 http://deb.debian.org/debian trixie/main amd64 r-cran-inum all 1.0-5-1 [45.0 kB] Get:1695 http://deb.debian.org/debian trixie/main amd64 r-cran-irace amd64 3.5-2 [1274 kB] Get:1696 http://deb.debian.org/debian trixie/main amd64 r-cran-repr all 1.1.7-1 [138 kB] Get:1697 http://deb.debian.org/debian trixie/main amd64 r-cran-irdisplay all 1.1-1 [35.2 kB] Get:1698 http://deb.debian.org/debian trixie/main amd64 r-cran-irlba amd64 2.3.5.1-4 [296 kB] Get:1699 http://deb.debian.org/debian trixie/main amd64 r-cran-itertools all 0.1-3-3 [111 kB] Get:1700 http://deb.debian.org/debian trixie/main amd64 r-cran-janeaustenr all 1.0.0-1 [1626 kB] Get:1701 http://deb.debian.org/debian trixie/main amd64 r-cran-ucminf amd64 1.2.2-1 [35.5 kB] Get:1702 http://deb.debian.org/debian trixie/main amd64 r-cran-ordinal amd64 2023.12-4-1 [1268 kB] Get:1703 http://deb.debian.org/debian trixie/main amd64 r-cran-jomo amd64 2.7-6-1 [2025 kB] Get:1704 http://deb.debian.org/debian trixie/main amd64 r-cran-svglite amd64 2.1.3-1+b1 [191 kB] Get:1705 http://deb.debian.org/debian trixie/main amd64 r-cran-kableextra all 1.4.0+dfsg-1 [815 kB] Get:1706 http://deb.debian.org/debian trixie/main amd64 r-cran-kmi all 0.5.5-2 [79.1 kB] Get:1707 http://deb.debian.org/debian trixie/main amd64 r-cran-multicool amd64 1.0.1-1 [99.1 kB] Get:1708 http://deb.debian.org/debian trixie/main amd64 r-cran-pracma all 2.4.4-3 [1722 kB] Get:1709 http://deb.debian.org/debian trixie/main amd64 r-cran-ks amd64 1.14.2-1 [1918 kB] Get:1710 http://deb.debian.org/debian trixie/main amd64 r-cran-mnormt amd64 2.1.1-2 [171 kB] Get:1711 http://deb.debian.org/debian trixie/main amd64 r-cran-pbivnorm amd64 0.6.0-4 [19.6 kB] Get:1712 http://deb.debian.org/debian trixie/main amd64 r-cran-lavaan all 0.6.18-1 [3678 kB] Get:1713 http://deb.debian.org/debian trixie/main amd64 r-cran-lavasearch2 amd64 2.0.3+dfsg-1 [1152 kB] Get:1714 http://deb.debian.org/debian trixie/main amd64 r-cran-lbfgsb3c amd64 2020-3.3-1 [120 kB] Get:1715 http://deb.debian.org/debian trixie/main amd64 r-cran-leaps amd64 3.2-1 [84.1 kB] Get:1716 http://deb.debian.org/debian trixie/main amd64 r-cran-lhs amd64 1.2.0-1 [364 kB] Get:1717 http://deb.debian.org/debian trixie/main amd64 r-cran-xmlparsedata all 1.0.5-2 [20.2 kB] Get:1718 http://deb.debian.org/debian trixie/main amd64 r-cran-lintr all 3.1.2-1 [1362 kB] Get:1719 http://deb.debian.org/debian trixie/main amd64 r-cran-lobstr amd64 1.1.2-1 [146 kB] Get:1720 http://deb.debian.org/debian trixie/main amd64 r-cran-logcondens all 2.1.8-1 [562 kB] Get:1721 http://deb.debian.org/debian trixie/main amd64 r-cran-logspline amd64 2.1.22-1 [158 kB] Get:1722 http://deb.debian.org/debian trixie/main amd64 r-cran-lsmeans all 2.30-0-2 [43.9 kB] Get:1723 http://deb.debian.org/debian trixie/main amd64 r-cran-magick amd64 2.8.3+dfsg-1 [497 kB] Get:1724 http://deb.debian.org/debian trixie/main amd64 r-cran-mapdata amd64 2.3.1-1 [17.0 MB] Get:1725 http://deb.debian.org/debian trixie/main amd64 r-cran-mapproj amd64 1.2.11-1 [52.9 kB] Get:1726 http://deb.debian.org/debian trixie/main amd64 r-cran-marginaleffects amd64 0.21.0-1 [2086 kB] Get:1727 http://deb.debian.org/debian trixie/main amd64 r-cran-matchit amd64 4.5.5-1 [1682 kB] Get:1728 http://deb.debian.org/debian trixie/main amd64 r-cran-mathjaxr all 1.6-0-1 [604 kB] Get:1729 http://deb.debian.org/debian trixie/main amd64 r-cran-misctools all 0.6-28-1 [99.2 kB] Get:1730 http://deb.debian.org/debian trixie/main amd64 r-cran-maxlik all 1.5-2-1 [1557 kB] Get:1731 http://deb.debian.org/debian trixie/main amd64 r-cran-memisc amd64 0.99.31.7+dfsg-1 [1677 kB] Get:1732 http://deb.debian.org/debian trixie/main amd64 r-cran-mclogit all 0.9.6-2 [276 kB] Get:1733 http://deb.debian.org/debian trixie/main amd64 r-cran-mda amd64 0.5-4-1 [728 kB] Get:1734 http://deb.debian.org/debian trixie/main amd64 r-cran-metadat all 1.2-0-2 [831 kB] Get:1735 http://deb.debian.org/debian trixie/main amd64 r-cran-metafor all 4.6-0-1 [4967 kB] Get:1736 http://deb.debian.org/debian trixie/main amd64 r-cran-timereg amd64 2.0.5-1 [973 kB] Get:1737 http://deb.debian.org/debian trixie/main amd64 r-cran-mets amd64 1.3.3+dfsg-1 [3692 kB] Get:1738 http://deb.debian.org/debian trixie/main amd64 r-cran-pan amd64 1.9-1 [942 kB] Get:1739 http://deb.debian.org/debian trixie/main amd64 r-cran-mitml all 0.4-5-1 [511 kB] Get:1740 http://deb.debian.org/debian trixie/main amd64 r-cran-mice amd64 3.16.0-1 [1503 kB] Get:1741 http://deb.debian.org/debian trixie/main amd64 r-cran-mlbench amd64 2.1-5-1 [1052 kB] Get:1742 http://deb.debian.org/debian trixie/main amd64 r-cran-rocr all 1.0-11-3 [457 kB] Get:1743 http://deb.debian.org/debian trixie/main amd64 r-cran-mlmetrics all 1.1.3-1 [74.7 kB] Get:1744 http://deb.debian.org/debian trixie/main amd64 r-cran-mlmrev all 1.0-8-2 [1807 kB] Get:1745 http://deb.debian.org/debian trixie/main amd64 r-cran-paramhelpers amd64 1.14.1-1 [461 kB] Get:1746 http://deb.debian.org/debian trixie/main amd64 r-cran-parallelmap all 1.5.1-1 [111 kB] Get:1747 http://deb.debian.org/debian trixie/main amd64 r-cran-mlr amd64 2.19.1+dfsg-1 [4932 kB] Get:1748 http://deb.debian.org/debian trixie/main amd64 r-cran-mockery all 0.4.4+dfsg-1 [41.0 kB] Get:1749 http://deb.debian.org/debian trixie/main amd64 r-cran-modeldata all 1.4.0-1 [5162 kB] Get:1750 http://deb.debian.org/debian trixie/main amd64 r-cran-msm amd64 1.7.1-1 [1493 kB] Get:1751 http://deb.debian.org/debian trixie/main amd64 r-cran-multcompview all 0.1-9-1 [116 kB] Get:1752 http://deb.debian.org/debian trixie/main amd64 r-cran-ncdf4 amd64 1.22-1+b1 [277 kB] Get:1753 http://deb.debian.org/debian trixie/main amd64 r-cran-registry all 0.5-1-2 [202 kB] Get:1754 http://deb.debian.org/debian trixie/main amd64 r-cran-nmf amd64 0.27-1 [2987 kB] Get:1755 http://deb.debian.org/debian trixie/main amd64 r-cran-nnls amd64 1.5-1 [37.6 kB] Get:1756 http://deb.debian.org/debian trixie/main amd64 r-cran-optimparallel all 1.0-2-2 [206 kB] Get:1757 http://deb.debian.org/debian trixie/main amd64 r-cran-optimx all 2023-10.21-1 [2505 kB] Get:1758 http://deb.debian.org/debian trixie/main amd64 r-cran-packrat all 0.9.2-1 [685 kB] Get:1759 http://deb.debian.org/debian trixie/main amd64 r-cran-polspline amd64 1.1.25-1 [581 kB] Get:1760 http://deb.debian.org/debian trixie/main amd64 r-cran-rms amd64 6.8-2-1 [2242 kB] Get:1761 http://deb.debian.org/debian trixie/main amd64 r-cran-publish all 2023.01.17-1 [466 kB] Get:1762 http://deb.debian.org/debian trixie/main amd64 r-cran-ranger amd64 0.16.0-1 [421 kB] Get:1763 http://deb.debian.org/debian trixie/main amd64 r-cran-riskregression amd64 2023.12.21+ds-1 [1611 kB] Get:1764 http://deb.debian.org/debian trixie/main amd64 r-cran-pec amd64 2023.04.12-1 [510 kB] Get:1765 http://deb.debian.org/debian trixie/main amd64 r-cran-pammtools all 0.5.92-1 [731 kB] Get:1766 http://deb.debian.org/debian trixie/main amd64 r-cran-pander amd64 0.6.5+dfsg-3+deb12u1 [852 kB] Get:1767 http://deb.debian.org/debian trixie/main amd64 r-cran-strucchange amd64 1.5-4-1 [947 kB] Get:1768 http://deb.debian.org/debian trixie/main amd64 r-cran-party amd64 1.3-17-1 [1133 kB] Get:1769 http://deb.debian.org/debian trixie/main amd64 r-cran-partykit amd64 1.2-20-1 [2405 kB] Get:1770 http://deb.debian.org/debian trixie/main amd64 r-cran-patrick all 0.2.0-2 [21.8 kB] Get:1771 http://deb.debian.org/debian trixie/main amd64 r-cran-pbmcapply amd64 1.5.1-1 [41.8 kB] Get:1772 http://deb.debian.org/debian trixie/main amd64 r-cran-pcapp amd64 2.0-5-1 [368 kB] Get:1773 http://deb.debian.org/debian trixie/main amd64 r-cran-qpdf amd64 1.3.3+dfsg-1 [101 kB] Get:1774 http://deb.debian.org/debian trixie/main amd64 r-cran-pdftools amd64 3.4.0-1+b2 [1016 kB] Get:1775 http://deb.debian.org/debian trixie/main amd64 r-cran-permute all 0.9-7-1 [225 kB] Get:1776 http://deb.debian.org/debian trixie/main amd64 r-cran-phangorn amd64 2.11.1+dfsg-1 [1679 kB] Get:1777 http://deb.debian.org/debian trixie/main amd64 r-cran-pingr amd64 2.0.3-1 [42.4 kB] Get:1778 http://deb.debian.org/debian trixie/main amd64 r-cran-pki amd64 0.1-12-2+b1 [106 kB] Get:1779 http://deb.debian.org/debian trixie/main amd64 r-cran-plm all 2.6-4-1 [2127 kB] Get:1780 http://deb.debian.org/debian trixie/main amd64 r-cran-webutils amd64 1.2.1-1 [49.2 kB] Get:1781 http://deb.debian.org/debian trixie/main amd64 r-cran-sodium amd64 1.3.1+dfsg-1 [61.6 kB] Get:1782 http://deb.debian.org/debian trixie/main amd64 r-cran-swagger all 5.17.14-1 [1038 kB] Get:1783 http://deb.debian.org/debian trixie/main amd64 r-cran-plumber all 1.2.1+ds-2 [1094 kB] Get:1784 http://deb.debian.org/debian trixie/main amd64 r-cran-polycor all 0.8-1-1 [74.0 kB] Get:1785 http://deb.debian.org/debian trixie/main amd64 r-cran-poorman all 0.2.7+dfsg-1 [376 kB] Get:1786 http://deb.debian.org/debian trixie/main amd64 r-cran-popepi all 0.4.12+dfsg-1 [1153 kB] Get:1787 http://deb.debian.org/debian trixie/main amd64 r-cran-projpred amd64 2.8.0+dfsg-1 [986 kB] Get:1788 http://deb.debian.org/debian trixie/main amd64 r-cran-pscl amd64 1.5.9-1 [3386 kB] Get:1789 http://deb.debian.org/debian trixie/main amd64 r-cran-psych all 2.4.1-1 [3397 kB] Get:1790 http://deb.debian.org/debian trixie/main amd64 r-cran-psychtools all 2.4.2-1 [3322 kB] Get:1791 http://deb.debian.org/debian trixie/main amd64 r-cran-purrrlyr amd64 0.0.8-1 [103 kB] Get:1792 http://deb.debian.org/debian trixie/main amd64 r-cran-pvclust all 2.2-0-2 [185 kB] Get:1793 http://deb.debian.org/debian trixie/main amd64 r-cran-qap amd64 0.1-2-1 [344 kB] Get:1794 http://deb.debian.org/debian trixie/main amd64 r-cran-qtl amd64 1.70-1 [5544 kB] Get:1795 http://deb.debian.org/debian trixie/main amd64 r-cran-r.cache all 0.16.0-1 [114 kB] Get:1796 http://deb.debian.org/debian trixie/main amd64 r-cran-r.devices all 2.17.2+ds-1 [400 kB] Get:1797 http://deb.debian.org/debian trixie/main amd64 tcl8.6 amd64 8.6.14+dfsg-1 [120 kB] Get:1798 http://deb.debian.org/debian trixie/main amd64 tcl amd64 8.6.14 [4032 B] Get:1799 http://deb.debian.org/debian trixie/main amd64 r-cran-r.rsp all 0.46.0+ds-1 [1405 kB] Get:1800 http://deb.debian.org/debian trixie/main amd64 r-cran-randomforest amd64 4.7-1.1-1 [214 kB] Get:1801 http://deb.debian.org/debian trixie/main amd64 r-cran-rann amd64 2.6.2-1 [44.8 kB] Get:1802 http://deb.debian.org/debian trixie/main amd64 r-cran-terra amd64 1.7-78-1 [3665 kB] Get:1803 http://deb.debian.org/debian trixie/main amd64 r-cran-raster amd64 3.6-26-1 [3105 kB] Get:1804 http://deb.debian.org/debian trixie/main amd64 r-cran-rcppml amd64 0.3.7-2 [173 kB] Get:1805 http://deb.debian.org/debian trixie/main amd64 r-cran-rcpproll amd64 0.3.1-1 [91.5 kB] Get:1806 http://deb.debian.org/debian trixie/main amd64 r-cran-rcpptoml amd64 0.2.2+dfsg-1 [108 kB] Get:1807 http://deb.debian.org/debian trixie/main amd64 r-cran-rcsdp amd64 0.1.57.5-1 [111 kB] Get:1808 http://deb.debian.org/debian trixie/main amd64 r-cran-rcurl amd64 1.98-1.16+dfsg-1 [799 kB] Get:1809 http://deb.debian.org/debian trixie/main amd64 r-cran-relsurv amd64 2.2-9-1 [662 kB] Get:1810 http://deb.debian.org/debian trixie/main amd64 r-cran-renv all 1.0.7-1 [2158 kB] Get:1811 http://deb.debian.org/debian trixie/main amd64 r-cran-reprex all 2.1.0-1 [503 kB] Get:1812 http://deb.debian.org/debian trixie/main amd64 r-cran-reshape all 0.8.9-1 [169 kB] Get:1813 http://deb.debian.org/debian trixie/main amd64 r-cran-reticulate amd64 1.39.0+dfsg-1 [1512 kB] Get:1814 http://deb.debian.org/debian trixie/main amd64 r-cran-rgl amd64 1.3.1-1 [3882 kB] Get:1815 http://deb.debian.org/debian trixie/main amd64 r-cran-rhpcblasctl amd64 0.23-42-1+b1 [26.9 kB] Get:1816 http://deb.debian.org/debian trixie/main amd64 r-cran-rmpfr amd64 0.9-5-1 [1232 kB] Get:1817 http://deb.debian.org/debian trixie/main amd64 r-cran-rmpi amd64 0.7-2-2 [273 kB] Get:1818 http://deb.debian.org/debian trixie/main amd64 r-cran-rmysql amd64 0.10.28-1 [286 kB] Get:1819 http://deb.debian.org/debian trixie/main amd64 r-cran-robumeta all 2.1-1 [521 kB] Get:1820 http://deb.debian.org/debian trixie/main amd64 r-cran-rrcov amd64 1.7-6-1 [2428 kB] Get:1821 http://deb.debian.org/debian trixie/main amd64 r-cran-robust amd64 0.7-4-1 [637 kB] Get:1822 http://deb.debian.org/debian trixie/main amd64 r-cran-rose all 0.0-4-2 [113 kB] Get:1823 http://deb.debian.org/debian trixie/main amd64 r-cran-rpostgresql amd64 0.7-6+dfsg-1 [381 kB] Get:1824 http://deb.debian.org/debian trixie/main amd64 r-cran-warp amd64 0.2.1-1 [70.4 kB] Get:1825 http://deb.debian.org/debian trixie/main amd64 r-cran-slider amd64 0.3.1-1 [317 kB] Get:1826 http://deb.debian.org/debian trixie/main amd64 r-cran-rsample all 1.2.1+dfsg-1 [429 kB] Get:1827 http://deb.debian.org/debian trixie/main amd64 r-cran-rsconnect all 1.3.1-1 [840 kB] Get:1828 http://deb.debian.org/debian trixie/main amd64 r-cran-truncnorm amd64 1.0-9-2 [24.4 kB] Get:1829 http://deb.debian.org/debian trixie/main amd64 r-cran-rsolnp all 1.16+dfsg-4 [251 kB] Get:1830 http://deb.debian.org/debian trixie/main amd64 r-cran-rspectra amd64 0.16-1-1 [389 kB] Get:1831 http://deb.debian.org/debian trixie/main amd64 r-cran-rstanarm amd64 2.32.1-2 [7736 kB] Get:1832 http://deb.debian.org/debian trixie/main amd64 r-cran-rsvg amd64 2.6.0-1+b1 [267 kB] Get:1833 http://deb.debian.org/debian trixie/main amd64 r-cran-rtdists amd64 0.11-5-1 [742 kB] Get:1834 http://deb.debian.org/debian trixie/main amd64 r-cran-rtsne amd64 0.17-1 [105 kB] Get:1835 http://deb.debian.org/debian trixie/main amd64 r-cran-runit all 0.4.33-1 [390 kB] Get:1836 http://deb.debian.org/debian trixie/main amd64 r-cran-selectr all 0.4-2-2 [412 kB] Get:1837 http://deb.debian.org/debian trixie/main amd64 r-cran-rvest all 1.0.4-1 [304 kB] Get:1838 http://deb.debian.org/debian trixie/main amd64 r-cran-rwiener amd64 1.3-3-1+b1 [107 kB] Get:1839 http://deb.debian.org/debian trixie/main amd64 r-cran-scatterplot3d all 0.3-44-1 [353 kB] Get:1840 http://deb.debian.org/debian trixie/main amd64 r-cran-tsp amd64 1.2-4-1 [626 kB] Get:1841 http://deb.debian.org/debian trixie/main amd64 r-cran-vegan amd64 2.6-8+dfsg-1 [3132 kB] Get:1842 http://deb.debian.org/debian trixie/main amd64 r-cran-seriation amd64 1.5.5-1 [1339 kB] Get:1843 http://deb.debian.org/debian trixie/main amd64 r-cran-setrng all 2022.4-1-1 [55.1 kB] Get:1844 http://deb.debian.org/debian trixie/main amd64 r-cran-sjlabelled all 1.2.0-1 [292 kB] Get:1845 http://deb.debian.org/debian trixie/main amd64 r-cran-sm amd64 2.2-6.0-1 [787 kB] Get:1846 http://deb.debian.org/debian trixie/main amd64 r-cran-vgam amd64 1.1-11-1 [7756 kB] Get:1847 http://deb.debian.org/debian trixie/main amd64 r-cran-smcfcs all 1.7.1+dfsg-1 [318 kB] Get:1848 http://deb.debian.org/debian trixie/main amd64 r-cran-sna amd64 2.7-2-1 [1240 kB] Get:1849 http://deb.debian.org/debian trixie/main amd64 r-cran-snakecase all 0.11.0-2 [169 kB] Get:1850 http://deb.debian.org/debian trixie/main amd64 r-cran-spelling all 2.3.0-1 [56.9 kB] Get:1851 http://deb.debian.org/debian trixie/main amd64 r-cran-splines2 amd64 0.5.2-1 [1071 kB] Get:1852 http://deb.debian.org/debian trixie/main amd64 r-cran-systemfit all 1.1-30-1 [1177 kB] Get:1853 http://deb.debian.org/debian trixie/main amd64 r-cran-testit all 0.13-1 [34.8 kB] Get:1854 http://deb.debian.org/debian trixie/main amd64 r-cran-thematic all 0.1.6-1 [2619 kB] Get:1855 http://deb.debian.org/debian trixie/main amd64 r-cran-themis all 1.0.2-2 [307 kB] Get:1856 http://deb.debian.org/debian trixie/main amd64 r-cran-tidyverse all 2.0.0+dfsg-1 [95.8 kB] Get:1857 http://deb.debian.org/debian trixie/main amd64 r-cran-tikzdevice amd64 0.12.6-1 [1070 kB] Get:1858 http://deb.debian.org/debian trixie/main amd64 r-cran-tinytest all 1.4.1-1 [677 kB] Get:1859 http://deb.debian.org/debian trixie/main amd64 r-cran-truncdist all 1.0-2-4 [34.4 kB] Get:1860 http://deb.debian.org/debian trixie/main amd64 r-cran-tufte all 0.13-1 [203 kB] Get:1861 http://deb.debian.org/debian trixie/main amd64 r-cran-unitizer all 1.4.20-1 [1426 kB] Get:1862 http://deb.debian.org/debian trixie/main amd64 r-cran-uroot all 2.1-3-1 [1930 kB] Get:1863 http://deb.debian.org/debian trixie/main amd64 r-cran-v8 amd64 4.4.2+dfsg-1+b1 [103 kB] Get:1864 http://deb.debian.org/debian trixie/main amd64 r-cran-vcd all 1:1.4-12-1 [1272 kB] Get:1865 http://deb.debian.org/debian trixie/main amd64 r-cran-vdiffr amd64 1.0.7-1+b1 [139 kB] Get:1866 http://deb.debian.org/debian trixie/main amd64 r-cran-venndiagram all 1.7.3-1 [266 kB] Get:1867 http://deb.debian.org/debian trixie/main amd64 r-cran-vioplot all 0.5.0-1 [706 kB] Get:1868 http://deb.debian.org/debian trixie/main amd64 r-cran-webfakes amd64 1.3.0-1 [462 kB] Get:1869 http://deb.debian.org/debian trixie/main amd64 r-cran-webshot all 0.5.5-1 [189 kB] Get:1870 http://deb.debian.org/debian trixie/main amd64 r-cran-whoami all 1.3.0-2 [32.2 kB] Get:1871 http://deb.debian.org/debian trixie/main amd64 r-cran-zeallot all 0.1.0-3 [59.9 kB] Get:1872 http://deb.debian.org/debian trixie/main amd64 r-doc-html all 4.4.1-3 [581 kB] Get:1873 http://deb.debian.org/debian trixie/main amd64 r-other-mott-happy.hbrem amd64 2.4-5 [216 kB] Get:1874 http://deb.debian.org/debian trixie/main amd64 r-recommended all 4.4.1-3 [2580 B] Get:1875 http://deb.debian.org/debian trixie/main amd64 raster3d amd64 3.0-7-2+b1 [1288 kB] Get:1876 http://deb.debian.org/debian trixie/main amd64 raxml amd64 8.2.13+dfsg-1+b1 [1499 kB] Get:1877 http://deb.debian.org/debian trixie/main amd64 readseq amd64 1-15 [54.8 kB] Get:1878 http://deb.debian.org/debian trixie/main amd64 rnahybrid amd64 2.1.2-8 [161 kB] Get:1879 http://deb.debian.org/debian trixie/main amd64 rtax all 0.984-8 [26.7 kB] Get:1880 http://deb.debian.org/debian trixie/main amd64 samtools amd64 1.20-3 [653 kB] Get:1881 http://deb.debian.org/debian trixie/main amd64 sibsim4 amd64 0.20-5 [30.4 kB] Get:1882 http://deb.debian.org/debian trixie/main amd64 sigma-align amd64 1.1.3-9 [23.6 kB] Get:1883 http://deb.debian.org/debian trixie/main amd64 sim4 amd64 0.0.20121010-8 [359 kB] Get:1884 http://deb.debian.org/debian trixie/main amd64 smalt amd64 0.7.6-13 [115 kB] Get:1885 http://deb.debian.org/debian trixie/main amd64 snap amd64 2013-11-29-11 [380 kB] Get:1886 http://deb.debian.org/debian trixie/main amd64 soapdenovo amd64 1.05-6 [938 kB] Get:1887 http://deb.debian.org/debian trixie/main amd64 soapdenovo2 amd64 242+dfsg-4 [927 kB] Get:1888 http://deb.debian.org/debian trixie/main amd64 squizz amd64 0.99d+dfsg-3 [31.9 kB] Get:1889 http://deb.debian.org/debian trixie/main amd64 sra-toolkit amd64 3.0.3+dfsg-9 [6836 kB] Get:1890 http://deb.debian.org/debian trixie/main amd64 ssake all 4.0.1-2 [48.8 kB] Get:1891 http://deb.debian.org/debian trixie/main amd64 staden-io-lib-utils amd64 1.15.0-1.1+b1 [169 kB] Get:1892 http://deb.debian.org/debian trixie/main amd64 systemd-cryptsetup amd64 256.6-1 [163 kB] Get:1893 http://deb.debian.org/debian trixie/main amd64 t-coffee amd64 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 [1032 kB] Get:1894 http://deb.debian.org/debian trixie/main amd64 tabix amd64 1.20+ds-1 [483 kB] Get:1895 http://deb.debian.org/debian trixie/main amd64 theseus amd64 3.3.0-14+b1 [386 kB] Get:1896 http://deb.debian.org/debian trixie/main amd64 tigr-glimmer amd64 3.02b-6+b1 [283 kB] Get:1897 http://deb.debian.org/debian trixie/main amd64 tm-align amd64 20190822+dfsg-3 [867 kB] Get:1898 http://deb.debian.org/debian trixie/main amd64 tree-puzzle amd64 5.3~rc16+dfsg-10 [170 kB] Get:1899 http://deb.debian.org/debian trixie/main amd64 tree-puzzle-doc all 5.3~rc16+dfsg-10 [431 kB] Get:1900 http://deb.debian.org/debian trixie/main amd64 va-driver-all amd64 2.22.0-1 [14.8 kB] Get:1901 http://deb.debian.org/debian trixie/main amd64 vcftools amd64 0.1.16-3+b1 [431 kB] Get:1902 http://deb.debian.org/debian trixie/main amd64 vdpau-driver-all amd64 1.5-3 [4436 B] Get:1903 http://deb.debian.org/debian trixie/main amd64 velvet amd64 1.2.10+dfsg1-9 [678 kB] Get:1904 http://deb.debian.org/debian trixie/main amd64 wise-data all 2.4.1-25 [76.1 kB] Get:1905 http://deb.debian.org/debian trixie/main amd64 wise amd64 2.4.1-25 [1037 kB] Get:1906 http://deb.debian.org/debian trixie/main amd64 x11-xserver-utils amd64 7.7+10+b1 [163 kB] Get:1907 http://deb.debian.org/debian trixie/main amd64 xdg-user-dirs amd64 0.18-1 [54.4 kB] Get:1908 http://deb.debian.org/debian trixie/main amd64 libegl1 amd64 1.7.0-1+b1 [34.3 kB] Get:1909 http://deb.debian.org/debian trixie/main amd64 zutty amd64 0.16.1.20240818+dfsg1-1 [180 kB] Get:1910 http://deb.debian.org/debian trixie/main amd64 gnupg-utils amd64 2.2.43-8+b1 [504 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2090 MB in 1min 18s (26.8 MB/s) Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5145 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b1_amd64.deb ... Unpacking libapparmor1:amd64 (3.1.7-1+b1) ... Selecting previously unselected package libsystemd-shared:amd64. Preparing to unpack .../libsystemd-shared_256.6-1_amd64.deb ... Unpacking libsystemd-shared:amd64 (256.6-1) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_256.6-1_amd64.deb ... Unpacking systemd (256.6-1) ... Setting up libapparmor1:amd64 (3.1.7-1+b1) ... Setting up libsystemd-shared:amd64 (256.6-1) ... Setting up systemd (256.6-1) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' → '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' → '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' → '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. [ESC][0;1;39m/usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring.[ESC][0m [ESC][0;1;31m"/home" already exists and is not a directory.[ESC][0m Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6108 files and directories currently installed.) Preparing to unpack .../0-systemd-sysv_256.6-1_amd64.deb ... Unpacking systemd-sysv (256.6-1) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../1-libdbus-1-3_1.14.10-4+b1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.14.10-4+b1) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../2-dbus-bin_1.14.10-4+b1_amd64.deb ... Unpacking dbus-bin (1.14.10-4+b1) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../3-dbus-session-bus-common_1.14.10-4_all.deb ... Unpacking dbus-session-bus-common (1.14.10-4) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../4-libexpat1_2.6.3-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-1) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../5-dbus-daemon_1.14.10-4+b1_amd64.deb ... Unpacking dbus-daemon (1.14.10-4+b1) ... Selecting previously unselected package adduser. Preparing to unpack .../6-adduser_3.137_all.deb ... Unpacking adduser (3.137) ... Setting up adduser (3.137) ... Selecting previously unselected package dbus-system-bus-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6254 files and directories currently installed.) Preparing to unpack .../00-dbus-system-bus-common_1.14.10-4_all.deb ... Unpacking dbus-system-bus-common (1.14.10-4) ... Selecting previously unselected package dbus. Preparing to unpack .../01-dbus_1.14.10-4+b1_amd64.deb ... Unpacking dbus (1.14.10-4+b1) ... Selecting previously unselected package perl-modules-5.38. Preparing to unpack .../02-perl-modules-5.38_5.38.2-5_all.deb ... Unpacking perl-modules-5.38 (5.38.2-5) ... Selecting previously unselected package libgdbm6t64:amd64. Preparing to unpack .../03-libgdbm6t64_1.24-2_amd64.deb ... Unpacking libgdbm6t64:amd64 (1.24-2) ... Selecting previously unselected package libgdbm-compat4t64:amd64. Preparing to unpack .../04-libgdbm-compat4t64_1.24-2_amd64.deb ... Unpacking libgdbm-compat4t64:amd64 (1.24-2) ... Selecting previously unselected package libperl5.38t64:amd64. Preparing to unpack .../05-libperl5.38t64_5.38.2-5_amd64.deb ... Unpacking libperl5.38t64:amd64 (5.38.2-5) ... Selecting previously unselected package perl. Preparing to unpack .../06-perl_5.38.2-5_amd64.deb ... Unpacking perl (5.38.2-5) ... Selecting previously unselected package fonts-droid-fallback. Preparing to unpack .../07-fonts-droid-fallback_1%3a6.0.1r16-1.1_all.deb ... Unpacking fonts-droid-fallback (1:6.0.1r16-1.1) ... Selecting previously unselected package fonts-lato. Preparing to unpack .../08-fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libmpfr6:amd64. Preparing to unpack .../09-libmpfr6_4.2.1-1+b1_amd64.deb ... Unpacking libmpfr6:amd64 (4.2.1-1+b1) ... Selecting previously unselected package readline-common. Preparing to unpack .../10-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../11-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../12-libsigsegv2_2.14-1+b1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.14-1+b1) ... Setting up libmpfr6:amd64 (4.2.1-1+b1) ... Setting up readline-common (8.2-5) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up libsigsegv2:amd64 (2.14-1+b1) ... Selecting previously unselected package gawk. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8398 files and directories currently installed.) Preparing to unpack .../00-gawk_1%3a5.2.1-2+b1_amd64.deb ... Unpacking gawk (1:5.2.1-2+b1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../01-liblocale-gettext-perl_1.07-7_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package libgomp1:amd64. Preparing to unpack .../02-libgomp1_14.2.0-3_amd64.deb ... Unpacking libgomp1:amd64 (14.2.0-3) ... Selecting previously unselected package libfftw3-double3:amd64. Preparing to unpack .../03-libfftw3-double3_3.3.10-1+b3_amd64.deb ... Unpacking libfftw3-double3:amd64 (3.3.10-1+b3) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../04-libbrotli1_1.1.0-2+b4_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b4) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../05-libpng16-16t64_1.6.44-1_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.44-1) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../06-libfreetype6_2.13.3+dfsg-1_amd64.deb ... Unpacking libfreetype6:amd64 (2.13.3+dfsg-1) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../07-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../08-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fonts-liberation. Preparing to unpack .../09-fonts-liberation_1%3a2.1.5-3_all.deb ... Unpacking fonts-liberation (1:2.1.5-3) ... Selecting previously unselected package libfontenc1:amd64. Preparing to unpack .../10-libfontenc1_1%3a1.1.8-1_amd64.deb ... Unpacking libfontenc1:amd64 (1:1.1.8-1) ... Selecting previously unselected package x11-common. Preparing to unpack .../11-x11-common_1%3a7.7+23.1_all.deb ... Unpacking x11-common (1:7.7+23.1) ... Selecting previously unselected package xfonts-encodings. Preparing to unpack .../12-xfonts-encodings_1%3a1.0.4-2.2_all.deb ... Unpacking xfonts-encodings (1:1.0.4-2.2) ... Selecting previously unselected package xfonts-utils. Preparing to unpack .../13-xfonts-utils_1%3a7.7+7_amd64.deb ... Unpacking xfonts-utils (1:7.7+7) ... Selecting previously unselected package fonts-urw-base35. Preparing to unpack .../14-fonts-urw-base35_20200910-8_all.deb ... Unpacking fonts-urw-base35 (20200910-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../15-fontconfig-config_2.15.0-1.1_amd64.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../16-libfontconfig1_2.15.0-1.1_amd64.deb ... Unpacking libfontconfig1:amd64 (2.15.0-1.1) ... Selecting previously unselected package libsharpyuv0:amd64. Preparing to unpack .../17-libsharpyuv0_1.4.0-0.1_amd64.deb ... Unpacking libsharpyuv0:amd64 (1.4.0-0.1) ... Selecting previously unselected package libdav1d7:amd64. Preparing to unpack .../18-libdav1d7_1.4.3-1_amd64.deb ... Unpacking libdav1d7:amd64 (1.4.3-1) ... Selecting previously unselected package libheif-plugin-dav1d:amd64. Preparing to unpack .../19-libheif-plugin-dav1d_1.18.1-2_amd64.deb ... Unpacking libheif-plugin-dav1d:amd64 (1.18.1-2) ... Selecting previously unselected package libde265-0:amd64. Preparing to unpack .../20-libde265-0_1.0.15-1+b2_amd64.deb ... Unpacking libde265-0:amd64 (1.0.15-1+b2) ... Selecting previously unselected package libheif-plugin-libde265:amd64. Preparing to unpack .../21-libheif-plugin-libde265_1.18.1-2_amd64.deb ... Unpacking libheif-plugin-libde265:amd64 (1.18.1-2) ... Selecting previously unselected package libheif1:amd64. Preparing to unpack .../22-libheif1_1.18.1-2_amd64.deb ... Unpacking libheif1:amd64 (1.18.1-2) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../23-libjbig0_2.1-6.1+b1_amd64.deb ... Unpacking libjbig0:amd64 (2.1-6.1+b1) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../24-libjpeg62-turbo_1%3a2.1.5-3_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-3) ... Selecting previously unselected package liblcms2-2:amd64. Preparing to unpack .../25-liblcms2-2_2.14-2+b1_amd64.deb ... 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Unpacking libtre5:amd64 (0.8.0-8) ... Selecting previously unselected package lua-filesystem:amd64. Preparing to unpack .../0576-lua-filesystem_1.8.0-3+b1_amd64.deb ... Unpacking lua-filesystem:amd64 (1.8.0-3+b1) ... Selecting previously unselected package lua-lpeg:amd64. Preparing to unpack .../0577-lua-lpeg_1.0.2-2+b1_amd64.deb ... Unpacking lua-lpeg:amd64 (1.0.2-2+b1) ... Selecting previously unselected package lua-md5:amd64. Preparing to unpack .../0578-lua-md5_1.2+git+1+8d87fee-2+b1_amd64.deb ... Unpacking lua-md5:amd64 (1.2+git+1+8d87fee-2+b1) ... Selecting previously unselected package genometools-common. Preparing to unpack .../0579-genometools-common_1.6.5+ds-2.2_all.deb ... Unpacking genometools-common (1.6.5+ds-2.2) ... Selecting previously unselected package genometools. Preparing to unpack .../0580-genometools_1.6.5+ds-2.2_amd64.deb ... Unpacking genometools (1.6.5+ds-2.2) ... Selecting previously unselected package gff2aplot. 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Unpacking r-cran-fontbitstreamvera (0.1.1+dfsg-4) ... Selecting previously unselected package r-cran-fontliberation. Preparing to unpack .../1522-r-cran-fontliberation_0.1.0+dfsg-5_all.deb ... Unpacking r-cran-fontliberation (0.1.0+dfsg-5) ... Selecting previously unselected package r-cran-fontquiver. Preparing to unpack .../1523-r-cran-fontquiver_0.2.1-4_all.deb ... Unpacking r-cran-fontquiver (0.2.1-4) ... Selecting previously unselected package r-cran-fracdiff. Preparing to unpack .../1524-r-cran-fracdiff_1.5-3-1_amd64.deb ... Unpacking r-cran-fracdiff (1.5-3-1) ... Selecting previously unselected package r-cran-quadprog. Preparing to unpack .../1525-r-cran-quadprog_1.5-8-1+b1_amd64.deb ... Unpacking r-cran-quadprog (1.5-8-1+b1) ... Selecting previously unselected package r-cran-ttr. Preparing to unpack .../1526-r-cran-ttr_0.24.4-1_amd64.deb ... Unpacking r-cran-ttr (0.24.4-1) ... Selecting previously unselected package r-cran-quantmod. 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Unpacking r-cran-gdata (3.0.0-1) ... Selecting previously unselected package r-cran-gee. Preparing to unpack .../1546-r-cran-gee_4.13-27-1_amd64.deb ... Unpacking r-cran-gee (4.13-27-1) ... Selecting previously unselected package r-cran-geepack. Preparing to unpack .../1547-r-cran-geepack_1.3.11.1-1_amd64.deb ... Unpacking r-cran-geepack (1.3.11.1-1) ... Selecting previously unselected package r-cran-sp. Preparing to unpack .../1548-r-cran-sp_1%3a2.1-2+dfsg-1_amd64.deb ... Unpacking r-cran-sp (1:2.1-2+dfsg-1) ... Selecting previously unselected package r-cran-geosphere. Preparing to unpack .../1549-r-cran-geosphere_1.5-18-1_amd64.deb ... Unpacking r-cran-geosphere (1.5-18-1) ... Selecting previously unselected package r-cran-patchwork. Preparing to unpack .../1550-r-cran-patchwork_1.2.0-1_all.deb ... Unpacking r-cran-patchwork (1.2.0-1) ... Selecting previously unselected package r-cran-ggstats. Preparing to unpack .../1551-r-cran-ggstats_0.5.1-2_all.deb ... 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Unpacking r-cran-ggsignif (0.6.4-1) ... Selecting previously unselected package r-cran-polynom. Preparing to unpack .../1564-r-cran-polynom_1.4-1+dfsg-1_all.deb ... Unpacking r-cran-polynom (1.4-1+dfsg-1) ... Selecting previously unselected package r-cran-rstatix. Preparing to unpack .../1565-r-cran-rstatix_0.7.2-1_all.deb ... Unpacking r-cran-rstatix (0.7.2-1) ... Selecting previously unselected package r-cran-ggpubr. Preparing to unpack .../1566-r-cran-ggpubr_0.6.0-1_all.deb ... Unpacking r-cran-ggpubr (0.6.0-1) ... Selecting previously unselected package r-cran-git2r. Preparing to unpack .../1567-r-cran-git2r_0.33.0+dfsg-1_amd64.deb ... Unpacking r-cran-git2r (0.33.0+dfsg-1) ... Selecting previously unselected package r-cran-glmnet. Preparing to unpack .../1568-r-cran-glmnet_4.1-8-1_amd64.deb ... Unpacking r-cran-glmnet (4.1-8-1) ... Selecting previously unselected package r-cran-gmm. Preparing to unpack .../1569-r-cran-gmm_1.8-1_amd64.deb ... Unpacking r-cran-gmm (1.8-1) ... Selecting previously unselected package r-cran-gmp. Preparing to unpack .../1570-r-cran-gmp_0.7-4-1_amd64.deb ... Unpacking r-cran-gmp (0.7-4-1) ... Selecting previously unselected package r-cran-uuid. Preparing to unpack .../1571-r-cran-uuid_1.2-1-1_amd64.deb ... Unpacking r-cran-uuid (1.2-1-1) ... Selecting previously unselected package r-cran-googledrive. Preparing to unpack .../1572-r-cran-googledrive_2.1.1-1_all.deb ... Unpacking r-cran-googledrive (2.1.1-1) ... Selecting previously unselected package r-cran-ids. Preparing to unpack .../1573-r-cran-ids_1.0.1-2_all.deb ... Unpacking r-cran-ids (1.0.1-2) ... Selecting previously unselected package r-cran-googlesheets4. Preparing to unpack .../1574-r-cran-googlesheets4_1.1.1-1_all.deb ... Unpacking r-cran-googlesheets4 (1.1.1-1) ... Selecting previously unselected package r-cran-gparotation. Preparing to unpack .../1575-r-cran-gparotation_2024.2-1-1_all.deb ... Unpacking r-cran-gparotation (2024.2-1-1) ... Selecting previously unselected package r-cran-gplots. Preparing to unpack .../1576-r-cran-gplots_3.1.3.1-1_all.deb ... Unpacking r-cran-gplots (3.1.3.1-1) ... Selecting previously unselected package r-cran-gridbase. Preparing to unpack .../1577-r-cran-gridbase_0.4-7-5_all.deb ... Unpacking r-cran-gridbase (0.4-7-5) ... Selecting previously unselected package r-cran-gridgraphics. Preparing to unpack .../1578-r-cran-gridgraphics_0.5-1-1_all.deb ... Unpacking r-cran-gridgraphics (0.5-1-1) ... Selecting previously unselected package r-cran-xml. Preparing to unpack .../1579-r-cran-xml_3.99-0.17-1_amd64.deb ... Unpacking r-cran-xml (3.99-0.17-1) ... Selecting previously unselected package r-cran-gridsvg. Preparing to unpack .../1580-r-cran-gridsvg_1.7-5-1_all.deb ... Unpacking r-cran-gridsvg (1.7-5-1) ... Selecting previously unselected package r-cran-here. Preparing to unpack .../1581-r-cran-here_1.0.1-2_all.deb ... Unpacking r-cran-here (1.0.1-2) ... 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Selecting previously unselected package r-cran-mlr. Preparing to unpack .../1648-r-cran-mlr_2.19.1+dfsg-1_amd64.deb ... Unpacking r-cran-mlr (2.19.1+dfsg-1) ... Selecting previously unselected package r-cran-mockery. Preparing to unpack .../1649-r-cran-mockery_0.4.4+dfsg-1_all.deb ... Unpacking r-cran-mockery (0.4.4+dfsg-1) ... Selecting previously unselected package r-cran-modeldata. Preparing to unpack .../1650-r-cran-modeldata_1.4.0-1_all.deb ... Unpacking r-cran-modeldata (1.4.0-1) ... Selecting previously unselected package r-cran-msm. Preparing to unpack .../1651-r-cran-msm_1.7.1-1_amd64.deb ... Unpacking r-cran-msm (1.7.1-1) ... Selecting previously unselected package r-cran-multcompview. Preparing to unpack .../1652-r-cran-multcompview_0.1-9-1_all.deb ... Unpacking r-cran-multcompview (0.1-9-1) ... Selecting previously unselected package r-cran-ncdf4. Preparing to unpack .../1653-r-cran-ncdf4_1.22-1+b1_amd64.deb ... Unpacking r-cran-ncdf4 (1.22-1+b1) ... 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Unpacking r-cran-pec (2023.04.12-1) ... Selecting previously unselected package r-cran-pammtools. Preparing to unpack .../1666-r-cran-pammtools_0.5.92-1_all.deb ... Unpacking r-cran-pammtools (0.5.92-1) ... Selecting previously unselected package r-cran-pander. Preparing to unpack .../1667-r-cran-pander_0.6.5+dfsg-3+deb12u1_amd64.deb ... Unpacking r-cran-pander (0.6.5+dfsg-3+deb12u1) ... Selecting previously unselected package r-cran-strucchange. Preparing to unpack .../1668-r-cran-strucchange_1.5-4-1_amd64.deb ... Unpacking r-cran-strucchange (1.5-4-1) ... Selecting previously unselected package r-cran-party. Preparing to unpack .../1669-r-cran-party_1.3-17-1_amd64.deb ... Unpacking r-cran-party (1.3-17-1) ... Selecting previously unselected package r-cran-partykit. Preparing to unpack .../1670-r-cran-partykit_1.2-20-1_amd64.deb ... Unpacking r-cran-partykit (1.2-20-1) ... Selecting previously unselected package r-cran-patrick. 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Setting up libjs-lunr (2.3.9~dfsg-2) ... Setting up libxcb-glx0:amd64 (1.17.0-2) ... Setting up unzip (6.0-28) ... Setting up libgeos3.13.0:amd64 (3.13.0-1) ... Setting up libgs-common (10.04.0~dfsg-1) ... Setting up libbrotli1:amd64 (1.1.0-2+b4) ... Setting up autodock (4.2.6-9) ... ---------------------------------------------------------------------- ______ / \ / \ / \ \ /\ / \ / \ / \/ /\ \/ / \ /____\ AutoDock and AutoGrid are free software, distributed under the terms of the GNU General Public License 2 or later. This allows us to share the code and to be open for improvement from the whole scientific community. The development of the AutoDock suite is entirely funded by research grants. For that reason, we ask you to register at the AutoDock Registration page http://autodock.scripps.edu/downloads/autodock-registration in order to keep track of number of unique downloads, which we use to support the grant applications. Installing the Debian popularity-contest package is also encouraged. Thank you, and happy docking! The AutoDock Development Team If you plan to use AutoDock for commercial purposes we encourage donations to the Olson laboratory to help support further development of the AutoDock 4 suite of programs. Donation information provided on the download page. ---------------------------------------------------------------------- Setting up libedit2:amd64 (3.1-20240808-1) ... Setting up libsqlite3-0:amd64 (3.46.0-1) ... Setting up libsasl2-modules:amd64 (2.1.28+dfsg1-8) ... Setting up liblab-gamut1:amd64 (2.42.4-2) ... Setting up libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... Setting up libuv1t64:amd64 (1.48.0-6) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up phylip (1:3.697+dfsg-4) ... Setting up libmysofa1:amd64 (1.3.2+dfsg-2+b1) ... Setting up disulfinder (1.2.11-12) ... Setting up libxcb-shape0:amd64 (1.17.0-2) ... Setting up libfcgi-bin (2.4.2-2.1) ... 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Setting up libcifpp-data (5.0.7.1-3) ... Setting up libglapi-mesa:amd64 (24.2.2-1) ... Setting up libkpathsea6:amd64 (2024.20240313.70630+ds-4) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:amd64 (14.2.0-3) ... Setting up libraw23t64:amd64 (0.21.2-2.1) ... Setting up libvulkan1:amd64 (1.3.290.0-1) ... Setting up libgatbcore3:amd64 (1.4.2+dfsg-13+b1) ... Setting up libnghttp3-9:amd64 (1.4.0-1) ... Setting up nodejs-doc (20.17.0+dfsg-2) ... Setting up libwebp7:amd64 (1.4.0-0.1) ... Setting up ruby-webrick (1.8.1-1) ... Setting up liblzma-dev:amd64 (5.6.2-2) ... Setting up libubsan1:amd64 (14.2.0-3) ... Setting up libxcb-dri2-0:amd64 (1.17.0-2) ... Setting up libgif7:amd64 (5.2.2-1) ... Setting up libodbc2:amd64 (2.3.12-1+b2) ... Setting up liburiparser1:amd64 (0.9.8+dfsg-1) ... Setting up libbdplus0:amd64 (0.2.0-4) ... Setting up fonts-dejavu-extra (2.37-8) ... Setting up libnuma1:amd64 (2.0.18-1) ... Setting up node-undici (5.28.4+dfsg1+~cs23.12.11-2) ... Setting up libpcre2-posix3:amd64 (10.42-4+b1) ... Setting up plink (1.07+dfsg-4+b1) ... Setting up libvidstab1.1:amd64 (1.1.0-2+b1) ... Setting up libfyba0t64:amd64 (4.1.1-11) ... Setting up libvpx9:amd64 (1.14.1-1) ... Setting up libsrt1.5-gnutls:amd64 (1.5.3-1+b2) ... Setting up alsa-topology-conf (1.2.5.1-3) ... Setting up loki (2.4.7.4-10) ... Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... Setting up libflite1:amd64 (2.2-6+b2) ... Setting up ncbi-tools-bin (6.1.20170106+dfsg2-4) ... Setting up libdav1d7:amd64 (1.4.3-1) ... Setting up libfreemarker-java (2.3.32-2) ... Setting up datamash (1.8-1) ... Setting up sensible-utils (0.0.24) ... Setting up libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Setting up libasyncns0:amd64 (0.8-6+b4) ... Setting up libxshmfence1:amd64 (1.3-1+b1) ... Setting up libhwasan0:amd64 (14.2.0-3) ... Setting up paml (4.9j+dfsg-5) ... Setting up at-spi2-common (2.54.0-1) ... Setting up python-biopython-doc (1.83+dfsg1-5) ... Setting up libcrypt-dev:amd64 (1:4.4.36-5) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up libbs2b0:amd64 (3.1.0+dfsg-8) ... Setting up bamtools (2.5.2+dfsg-6) ... Setting up dialign-tx (1.0.2-15) ... Setting up libxcb-randr0:amd64 (1.17.0-2) ... Setting up dbus-session-bus-common (1.14.10-4) ... Setting up librav1e0.7:amd64 (0.7.1-7+b1) ... Setting up libasan8:amd64 (14.2.0-3) ... Setting up pal2nal (14.1-3) ... Setting up libassuan9:amd64 (3.0.1-2) ... Setting up procps (2:4.0.4-5) ... Setting up libapr1t64:amd64 (1.7.5-1) ... Setting up mira-rfam-12s-rrna (4.9.6-11) ... Will install rfam_rrna-21-12 with kmer size 21 as MIRA default rRNA filter in /usr/bin/../share/mira/mhs Installing. This can take a minute or two, please be patient. Done. MIRA can now use the functionality to filter for rRNA during assemblies. MIRABAIT can now use the '-j rrna' option. Setting up sse4.2-support (24) ... Setting up liblua5.1-0:amd64 (5.1.5-9+b2) ... Setting up libblosc1:amd64 (1.21.5+ds-1+b1) ... Setting up fonts-liberation (1:2.1.5-3) ... Setting up libnl-3-200:amd64 (3.7.0-0.3) ... Setting up gpgconf (2.2.43-8+b1) ... Setting up libpsm2-2 (11.2.185-2.1) ... Setting up soapdenovo2 (242+dfsg-4) ... Setting up openmpi-common (4.1.6-13.3) ... Setting up clustalw (2.1+lgpl-7) ... Setting up libc6-i386 (2.40-2) ... Setting up libzimg2:amd64 (3.0.5+ds1-1+b1) ... Setting up fonts-lmodern (2.005-1) ... Setting up libsuitesparseconfig7:amd64 (1:7.8.2+dfsg-2) ... Setting up liblua5.4-0:amd64 (5.4.6-3+b1) ... Setting up libopenjp2-7:amd64 (2.5.0-2+b3) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up autogrid (4.2.6-9) ... Setting up ncbi-vdb-data (3.0.2+dfsg-2) ... Setting up libthai-data (0.1.29-2) ... Setting up fasttree (2.1.11-2) ... Setting up netbase (6.4) ... Setting up node-bootstrap-sass (3.4.3-2) ... Setting up libabsl20230802:amd64 (20230802.1-4) ... Setting up libngtcp2-16:amd64 (1.6.0-1) ... Setting up libcommons-math3-java (3.6.1-3) ... Setting up sgml-base (1.31) ... Setting up libjs-prettify (2015.12.04+dfsg-1.1) ... Setting up libcdt5:amd64 (2.42.4-2) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libcgraph6:amd64 (2.42.4-2) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-10) ... Setting up libglu1-mesa:amd64 (9.0.2-1.1+b1) ... Setting up libunibreak6:amd64 (6.1-2) ... Setting up libflac12t64:amd64 (1.4.3+ds-2.1) ... Setting up fonts-droid-fallback (1:6.0.1r16-1.1) ... Setting up libwayland-egl1:amd64 (1.23.0-1) ... Setting up libjs-bootstrap4 (4.6.1+dfsg1-4) ... Setting up node-minimatch (9.0.3-5) ... Setting up libperl5.38t64:amd64 (5.38.2-5) ... Setting up libxkbfile1:amd64 (1:1.1.0-1+b1) ... Setting up squizz (0.99d+dfsg-3) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libdjvulibre-text (3.5.28-2) ... Setting up libssh2-1t64:amd64 (1.11.0-7) ... Setting up libhttpcore-java (4.4.16-1) ... Setting up lynx (2.9.2-1) ... update-alternatives: using /usr/bin/lynx to provide /usr/bin/www-browser (www-browser) in auto mode Setting up pandoc-data (3.1.3-3) ... Setting up libmuparser2v5:amd64 (2.3.4-1) ... Setting up libtsan2:amd64 (14.2.0-3) ... Setting up libjoptsimple-java (5.0.4-4) ... Setting up fonts-circos-symbols (0.69.9+dfsg-2) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up dmidecode (3.6-1) ... Setting up libhunspell-1.7-0:amd64 (1.7.2+really1.7.2-10+b2) ... Setting up fonts-liberation-sans-narrow (1:1.07.6-4) ... Setting up libbinutils:amd64 (2.43.1-3) ... Setting up dbus-system-bus-common (1.14.10-4) ... Setting up menu (2.1.50) ... Setting up node-xtend (4.0.2-3) ... Setting up libfido2-1:amd64 (1.15.0-1) ... Setting up libisl23:amd64 (0.27-1) ... Setting up libgsl28:amd64 (2.8+dfsg-3) ... Setting up libde265-0:amd64 (1.0.15-1+b2) ... Setting up libc-dev-bin (2.40-2) ... Setting up libkmlbase1t64:amd64 (1.3.0-12) ... Setting up libdivsufsort3:amd64 (2.0.1-6) ... Setting up libsamplerate0:amd64 (0.2.2-4+b1) ... Setting up python-matplotlib-data (3.8.3-3) ... Setting up openssl (3.3.2-1) ... Setting up libwebpmux3:amd64 (1.4.0-0.1) ... Setting up velvet (1.2.10+dfsg1-9) ... Setting up libdeflate-dev:amd64 (1.21-1) ... Setting up node-normalize.css (8.0.1-5) ... Setting up tabix (1.20+ds-1) ... Setting up tigr-glimmer (3.02b-6+b1) ... Setting up libdrm-common (2.4.123-1) ... Setting up libyuv0:amd64 (0.0.1888.20240710-3) ... Setting up libsnappy-jni (1.1.10.5-2) ... Setting up libxcomposite1:amd64 (1:0.4.5-1+b1) ... Setting up dialign (2.2.1-13) ... Setting up libjson-c5:amd64 (0.18+ds-1) ... Setting up ruby-xmlrpc (0.3.3-2) ... Setting up publicsuffix (20231001.0357-0.1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Setting up fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libsquid1t64:amd64 (1.9g+cvs20050121-15.1) ... Setting up bedtools (2.31.1+dfsg-2) ... Setting up libcc1-0:amd64 (14.2.0-3) ... Setting up libxmuu1:amd64 (2:1.1.3-3+b2) ... Setting up dbus-bin (1.14.10-4+b1) ... Setting up liblocale-gettext-perl (1.07-7) ... Setting up gpg (2.2.43-8+b1) ... Setting up libzvbi-common (0.2.42-2) ... Setting up liblsan0:amd64 (14.2.0-3) ... Setting up libsprng2 (2.0a-16) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ... Setting up libmp3lame0:amd64 (3.100-6+b2) ... Setting up libblas-dev:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so to provide /usr/lib/x86_64-linux-gnu/libblas.so (libblas.so-x86_64-linux-gnu) in auto mode Setting up node-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libsz2:amd64 (1.1.3-1) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libitm1:amd64 (14.2.0-3) ... Setting up libhttp-parser2.9:amd64 (2.9.4-6+b1) ... Setting up libvorbisenc2:amd64 (1.3.7-2) ... Setting up libsynctex2:amd64 (2024.20240313.70630+ds-4) ... Setting up libkmod2:amd64 (33+20240816-2) ... Setting up prank (0.0.170427+dfsg-3) ... Setting up libargtable2-0 (13-2) ... Setting up libdvdnav4:amd64 (6.1.1-3) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up maq (0.7.1-10) ... Setting up laptop-detect (0.16) ... Setting up libllvm18:amd64 (1:18.1.8-11) ... Setting up gnupg-utils (2.2.43-8+b1) ... Setting up raxml (8.2.13+dfsg-1+b1) ... Setting up libgflags2.2 (2.2.2-2) ... Setting up gdal-plugins:amd64 (3.9.2+dfsg-1+b1) ... Setting up libgclib3:amd64 (0.12.7+ds-5+b1) ... Setting up libserd-0-0:amd64 (0.32.2-1) ... Setting up clearcut (1.0.9+git20211013.b799afe-1) ... Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Setting up libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... Setting up libxkbcommon0:amd64 (1.6.0-1+b1) ... Setting up libpotrace0:amd64 (1.16-2+b1) ... Setting up ncbi-epcr (2.3.12-1-10) ... Setting up libwayland-client0:amd64 (1.23.0-1) ... Setting up libctf0:amd64 (2.43.1-3) ... Setting up pinentry-curses (1.2.1-4+b1) ... Setting up libxcb-dri3-0:amd64 (1.17.0-2) ... Setting up libcommons-dbcp-java (1.4-8) ... Setting up smalt (0.7.6-13) ... Setting up libaprutil1t64:amd64 (1.6.3-3) ... Setting up manpages-dev (6.8-2) ... Setting up libx11-xcb1:amd64 (2:1.8.7-1+b1) ... Setting up libice6:amd64 (2:1.0.10-1+b1) ... Setting up libre2-11:amd64 (20240501-3) ... Setting up gromacs-data (2024.2-1) ... Setting up libodbcinst2:amd64 (2.3.12-1+b2) ... Setting up tree-puzzle (5.3~rc16+dfsg-10) ... Setting up libhpdf-2.3.0:amd64 (2.3.0+dfsg-1+b2) ... Setting up tcl8.6 (8.6.14+dfsg-1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gff2ps (0.98l-6) ... Setting up libmbedx509-1t64:amd64 (2.28.8-1) ... Setting up libclc-18 (1:18.1.8-11) ... Setting up libarpack2t64:amd64 (3.9.1-1.1+b2) ... Setting up libxdamage1:amd64 (1:1.1.6-1+b1) ... Setting up libopenblas0-pthread:amd64 (0.3.28+ds-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/x86_64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-x86_64-linux-gnu) in auto mode Setting up gpg-agent (2.2.43-8+b1) ... Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-browser.socket' → '/usr/lib/systemd/user/gpg-agent-browser.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-extra.socket' → '/usr/lib/systemd/user/gpg-agent-extra.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent-ssh.socket' → '/usr/lib/systemd/user/gpg-agent-ssh.socket'. Created symlink '/etc/systemd/user/sockets.target.wants/gpg-agent.socket' → '/usr/lib/systemd/user/gpg-agent.socket'. Setting up java-wrappers (0.5) ... Setting up libamd3:amd64 (1:7.8.2+dfsg-2) ... Setting up libjxr-tools (1.2~git20170615.f752187-5.3) ... Setting up libxpm4:amd64 (1:3.5.17-1+b1) ... Setting up libzvbi0t64:amd64 (0.2.42-2) ... Setting up libjgrapht0.8-java (0.8.3-6) ... Setting up libwoff1:amd64 (1.0.2-2+b1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up dictionaries-common (1.29.7) ... Setting up libpng-tools (1.6.44-1) ... Setting up alsa-ucm-conf (1.2.12-1) ... Setting up libcolamd3:amd64 (1:7.8.2+dfsg-2) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up aevol (5.0+ds-3+b2) ... Setting up libgeos-c1t64:amd64 (3.13.0-1) ... Setting up glam2 (1064-9) ... Setting up libwebpdemux2:amd64 (1.4.0-0.1) ... Setting up gpgsm (2.2.43-8+b1) ... Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Setting up libcommons-parent-java (56-1) ... Setting up libdjvulibre21:amd64 (3.5.28-2+b1) ... Setting up libavahi-common3:amd64 (0.8-13+b2) ... Setting up libcommons-logging-java (1.3.0-1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libqpdf29t64:amd64 (11.9.1-1) ... Setting up clonalframe (1.2-11+b3) ... Setting up libnss3:amd64 (2:3.103-1) ... Setting up dbus-daemon (1.14.10-4+b1) ... Setting up clustalo (1.2.4-8) ... Setting up libsuperlu6:amd64 (6.0.1+dfsg1-1+b1) ... Setting up tm-align (20190822+dfsg-3) ... Setting up biosquid (1.9g+cvs20050121-15.1) ... Setting up libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3) ... Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... Setting up pkgconf:amd64 (1.8.1-3) ... Setting up libxxf86vm1:amd64 (1:1.1.4-1+b2) ... Setting up libtbbbind-2-5:amd64 (2021.12.0-1) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3) ... Setting up libxnvctrl0:amd64 (535.171.04-1) ... Setting up libcifpp5:amd64 (5.0.7.1-3+b1) ... Setting up libkmldom1t64:amd64 (1.3.0-12) ... Setting up libcommons-jexl2-java (2.1.1-6) ... Setting up cdbfasta (1.00+git20230710.da8f5ba+dfsg-1) ... Setting up dirmngr (2.2.43-8+b1) ... Created symlink '/etc/systemd/user/sockets.target.wants/dirmngr.socket' → '/usr/lib/systemd/user/dirmngr.socket'. Setting up libthai0:amd64 (0.1.29-2) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libvorbisfile3:amd64 (1.3.7-2) ... Setting up perl (5.38.2-5) ... Setting up libpackage-stash-xs-perl:amd64 (0.30-1+b3) ... Setting up libglib2.0-0t64:amd64 (2.82.1-1) ... Setting up libgprofng0:amd64 (2.43.1-3) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libset-object-perl (1.42-1+b4) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libptexenc1:amd64 (2024.20240313.70630+ds-4) ... Setting up libllvm17t64:amd64 (1:17.0.6-18) ... Setting up pandoc (3.1.3+ds-3+b1) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libdata-dump-perl (1.25-1) ... Setting up libglpk40:amd64 (5.0-1+b1) ... Setting up lib32gcc-s1 (14.2.0-3) ... Setting up lib32stdc++6 (14.2.0-3) ... Setting up libref-util-perl (0.204-2) ... Setting up libxfixes3:amd64 (1:6.0.0-2+b1) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libxml-xpathengine-perl (0.14-2) ... Setting up libxml-writer-perl (0.900-2) ... Setting up dbus (1.14.10-4+b1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libio-compress-brotli-perl (0.004001-2+b2) ... Setting up libopenexr-3-1-30:amd64 (3.1.5-5.1+b2) ... Setting up shared-mime-info (2.4-5) ... Warning: program compiled against libxml 212 using older 209 Setting up libxinerama1:amd64 (2:1.1.4-3+b1) ... Setting up libdata-dumper-simple-perl (0.11-7) ... Setting up mlv-smile (1.47-8) ... Setting up libplacebo349:amd64 (7.349.0-2) ... Setting up libx265-209:amd64 (3.6-3) ... Setting up libencode-perl:amd64 (3.21-1+b1) ... Setting up libcrypt-rc4-perl (2.02-5) ... Setting up libxv1:amd64 (2:1.0.11-1.1+b1) ... Setting up liblapack-dev:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libvariable-magic-perl (0.64-1) ... Setting up libio-html-perl (1.004-3) ... Setting up libxrandr2:amd64 (2:1.5.4-1) ... Setting up libpod-parser-perl (1.67-1) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-3+b1) ... Setting up cpp-14-x86-64-linux-gnu (14.2.0-3) ... Setting up libgav1-1:amd64 (0.19.0-2+b1) ... Setting up libmath-vecstat-perl (0.08-3) ... Setting up liblist-moreutils-xs-perl (0.430-4+b1) ... Setting up ucf (3.0043+nmu1) ... Setting up libmath-derivative-perl (1.01-3) ... Setting up netpbm (2:11.07.00-2) ... Setting up libcommons-lang3-java (3.14.0-1) ... Setting up libdpkg-perl (1.22.11) ... Setting up libspiffy-perl (0.46-1) ... Setting up libssh-4:amd64 (0.11.1-1) ... Setting up cpp-14 (14.2.0-3) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libhdf4-0-alt:amd64 (4.3.0-1) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up librubberband2:amd64 (3.3.0+dfsg-2+b2) ... Setting up libmath-round-perl (0.08-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libset-scalar-perl (1.29-3) ... Setting up libsub-name-perl:amd64 (0.27-1+b2) ... Setting up libtype-tiny-xs-perl:amd64 (0.025-2) ... Setting up libtamuanova-0.2 (0.2-5+b3) ... Setting up libgvpr2:amd64 (2.42.4-2) ... Setting up libgetopt-euclid-perl (0.4.6-1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up librttopo1:amd64 (1.1.0-3+b1) ... Setting up libparse-recdescent-perl (1.967015+dfsg-4) ... Setting up libfreecontact0t64:amd64 (1.0.21-14) ... Setting up libfreexl1:amd64 (2.0.0-1+b2) ... Setting up liblqr-1-0:amd64 (0.4.2-2.1+b1) ... Setting up libva-drm2:amd64 (2.22.0-1) ... Setting up libopenblas0:amd64 (0.3.28+ds-2) ... Setting up libmbedtls14t64:amd64 (2.28.8-1) ... Setting up xauth (1:1.1.2-1) ... Setting up libvdpau1:amd64 (1.5-3) ... Setting up libsord-0-0:amd64 (0.16.16-2+b1) ... Setting up libwayland-cursor0:amd64 (1.23.0-1) ... Setting up xml-core (0.19) ... Setting up hunspell-en-gb (1:24.8.0~rc1-1) ... Setting up libsratom-0-0:amd64 (0.6.16-1+b1) ... Setting up tcl (8.6.14) ... Setting up libxslt1.1:amd64 (1.1.35-1.1) ... Setting up mummer (3.23+dfsg-8) ... Setting up libtext-format-perl (0.63-1) ... Setting up gnupg (2.2.43-8) ... Setting up hunspell-en-us (1:2020.12.07-2) ... Setting up libpam-systemd:amd64 (256.6-1) ... Setting up hmmer (3.4+dfsg-2) ... Setting up libcarp-always-perl (0.16-1) ... Setting up libfcgi-perl (0.82+ds-3+b1) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up libgit2-1.7:amd64 (1.7.2+ds-1+b2) ... Setting up libc6-dev:amd64 (2.40-2) ... Setting up libharfbuzz0b:amd64 (9.0.0-1) ... Setting up plink2 (2.00~a5.8-231123+dfsg-1+b1) ... Setting up libcarp-clan-perl (6.08-2) ... Setting up theseus (3.3.0-14+b1) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ... Setting up libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2) ... Setting up libarmadillo14 (1:14.0.1+dfsg-2) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b3) ... Setting up libllvmspirvlib18.1:amd64 (18.1.4-1) ... Setting up libsnappy-java (1.1.10.5-2) ... Setting up libgraphics-colornames-perl (3.5.0-3.1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b1) ... Setting up libdevel-symdump-perl (2.18-5) ... Setting up libxss1:amd64 (1:1.2.3-1+b1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up libsndfile1:amd64 (1.2.2-1+b2) ... Setting up ca-certificates-java (20240118) ... No JRE found. Skipping Java certificates setup. Setting up libexporter-tiny-perl (1.006002-1) ... Setting up libgcc-14-dev:amd64 (14.2.0-3) ... Setting up libcommons-codec-java (1.16.0-1) ... Setting up libbluray2:amd64 (1:1.3.4-1+b1) ... Setting up libva-x11-2:amd64 (2.22.0-1) ... Setting up libgoogle-glog0v6t64 (0.6.0-2.1) ... Setting up gff2aplot (2.0-15) ... Setting up libclang-cpp18 (1:18.1.8-11) ... Setting up libstdc++-14-dev:amd64 (14.2.0-3) ... Setting up mailcap (3.72) ... Setting up libpostscript-perl (0.06-3.1) ... Setting up plink1.9 (1.90~b7.2-231211-1) ... Setting up libsm6:amd64 (2:1.2.3-1+b1) ... Setting up liblilv-0-0:amd64 (0.24.24-2) ... Setting up libicu-dev:amd64 (72.1-5) ... Setting up libclang-rt-18-dev:amd64 (1:18.1.8-11) ... Setting up libsort-naturally-perl (1.03-4) ... Setting up sysstat (12.7.5-2) ... Creating config file /etc/default/sysstat with new version update-alternatives: using /usr/bin/sar.sysstat to provide /usr/bin/sar (sar) in auto mode Created symlink '/etc/systemd/system/sysstat.service.wants/sysstat-collect.timer' → '/usr/lib/systemd/system/sysstat-collect.timer'. Created symlink '/etc/systemd/system/sysstat.service.wants/sysstat-rotate.timer' → '/usr/lib/systemd/system/sysstat-rotate.timer'. Created symlink '/etc/systemd/system/sysstat.service.wants/sysstat-summary.timer' → '/usr/lib/systemd/system/sysstat-summary.timer'. Created symlink '/etc/systemd/system/multi-user.target.wants/sysstat.service' → '/usr/lib/systemd/system/sysstat.service'. Setting up exonerate (2.4.0-5+b1) ... Setting up libopenmpt0t64:amd64 (0.7.9-1) ... Setting up libavahi-client3:amd64 (0.8-13+b2) ... Setting up liburi-perl (5.29-1) ... Setting up libx11-protocol-perl (0.56-9) ... Setting up libdbi-perl:amd64 (1.645-1) ... Setting up gmap (2024-08-20+ds-1) ... Setting up libdate-manip-perl (6.95-1) ... Setting up libfile-sort-perl (1.01-3) ... Setting up libmath-vec-perl (1.01-5) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Setting up binutils-x86-64-linux-gnu (2.43.1-3) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libtext-csv-perl (2.04-1) ... Setting up libbz2-dev:amd64 (1.0.8-6) ... Setting up libnet-ssleay-perl:amd64 (1.94-1+b1) ... Setting up cpp-x86-64-linux-gnu (4:14.1.0-2) ... Setting up cd-hit (4.8.1-4) ... Setting up libmath-spline-perl (0.02-4) ... Setting up libgfortran-14-dev:amd64 (14.2.0-3) ... Setting up libjcode-pm-perl (2.06-1.1) ... Setting up libio-sessiondata-perl (1.03-3) ... Setting up vcftools (0.1.16-3+b1) ... Setting up libpaper1:amd64 (1.1.29+b1) ... Creating config file /etc/papersize with new version Setting up gtk-update-icon-cache (4.16.1+ds-2) ... Setting up libgts-bin (0.7.6+darcs121130-5.2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libibverbs1:amd64 (52.0-2) ... Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up rtax (0.984-8) ... Setting up libavif16:amd64 (1.1.0-3) ... Setting up libxft2:amd64 (2.3.6-1+b1) ... Setting up libboost1.83-dev:amd64 (1.83.0-3.2) ... Setting up libncurses-dev:amd64 (6.5-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up sigma-align (1.1.3-9) ... Setting up libtie-ixhash-perl (1.23-4) ... Setting up libconfig-general-perl (2.65-2) ... Setting up libtask-weaken-perl (1.06-2) ... Setting up libset-intspan-perl (1.19-3) ... Setting up libatk1.0-0t64:amd64 (2.54.0-1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libzmq5:amd64 (4.3.5-1+b2) ... Setting up openjdk-21-jre-headless:amd64 (21.0.5~8ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jpackage to provide /usr/bin/jpackage (jpackage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libconvert-binary-c-perl (0.84-1+b4) ... Setting up libpcre2-dev:amd64 (10.42-4+b1) ... Setting up libxi6:amd64 (2:1.8.1-1) ... Setting up gpg-wks-client (2.2.43-8+b1) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libfont-afm-perl (1.20-4) ... Setting up libcommons-compress-java (1.25.0-1) ... Setting up libdynaloader-functions-perl (0.004-1) ... Setting up libcassie1v5 (1.0.9-4+b1) ... Setting up libtest-deep-perl (1.204-1) ... Setting up libcurl4t64:amd64 (8.9.1-2) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up libxml-regexp-perl (0.04-1.1) ... Setting up libref-util-xs-perl (0.117-2+b3) ... Setting up libalgorithm-munkres-perl (0.08-5) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Setting up ibverbs-providers:amd64 (52.0-2) ... Setting up perl-tk (1:804.036+dfsg1-3) ... Setting up libio-pty-perl (1:1.20-1+b1) ... Setting up libogdi4.1:amd64 (4.1.1+ds-4) ... Setting up libpulse0:amd64 (16.1+dfsg1-5.1) ... Setting up libfile-fcntllock-perl (0.22-4+b3) ... Setting up mafft (7.505-1) ... Setting up libclone-perl:amd64 (0.47-1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libsub-identify-perl (0.14-3+b2) ... Setting up libgetopt-simple-perl (1.52-7) ... Setting up libcommons-io-java (2.16.1-1) ... Setting up libdrm-radeon1:amd64 (2.4.123-1) ... Setting up openssh-client (1:9.8p1-8) ... Setting up wise (2.4.1-25) ... Setting up libio-stringy-perl (2.113-2) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libxtst6:amd64 (2:1.2.3-1.1+b1) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libauthen-sasl-perl (2.1700-1) ... Setting up libtk8.6:amd64 (8.6.14-1) ... Setting up libxcursor1:amd64 (1:1.2.2-1) ... Setting up liblatex-tounicode-perl (0.55-1) ... Setting up libfile-slurp-tiny-perl (0.004-2) ... Setting up libipc-sharelite-perl (0.17-5+b2) ... Setting up libconvert-binhex-perl (1.125-3) ... Setting up libheap-perl (0.80-5) ... Setting up libpod-coverage-perl (0.23-2) ... Setting up libperl4-corelibs-perl (0.005-1) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libdrm-intel1:amd64 (2.4.123-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.89+ds-1+b1) ... Setting up python3.12-tk (3.12.6-1) ... Setting up cassiopee (1.0.9-4+b1) ... Setting up libtest-pod-perl (1.52-3) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libtype-tiny-perl (2.004000-1) ... Setting up libncbi-vdb3:amd64 (3.0.2+dfsg-2+b1) ... Setting up libpq5:amd64 (17~rc1-1) ... Setting up libxxf86dga1:amd64 (2:1.1.5-1+b1) ... Setting up libcurl3t64-gnutls:amd64 (8.9.1-2) ... Setting up libcloudproviders0:amd64 (0.3.6-1) ... Setting up perl-doc (5.38.2-5) ... Setting up libgraphics-colorobject-perl (0.5.0-10.1) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libsvg-perl (2.87-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libjxl0.9:amd64 (0.9.2-10) ... Setting up libbsd-resource-perl (1.2911-2+b3) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libdbd-pg-perl (3.18.0-1+b2) ... Setting up libtext-csv-xs-perl:amd64 (1.56-1) ... Setting up libtbb12:amd64 (2021.12.0-1) ... Setting up rubygems-integration (1.18) ... Setting up fsa (1.15.9+dfsg-6) ... Setting up libnumber-format-perl (1.76-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libfindbin-libs-perl (3.0.2-1) ... Setting up binutils (2.43.1-3) ... Setting up libkmlengine1t64:amd64 (1.3.0-12) ... Setting up libpaper-utils (1.1.29+b1) ... Setting up libio-all-perl (0.87-2) ... Setting up libaprutil1-ldap:amd64 (1.6.3-3) ... Setting up libreadline-dev:amd64 (8.2-5) ... Setting up libxstring-perl:amd64 (0.005-2+b3) ... Setting up libgraph-perl (1:0.9729-1) ... Setting up libxerces-c3.2t64:amd64 (3.2.4+debian-1.3) ... Setting up dssp (4.2.2-2) ... Setting up xfonts-utils (1:7.7+7) ... Setting up mupdf-tools (1.24.8+ds2-2+b2) ... Setting up apache2-bin (2.4.62-1) ... Setting up libhwloc-plugins:amd64 (2.11.0-2) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1) ... Setting up libyaml-perl (1.31-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libavutil59:amd64 (7:7.0.2-3) ... Setting up libcairo2:amd64 (1.18.2-1) ... Setting up python3.13-tk (3.13.0~rc2-1) ... Setting up libregexp-common-perl (2024080801-1) ... Setting up libmath-bezier-perl (0.01-4) ... Setting up libspreadsheet-writeexcel-perl (2.40-4) ... Setting up libcolord2:amd64 (1.4.7-1+b1) ... Setting up libmath-random-mt-perl (1.17-2+b3) ... Setting up dpkg-dev (1.22.11) ... Setting up libbit-vector-perl:amd64 (7.4-3+b1) ... Setting up libfreezethaw-perl (0.5001-3) ... Setting up libpostproc58:amd64 (7:7.0.2-3) ... Setting up liberror-perl (0.17029-2) ... Setting up libdconf1:amd64 (0.40.0-4+b2) ... Setting up libdigest-perl-md5-perl (1.9-5) ... Setting up libsphinxbase3t64:amd64 (0.8+5prealpha+1-18) ... Setting up tex-common (6.18) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libreadonly-perl (2.050-3) ... Setting up dbus-user-session (1.14.10-4+b1) ... Setting up libswresample5:amd64 (7:7.0.2-3) ... Setting up libunicode-map-perl (0.112-13+b3) ... Setting up libmath-tamuanova-perl (1.0.2-4+b1) ... Setting up libswscale8:amd64 (7:7.0.2-3) ... Setting up libtirpc-dev:amd64 (1.3.4+ds-1.3) ... Setting up libcfitsio10t64:amd64 (4.4.1-2) ... Setting up libass9:amd64 (1:0.17.3-1) ... Setting up libtest-exception-perl (0.43-3) ... Setting up adwaita-icon-theme (47.0-1) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libjpeg62-turbo-dev:amd64 (1:2.1.5-3) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libatspi2.0-0t64:amd64 (2.54.0-1) ... Setting up libraqm0:amd64 (0.10.1-1+b1) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2) ... Setting up libncbi-wvdb3:amd64 (3.0.2+dfsg-2+b1) ... Setting up libdbd-mysql-perl:amd64 (4.052-1+b2) ... Setting up libipc-run-perl (20231003.0-2) ... Setting up libpmix2t64:amd64 (5.0.3-2) ... Setting up parallel (20240222+ds-2) ... Setting up libfile-desktopentry-perl (0.22-3) ... Setting up libole-storage-lite-perl (0.22-1) ... Setting up libspreadsheet-parseexcel-perl (0.6600-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libtree-dagnode-perl (1.32-1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up libhttpclient-java (4.5.14-1) ... Setting up libgdk-pixbuf2.0-bin (2.42.12+dfsg-1) ... Setting up cpp (4:14.1.0-2) ... Setting up lmodern (2.005-1) ... Setting up libhtml-parser-perl:amd64 (3.83-1) ... Setting up libtheora0:amd64 (1.1.1+dfsg.1-17) ... Setting up libnsl2:amd64 (1.3.0-3+b2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libpoppler140:amd64 (24.08.0-2) ... Setting up libhts3t64:amd64 (1.20+ds-1) ... Setting up librdmacm1t64:amd64 (52.0-2) ... Setting up libdbd-sqlite3-perl:amd64 (1.74-1+b2) ... Setting up liblightcouch-java (0.2.0-1) ... Setting up libcairo-gobject2:amd64 (1.18.2-1) ... Setting up libboost-dev:amd64 (1.83.0.2+b2) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up libtbb-dev:amd64 (2021.12.0-1) ... Setting up mesa-va-drivers:amd64 (24.2.2-1) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-3) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up libalgorithm-diff-xs-perl:amd64 (0.04-8+b3) ... Setting up libcups2t64:amd64 (2.4.10-1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up libhsakmt1:amd64 (5.7.0-1) ... Setting up i965-va-driver:amd64 (2.4.1+dfsg1-1) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... Setting up libstatistics-basic-perl (1.6611-3) ... Setting up libalgorithm-merge-perl (0.08-5) ... Setting up libhttp-message-perl (6.46-1) ... Setting up flexbar (1:3.5.0-5) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libncbi-ngs3:amd64 (3.0.3+dfsg-9) ... Setting up libbio-perl-run-perl (1.7.3-11) ... Setting up libatk-bridge2.0-0t64:amd64 (2.54.0-1) ... Setting up mesa-opencl-icd:amd64 (24.2.2-1) ... Setting up libfabric1:amd64 (1.17.0-3+b1) ... Setting up sra-toolkit (3.0.3+dfsg-9) ... Setting up mesa-vdpau-drivers:amd64 (24.2.2-1) ... Setting up libfile-mimeinfo-perl (0.35-1) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up mesa-libgallium:amd64 (24.2.2-1) ... Setting up libngs-jni:amd64 (3.0.3+dfsg-9) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libnetcdf19t64:amd64 (1:4.9.2-7) ... Setting up libxmu6:amd64 (2:1.1.3-3+b2) ... Setting up libstatistics-descriptive-perl (3.0801-1) ... Setting up libpython3.12-stdlib:amd64 (3.12.6-1) ... Setting up libdate-calc-perl (6.4-2) ... Setting up gcc-x86-64-linux-gnu (4:14.1.0-2) ... Setting up libcache-cache-perl (1.08-3) ... Setting up altree (1.3.2-2+b3) ... Setting up libproj25:amd64 (9.5.0-1) ... Setting up libgbm1:amd64 (24.2.2-1) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libdate-calc-xs-perl:amd64 (6.4-2+b3) ... Setting up freecontact (1.0.21-14) ... Setting up gatb-core (1.4.2+dfsg-13+b1) ... Setting up liblog4j2-java (2.19.0-2) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.6-1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b3) ... Setting up libcgi-pm-perl (4.66-1) ... Setting up libgl1-mesa-dri:amd64 (24.2.2-1) ... Setting up libpng-dev:amd64 (1.6.44-1) ... Setting up bcftools (1.20-2) ... Setting up libhmsbeagle1v5:amd64 (3.1.2+dfsg-13+b1) ... Setting up grinder (0.5.4-6) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libjpeg-dev:amd64 (1:2.1.5-3) ... Setting up libstaden-read14t64:amd64 (1.15.0-1.1+b1) ... Setting up proj-bin (9.5.0-1) ... Setting up mrbayes (3.2.7a-7+b1) ... Setting up dconf-service (0.40.0-4+b2) ... Setting up libhtml-format-perl (2.16-2) ... Setting up libxaw7:amd64 (2:1.0.14-1+b2) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up libpoppler-cpp1:amd64 (24.08.0-2) ... Setting up libbibtex-parser-perl (1.05+dfsg-1) ... Setting up x11-xserver-utils (7.7+10+b1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-14 (14.2.0-3) ... Setting up libgeotiff5:amd64 (1.7.3-1) ... Setting up gfortran-14-x86-64-linux-gnu (14.2.0-3) ... Setting up samtools (1.20-3) ... Setting up librsvg2-2:amd64 (2.59.0+dfsg-3) ... Setting up libpocketsphinx3:amd64 (0.8+5prealpha+1-15+b3) ... Setting up bcalm (2.2.3-5+b1) ... Setting up libegl-mesa0:amd64 (24.2.2-1) ... Setting up libnet-smtp-ssl-perl (1.04-2) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libmailtools-perl (2.21-3) ... Setting up va-driver-all:amd64 (2.22.0-1) ... Setting up jellyfish (2.3.1-3+b5) ... Setting up r-base-core (4.4.1-3) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-crayon (1.5.2-1) ... Setting up r-cran-squarem (2021.1-1) ... Setting up minia (3.2.6-4+b1) ... Setting up r-cran-fastmatch (1.1-4-1) ... Setting up r-cran-gparotation (2024.2-1-1) ... Setting up libxml-filter-buffertext-perl (1.01-7) ... Setting up r-cran-labeling (0.4.3-1) ... Setting up r-cran-biasedurn (2.0.11-1) ... Setting up libavcodec61:amd64 (7:7.0.2-3) ... Setting up libace-perl (1.92-12) ... Setting up r-cran-rcppprogress (0.4.2-2) ... Setting up r-cran-sourcetools (0.1.7-1-1) ... 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Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up r-cran-remotes (2.5.0+dfsg-1) ... Setting up libhtml-tableextract-perl (2.15-2) ... Setting up r-cran-zip (2.3.1-1) ... Setting up r-cran-xml (3.99-0.17-1) ... Setting up r-cran-gss (2.2-7-1) ... Setting up r-cran-whisker (0.4.1-1) ... Setting up libhttp-daemon-perl (6.16-1) ... Setting up r-cran-viridislite (0.4.2-2) ... Setting up r-cran-locfit (1.5-9.10-1) ... Setting up texlive-binaries (2024.20240313.70630+ds-4) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up r-cran-g.data (2.4.1-1) ... Setting up libhsa-runtime64-1:amd64 (5.7.1-3) ... Setting up r-cran-cluster (2.1.6-1) ... Setting up r-cran-rhpcblasctl (0.23-42-1+b1) ... Setting up r-cran-fontbitstreamvera (0.1.1+dfsg-4) ... Setting up genometools-common (1.6.5+ds-2.2) ... Setting up r-cran-sparsem (1.84-2-1+b1) ... Setting up libegl1:amd64 (1.7.0-1+b1) ... Setting up r-cran-statmod (1.5.0-1) ... Setting up g++-x86-64-linux-gnu (4:14.1.0-2) ... Setting up r-cran-nnet (7.3-19-2) ... Setting up r-cran-lazyeval (0.2.2-1+b1) ... Setting up r-cran-lpsolve (5.6.21-1) ... Setting up r-cran-insight (0.20.4+dfsg-1) ... Setting up r-cran-clipr (0.8.0-1) ... Setting up r-cran-polynom (1.4-1+dfsg-1) ... 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Setting up texlive-base (2024.20240829-2) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up r-cran-rcppparallel (5.1.7+dfsg-5+b1) ... Setting up r-cran-magrittr (2.0.3-1) ... Setting up r-cran-desolve (1.40-1) ... Setting up r-cran-fit.models (0.64-1) ... Setting up r-cran-testit (0.13-1) ... Setting up r-cran-rappdirs (0.3.3-1) ... Setting up libhtsjdk-java (4.1.0+dfsg-2) ... Setting up r-cran-janeaustenr (1.0.0-1) ... Setting up libbarclay-java (5.0.0+dfsg-1) ... Setting up staden-io-lib-utils (1.15.0-1.1+b1) ... Setting up r-cran-emoa (0.5-2-1) ... Setting up r-cran-evd (2.3-7-1) ... Setting up r-cran-microbenchmark (1.5.0-1) ... 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Setting up r-cran-praise (1.0.0-4) ... Setting up r-cran-truncnorm (1.0-9-2) ... Setting up r-cran-pan (1.9-1) ... Setting up r-cran-vipor (0.4.7-1) ... Setting up r-cran-gmp (0.7-4-1) ... Setting up r-cran-generics (0.1.3-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up r-cran-base64enc (0.1-3-3) ... Setting up r-cran-beeswarm (0.4.0-1+b1) ... Setting up r-cran-iterators (1.0.14-1) ... Setting up r-cran-spatial (7.3-17-1) ... Setting up r-cran-fontliberation (0.1.0+dfsg-5) ... Setting up libmoo-perl (2.005005-1) ... Setting up r-cran-abind (1.4-8-1) ... Setting up r-cran-digest (0.6.37-1) ... Setting up r-cran-ape (5.8-1) ... Setting up r-cran-sfsmisc (1.1-18-1) ... Setting up r-cran-yaml (2.3.10-1) ... Setting up r-cran-lambda.r (1.2.4-2) ... Setting up r-cran-webfakes (1.3.0-1) ... Setting up r-cran-rann (2.6.2-1) ... Setting up r-cran-gower (1.0.1-1) ... Setting up r-cran-evaluate (0.24.0-1) ... Setting up r-cran-docopt (0.7.1-2) ... Setting up r-cran-dbi (1.2.3-1) ... Setting up r-cran-timedate (4032.109-1) ... Setting up r-cran-highr (0.11+dfsg-1) ... Setting up r-cran-foreach (1.5.2-1) ... Setting up r-cran-prettyunits (1.2.0-1) ... Setting up r-cran-fansi (1.0.5-1) ... Setting up r-cran-fastica (1.2-5.1-1) ... Setting up r-cran-cardata (3.0.5-1) ... Setting up r-cran-mass (7.3-61-1) ... Setting up r-cran-logspline (2.1.22-1) ... Setting up r-cran-sendmailr (1.4-0-1) ... Setting up r-cran-rsolnp (1.16+dfsg-4) ... Setting up r-cran-checkmate (2.3.1-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up r-cran-cairo (1.6-2-1) ... Setting up r-cran-acepack (1.4.2-1) ... Setting up r-cran-mclust (6.1.1-1) ... Setting up r-cran-dicedesign (1.10-1) ... Setting up python3 (3.12.5-1+b1) ... /usr/share/arden/core/AnalyseMapping.py:169: SyntaxWarning: invalid escape sequence '\d' mism = sum([i.size for i in cigar if i.type=="M"]) - getsum(re.findall("(\d+)", alngt.optional_field("MD"))) /usr/share/arden/core/AnalyseMapping.py:252: SyntaxWarning: invalid escape sequence '\d' deletions = getsum(re.findall("(\d+)D", cigar)) /usr/share/arden/core/AnalyseMapping.py:253: SyntaxWarning: invalid escape sequence '\d' insertions = getsum(re.findall("(\d+)I", cigar)) /usr/share/arden/core/AnalyseMapping.py:260: SyntaxWarning: invalid escape sequence '\d' mismatch = getsum(re.findall("(\d+)M", cigar)) - getsum(re.findall("(\d+)", mdtag)) /usr/share/arden/core/AnalyseMapping.py:260: SyntaxWarning: invalid escape sequence '\d' mismatch = getsum(re.findall("(\d+)M", cigar)) - getsum(re.findall("(\d+)", mdtag)) /usr/share/arden/core/AnalyseMapping.py:651: SyntaxWarning: invalid escape sequence '\d' m = re.search(tag + ":i:(\d+)", line) /usr/share/arden/core/AnalyseMapping.py:717: SyntaxWarning: invalid escape sequence '\d' match = re.findall("(\d+)[MDN]", cigar) /usr/share/arden/core/AnalyseMapping.py:917: SyntaxWarning: invalid escape sequence '\s' mdtag = re.search("MD:Z:([^\s]+)", tags).group(1) /usr/share/arden/core/AnalyseMapping.py:919: SyntaxWarning: invalid escape sequence '\s' mdtag = re.search("MD:Z:([^\s]+)", tags).group(1) /usr/share/discosnp/discoSnpRAD/clustering_scripts/fasta_and_cluster_to_filtered_vcf.py:146: SyntaxWarning: invalid escape sequence '\w' tig_type = len(re.findall("left_\w+_length",line)) /usr/share/discosnp/scripts/ClassVCF_creator.py:82: SyntaxWarning: invalid escape sequence '\d' parsingCigarCode=re.findall('(\d+|[A-Za-z])',cigarcode) #ParsingCigarCode=['2', 'S', '3', 'M', '1', 'I', '25', 'M'] /usr/share/discosnp/scripts/ClassVCF_creator.py:566: SyntaxWarning: invalid escape sequence '\d' parsingCigarCode=re.findall('(\d+|[A-Za-z])',cigarcode) #ParsingCigarCode=['2', 'S', '3', 'M', '1', 'I', '25', 'M'] /usr/share/discosnp/scripts/ClassVCF_creator.py:639: SyntaxWarning: invalid escape sequence '\d' parsingPosMut=re.findall('(\d+|[A-Za-z]|\^)',posMut) /usr/share/discosnp/scripts/create_filtered_vcf.py:90: SyntaxWarning: invalid escape sequence '\w' tig_type = len(re.findall("left_\w+_length",line)) /usr/share/discosnp/scripts/vcf_formatting_functions.py:94: SyntaxWarning: invalid escape sequence '\w' ty = re.findall("(\w+)_higher_path",path_name)[0] /usr/share/discosnp/scripts/vcf_formatting_functions.py:102: SyntaxWarning: invalid escape sequence '\d' unitig_len = re.findall("_unitig_length_(\d+)","|".join(splitted_1[4:6])) /usr/share/discosnp/scripts/vcf_formatting_functions.py:106: SyntaxWarning: invalid escape sequence '\d' contig_len = re.findall("_contig_length_(\d+)","|".join(splitted_1[6:8])) /usr/share/discosnp/scripts/vcf_formatting_functions.py:139: SyntaxWarning: invalid escape sequence '\d' POS, REF, ALT = re.findall("P_\d+:(\d+)_(\w)/(\w)",pol)[0] /usr/share/discosnp/scripts/vcf_formatting_functions.py:142: SyntaxWarning: invalid escape sequence '\d' POS, indel_size = re.findall("P_\d+:(\d+)_(\d+)",pol)[0] Setting up r-cran-setrng (2022.4-1-1) ... Setting up r-cran-packrat (0.9.2-1) ... Setting up hhsuite (3.3.0+ds-8+b1) ... Setting up r-cran-nanoarrow (0.4.0-1) ... Setting up r-cran-sm (2.2-6.0-1) ... Setting up r-cran-truncdist (1.0-2-4) ... Setting up r-cran-gtools (3.9.5-1) ... Setting up r-cran-mapdata (2.3.1-1) ... Setting up r-cran-collapse (2.0.16-1) ... Setting up r-cran-kernlab (0.9-33-1) ... Setting up r-cran-energy (1.7-12-1) ... Setting up python3-zipp (3.20.2-1) ... Setting up r-cran-bdsmatrix (1.3-7-1) ... Setting up python3-freetype (2.5.1-1) ... Setting up r-cran-data.table (1.15.4+dfsg-2.2) ... Setting up python3-autocommand (2.2.2-3) ... Setting up r-cran-xopen (1.0.1+dfsg-1) ... Setting up r-cran-glue (1.7.0-1) ... Setting up r-cran-foreign (0.8.87-1) ... Setting up r-cran-prabclus (2.3-3-1) ... Setting up r-cran-gam (1.22-3-1) ... Setting up r-cran-fracdiff (1.5-3-1) ... Setting up r-cran-writexl (1.5.0-1) ... Setting up r-cran-tensora (0.36.2.1-1) ... Setting up libmime-tools-perl (5.515-1) ... Setting up r-cran-bit (4.0.5-1) ... Setting up python3-markupsafe (2.1.5-1+b1) ... Setting up r-cran-pki (0.1-12-2+b1) ... Setting up gfortran-x86-64-linux-gnu (4:14.1.0-2) ... Setting up r-cran-zeallot (0.1.0-3) ... Setting up r-cran-xtable (1:1.8-4-2) ... Setting up r-cran-polyclip (1.10-7-1) ... Setting up r-cran-cli (3.6.3-1) ... Setting up python3-webencodings (0.5.1-5) ... Setting up r-cran-rbibutils (2.2.16-1) ... Setting up r-cran-lifecycle (1.0.4+dfsg-1) ... Setting up r-cran-dotcall64 (1.1-1-1) ... Setting up r-cran-bitops (1.0-8-1) ... Setting up r-bioc-biocversion (3.19.1-1) ... Setting up python3-psutil (5.9.8-2) ... Setting up r-cran-rprojroot (2.0.4-1) ... Setting up r-cran-fnn (1.1.4-1) ... Setting up libavformat61:amd64 (7:7.0.2-3) ... Setting up r-cran-mlbench (2.1-5-1) ... Setting up r-cran-bit64 (4.0.5-1) ... Setting up r-cran-xmlparsedata (1.0.5-2) ... Setting up python3-tz (2024.1-2) ... Setting up r-cran-biocmanager (1.30.25+dfsg-1) ... Setting up r-cran-enrichwith (0.3.1+dfsg-2) ... Setting up gcc (4:14.1.0-2) ... Setting up r-cran-progressr (0.14.0-1) ... Setting up r-cran-dichromat (1:2.0-0.1-1) ... Setting up last-align (1542-1+b1) ... Setting up r-cran-hsaur3 (1.0-15-1) ... Setting up r-cran-robumeta (2.1-1) ... Setting up r-cran-deldir (2.0-4-1) ... Setting up bowtie2 (2.5.4-1) ... Setting up r-cran-renv (1.0.7-1) ... Setting up r-cran-randomforest (4.7-1.1-1) ... Setting up r-cran-ellipse (0.5.0-1) ... Setting up r-cran-admisc (0.36-1) ... Setting up r-cran-shape (1.4.6-1) ... Setting up python3-cykhash (2.0.0-3+b1) ... Setting up r-cran-askpass (1.2.0-1) ... Setting up ncbi-blast+ (2.16.0+ds-6) ... Setting up r-cran-fastmap (1.2.0-1) ... Setting up r-cran-png (0.1-8-1+b1) ... Setting up python3-six (1.16.0-7) ... Setting up python3-simplejson (3.19.3-1) ... Setting up r-cran-sodium (1.3.1+dfsg-1) ... Setting up r-cran-r.methodss3 (1.8.2-1) ... Setting up r-bioc-biobase (2.64.0-4) ... Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... Setting up r-cran-mnormt (2.1.1-2) ... Setting up python3-pil:amd64 (10.4.0-1) ... Setting up r-cran-corrplot (0.94-1) ... Setting up r-cran-rstudioapi (0.16.0-1) ... Setting up r-cran-rose (0.0-4-2) ... Setting up libarray-compare-perl (3.0.8-1) ... Setting up r-cran-pkgconfig (2.0.3-2) ... Setting up libpicard-java (3.1.1+dfsg-1) ... Setting up python3-roman (4.2-1) ... Setting up r-cran-mapproj (1.2.11-1) ... Setting up r-cran-quickjsr (1.1.3-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up liblist-someutils-xs-perl:amd64 (0.58-3+b2) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up r-cran-linprog (0.9-4-1) ... Setting up r-cran-sp (1:2.1-2+dfsg-1) ... Setting up r-cran-utf8 (1.2.4-1) ... Setting up r-cran-brew (1.0-10-1) ... Setting up liblist-allutils-perl (0.19-1) ... Setting up python3-packaging (24.1-1) ... Setting up r-cran-colorspace (2.1-0+dfsg-1) ... Setting up r-cran-parallelly (1.38.0-1) ... Setting up libgl1:amd64 (1.7.0-1+b1) ... Setting up r-cran-rcsdp (0.1.57.5-1) ... Setting up r-cran-warp (0.2.1-1) ... Setting up r-cran-stringi (1.8.4-1) ... Setting up libamdhip64-5 (5.7.1-3) ... Setting up r-cran-elliptic (1.4-0-2) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up texlive-latex-base (2024.20240829-2) ... Setting up r-cran-rex (1.2.1-1) ... Setting up python3-certifi (2024.8.30-1) ... Setting up r-cran-swagger (5.17.14-1) ... Setting up r-cran-markdown (1.12+dfsg-2) ... Setting up r-cran-gitcreds (0.1.2-1) ... Setting up r-cran-leaps (3.2-1) ... Setting up r-cran-plotrix (3.8-4-1) ... Setting up r-cran-nnls (1.5-1) ... Setting up r-cran-expint (0.1-8-1) ... Setting up r-cran-sjlabelled (1.2.0-1) ... Setting up r-cran-cpp11 (0.4.7-1) ... Setting up r-cran-mvtnorm (1.3-1-1) ... Setting up r-cran-optimx (2023-10.21-1) ... Setting up r-cran-plyr (1.8.9-1) ... Setting up r-cran-rcolorbrewer (1.1-3-1) ... Setting up python3-brotli (1.1.0-2+b4) ... Setting up r-cran-ini (0.3.1-2) ... Setting up r-cran-isoband (0.2.7-1) ... Setting up r-cran-stabledist (0.7-2-1) ... Setting up r-cran-runit (0.4.33-1) ... Setting up r-cran-futile.logger (1.4.3-4) ... Setting up r-cran-ucminf (1.2.2-1) ... Setting up r-cran-diagram (1.6.5-2) ... Setting up r-cran-scatterplot3d (0.3-44-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up r-cran-pingr (2.0.3-1) ... Setting up r-cran-multcompview (0.1-9-1) ... Setting up r-bioc-limma (3.60.4+dfsg-1) ... Setting up python3-kiwisolver (1.4.5-1+b1) ... Setting up r-cran-hypergeo (1.2-13-4) ... Setting up r-bioc-hilbertvis (1.62.0-1) ... Setting up r-cran-irace (3.5-2) ... Setting up r-cran-gtable (0.3.5+dfsg-1) ... Setting up python3-idna (3.8-2) ... Setting up r-cran-pscl (1.5.9-1) ... Setting up r-cran-rmysql (0.10.28-1) ... Setting up r-cran-flexmix (2.3-19-1) ... Setting up r-cran-zoo (1.8-12-2) ... Setting up libavfilter10:amd64 (7:7.0.2-3) ... Setting up r-cran-geosphere (1.5-18-1) ... Setting up r-cran-pander (0.6.5+dfsg-3+deb12u1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up r-cran-later (1.3.2+dfsg-1) ... Setting up r-cran-matrix (1.7-0-3) ... Setting up r-cran-here (1.0.1-2) ... Setting up r-cran-doparallel (1.0.17-1) ... Setting up python3-html5lib (1.1-6) ... Setting up r-cran-magic (1.6-1-1) ... Setting up libxml-libxslt-perl:amd64 (2.002001-1+b2) ... Setting up r-cran-htmltools (0.5.8.1-1) ... Setting up genometools (1.6.5+ds-2.2) ... Setting up r-cran-tinytex (0.51-1) ... Setting up r-cran-irlba (2.3.5.1-4) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up r-cran-kernsmooth (2.23-24-1) ... Setting up r-cran-knitr (1.48+dfsg-1) ... Setting up r-cran-rcpptoml (0.2.2+dfsg-1) ... Setting up zutty (0.16.1.20240818+dfsg1-1) ... update-alternatives: using /usr/bin/zutty to provide /usr/bin/x-terminal-emulator (x-terminal-emulator) in auto mode Setting up r-cran-cba (0.2-25-1) ... Setting up r-cran-mgcv (1.9-1-1) ... Setting up idba (1.1.3-8) ... Setting up g++ (4:14.1.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up r-cran-memisc (0.99.31.7+dfsg-1) ... Setting up r-cran-plotmo (3.6.4-1) ... Setting up r-cran-chk (0.9.1-1) ... Setting up hisat2 (2.2.1-5) ... Setting up r-cran-robustbase (0.99-4-1) ... Setting up r-cran-rpostgresql (0.7-6+dfsg-1) ... Setting up r-cran-metadat (1.2-0-2) ... Setting up r-cran-dbscan (1.2-0+ds-1) ... Setting up r-cran-domc (1.3.8-1) ... Setting up python3-lxml:amd64 (5.3.0-1) ... Setting up r-cran-lobstr (1.1.2-1) ... Setting up r-cran-cachem (1.1.0-1) ... Setting up r-cran-lmtest (0.9.40-1) ... Setting up r-cran-sass (0.4.9+dfsg-1) ... Setting up r-cran-rcpproll (0.3.1-1) ... Setting up r-cran-lhs (1.2.0-1) ... Setting up x11-utils (7.7+7) ... Setting up build-essential (12.10) ... Setting up discosnp (1:2.6.2-3+b1) ... Setting up r-cran-bbmle (1.0.25.1-1) ... Setting up r-cran-catools (1.18.2-1+b1) ... Setting up python3-dateutil (2.9.0-2) ... Setting up r-cran-rtsne (0.17-1) ... Setting up r-cran-rcpparmadillo (14.0.2-1-1) ... Setting up r-cran-rmpfr (0.9-5-1) ... Setting up r-cran-pcapp (2.0-5-1) ... Setting up libatk-wrapper-java (0.40.0-3) ... Setting up r-cran-cvst (0.2-3-1) ... Setting up r-cran-tzdb (0.4.0-2) ... Setting up r-cran-tsp (1.2-4-1) ... Setting up r-cran-reticulate (1.39.0+dfsg-1) ... Setting up r-cran-statnet.common (4.9.0-1) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-tzlocal (5.2-1.1) ... Setting up python3-argcomplete (3.4.0-2) ... Setting up r-cran-globals (0.16.3-1) ... Setting up python3-cssselect (1.2.0-4) ... Setting up libparams-validate-perl:amd64 (1.31-2+b2) ... Setting up r-cran-rcurl (1.98-1.16+dfsg-1) ... Setting up libvdpau-va-gl1:amd64 (0.4.2-2) ... Setting up r-cran-sessioninfo (1.2.2-1) ... Setting up r-cran-metafor (4.6-0-1) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up r-cran-spam (2.10-0-1) ... Setting up r-cran-unitizer (1.4.20-1) ... Setting up python3-soupsieve (2.6-1) ... Setting up r-cran-gdata (3.0.0-1) ... Setting up r-cran-vctrs (0.6.5-1) ... Setting up r-cran-webutils (1.2.1-1) ... Setting up r-cran-brobdingnag (1.2-9-1) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up r-cran-splines2 (0.5.2-1) ... Setting up r-cran-polycor (0.8-1-1) ... Setting up python3-cffi-backend:amd64 (1.17.1-1) ... Setting up r-cran-rcppeigen (0.3.4.0.2-1) ... Setting up r-cran-bbmisc (1.13-1) ... Setting up r-cran-mitools (2.4-2) ... Setting up r-bioc-graph (1.82.0-1) ... Setting up r-cran-hunspell (3.0.3+dfsg2-2) ... Setting up libgs10:amd64 (10.04.0~dfsg-1) ... Setting up r-cran-pillar (1.9.0+dfsg-1) ... Setting up r-cran-stanheaders (2.32.5-1) ... Setting up bioperl (1.7.8-1) ... Setting up r-cran-extradistr (1.10.0-1) ... Setting up ncbi-blast+-legacy (2.16.0+ds-6) ... Setting up gsettings-desktop-schemas (47.1-1) ... Setting up python3-more-itertools (10.4.0-1) ... Setting up python3-elasticsearch (7.17.6-1) ... Setting up r-cran-fontquiver (0.2.1-4) ... Setting up r-cran-ellipsis (0.3.2-2) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.2-1) ... Setting up r-cran-minqa (1.2.8-1) ... Setting up mesa-vulkan-drivers:amd64 (24.2.2-1) ... Setting up r-cran-filehash (2.4-5-1) ... Setting up r-cran-rngtools (1.5.2-1) ... Setting up python3-attr (23.2.0-2) ... Setting up r-cran-itertools (0.1-3-3) ... Setting up python3-argh (0.31.2-1) ... Setting up r-cran-reshape (0.8.9-1) ... Setting up r-cran-openssl (2.2.0+dfsg-1) ... Setting up r-cran-actuar (3.3-4-1) ... Setting up r-cran-base64url (1.4-2+b1) ... Setting up r-cran-libcoin (1.0-10-1) ... Setting up r-cran-fields (16.2-1) ... Setting up r-cran-repr (1.1.7-1) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up python3-propka (3.5.1-1) ... Setting up r-cran-misctools (0.6-28-1) ... Setting up python3-pysam (0.22.1+ds-2+b1) ... Setting up python3-cairo (1.26.1-2) ... Setting up r-cran-stringr (1.5.1-1) ... Setting up python3-importlib-metadata (8.5.0-1) ... Setting up python3-hisat2 (2.2.1-5) ... Setting up python3-jaraco.functools (4.0.2-1) ... Setting up r-cran-class (7.3-22-2) ... Setting up bowtie (1.3.1-3) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up r-cran-distributional (0.4.0-1) ... Setting up r-cran-modelmetrics (1.2.2.2-1+b1) ... Setting up r-cran-callr (3.7.6-1) ... Setting up ssake (4.0.1-2) ... Setting up r-cran-openxlsx (4.2.7-1) ... Setting up r-cran-ordinal (2023.12-4-1) ... Setting up r-cran-mclogit (0.9.6-2) ... Setting up r-cran-vioplot (0.5.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b4) ... Setting up r-cran-selectr (0.4-2-2) ... Setting up r-cran-matchit (4.5.5-1) ... Setting up r-bioc-edger (4.2.1+dfsg-1) ... Setting up r-cran-matrixmodels (0.5-3-1) ... Setting up python3-charset-normalizer (3.3.2-4) ... Setting up python3-pytest (8.3.2-1) ... Setting up python3-unicodedata2 (15.1.0+ds-1+b2) ... Setting up r-cran-venndiagram (1.7.3-1) ... Setting up r-cran-ks (1.14.2-1) ... Setting up r-cran-desc (1.4.3-1) ... Setting up python3-olefile (0.46-3) ... Setting up r-cran-timeseries (4041.110-1) ... Setting up r-cran-xml2 (1.3.6-1) ... Setting up python3-typeguard (4.3.0-1) ... Setting up r-cran-mda (0.5-4-1) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up r-cran-munsell (0.5.1-1) ... Setting up r-cran-tibble (3.2.1+dfsg-2) ... Setting up r-cran-logcondens (2.1.8-1) ... Setting up dvisvgm (3.4.1+ds-1) ... Setting up python3-pdbx (2.0.1-2) ... Setting up isympy-common (1.13.2-1) ... Setting up r-cran-clock (0.7.0-1.1) ... Setting up r-cran-gridsvg (1.7-5-1) ... Setting up r-cran-sandwich (3.1-1-1) ... Setting up r-cran-proc (1.18.5-1) ... Setting up r-cran-dorng (1.8.6-1) ... Setting up r-cran-fontawesome (0.5.2-1) ... Setting up python3-tk:amd64 (3.12.6-1) ... Setting up r-cran-survival (3.7-0-1) ... Setting up r-cran-igraph (2.0.3-1) ... Setting up r-cran-cyclocomp (1.1.1-1) ... Setting up kissplice (2.6.7-1) ... Setting up r-cran-lavaan (0.6.18-1) ... Setting up r-cran-xts (0.14.0-1) ... Setting up r-cran-lintr (3.1.2-1) ... Setting up r-cran-qpdf (1.3.3+dfsg-1) ... Setting up r-cran-brglm2 (0.9.2+dfsg-1) ... Setting up r-cran-expm (0.999-9-1) ... Setting up r-cran-survey (4.2-1-1) ... Setting up r-cran-r.oo (1.26.0-1) ... Setting up r-cran-rdpack (2.6.1-1) ... Setting up ghostscript (10.04.0~dfsg-1) ... Setting up r-cran-tweenr (2.0.3-1) ... Setting up r-cran-future (1.34.0+dfsg-1) ... Setting up r-cran-vcd (1:1.4-12-1) ... Setting up gfortran (4:14.1.0-2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up r-cran-forcats (1.0.0-1) ... Setting up r-cran-geometry (0.4.7-1) ... Setting up python3-bs4 (4.12.3-3) ... Setting up libatk-wrapper-java-jni:amd64 (0.40.0-3+b2) ... Setting up r-cran-marginaleffects (0.21.0-1) ... Setting up r-cran-bench (1.1.3-1) ... Setting up r-cran-cmprsk (2.2-11-1) ... Setting up r-cran-fpc (2.2-11-1) ... Setting up r-cran-jquerylib (0.1.4+dfsg-4) ... Setting up r-cran-network (1.18.2-1) ... Setting up r-cran-psych (2.4.1-1) ... Setting up r-cran-strucchange (1.5-4-1) ... Setting up r-cran-lme4 (1.1-35.5-1) ... Setting up r-cran-tidyselect (1.2.1+dfsg-1) ... Setting up texlive-bibtex-extra (2024.20240829-1) ... Setting up r-cran-reshape2 (1.4.4-2) ... Setting up r-cran-interp (1.1-6-1) ... Setting up r-cran-mlmrev (1.0-8-2) ... Setting up r-cran-av (0.9.0+dfsg-1+b1) ... Setting up r-cran-emmeans (1.10.4+dfsg-1) ... Setting up r-cran-slider (0.3.1-1) ... Setting up r-cran-httr2 (1.0.4-1) ... Setting up r-cran-future.apply (1.11.2+dfsg-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up r-cran-sna (2.7-2-1) ... Setting up r-cran-systemfonts (1.1.0-1) ... Setting up r-cran-jomo (2.7-6-1) ... Setting up r-cran-ids (1.0.1-2) ... Setting up r-cran-inum (1.0-5-1) ... Setting up r-cran-timechange (0.3.0-1) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1) ... Setting up r-cran-emdbook (1.3.13+ds-1) ... Setting up r-cran-th.data (1.1-2-2) ... Setting up r-cran-rsconnect (1.3.1-1) ... Setting up r-cran-phangorn (2.11.1+dfsg-1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up r-cran-kmi (0.5.5-2) ... Setting up r-cran-httr (1.4.7+dfsg-1) ... Setting up r-cran-snakecase (0.11.0-2) ... Setting up isympy3 (1.13.2-1) ... Setting up r-cran-irdisplay (1.1-1) ... Setting up libgtk-3-0t64:amd64 (3.24.43-4) ... Setting up r-cran-gridextra (2.3-3) ... Setting up r-cran-hms (1.1.3-1) ... Setting up r-cran-scales (1.3.0-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up r-cran-memoise (2.0.1-1) ... Setting up r-cran-gamm4 (0.2-6-2) ... Setting up r-cran-lava (1.7.3+dfsg-1) ... Setting up r-cran-covr (3.6.4+dfsg-1) ... Setting up r-cran-promises (1.3.0+dfsg-1) ... Setting up r-cran-intergraph (2.0-4-2) ... Setting up r-cran-purrr (1.0.2-1) ... Setting up r-cran-e1071 (1.7-16-1) ... Setting up r-cran-vegan (2.6-8+dfsg-1) ... Setting up r-cran-maxlik (1.5-2-1) ... Setting up r-cran-credentials (2.0.1-1) ... Setting up r-cran-multcomp (1.4-26-2) ... Setting up r-cran-rstantools (2.4.0-1) ... Setting up r-cran-svglite (2.1.3-1+b1) ... Setting up r-cran-blob (1.2.4-1) ... Setting up r-cran-urlchecker (1.0.1-2) ... Setting up r-cran-bayesfactor (0.9.12-4.7+dfsg-1) ... Setting up libopenmpi3t64:amd64 (4.1.6-13.3) ... Setting up r-cran-psychtools (2.4.2-1) ... Setting up r-cran-paramhelpers (1.14.1-1) ... Setting up r-cran-earth (5.3.3-1) ... Setting up vdpau-driver-all:amd64 (1.5-3) ... Setting up r-cran-pkgbuild (1.4.4-1) ... Setting up at-spi2-core (2.54.0-1) ... Setting up r-cran-hardhat (1.4.0+dfsg-1) ... Setting up r-cran-bridgesampling (1.1-2-1) ... Setting up r-cran-rrcov (1.7-6-1) ... Setting up r-cran-lbfgsb3c (2020-3.3-1) ... Setting up r-cran-tikzdevice (0.12.6-1) ... Setting up r-cran-parallelmap (1.5.1-1) ... Setting up r-cran-whoami (1.3.0-2) ... Setting up r-cran-pdftools (3.4.0-1+b2) ... Setting up r-cran-seriation (1.5.5-1) ... Setting up r-cran-rcppml (0.3.7-2) ... Setting up r-cran-amelia (1.8.2-1) ... Setting up r-cran-dplyr (1.1.4-1) ... Setting up r-cran-rspectra (0.16-1-1) ... Setting up r-cran-drr (0.0.4-2) ... Setting up r-cran-gbutils (0.5-3) ... Setting up r-cran-cvar (0.5-2) ... Setting up r-cran-gmm (1.8-1) ... Setting up libboost-mpi1.83.0 (1.83.0-3.2) ... Setting up r-cran-gplots (3.1.3.1-1) ... Setting up r-cran-rsqlite (2.3.7-2) ... Setting up r-cran-clubsandwich (0.5.11-1) ... Setting up r-cran-spelling (2.3.0-1) ... Setting up r-cran-decor (1.0.2-1) ... Setting up r-cran-gh (1.4.1-1) ... Setting up r-cran-progress (1.2.3-1) ... Setting up r-cran-ttr (0.24.4-1) ... Setting up r-cran-ranger (0.16.0-1) ... Setting up openmpi-bin (4.1.6-13.3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up r-cran-posterior (1.5.0+dfsg-1) ... Setting up phyml (3:3.3.20220408-3+b1) ... Setting up r-cran-smcfcs (1.7.1+dfsg-1) ... Setting up r-cran-arm (1.14-4-1) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up r-cran-timereg (2.0.5-1) ... Setting up r-cran-glmnet (4.1-8-1) ... Setting up python3-pyfaidx (0.8.1.2-1) ... Setting up r-cran-lubridate (1.9.3+dfsg-1) ... Setting up r-cran-pkgload (1.4.0-1) ... Setting up r-cran-r.utils (2.12.3-1) ... Setting up r-cran-gargle (1.5.2-1) ... Setting up r-cran-rversions (2.1.2-1) ... Setting up r-cran-rocr (1.0-11-3) ... Setting up r-cran-webshot (0.5.5-1) ... Setting up r-cran-vroom (1.6.5-1) ... Setting up r-base-dev (4.4.1-3) ... Setting up r-cran-prodlim (2024.06.25-1) ... Setting up r-cran-blme (1.0-5-1) ... Setting up r-cran-conflicted (1.2.0-1.1) ... Setting up python3-joblib (1.3.2-2) ... Setting up r-cran-mlmetrics (1.1.3-1) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up r-cran-etm (1.1.1-1) ... Setting up r-cran-ddalpha (1.3.15-1) ... Setting up r-cran-lsmeans (2.30-0-2) ... Setting up r-cran-fbasics (4041.97-1) ... Setting up r-cran-ggplot2 (3.5.1+dfsg-1) ... Setting up r-cran-ggsignif (0.6.4-1) ... Setting up prime-phylo (1.0.11-12) ... Setting up r-cran-dimred (0.2.6-4) ... Setting up r-cran-cellranger (1.1.0-3) ... Setting up r-cran-dials (1.2.1-1) ... Setting up r-cran-r.devices (2.17.2+ds-1) ... Setting up libgromacs9:amd64 (2024.2-1) ... Setting up r-cran-effects (4.2.2-1) ... Setting up r-cran-httpuv (1.6.15+dfsg-1) ... Setting up r-cran-rematch2 (2.1.2-2) ... Setting up r-cran-rpart (4.1.23-1) ... Setting up mpi-default-bin (1.17) ... Setting up r-cran-publish (2023.01.17-1) ... Setting up r-cran-eaf (2.5-1+b1) ... Setting up r-cran-purrrlyr (0.0.8-1) ... Setting up r-cran-msm (1.7.1-1) ... Setting up r-cran-gert (2.1.1+dfsg-1) ... Setting up libgtk-3-bin (3.24.43-4) ... Setting up r-cran-ggsci (3.2.0-1) ... Setting up r-cran-modeldata (1.4.0-1) ... Setting up r-cran-gganimate (1.0.8-1) ... Setting up r-cran-latticeextra (0.6-30-1) ... Setting up r-cran-downlit (0.4.4-1) ... Setting up r-cran-batchjobs (1.9-1) ... Setting up r-cran-plm (2.6-4-1) ... Setting up r-cran-textshaping (0.3.7-2) ... Setting up gromacs (2024.2-1) ... Setting up r-cran-ipred (0.9-15-1) ... Setting up r-cran-furrr (0.3.1-1) ... Setting up python3-fs (2.4.16-4) ... Setting up r-cran-viridis (0.6.5-1) ... Setting up r-cran-lmertest (3.1-3-2) ... Setting up r-cran-rmpi (0.7-2-2) ... Setting up r-cran-rvest (1.0.4-1) ... Setting up r-cran-dtplyr (1.3.1-1) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up r-cran-coin (1.4-3-1) ... Setting up abyss (2.3.9-1) ... Setting up r-cran-plumber (1.2.1+ds-2) ... Setting up r-cran-bslib (0.7.0+dfsg-1) ... Setting up r-cran-ragg (1.3.2-1) ... Setting up r-cran-nmf (0.27-1) ... Setting up r-cran-readr (2.1.5-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up r-cran-waldo (0.5.3-1) ... Setting up r-cran-ggrepel (0.9.5-2) ... Setting up r-cran-mets (1.3.3+dfsg-1) ... Setting up r-cran-tidyr (1.3.1-1) ... Setting up r-cran-rcmdcheck (1.4.0-2) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up r-cran-recipes (1.0.10+dfsg-2) ... Setting up r-cran-rsample (1.2.1+dfsg-1) ... Setting up python3-reportlab (4.2.2-1) ... Setting up r-cran-googledrive (2.1.1-1) ... Setting up r-cran-partykit (1.2-20-1) ... Setting up r-cran-robust (0.7-4-1) ... Setting up r-cran-roxygen2 (7.3.2-1) ... Setting up python3-rpy2 (3.5.16-3) ... Setting up r-cran-batchtools (0.9.17+dfsg-1) ... Setting up r-cran-thematic (0.1.6-1) ... Setting up r-cran-googlesheets4 (1.1.1-1) ... Setting up python3-contourpy (1.3.0-1) ... Setting up r-cran-loo (2.8.0-1) ... Setting up r-cran-mlr (2.19.1+dfsg-1) ... Setting up r-cran-dbplyr (2.4.0+dfsg-1) ... Setting up r-cran-ggridges (0.5.6-1) ... Setting up r-cran-fgarch (4033.92-1) ... Setting up r-cran-ggbeeswarm (0.7.2-1) ... Setting up r-cran-quantmod (0.4.26-1) ... Setting up python3-htseq (2.0.5-2+b1) ... /usr/lib/python3/dist-packages/HTSeq/__init__.py:583: SyntaxWarning: invalid escape sequence '\=' _re_vcf_meta_comment = re.compile("^##([a-zA-Z]+)\=(.*)$") /usr/lib/python3/dist-packages/HTSeq/features.py:14: SyntaxWarning: invalid escape sequence '\s' _re_attr_main = re.compile("\s*([^\s\=]+)[\s=]+(.*)") /usr/lib/python3/dist-packages/HTSeq/features.py:15: SyntaxWarning: invalid escape sequence '\s' _re_attr_empty = re.compile("^\s*$") /usr/lib/python3/dist-packages/HTSeq/features.py:16: SyntaxWarning: invalid escape sequence '\s' _re_gff_meta_comment = re.compile("##\s*(\S+)\s+(\S*)") Setting up r-recommended (4.4.1-3) ... Setting up r-cran-rstan (2.32.5-2) ... Setting up r-cran-r.cache (0.16.0-1) ... Setting up r-cran-rtdists (0.11-5-1) ... Setting up r-cran-lavasearch2 (2.0.3+dfsg-1) ... Setting up r-cran-epi (2.53-1) ... Setting up r-cran-cowplot (1.1.3+dfsg-1) ... Setting up r-cran-ggforce (0.4.2-1) ... Setting up r-cran-patchwork (1.2.0-1) ... Setting up r-cran-readxl (1.4.3-1) ... Setting up r-cran-dendextend (1.17.1+dfsg-1) ... Setting up python3-pybedtools (0.10.0-1+b1) ... Setting up python3-scipy (1.13.1-5) ... Setting up r-cran-ggfortify (0.4.17+dfsg-1) ... Setting up r-cran-bayesplot (1.11.1-1) ... Setting up r-cran-haven (2.5.4-1) ... Setting up r-cran-usethis (3.0.0-1) ... Setting up python3-sklearn-lib:amd64 (1.4.2+dfsg-6) ... Setting up r-cran-themis (1.0.2-2) ... Setting up r-cran-caret (6.0-94+dfsg-1) ... Setting up r-cran-shiny (1.8.1.1+dfsg-1) ... Setting up r-cran-shinyjs (2.1.0-1) ... Setting up r-cran-tseries (0.10-57-1) ... Setting up r-cran-testthat (3.2.1.1-1) ... Setting up r-cran-party (1.3-17-1) ... Setting up fitgcp (0.0.20150429-5) ... Setting up r-cran-patrick (0.2.0-2) ... Setting up r-cran-mockery (0.4.4+dfsg-1) ... Setting up python3-biomaj3-core (3.0.28-2) ... Setting up r-cran-miniui (0.1.1.1-3) ... Setting up r-cran-broom (1.0.6+dfsg-1) ... Setting up r-cran-mitml (0.4-5-1) ... Setting up conservation-code (20110309.0-8) ... Setting up python3-biomaj3-cli (3.1.11-5) ... Setting up r-cran-rmarkdown (2.28+dfsg-1) ... Setting up r-cran-projpred (2.8.0+dfsg-1) ... Setting up r-cran-pkgdown (2.0.7-2) ... Setting up python3-sklearn (1.4.2+dfsg-6) ... Setting up r-cran-conquer (1.3.3-1) ... Setting up r-cran-labelled (2.12.0-2) ... Setting up r-cran-vdiffr (1.0.7-1+b1) ... Setting up r-cran-r.rsp (0.46.0+ds-1) ... Setting up r-cran-dbitest (1.8.0-1) ... Setting up r-cran-popepi (0.4.12+dfsg-1) ... Setting up r-cran-forecast (8.23.0-1) ... Setting up r-cran-bookdown (0.40+dfsg-1) ... Setting up r-cran-reprex (2.1.0-1) ... Setting up r-cran-crosstalk (1.2.1+dfsg-1) ... Setting up r-cran-rio (1.2.2-1) ... Setting up r-cran-broom.mixed (0.2.9.5-1) ... Setting up r-cran-httptest2 (1.1.0+ds-2) ... Setting up r-cran-quantreg (5.98-1) ... Setting up r-cran-geepack (1.3.11.1-1) ... Setting up r-cran-shinythemes (1.2.0+dfsg-1) ... Setting up r-cran-kableextra (1.4.0+dfsg-1) ... Setting up python3-hmmlearn (0.3.0-5+b1) ... Setting up r-cran-modelr (0.1.11-1) ... Setting up r-cran-htmlwidgets (1.6.4+dfsg-1) ... Setting up r-cran-colourpicker (1.3.0+dfsg-1) ... Setting up r-cran-profvis (0.3.8+dfsg-1) ... Setting up r-cran-mice (3.16.0-1) ... Setting up r-cran-threejs (0.3.3+dfsg-2) ... Setting up r-cran-tufte (0.13-1) ... Setting up r-cran-broom.helpers (1.14.0-2) ... Setting up r-cran-rgl (1.3.1-1) ... Setting up r-cran-doby (4.6.22-2) ... Setting up r-bioc-biocstyle (2.32.1+dfsg-1) ... Setting up r-cran-formattable (0.2.1+dfsg-1) ... Setting up macs (3.0.2-1) ... Setting up r-cran-dt (0.33+dfsg-1) ... Setting up r-cran-ggstats (0.5.1-2) ... Setting up r-cran-devtools (2.4.5-1) ... Setting up r-cran-tidyverse (2.0.0+dfsg-1) ... Setting up r-cran-ggally (2.2.1-1) ... Setting up r-cran-dygraphs (1.1.1.6+dfsg-4) ... Setting up r-cran-htmltable (2.4.3-1) ... Setting up r-cran-pbkrtest (0.5.3-1) ... Setting up r-cran-car (3.1-2-3) ... Setting up r-cran-aer (1.2-12-1) ... Setting up r-cran-shinystan (2.6.0-1) ... Setting up r-cran-dynlm (0.3.6-2) ... Setting up r-cran-systemfit (1.1-30-1) ... Setting up r-cran-hmisc (5.1-3-1) ... Setting up r-cran-rstatix (0.7.2-1) ... Setting up r-cran-rstanarm (2.32.1-2) ... Setting up r-cran-afex (1.4-1-1) ... Setting up r-cran-ggpubr (0.6.0-1) ... Setting up r-cran-brms (2.20.4-1) ... Setting up r-cran-rms (6.8-2-1) ... Setting up r-cran-riskregression (2023.12.21+ds-1) ... Setting up r-cran-pec (2023.04.12-1) ... Setting up r-cran-pammtools (0.5.92-1) ... Setting up r-cran-relsurv (2.2-9-1) ... Setting up libheif-plugin-dav1d:amd64 (1.18.1-2) ... Setting up libheif-plugin-libde265:amd64 (1.18.1-2) ... Setting up libwww-perl (6.77-1) ... Setting up libheif1:amd64 (1.18.1-2) ... Setting up tasksel (3.75) ... Setting up libmagickcore-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ... Setting up ruby-rubygems (3.4.20-1) ... Setting up python3-fonttools (4.46.0-1+b1) ... Setting up libmagickwand-6.q16-7t64:amd64 (8:6.9.13.12+dfsg1-1) ... Setting up libguava-java (32.0.1-1) ... Setting up libapache2-mod-perl2 (2.0.13-1+b3) ... Setting up libgd3:amd64 (2.3.3-12) ... Setting up libapache2-reload-perl (0.14-1) ... Setting up libgvc6 (2.42.4-2) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up node-acorn (8.8.1+ds+~cs25.17.7-2) ... Setting up libbiojava1.9-java (1:1.9.7+dfsg-1) ... Setting up libmagick++-6.q16-9t64:amd64 (8:6.9.13.12+dfsg1-1) ... Setting up libbio-tools-run-remoteblast-perl (1.7.3-3) ... Setting up imagemagick-6.q16 (8:6.9.13.12+dfsg1-1) ... update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode Setting up libdevmapper1.02.1:amd64 (2:1.02.196-1+b1) ... Setting up libgdal35:amd64 (3.9.2+dfsg-1+b1) ... Setting up ruby3.1 (3.1.2-8.4) ... Setting up tasksel-data (3.75) ... Setting up dmsetup (2:1.02.196-1+b1) ... Setting up libcryptsetup12:amd64 (2:2.7.5-1) ... Setting up emboss-lib (6.6.0+dfsg-15) ... Setting up libmagickcore-6.q16-7-extra:amd64 (8:6.9.13.12+dfsg1-1) ... Setting up embassy-domsearch (1:0.1.660-4) ... Setting up raster3d (3.0-7-2+b1) ... Setting up ruby-sdbm:amd64 (1.0.0-5+b4) ... Setting up med-tasks (3.8.1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up graphviz (2.42.4-2) ... Setting up libg20 (0.72-12+b2) ... Setting up liberror-prone-java (2.18.0-1) ... Setting up libxml-parser-perl (2.47-1+b2) ... Setting up rnahybrid (2.1.2-8) ... Setting up libnode115:amd64 (20.17.0+dfsg-2) ... Setting up python3-matplotlib (3.8.3-3) ... Setting up libbiojava-java (1:1.9.7+dfsg-1) ... Setting up embassy-domalign (0.1.660-5) ... Setting up emboss (6.6.0+dfsg-15) ... Setting up libgraphicsmagick-q16-3t64 (1.4+really1.3.45-1) ... Setting up libheif-plugin-x265:amd64 (1.18.1-2) ... Setting up libheif-plugin-aomenc:amd64 (1.18.1-2) ... Setting up graphicsmagick (1.4+really1.3.45-1) ... Setting up libxml-twig-perl (1:3.52-3) ... Setting up libnet-dbus-perl (1.2.0-2+b2) ... Setting up r-cran-magick (2.8.3+dfsg-1) ... Setting up arden (1.0-5) ... Setting up nodejs (20.17.0+dfsg-2) ... update-alternatives: using /usr/bin/nodejs to provide /usr/bin/js (js) in auto mode Setting up libxml-xpath-perl (1.48-1) ... Setting up libbio-variation-perl (1.7.5-3) ... Setting up libapache-dbi-perl (1.12-3) ... Setting up libgd-perl (2.78-1+b2) ... Setting up ruby (1:3.1+nmu1) ... Setting up systemd-cryptsetup (256.6-1) ... Setting up embassy-domainatrix (0.1.660-5) ... Setting up rake (13.2.1-1) ... Setting up r-cran-terra (1.7-78-1) ... Setting up imagemagick (8:6.9.13.12+dfsg1-1) ... Setting up r-cran-v8 (4.4.2+dfsg-1+b1) ... Setting up libxml-sax-expat-perl (0.51-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::Expat with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-perl (0.08-4) ... Setting up libsoap-lite-perl (1.27-3) ... Setting up libgraphviz-perl (2.24-1) ... Setting up mipe (1.1-9) ... Setting up circos (0.69.9+dfsg-2) ... Setting up r-cran-qtl (1.70-1) ... Setting up libbio-cluster-perl (1.7.3-6) ... Setting up circos-tools (0.23-1) ... Setting up libxml-dom-perl (1.46-2) ... Setting up libbio-asn1-entrezgene-perl (1.730-3) ... Setting up libxml-dom-xpath-perl (0.14-4) ... Setting up libbio-eutilities-perl (1.77-2) ... Setting up r-cran-raster (3.6-26-1) ... Setting up libruby3.1t64:amd64 (3.1.2-8.4) ... Setting up libxmlrpc-lite-perl (0.717-5) ... Setting up libbio-featureio-perl (1.6.905-2) ... Setting up libruby:amd64 (1:3.1+nmu1) ... Processing triggers for libc-bin (2.40-2) ... Processing triggers for systemd (256.6-1) ... Processing triggers for base-files (13.5) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up docutils-common (0.21.2+dfsg-2) ... Setting up python3-biopython (1.83+dfsg1-5) ... Setting up python3-gffutils (0.13-1) ... Setting up gasic (0.0.r19-8) ... Processing triggers for ca-certificates-java (20240118) ... Adding debian:ACCVRAIZ1.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem Adding debian:ANF_Secure_Server_Root_CA.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:AffirmTrust_Networking.pem Adding debian:AffirmTrust_Premium.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:BJCA_Global_Root_CA1.pem Adding debian:BJCA_Global_Root_CA2.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:Certainly_Root_E1.pem Adding debian:Certainly_Root_R1.pem Adding debian:Certigna.pem Adding debian:Certigna_Root_CA.pem Adding debian:Certum_EC-384_CA.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certum_Trusted_Root_CA.pem Adding debian:CommScope_Public_Trust_ECC_Root-01.pem Adding debian:CommScope_Public_Trust_ECC_Root-02.pem Adding debian:CommScope_Public_Trust_RSA_Root-01.pem Adding debian:CommScope_Public_Trust_RSA_Root-02.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:D-TRUST_BR_Root_CA_1_2020.pem Adding debian:D-TRUST_EV_Root_CA_1_2020.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:DigiCert_Global_Root_G3.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:GLOBALTRUST_2020.pem Adding debian:GTS_Root_R1.pem Adding debian:GTS_Root_R2.pem Adding debian:GTS_Root_R3.pem Adding debian:GTS_Root_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:GlobalSign_Root_E46.pem Adding debian:GlobalSign_Root_R46.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:HiPKI_Root_CA_-_G1.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:ISRG_Root_X1.pem Adding debian:ISRG_Root_X2.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:Izenpe.com.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:QuoVadis_Root_CA_3.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem Adding debian:SecureSign_RootCA11.pem Adding debian:SecureTrust_CA.pem Adding debian:Secure_Global_CA.pem Adding debian:Security_Communication_ECC_RootCA1.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Security_Communication_RootCA3.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Telia_Root_CA_v2.pem Adding debian:TrustAsia_Global_Root_CA_G3.pem Adding debian:TrustAsia_Global_Root_CA_G4.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:TunTrust_Root_CA.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:vTrus_ECC_Root_CA.pem Adding debian:vTrus_Root_CA.pem done. Setting up openjdk-21-jre:amd64 (21.0.5~8ea-1) ... Setting up melting (5.2.0-2) ... Setting up openjdk-21-jdk-headless:amd64 (21.0.5~8ea-1) ... update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jar to provide /usr/bin/jar (jar) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javac to provide /usr/bin/javac (javac) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/javap to provide /usr/bin/javap (javap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jps to provide /usr/bin/jps (jps) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode update-alternatives: using /usr/lib/jvm/java-21-openjdk-amd64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode Setting up default-jre-headless (2:1.21-76) ... Setting up default-jre (2:1.21-76) ... Setting up picard-tools (3.1.1+dfsg-1) ... Setting up default-jdk-headless (2:1.21-76) ... Setting up bioperl-run (1.7.3-11) ... Setting up libbytecode-java (0.92.svn.20090106-2.1) ... Setting up fastqc (0.12.1+dfsg-4) ... Setting up alien-hunter (1.7-10) ... Setting up neobio (0.0.20030929-6) ... Processing triggers for menu (2.1.50) ... Setting up blends-common (0.7.7) ... Setting up med-config (3.8.1) ... info: Selecting GID from range 100 to 999 ... info: Adding group `med' (GID 153) ... Setting up med-cloud (3.8.1) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-pdb2pqr (3.6.1+dfsg-1) ... Setting up pdb2pqr (3.6.1+dfsg-1) ... Processing triggers for dictionaries-common (1.29.7) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Processing triggers for libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1) ... Processing triggers for ca-certificates-java (20240118) ... done. 7m41.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', '-y', 'install', 'med-cloud=3.8.1'] 7m41.8s INFO: Running scripts post_install 7m41.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_install_exceptions'] 7m41.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_install_exceptions'] 7m42.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 7m50.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 8m9.1s ERROR: WARN: Broken symlinks: /etc/vconsole.conf -> default/keyboard /etc/default/locale -> ../locale.conf /usr/lib/debian-med/bin/kget -> ../../../bin/vdb-get (sra-toolkit) /usr/lib/jvm/java-21-openjdk-amd64/lib/src.zip -> ../../openjdk-21/src.zip (openjdk-21-jdk-headless:amd64) /usr/share/bash-completion/completions/node -> nodejs (nodejs) 8m22.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', '-ac', '--ignore-obsolete'] 11m0.5s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', '-ac', '--ignore-obsolete'] 11m0.5s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 11m0.5s DUMP: 0.15.6 11m0.5s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 11m0.5s INFO: Running adequate version 0.15.6 now. 11m0.5s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'med-cloud'] 11m0.6s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'med-cloud'] 11m0.6s INFO: Running scripts pre_remove 11m0.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 11m0.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 11m0.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 11m0.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 11m0.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 12m52.6s DUMP: UNOWNED SYMLINK /usr/lib/ld-linux.so.2 -> ../lib32/ld-linux.so.2 UNOWNED SYMLINK /usr/lib/x86_64-linux-gnu/libmpi_usempi_ignore_tkr-gfortranso.40 -> libmpi_usempi_ignore_tkr-gfortran.so.40.30.0 12m52.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 12m52.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 12m53.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 12m53.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 12m53.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 12m53.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_exceptions'] 12m53.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/pre_remove_exceptions'] 12m53.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 12m53.9s DUMP: install ok installed abyss abyss 2.3.9-1 install ok installed adduser adduser 3.137 install ok installed adwaita-icon-theme adwaita-icon-theme 47.0-1 install ok installed aevol aevol 5.0+ds-3+b2 install ok installed alien-hunter alien-hunter 1.7-10 install ok installed alsa-topology-conf alsa-topology-conf 1.2.5.1-3 install ok installed alsa-ucm-conf alsa-ucm-conf 1.2.12-1 install ok installed altree altree 1.3.2-2+b3 install ok installed amap-align amap-align 2.2+git20080214.600fc29+dfsg-2 install ok installed apache2-bin apache2-bin 2.4.62-1 install ok installed apt apt 2.9.8 install ok installed aragorn aragorn 1.2.41-3 install ok installed arden arden 1.0-5 install ok installed at-spi2-common at-spi2-common 2.54.0-1 install ok installed at-spi2-core at-spi2-core 2.54.0-1 install ok installed autodock autodock 4.2.6-9 install ok installed autodock-vina autodock-vina 1.2.5-2 install ok installed autogrid autogrid 4.2.6-9 install ok installed bamtools bamtools 2.5.2+dfsg-6 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed bc bc 1.07.1-4 install ok installed bcalm bcalm 2.2.3-5+b1 install ok installed bcftools bcftools 1.20-2 install ok installed bedtools bedtools 2.31.1+dfsg-2 install ok installed binutils binutils 2.43.1-3 install ok installed binutils-common:amd64 binutils-common 2.43.1-3 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.43.1-3 install ok installed bioperl bioperl 1.7.8-1 install ok installed bioperl-run bioperl-run 1.7.3-11 install ok installed biosquid biosquid 1.9g+cvs20050121-15.1 install ok installed blends-common blends-common 0.7.7 install ok installed blt blt 2.5.3+dfsg-7 install ok installed bowtie bowtie 1.3.1-3 install ok installed bowtie2 bowtie2 2.5.4-1 install ok installed boxshade boxshade 3.3.1-14 install ok installed bsdextrautils bsdextrautils 2.40.2-8 install ok installed bsdutils bsdutils 1:2.40.2-8 install ok installed build-essential build-essential 12.10 install ok installed bwa bwa 0.7.18-1 install ok installed bzip2 bzip2 1.0.8-6 install ok installed bzip2-doc bzip2-doc 1.0.8-6 install ok installed ca-certificates ca-certificates 20240203 install ok installed ca-certificates-java ca-certificates-java 20240118 install ok installed cassiopee cassiopee 1.0.9-4+b1 install ok installed cd-hit cd-hit 4.8.1-4 install ok installed cdbfasta cdbfasta 1.00+git20230710.da8f5ba+dfsg-1 install ok installed circos circos 0.69.9+dfsg-2 install ok installed circos-tools circos-tools 0.23-1 install ok installed clearcut clearcut 1.0.9+git20211013.b799afe-1 install ok installed clonalframe clonalframe 1.2-11+b3 install ok installed clustalo clustalo 1.2.4-8 install ok installed clustalw clustalw 2.1+lgpl-7 install ok installed concavity concavity 0.1+dfsg.1-5 install ok installed conservation-code conservation-code 20110309.0-8 install ok installed coreutils coreutils 9.4-3.1 install ok installed cpp cpp 4:14.1.0-2 install ok installed cpp-14 cpp-14 14.2.0-3 install ok installed cpp-14-x86-64-linux-gnu cpp-14-x86-64-linux-gnu 14.2.0-3 install ok installed cpp-x86-64-linux-gnu cpp-x86-64-linux-gnu 4:14.1.0-2 install ok installed dash dash 0.5.12-9 install ok installed datamash datamash 1.8-1 install ok installed dbus dbus 1.14.10-4+b1 install ok installed dbus-bin dbus-bin 1.14.10-4+b1 install ok installed dbus-daemon dbus-daemon 1.14.10-4+b1 install ok installed dbus-session-bus-common dbus-session-bus-common 1.14.10-4 install ok installed dbus-system-bus-common dbus-system-bus-common 1.14.10-4 install ok installed dbus-user-session dbus-user-session 1.14.10-4+b1 install ok installed dconf-gsettings-backend:amd64 dconf-gsettings-backend 0.40.0-4+b2 install ok installed dconf-service dconf-service 0.40.0-4+b2 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed default-jdk-headless default-jdk-headless 2:1.21-76 install ok installed default-jre default-jre 2:1.21-76 install ok installed default-jre-headless default-jre-headless 2:1.21-76 install ok installed dialign dialign 2.2.1-13 install ok installed dialign-tx dialign-tx 1.0.2-15 install ok installed dialign-tx-data dialign-tx-data 1.0.2-15 install ok installed dictionaries-common dictionaries-common 1.29.7 install ok installed diffutils diffutils 1:3.10-1 install ok installed dirmngr dirmngr 2.2.43-8+b1 install ok installed discosnp discosnp 1:2.6.2-3+b1 install ok installed disulfinder disulfinder 1.2.11-12 install ok installed disulfinder-data disulfinder-data 1.2.11-12 install ok installed dmidecode dmidecode 3.6-1 install ok installed dmsetup dmsetup 2:1.02.196-1+b1 install ok installed dnaclust dnaclust 3-7+b3 install ok installed docutils-common docutils-common 0.21.2+dfsg-2 install ok installed dpkg dpkg 1.22.11 install ok installed dpkg-dev dpkg-dev 1.22.11 install ok installed dssp dssp 4.2.2-2 install ok installed dvisvgm dvisvgm 3.4.1+ds-1 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed emacsen-common emacsen-common 3.0.5 install ok installed embassy-domainatrix embassy-domainatrix 0.1.660-5 install ok installed embassy-domalign embassy-domalign 0.1.660-5 install ok installed embassy-domsearch embassy-domsearch 1:0.1.660-4 install ok installed emboss emboss 6.6.0+dfsg-15 install ok installed emboss-data emboss-data 6.6.0+dfsg-15 install ok installed emboss-lib emboss-lib 6.6.0+dfsg-15 install ok installed exonerate exonerate 2.4.0-5+b1 install ok installed fakeroot fakeroot 1.36-1 install ok installed fastdnaml fastdnaml 1.2.2-17 install ok installed fastlink fastlink 4.1P-fix100+dfsg-5 install ok installed fastqc fastqc 0.12.1+dfsg-4 install ok installed fasttree fasttree 2.1.11-2 install ok installed file file 1:5.45-3 install ok installed findutils findutils 4.10.0-3 install ok installed fitgcp fitgcp 0.0.20150429-5 install ok installed flexbar flexbar 1:3.5.0-5 install ok installed fontconfig fontconfig 2.15.0-1.1 install ok installed fontconfig-config fontconfig-config 2.15.0-1.1 install ok installed fonts-circos-symbols fonts-circos-symbols 0.69.9+dfsg-2 install ok installed fonts-cmu fonts-cmu 0.7.0-5 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-8 install ok installed fonts-dejavu-extra fonts-dejavu-extra 2.37-8 install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-8 install ok installed fonts-droid-fallback fonts-droid-fallback 1:6.0.1r16-1.1 install ok installed fonts-font-awesome fonts-font-awesome 5.0.10+really4.7.0~dfsg-4.1 install ok installed fonts-glyphicons-halflings fonts-glyphicons-halflings 1.009~3.4.1+dfsg-3 install ok installed fonts-lato fonts-lato 2.015-1 install ok installed fonts-liberation fonts-liberation 1:2.1.5-3 install ok installed fonts-liberation-sans-narrow fonts-liberation-sans-narrow 1:1.07.6-4 install ok installed fonts-lmodern fonts-lmodern 2.005-1 install ok installed fonts-lyx fonts-lyx 2.4.1-2 install ok installed fonts-mathjax 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java-wrappers 0.5 install ok installed javascript-common javascript-common 11+nmu1 install ok installed jellyfish jellyfish 2.3.1-3+b5 install ok installed kalign kalign 1:3.4.0-1+b1 install ok installed kissplice kissplice 2.6.7-1 install ok installed krb5-locales krb5-locales 1.21.3-3 install ok installed lagan lagan 2.0-10 install ok installed laptop-detect laptop-detect 0.16 install ok installed last-align last-align 1542-1+b1 install ok installed lib32gcc-s1 lib32gcc-s1 14.2.0-3 install ok installed lib32stdc++6 lib32stdc++6 14.2.0-3 install ok installed libaacs0:amd64 libaacs0 0.11.1-4 install ok installed libabsl20230802:amd64 libabsl20230802 20230802.1-4 install ok installed libace-perl libace-perl 1.92-12 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libaec0:amd64 libaec0 1.1.3-1 install ok installed libalgorithm-diff-perl libalgorithm-diff-perl 1.201-1 install ok installed libalgorithm-diff-xs-perl:amd64 libalgorithm-diff-xs-perl 0.04-8+b3 install ok installed libalgorithm-merge-perl libalgorithm-merge-perl 0.08-5 install ok installed libalgorithm-munkres-perl libalgorithm-munkres-perl 0.08-5 install ok installed libamd-comgr2:amd64 libamd-comgr2 6.0+git20231212.4510c28+dfsg-3+b1 install ok installed libamd3:amd64 libamd3 1:7.8.2+dfsg-2 install ok installed libamdhip64-5 libamdhip64-5 5.7.1-3 install ok installed libann0 libann0 1.1.2+doc-9+b1 install ok installed libaom3:amd64 libaom3 3.9.1-1 install ok installed libapache-dbi-perl libapache-dbi-perl 1.12-3 install ok installed libapache-pom-java libapache-pom-java 29-2 install ok installed libapache2-mod-perl2 libapache2-mod-perl2 2.0.13-1+b3 install ok installed libapache2-reload-perl libapache2-reload-perl 0.14-1 install ok installed libapparmor1:amd64 libapparmor1 3.1.7-1+b1 install ok installed libapr1t64:amd64 libapr1t64 1.7.5-1 install ok installed libaprutil1-dbd-sqlite3:amd64 libaprutil1-dbd-sqlite3 1.6.3-3 install ok installed libaprutil1-ldap:amd64 libaprutil1-ldap 1.6.3-3 install ok installed libaprutil1t64:amd64 libaprutil1t64 1.6.3-3 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libargtable2-0 libargtable2-0 13-2 install ok installed libarmadillo14 libarmadillo14 1:14.0.1+dfsg-2 install ok installed libarpack2t64:amd64 libarpack2t64 3.9.1-1.1+b2 install ok installed libarray-compare-perl libarray-compare-perl 3.0.8-1 install ok installed libasan8:amd64 libasan8 14.2.0-3 install ok installed libasound2-data libasound2-data 1.2.12-1 install ok installed libasound2t64:amd64 libasound2t64 1.2.12-1 install ok installed libass9:amd64 libass9 1:0.17.3-1 install ok installed libassuan9:amd64 libassuan9 3.0.1-2 install ok installed libasyncns0:amd64 libasyncns0 0.8-6+b4 install ok installed libatinject-jsr330-api-java libatinject-jsr330-api-java 1.0+ds1-5 install ok installed libatk-bridge2.0-0t64:amd64 libatk-bridge2.0-0t64 2.54.0-1 install ok installed libatk-wrapper-java libatk-wrapper-java 0.40.0-3 install ok installed libatk-wrapper-java-jni:amd64 libatk-wrapper-java-jni 0.40.0-3+b2 install ok installed libatk1.0-0t64:amd64 libatk1.0-0t64 2.54.0-1 install ok installed libatomic1:amd64 libatomic1 14.2.0-3 install ok installed libatspi2.0-0t64:amd64 libatspi2.0-0t64 2.54.0-1 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libauthen-sasl-perl libauthen-sasl-perl 2.1700-1 install ok installed libavahi-client3:amd64 libavahi-client3 0.8-13+b2 install ok installed libavahi-common-data:amd64 libavahi-common-data 0.8-13+b2 install ok installed libavahi-common3:amd64 libavahi-common3 0.8-13+b2 install ok installed libavcodec61:amd64 libavcodec61 7:7.0.2-3 install ok installed libavfilter10:amd64 libavfilter10 7:7.0.2-3 install ok installed libavformat61:amd64 libavformat61 7:7.0.2-3 install ok installed libavif16:amd64 libavif16 1.1.0-3 install ok 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libboost-program-options1.83.0:amd64 libboost-program-options1.83.0 1.83.0-3.2 install ok installed libboost-serialization1.83.0:amd64 libboost-serialization1.83.0 1.83.0-3.2 install ok installed libboost-thread1.83.0:amd64 libboost-thread1.83.0 1.83.0-3.2 install ok installed libboost1.83-dev:amd64 libboost1.83-dev 1.83.0-3.2 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b4 install ok installed libbs2b0:amd64 libbs2b0 3.1.0+dfsg-8 install ok installed libbsd-resource-perl libbsd-resource-perl 1.2911-2+b3 install ok installed libbsd0:amd64 libbsd0 0.12.2-1 install ok installed libbytecode-java libbytecode-java 0.92.svn.20090106-2.1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libbz2-dev:amd64 libbz2-dev 1.0.8-6 install ok installed libc-bin libc-bin 2.40-2 install ok installed libc-dev-bin libc-dev-bin 2.40-2 install ok installed libc6:amd64 libc6 2.40-2 install ok installed libc6-dev:amd64 libc6-dev 2.40-2 install ok installed libc6-i386 libc6-i386 2.40-2 install ok installed libcache-cache-perl libcache-cache-perl 1.08-3 install ok installed libcairo-gobject2:amd64 libcairo-gobject2 1.18.2-1 install ok installed libcairo2:amd64 libcairo2 1.18.2-1 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcapture-tiny-perl libcapture-tiny-perl 0.48-2 install ok installed libcares2:amd64 libcares2 1.33.1-1 install ok installed libcarp-always-perl libcarp-always-perl 0.16-1 install ok installed libcarp-clan-perl libcarp-clan-perl 6.08-2 install ok installed libcassie1v5 libcassie1v5 1.0.9-4+b1 install ok installed libcbor0.10:amd64 libcbor0.10 0.10.2-2 install ok installed libcc1-0:amd64 libcc1-0 14.2.0-3 install ok installed libcdt5:amd64 libcdt5 2.42.4-2 install ok installed libcfitsio10t64:amd64 libcfitsio10t64 4.4.1-2 install ok installed libcgi-fast-perl libcgi-fast-perl 1:2.17-1 install ok installed libcgi-pm-perl libcgi-pm-perl 4.66-1 install ok installed libcgraph6:amd64 libcgraph6 2.42.4-2 install ok installed libchromaprint1:amd64 libchromaprint1 1.5.1-6 install ok installed libcifpp-data libcifpp-data 5.0.7.1-3 install ok installed libcifpp5:amd64 libcifpp5 5.0.7.1-3+b1 install ok installed libcjson1:amd64 libcjson1 1.7.18-3 install ok installed libclang-common-18-dev:amd64 libclang-common-18-dev 1:18.1.8-11 install ok installed libclang-cpp18 libclang-cpp18 1:18.1.8-11 install ok installed libclang-rt-18-dev:amd64 libclang-rt-18-dev 1:18.1.8-11 install ok installed libclass-data-inheritable-perl libclass-data-inheritable-perl 0.08-3 install ok installed libclass-inspector-perl libclass-inspector-perl 1.36-3 install ok installed libclass-method-modifiers-perl libclass-method-modifiers-perl 2.15-1 install ok installed libclass-xsaccessor-perl libclass-xsaccessor-perl 1.19-4+b3 install ok installed libclc-18 libclc-18 1:18.1.8-11 install ok installed libclc-18-dev libclc-18-dev 1:18.1.8-11 install ok installed libclone-perl:amd64 libclone-perl 0.47-1 install ok installed libcloudproviders0:amd64 libcloudproviders0 0.3.6-1 install ok installed libcodec2-1.2:amd64 libcodec2-1.2 1.2.0-2+b1 install ok installed libcolamd3:amd64 libcolamd3 1:7.8.2+dfsg-2 install ok installed libcolord2:amd64 libcolord2 1.4.7-1+b1 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcommons-cli-java libcommons-cli-java 1.6.0-1 install ok installed libcommons-codec-java libcommons-codec-java 1.16.0-1 install ok installed libcommons-collections3-java libcommons-collections3-java 3.2.2-3 install ok installed libcommons-compress-java libcommons-compress-java 1.25.0-1 install ok installed libcommons-dbcp-java libcommons-dbcp-java 1.4-8 install ok installed libcommons-io-java libcommons-io-java 2.16.1-1 install ok installed libcommons-jexl2-java libcommons-jexl2-java 2.1.1-6 install ok installed libcommons-lang3-java libcommons-lang3-java 3.14.0-1 install ok installed libcommons-logging-java libcommons-logging-java 1.3.0-1 install ok installed libcommons-math3-java libcommons-math3-java 3.6.1-3 install ok installed libcommons-parent-java libcommons-parent-java 56-1 install ok installed libcommons-pool-java libcommons-pool-java 1.6-5 install ok installed libconfig-general-perl libconfig-general-perl 2.65-2 install ok installed libconvert-binary-c-perl libconvert-binary-c-perl 0.84-1+b4 install ok installed libconvert-binhex-perl libconvert-binhex-perl 1.125-3 install ok installed libcppunit-1.15-0:amd64 libcppunit-1.15-0 1.15.1-4+b1 install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.36-5 install ok installed libcrypt-rc4-perl libcrypt-rc4-perl 2.02-5 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libcryptsetup12:amd64 libcryptsetup12 2:2.7.5-1 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.43.1-3 install ok installed libctf0:amd64 libctf0 2.43.1-3 install ok installed libcups2t64:amd64 libcups2t64 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installed libdpkg-perl libdpkg-perl 1.22.11 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.123-1 install ok installed libdrm-common libdrm-common 2.4.123-1 install ok installed libdrm-intel1:amd64 libdrm-intel1 2.4.123-1 install ok installed libdrm-radeon1:amd64 libdrm-radeon1 2.4.123-1 install ok installed libdrm2:amd64 libdrm2 2.4.123-1 install ok installed libdvdnav4:amd64 libdvdnav4 6.1.1-3 install ok installed libdvdread8t64:amd64 libdvdread8t64 6.1.3-1.1 install ok installed libdynaloader-functions-perl libdynaloader-functions-perl 0.004-1 install ok installed libedit2:amd64 libedit2 3.1-20240808-1 install ok installed libegl-mesa0:amd64 libegl-mesa0 24.2.2-1 install ok installed libegl1:amd64 libegl1 1.7.0-1+b1 install ok installed libelf1t64:amd64 libelf1t64 0.191-2 install ok installed libencode-locale-perl libencode-locale-perl 1.05-3 install ok installed libencode-perl:amd64 libencode-perl 3.21-1+b1 install ok installed libepoxy0:amd64 libepoxy0 1.5.10-1+b2 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libglx-mesa0:amd64 libglx-mesa0 24.2.2-1 install ok installed libglx0:amd64 libglx0 1.7.0-1+b1 install ok installed libgme0:amd64 libgme0 0.6.3-7+b1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgomp1:amd64 libgomp1 14.2.0-3 install ok installed libgoogle-glog0v6t64 libgoogle-glog0v6t64 0.6.0-2.1 install ok installed libgoogle-gson-java libgoogle-gson-java 2.10.1-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libgpm2:amd64 libgpm2 1.20.7-11 install ok installed libgprofng0:amd64 libgprofng0 2.43.1-3 install ok installed libgraph-perl libgraph-perl 1:0.9729-1 install ok installed libgraphics-colornames-perl libgraphics-colornames-perl 3.5.0-3.1 install ok installed libgraphics-colorobject-perl libgraphics-colorobject-perl 0.5.0-10.1 install ok installed libgraphicsmagick-q16-3t64 libgraphicsmagick-q16-3t64 1.4+really1.3.45-1 install ok installed 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installed libgumbo2:amd64 libgumbo2 0.12.0+dfsg-2+b1 install ok installed libgvc6 libgvc6 2.42.4-2 install ok installed libgvpr2:amd64 libgvpr2 2.42.4-2 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 9.0.0-1 install ok installed libhdf4-0-alt:amd64 libhdf4-0-alt 4.3.0-1 install ok installed libhdf5-103-1t64:amd64 libhdf5-103-1t64 1.10.10+repack-4 install ok installed libhdf5-hl-100t64:amd64 libhdf5-hl-100t64 1.10.10+repack-4 install ok installed libheap-perl libheap-perl 0.80-5 install ok installed libheif-plugin-aomenc:amd64 libheif-plugin-aomenc 1.18.1-2 install ok installed libheif-plugin-dav1d:amd64 libheif-plugin-dav1d 1.18.1-2 install ok installed libheif-plugin-libde265:amd64 libheif-plugin-libde265 1.18.1-2 install ok installed libheif-plugin-x265:amd64 libheif-plugin-x265 1.18.1-2 install ok installed libheif1:amd64 libheif1 1.18.1-2 install ok installed libhmsbeagle1v5:amd64 libhmsbeagle1v5 3.1.2+dfsg-13+b1 install ok installed libhogweed6t64:amd64 libhogweed6t64 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libhttp-date-perl 6.06-1 install ok installed libhttp-message-perl libhttp-message-perl 6.46-1 install ok installed libhttp-negotiate-perl libhttp-negotiate-perl 6.01-2 install ok installed libhttp-parser2.9:amd64 libhttp-parser2.9 2.9.4-6+b1 install ok installed libhttpclient-java libhttpclient-java 4.5.14-1 install ok installed libhttpcore-java libhttpcore-java 4.4.16-1 install ok installed libhunspell-1.7-0:amd64 libhunspell-1.7-0 1.7.2+really1.7.2-10+b2 install ok installed libhwasan0:amd64 libhwasan0 14.2.0-3 install ok installed libhwloc-plugins:amd64 libhwloc-plugins 2.11.0-2 install ok installed libhwloc15:amd64 libhwloc15 2.11.0-2 install ok installed libhwy1t64:amd64 libhwy1t64 1.2.0-2 install ok installed libibmad5:amd64 libibmad5 52.0-2 install ok installed libibumad3:amd64 libibumad3 52.0-2 install ok installed libibverbs1:amd64 libibverbs1 52.0-2 install ok installed libice6:amd64 libice6 2:1.0.10-1+b1 install ok installed libicu-dev:amd64 libicu-dev 72.1-5 install ok 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installed libjs-json libjs-json 0~20221030+~1.0.8-1 install ok installed libjs-lunr libjs-lunr 2.3.9~dfsg-2 install ok installed libjs-mathjax libjs-mathjax 2.7.9+dfsg-1 install ok installed libjs-microplugin.js libjs-microplugin.js 0.0.3+dfsg-1.1 install ok installed libjs-modernizr libjs-modernizr 3.13.0-0.1 install ok installed libjs-popper.js libjs-popper.js 1.16.1+ds-6 install ok installed libjs-prettify libjs-prettify 2015.12.04+dfsg-1.1 install ok installed libjs-remark-slide libjs-remark-slide 0.15.0+ds-2 install ok installed libjs-sifter.js libjs-sifter.js 0.6.0+dfsg-3 install ok installed libjs-sizzle libjs-sizzle 2.3.10+ds+~2.3.6-1 install ok installed libjs-twitter-bootstrap-datepicker libjs-twitter-bootstrap-datepicker 1.3.1+dfsg1-4.1 install ok installed libjs-underscore libjs-underscore 1.13.4~dfsg+~1.11.4-3 install ok installed libjson-c5:amd64 libjson-c5 0.18+ds-1 install ok installed libjsoncpp25:amd64 libjsoncpp25 1.9.5-6+b2 install ok installed libjsr305-java 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install ok installed libmath-spline-perl libmath-spline-perl 0.02-4 install ok installed libmath-tamuanova-perl libmath-tamuanova-perl 1.0.2-4+b1 install ok installed libmath-vec-perl libmath-vec-perl 1.01-5 install ok installed libmath-vecstat-perl libmath-vecstat-perl 0.08-3 install ok installed libmbedcrypto7t64:amd64 libmbedcrypto7t64 2.28.8-1 install ok installed libmbedtls14t64:amd64 libmbedtls14t64 2.28.8-1 install ok installed libmbedx509-1t64:amd64 libmbedx509-1t64 2.28.8-1 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmime-tools-perl libmime-tools-perl 5.515-1 install ok installed libminizip1t64:amd64 libminizip1t64 1:1.3.dfsg+really1.3.1-1 install ok installed libmjson-java libmjson-java 1.4.0-3 install ok installed libmldbm-perl libmldbm-perl 2.05-4 install ok installed libmodule-implementation-perl libmodule-implementation-perl 0.09-2 install ok installed libmodule-runtime-perl libmodule-runtime-perl 0.016-2 install ok installed libmongodb-java libmongodb-java 3.6.3-2 install ok installed libmoo-perl libmoo-perl 2.005005-1 install ok installed libmount1:amd64 libmount1 2.40.2-8 install ok installed libmp3lame0:amd64 libmp3lame0 3.100-6+b2 install ok installed libmpc3:amd64 libmpc3 1.3.1-1+b2 install ok installed libmpfi0:amd64 libmpfi0 1.5.4+ds-3 install ok installed libmpfr6:amd64 libmpfr6 4.2.1-1+b1 install ok installed libmpg123-0t64:amd64 libmpg123-0t64 1.32.7-1 install ok installed libmujs3:amd64 libmujs3 1.3.3-3+b2 install ok installed libmunge2:amd64 libmunge2 0.5.15-4 install ok installed libmuparser2v5:amd64 libmuparser2v5 2.3.4-1 install ok installed libmysofa1:amd64 libmysofa1 1.3.2+dfsg-2+b1 install ok installed libnamespace-clean-perl libnamespace-clean-perl 0.27-2 install ok installed libncbi-ngs3:amd64 libncbi-ngs3 3.0.3+dfsg-9 install ok installed libncbi-vdb3:amd64 libncbi-vdb3 3.0.2+dfsg-2+b1 install ok installed libncbi-wvdb3:amd64 libncbi-wvdb3 3.0.2+dfsg-2+b1 install ok installed libncbi6t64:amd64 libncbi6t64 6.1.20170106+dfsg2-4 install ok installed libncurses-dev:amd64 libncurses-dev 6.5-2 install ok installed libncurses6:amd64 libncurses6 6.5-2 install ok installed libncursesw6:amd64 libncursesw6 6.5-2 install ok installed libnet-dbus-perl libnet-dbus-perl 1.2.0-2+b2 install ok installed libnet-http-perl libnet-http-perl 6.23-1 install ok installed libnet-smtp-ssl-perl libnet-smtp-ssl-perl 1.04-2 install ok installed libnet-ssleay-perl:amd64 libnet-ssleay-perl 1.94-1+b1 install ok installed libnetcdf19t64:amd64 libnetcdf19t64 1:4.9.2-7 install ok installed libnetpbm11t64:amd64 libnetpbm11t64 2:11.07.00-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.63.0-1 install ok installed libnghttp3-9:amd64 libnghttp3-9 1.4.0-1 install ok installed libngs-java:amd64 libngs-java 3.0.3+dfsg-9 install ok installed libngs-jni:amd64 libngs-jni 3.0.3+dfsg-9 install ok installed libngtcp2-16:amd64 libngtcp2-16 1.6.0-1 install ok installed libngtcp2-crypto-gnutls8:amd64 libngtcp2-crypto-gnutls8 1.6.0-1 install ok installed libnl-3-200:amd64 libnl-3-200 3.7.0-0.3 install ok installed libnl-route-3-200:amd64 libnl-route-3-200 3.7.0-0.3 install ok installed libnlopt0:amd64 libnlopt0 2.7.1-5+b4 install ok installed libnode115:amd64 libnode115 20.17.0+dfsg-2 install ok installed libnorm1t64:amd64 libnorm1t64 1.5.9+dfsg-3.1 install ok installed libnpth0t64:amd64 libnpth0t64 1.6-3.1 install ok installed libnsl2:amd64 libnsl2 1.3.0-3+b2 install ok installed libnspr4:amd64 libnspr4 2:4.35-1.1+b1 install ok installed libnss-systemd:amd64 libnss-systemd 256.6-1 install ok installed libnss3:amd64 libnss3 2:3.103-1 install ok installed libnuma1:amd64 libnuma1 2.0.18-1 install ok installed libnumber-format-perl libnumber-format-perl 1.76-1 install ok installed libodbc2:amd64 libodbc2 2.3.12-1+b2 install ok installed libodbcinst2:amd64 libodbcinst2 2.3.12-1+b2 install ok installed libogdi4.1:amd64 libogdi4.1 4.1.1+ds-4 install ok installed libogg0:amd64 libogg0 1.3.5-3+b1 install ok installed libole-storage-lite-perl libole-storage-lite-perl 0.22-1 install ok installed libopenblas0:amd64 libopenblas0 0.3.28+ds-2 install ok installed libopenblas0-pthread:amd64 libopenblas0-pthread 0.3.28+ds-2 install ok installed libopenexr-3-1-30:amd64 libopenexr-3-1-30 3.1.5-5.1+b2 install ok installed libopengl0:amd64 libopengl0 1.7.0-1+b1 install ok installed libopenjp2-7:amd64 libopenjp2-7 2.5.0-2+b3 install ok installed libopenmpi3t64:amd64 libopenmpi3t64 4.1.6-13.3 install ok installed libopenmpt0t64:amd64 libopenmpt0t64 0.7.9-1 install ok installed libopus0:amd64 libopus0 1.5.2-2 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpackage-stash-perl libpackage-stash-perl 0.40-1 install ok installed libpackage-stash-xs-perl:amd64 libpackage-stash-xs-perl 0.30-1+b3 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam-systemd:amd64 libpam-systemd 256.6-1 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpango-1.0-0:amd64 libpango-1.0-0 1.54.0+ds-2 install ok installed libpangocairo-1.0-0:amd64 libpangocairo-1.0-0 1.54.0+ds-2 install ok installed libpangoft2-1.0-0:amd64 libpangoft2-1.0-0 1.54.0+ds-2 install ok installed libpaper-utils libpaper-utils 1.1.29+b1 install ok installed libpaper1:amd64 libpaper1 1.1.29+b1 install ok installed libparams-classify-perl:amd64 libparams-classify-perl 0.015-2+b3 install ok installed libparams-validate-perl:amd64 libparams-validate-perl 1.31-2+b2 install ok installed libparse-recdescent-perl libparse-recdescent-perl 1.967015+dfsg-4 install ok installed libpathplan4:amd64 libpathplan4 2.42.4-2 install ok installed libpciaccess0:amd64 libpciaccess0 0.17-3+b1 install ok installed libpcre2-16-0:amd64 libpcre2-16-0 10.42-4+b1 install ok installed libpcre2-32-0:amd64 libpcre2-32-0 10.42-4+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libpcre2-dev:amd64 libpcre2-dev 10.42-4+b1 install ok installed libpcre2-posix3:amd64 libpcre2-posix3 10.42-4+b1 install ok installed libpcsclite1:amd64 libpcsclite1 2.3.0-1 install ok installed libperl4-corelibs-perl libperl4-corelibs-perl 0.005-1 install ok installed libperl5.38t64:amd64 libperl5.38t64 5.38.2-5 install ok installed libpgm-5.3-0t64:amd64 libpgm-5.3-0t64 5.3.128~dfsg-2.1 install ok installed libpicard-java libpicard-java 3.1.1+dfsg-1 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.42.2-1+b1 install ok installed libpkgconf3:amd64 libpkgconf3 1.8.1-3 install ok installed libplacebo349:amd64 libplacebo349 7.349.0-2 install ok installed libpmix2t64:amd64 libpmix2t64 5.0.3-2 install ok installed libpng-dev:amd64 libpng-dev 1.6.44-1 install ok installed libpng-tools libpng-tools 1.6.44-1 install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.44-1 install ok installed libpocketsphinx3:amd64 libpocketsphinx3 0.8+5prealpha+1-15+b3 install ok installed libpod-coverage-perl libpod-coverage-perl 0.23-2 install ok installed libpod-parser-perl libpod-parser-perl 1.67-1 install ok installed libpoppler-cpp1:amd64 libpoppler-cpp1 24.08.0-2 install ok installed libpoppler140:amd64 libpoppler140 24.08.0-2 install ok installed libpostproc58:amd64 libpostproc58 7:7.0.2-3 install ok installed libpostscript-perl libpostscript-perl 0.06-3.1 install ok installed libpotrace0:amd64 libpotrace0 1.16-2+b1 install ok installed libpq5:amd64 libpq5 17~rc1-1 install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-5 install ok installed libproj25:amd64 libproj25 9.5.0-1 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.2-1.1 install ok installed libpsm-infinipath1 libpsm-infinipath1 3.3+20.604758e7-6.3 install ok installed libpsm2-2 libpsm2-2 11.2.185-2.1 install ok installed libptexenc1:amd64 libptexenc1 2024.20240313.70630+ds-4 install ok installed libpulse0:amd64 libpulse0 16.1+dfsg1-5.1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.12.5-1+b1 install ok installed libpython3.12-minimal:amd64 libpython3.12-minimal 3.12.6-1 install ok installed libpython3.12-stdlib:amd64 libpython3.12-stdlib 3.12.6-1 install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-6+b1 install ok installed libqpdf29t64:amd64 libqpdf29t64 11.9.1-1 install ok installed libquadmath0:amd64 libquadmath0 14.2.0-3 install ok installed librabbitmq4:amd64 librabbitmq4 0.14.0-1 install ok installed libraqm0:amd64 libraqm0 0.10.1-1+b1 install ok installed librav1e0.7:amd64 librav1e0.7 0.7.1-7+b1 install ok installed libraw23t64:amd64 libraw23t64 0.21.2-2.1 install ok installed librdmacm1t64:amd64 librdmacm1t64 52.0-2 install ok installed libre2-11:amd64 libre2-11 20240501-3 install ok installed libreadline-dev:amd64 libreadline-dev 8.2-5 install ok installed libreadline8t64:amd64 libreadline8t64 8.2-5 install ok installed libreadonly-perl libreadonly-perl 2.050-3 install ok installed libref-util-perl libref-util-perl 0.204-2 install ok installed libref-util-xs-perl libref-util-xs-perl 0.117-2+b3 install ok installed libregexp-common-perl libregexp-common-perl 2024080801-1 install ok installed librhino-java librhino-java 1.7.14-2.1 install ok installed librist4:amd64 librist4 0.2.10+dfsg-2 install ok installed librole-tiny-perl librole-tiny-perl 2.002004-1 install ok installed librsvg2-2:amd64 librsvg2-2 2.59.0+dfsg-3 install ok installed librsvg2-common:amd64 librsvg2-common 2.59.0+dfsg-3 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b4 install ok installed librttopo1:amd64 librttopo1 1.1.0-3+b1 install ok installed librubberband2:amd64 librubberband2 3.3.0+dfsg-2+b2 install ok installed libruby:amd64 libruby 1:3.1+nmu1 install ok installed libruby3.1t64:amd64 libruby3.1t64 3.1.2-8.4 install ok installed libsamplerate0:amd64 libsamplerate0 0.2.2-4+b1 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-8 install ok installed libsasl2-modules:amd64 libsasl2-modules 2.1.28+dfsg1-8 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-8 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsensors-config libsensors-config 1:3.6.0-10 install ok installed libsensors5:amd64 libsensors5 1:3.6.0-10 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libserd-0-0:amd64 libserd-0-0 0.32.2-1 install ok installed libset-intspan-perl libset-intspan-perl 1.19-3 install ok installed libset-object-perl libset-object-perl 1.42-1+b4 install ok installed libset-scalar-perl libset-scalar-perl 1.29-3 install ok installed libsframe1:amd64 libsframe1 2.43.1-3 install ok installed libsharpyuv0:amd64 libsharpyuv0 1.4.0-0.1 install ok installed libshine3:amd64 libshine3 3.1.1-2+b1 install ok installed libsigsegv2:amd64 libsigsegv2 2.14-1+b1 install ok installed libslf4j-java libslf4j-java 1.7.32-1 install ok installed libsm6:amd64 libsm6 2:1.2.3-1+b1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-8 install ok installed libsnappy-java libsnappy-java 1.1.10.5-2 install ok installed libsnappy-jni libsnappy-jni 1.1.10.5-2 install ok installed libsnappy1v5:amd64 libsnappy1v5 1.2.1-1 install ok installed libsndfile1:amd64 libsndfile1 1.2.2-1+b2 install ok installed libsoap-lite-perl libsoap-lite-perl 1.27-3 install ok installed libsodium23:amd64 libsodium23 1.0.18-1+b1 install ok installed libsord-0-0:amd64 libsord-0-0 0.16.16-2+b1 install ok installed libsort-naturally-perl libsort-naturally-perl 1.03-4 install ok installed libsoxr0:amd64 libsoxr0 0.1.3-4+b1 install ok installed libspatialite8t64:amd64 libspatialite8t64 5.1.0-3+b1 install ok installed libspeex1:amd64 libspeex1 1.2.1-2+b1 install ok installed libsphinxbase3t64:amd64 libsphinxbase3t64 0.8+5prealpha+1-18 install ok installed libspiffy-perl libspiffy-perl 0.46-1 install ok installed libspreadsheet-parseexcel-perl libspreadsheet-parseexcel-perl 0.6600-1 install ok installed libspreadsheet-writeexcel-perl libspreadsheet-writeexcel-perl 2.40-4 install ok installed libsprng2 libsprng2 2.0a-16 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.0-1 install ok installed libsquid1t64:amd64 libsquid1t64 1.9g+cvs20050121-15.1 install ok installed libsquizz libsquizz 0.99d+dfsg-3 install ok installed libsratom-0-0:amd64 libsratom-0-0 0.6.16-1+b1 install ok installed libsrt1.5-gnutls:amd64 libsrt1.5-gnutls 1.5.3-1+b2 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssh-4:amd64 libssh-4 0.11.1-1 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.0-7 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstaden-read14t64:amd64 libstaden-read14t64 1.15.0-1.1+b1 install ok installed libstatistics-basic-perl libstatistics-basic-perl 1.6611-3 install ok installed libstatistics-descriptive-perl libstatistics-descriptive-perl 3.0801-1 install ok installed libstdc++-14-dev:amd64 libstdc++-14-dev 14.2.0-3 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-3 install ok installed libsub-exporter-progressive-perl libsub-exporter-progressive-perl 0.001013-3 install ok installed libsub-identify-perl libsub-identify-perl 0.14-3+b2 install ok installed libsub-name-perl:amd64 libsub-name-perl 0.27-1+b2 install ok installed libsub-quote-perl libsub-quote-perl 2.006008-1 install ok installed libsub-uplevel-perl libsub-uplevel-perl 0.2800-3 install ok installed libsuitesparseconfig7:amd64 libsuitesparseconfig7 1:7.8.2+dfsg-2 install ok installed libsuperlu6:amd64 libsuperlu6 6.0.1+dfsg1-1+b1 install ok installed libsvg-graph-perl libsvg-graph-perl 0.02-4 install ok installed libsvg-perl libsvg-perl 2.87-1 install ok installed libsvtav1enc2:amd64 libsvtav1enc2 2.1.0+dfsg-2 install ok installed libswresample5:amd64 libswresample5 7:7.0.2-3 install ok installed libswscale8:amd64 libswscale8 7:7.0.2-3 install ok installed libsynctex2:amd64 libsynctex2 2024.20240313.70630+ds-4 install ok installed libsystemd-shared:amd64 libsystemd-shared 256.6-1 install ok installed libsystemd0:amd64 libsystemd0 256.6-1 install ok installed libsz2:amd64 libsz2 1.1.3-1 install ok installed libtamuanova-0.2 libtamuanova-0.2 0.2-5+b3 install ok installed libtask-weaken-perl libtask-weaken-perl 1.06-2 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtbb-dev:amd64 libtbb-dev 2021.12.0-1 install ok installed libtbb12:amd64 libtbb12 2021.12.0-1 install ok installed libtbbbind-2-5:amd64 libtbbbind-2-5 2021.12.0-1 install ok installed libtbbmalloc2:amd64 libtbbmalloc2 2021.12.0-1 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.14+dfsg-1 install ok installed libteckit0:amd64 libteckit0 2.5.12+ds1-1 install ok installed libtest-deep-perl libtest-deep-perl 1.204-1 install ok installed libtest-differences-perl libtest-differences-perl 0.71-1 install ok installed libtest-exception-perl libtest-exception-perl 0.43-3 install ok installed libtest-most-perl libtest-most-perl 0.38-1 install ok installed libtest-pod-perl libtest-pod-perl 1.52-3 install ok installed libtest-requiresinternet-perl libtest-requiresinternet-perl 0.05-4 install ok installed libtest-warn-perl libtest-warn-perl 0.37-2 install ok installed libtexlua53-5:amd64 libtexlua53-5 2024.20240313.70630+ds-4 install ok installed libtext-csv-perl libtext-csv-perl 2.04-1 install ok installed libtext-csv-xs-perl:amd64 libtext-csv-xs-perl 1.56-1 install ok installed libtext-diff-perl libtext-diff-perl 1.45-2 install ok installed libtext-format-perl libtext-format-perl 0.63-1 install ok installed libtext-iconv-perl:amd64 libtext-iconv-perl 1.7-8+b3 install ok installed libthai-data libthai-data 0.1.29-2 install ok installed libthai0:amd64 libthai0 0.1.29-2 install ok installed libtheora0:amd64 libtheora0 1.1.1+dfsg.1-17 install ok installed libtie-ixhash-perl libtie-ixhash-perl 1.23-4 install ok installed libtiff6:amd64 libtiff6 4.5.1+git230720-5 install ok installed libtimedate-perl libtimedate-perl 2.3300-2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libtirpc-common libtirpc-common 1.3.4+ds-1.3 install ok installed libtirpc-dev:amd64 libtirpc-dev 1.3.4+ds-1.3 install ok installed libtirpc3t64:amd64 libtirpc3t64 1.3.4+ds-1.3 install ok installed libtk8.6:amd64 libtk8.6 8.6.14-1 install ok installed libtre5:amd64 libtre5 0.8.0-8 install ok installed libtree-dagnode-perl libtree-dagnode-perl 1.32-1 install ok installed libtry-tiny-perl libtry-tiny-perl 0.32-1 install ok installed libtsan2:amd64 libtsan2 14.2.0-3 install ok installed libtwolame0:amd64 libtwolame0 0.4.0-2+b1 install ok installed libtype-tiny-perl libtype-tiny-perl 2.004000-1 install ok installed libtype-tiny-xs-perl:amd64 libtype-tiny-xs-perl 0.025-2 install ok installed libubsan1:amd64 libubsan1 14.2.0-3 install ok installed libucx0:amd64 libucx0 1.17.0+ds-3 install ok installed libudev1:amd64 libudev1 256.6-1 install ok installed libudfread0:amd64 libudfread0 1.1.2-1+b1 install ok installed libunibreak6:amd64 libunibreak6 6.1-2 install ok installed libunicode-map-perl libunicode-map-perl 0.112-13+b3 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libunwind8:amd64 libunwind8 1.6.2-3.1 install ok installed liburi-perl liburi-perl 5.29-1 install ok installed liburiparser1:amd64 liburiparser1 0.9.8+dfsg-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-8 install ok installed libuv1t64:amd64 libuv1t64 1.48.0-6 install ok installed libva-drm2:amd64 libva-drm2 2.22.0-1 install ok installed libva-x11-2:amd64 libva-x11-2 2.22.0-1 install ok installed libva2:amd64 libva2 2.22.0-1 install ok installed libvariable-magic-perl libvariable-magic-perl 0.64-1 install ok installed libvdpau-va-gl1:amd64 libvdpau-va-gl1 0.4.2-2 install ok installed libvdpau1:amd64 libvdpau1 1.5-3 install ok installed libvidstab1.1:amd64 libvidstab1.1 1.1.0-2+b1 install ok installed libvorbis0a:amd64 libvorbis0a 1.3.7-2 install ok installed libvorbisenc2:amd64 libvorbisenc2 1.3.7-2 install ok installed libvorbisfile3:amd64 libvorbisfile3 1.3.7-2 install ok installed libvpl2 libvpl2 1:2.13.0-1 install ok installed libvpx9:amd64 libvpx9 1.14.1-1 install ok installed libvulkan1:amd64 libvulkan1 1.3.290.0-1 install ok installed libwayland-client0:amd64 libwayland-client0 1.23.0-1 install ok installed libwayland-cursor0:amd64 libwayland-cursor0 1.23.0-1 install ok installed libwayland-egl1:amd64 libwayland-egl1 1.23.0-1 install ok installed libwayland-server0:amd64 libwayland-server0 1.23.0-1 install ok installed libwebp7:amd64 libwebp7 1.4.0-0.1 install ok installed libwebpdemux2:amd64 libwebpdemux2 1.4.0-0.1 install ok installed libwebpmux3:amd64 libwebpmux3 1.4.0-0.1 install ok installed libwmflite-0.2-7:amd64 libwmflite-0.2-7 0.2.13-1.1+b2 install ok installed libwoff1:amd64 libwoff1 1.0.2-2+b1 install ok installed libwww-perl libwww-perl 6.77-1 install ok installed libwww-robotrules-perl libwww-robotrules-perl 6.02-1 install ok installed libx11-6:amd64 libx11-6 2:1.8.7-1+b1 install ok installed libx11-data libx11-data 2:1.8.7-1 install ok installed libx11-protocol-perl libx11-protocol-perl 0.56-9 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.8.7-1+b1 install ok installed libx264-164:amd64 libx264-164 2:0.164.3108+git31e19f9-2 install ok installed libx265-209:amd64 libx265-209 3.6-3 install ok installed libxau6:amd64 libxau6 1:1.0.9-1+b1 install ok installed libxaw7:amd64 libxaw7 2:1.0.14-1+b2 install ok installed libxcb-dri2-0:amd64 libxcb-dri2-0 1.17.0-2 install ok installed libxcb-dri3-0:amd64 libxcb-dri3-0 1.17.0-2 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.17.0-2 install ok installed libxcb-present0:amd64 libxcb-present0 1.17.0-2 install ok installed libxcb-randr0:amd64 libxcb-randr0 1.17.0-2 install ok installed libxcb-render0:amd64 libxcb-render0 1.17.0-2 install ok installed libxcb-shape0:amd64 libxcb-shape0 1.17.0-2 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.17.0-2 install ok installed libxcb-sync1:amd64 libxcb-sync1 1.17.0-2 install ok installed libxcb-xfixes0:amd64 libxcb-xfixes0 1.17.0-2 install ok installed libxcb1:amd64 libxcb1 1.17.0-2 install ok installed libxcomposite1:amd64 libxcomposite1 1:0.4.5-1+b1 install ok installed libxcursor1:amd64 libxcursor1 1:1.2.2-1 install ok installed libxdamage1:amd64 libxdamage1 1:1.1.6-1+b1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3+b1 install ok installed libxerces-c3.2t64:amd64 libxerces-c3.2t64 3.2.4+debian-1.3 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b1 install ok installed libxfixes3:amd64 libxfixes3 1:6.0.0-2+b1 install ok installed libxft2:amd64 libxft2 2.3.6-1+b1 install ok installed libxi6:amd64 libxi6 2:1.8.1-1 install ok installed libxinerama1:amd64 libxinerama1 2:1.1.4-3+b1 install ok installed libxkbcommon0:amd64 libxkbcommon0 1.6.0-1+b1 install ok installed libxkbfile1:amd64 libxkbfile1 1:1.1.0-1+b1 install ok installed libxml-dom-perl libxml-dom-perl 1.46-2 install ok installed libxml-dom-xpath-perl libxml-dom-xpath-perl 0.14-4 install ok installed libxml-filter-buffertext-perl libxml-filter-buffertext-perl 1.01-7 install ok installed libxml-libxml-perl libxml-libxml-perl 2.0207+dfsg+really+2.0134-1+b3 install ok installed libxml-libxslt-perl:amd64 libxml-libxslt-perl 2.002001-1+b2 install ok installed libxml-namespacesupport-perl libxml-namespacesupport-perl 1.12-2 install ok installed libxml-parser-perl libxml-parser-perl 2.47-1+b2 install ok installed libxml-perl libxml-perl 0.08-4 install ok installed libxml-regexp-perl libxml-regexp-perl 0.04-1.1 install ok installed libxml-sax-base-perl libxml-sax-base-perl 1.09-3 install ok installed libxml-sax-expat-perl libxml-sax-expat-perl 0.51-2 install ok installed libxml-sax-perl libxml-sax-perl 1.02+dfsg-3 install ok installed libxml-sax-writer-perl libxml-sax-writer-perl 0.57-3 install ok installed libxml-simple-perl libxml-simple-perl 2.25-2 install ok installed libxml-twig-perl libxml-twig-perl 1:3.52-3 install ok installed libxml-writer-perl libxml-writer-perl 0.900-2 install ok installed libxml-xpath-perl libxml-xpath-perl 1.48-1 install ok installed libxml-xpathengine-perl libxml-xpathengine-perl 0.14-2 install ok installed libxml2:amd64 libxml2 2.9.14+dfsg-1.3+b3 install ok installed libxmlrpc-lite-perl libxmlrpc-lite-perl 0.717-5 install ok installed libxmu6:amd64 libxmu6 2:1.1.3-3+b2 install ok installed libxmuu1:amd64 libxmuu1 2:1.1.3-3+b2 install ok installed libxnvctrl0:amd64 libxnvctrl0 535.171.04-1 install ok installed libxpm4:amd64 libxpm4 1:3.5.17-1+b1 install ok installed libxrandr2:amd64 libxrandr2 2:1.5.4-1 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1.1+b1 install ok installed libxshmfence1:amd64 libxshmfence1 1.3-1+b1 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.35-1.1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1+b1 install ok installed libxstring-perl:amd64 libxstring-perl 0.005-2+b3 install ok installed libxt6t64:amd64 libxt6t64 1:1.2.1-1.2 install ok installed libxtst6:amd64 libxtst6 2:1.2.3-1.1+b1 install ok installed libxv1:amd64 libxv1 2:1.0.11-1.1+b1 install ok installed libxvidcore4:amd64 libxvidcore4 2:1.3.7-1+b1 install ok installed libxxf86dga1:amd64 libxxf86dga1 2:1.1.5-1+b1 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.4-1+b2 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libyaml-0-2:amd64 libyaml-0-2 0.2.5-1+b1 install ok installed libyaml-libyaml-perl libyaml-libyaml-perl 0.89+ds-1+b1 install ok installed libyaml-perl libyaml-perl 1.31-1 install ok installed libyuv0:amd64 libyuv0 0.0.1888.20240710-3 install ok installed libz3-4:amd64 libz3-4 4.8.12-3.1+b2 install ok installed libzimg2:amd64 libzimg2 3.0.5+ds1-1+b1 install ok installed libzix-0-0:amd64 libzix-0-0 0.4.2-2+b1 install ok installed libzmq5:amd64 libzmq5 4.3.5-1+b2 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed libzvbi-common libzvbi-common 0.2.42-2 install ok installed libzvbi0t64:amd64 libzvbi0t64 0.2.42-2 install ok installed libzzip-0-13t64:amd64 libzzip-0-13t64 0.13.72+dfsg.1-1.2+b1 install ok installed linux-libc-dev linux-libc-dev 6.10.9-1 install ok installed linux-sysctl-defaults linux-sysctl-defaults 4.10.1 install ok installed littler littler 0.3.20-1 install ok installed lmodern lmodern 2.005-1 install ok installed login login 1:4.16.0-2+really2.40.2-8 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed loki loki 2.4.7.4-10 install ok installed lua-filesystem:amd64 lua-filesystem 1.8.0-3+b1 install ok installed lua-lpeg:amd64 lua-lpeg 1.0.2-2+b1 install ok installed lua-md5:amd64 lua-md5 1.2+git+1+8d87fee-2+b1 install ok installed luit luit 2.0.20221028-1 install ok installed lynx lynx 2.9.2-1 install ok installed lynx-common lynx-common 2.9.2-1 install ok installed macs macs 3.0.2-1 install ok installed mafft mafft 7.505-1 install ok installed mailcap mailcap 3.72 install ok installed make make 4.3-4.1 install ok installed manpages manpages 6.8-2 install ok installed manpages-dev manpages-dev 6.8-2 install ok installed mapsembler2 mapsembler2 2.2.4+dfsg1-4 install ok installed maq maq 0.7.1-10 install ok installed mariadb-common mariadb-common 1:11.4.3-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed med-cloud med-cloud 3.8.1 install ok installed med-config med-config 3.8.1 install ok installed med-tasks med-tasks 3.8.1 install ok installed media-types media-types 10.1.0 install ok installed melting melting 5.2.0-2 install ok installed menu menu 2.1.50 install ok installed mesa-libgallium:amd64 mesa-libgallium 24.2.2-1 install ok installed mesa-opencl-icd:amd64 mesa-opencl-icd 24.2.2-1 install ok installed mesa-va-drivers:amd64 mesa-va-drivers 24.2.2-1 install ok installed mesa-vdpau-drivers:amd64 mesa-vdpau-drivers 24.2.2-1 install ok installed mesa-vulkan-drivers:amd64 mesa-vulkan-drivers 24.2.2-1 install ok installed minia minia 3.2.6-4+b1 install ok installed mipe mipe 1.1-9 install ok installed mira-assembler mira-assembler 4.9.6-11 install ok installed mira-rfam-12s-rrna mira-rfam-12s-rrna 4.9.6-11 install ok installed mlv-smile mlv-smile 1.47-8 install ok installed mothur mothur 1.48.1-1 install ok installed mount mount 2.40.2-8 install ok installed mpi-default-bin mpi-default-bin 1.17 install ok installed mrbayes mrbayes 3.2.7a-7+b1 install ok installed mummer mummer 3.23+dfsg-8 install ok installed mupdf-tools mupdf-tools 1.24.8+ds2-2+b2 install ok installed muscle muscle 1:5.1.0-1 install ok installed mustang mustang 3.2.4-1 install ok installed mysql-common mysql-common 5.8+1.1.1 install ok installed ncbi-blast+ ncbi-blast+ 2.16.0+ds-6 install ok installed ncbi-blast+-legacy ncbi-blast+-legacy 2.16.0+ds-6 install ok installed ncbi-data ncbi-data 6.1.20170106+dfsg2-4 install ok installed ncbi-epcr ncbi-epcr 2.3.12-1-10 install ok installed ncbi-tools-bin ncbi-tools-bin 6.1.20170106+dfsg2-4 install ok installed ncbi-vdb-data ncbi-vdb-data 3.0.2+dfsg-2 install ok installed ncoils ncoils 2002-9 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed neobio neobio 0.0.20030929-6 install ok installed netbase netbase 6.4 install ok installed netpbm netpbm 2:11.07.00-2 install ok installed node-acorn node-acorn 8.8.1+ds+~cs25.17.7-2 install ok installed node-balanced-match node-balanced-match 2.0.0-1 install ok installed node-bootstrap-sass node-bootstrap-sass 3.4.3-2 install ok installed node-brace-expansion node-brace-expansion 2.0.1+~1.1.0-1 install ok installed node-cjs-module-lexer node-cjs-module-lexer 1.2.3+dfsg-1 install ok installed node-highlight.js node-highlight.js 9.18.5+dfsg1-2 install ok installed node-html5shiv node-html5shiv 3.7.3+dfsg-5 install ok installed node-jquery node-jquery 3.6.1+dfsg+~3.5.14-1 install ok installed node-jquery-ui node-jquery-ui 1.13.2+dfsg-1 install ok installed node-minimatch node-minimatch 9.0.3-5 install ok installed node-normalize.css node-normalize.css 8.0.1-5 install ok installed node-undici node-undici 5.28.4+dfsg1+~cs23.12.11-2 install ok installed node-xtend node-xtend 4.0.2-3 install ok installed nodejs nodejs 20.17.0+dfsg-2 install ok installed nodejs-doc nodejs-doc 20.17.0+dfsg-2 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.3.2-1+b1 install ok installed openjdk-21-jdk-headless:amd64 openjdk-21-jdk-headless 21.0.5~8ea-1 install ok installed openjdk-21-jre:amd64 openjdk-21-jre 21.0.5~8ea-1 install ok installed openjdk-21-jre-headless:amd64 openjdk-21-jre-headless 21.0.5~8ea-1 install ok installed openmpi-bin openmpi-bin 4.1.6-13.3 install ok installed openmpi-common openmpi-common 4.1.6-13.3 install ok installed openssh-client openssh-client 1:9.8p1-8 install ok installed openssl openssl 3.3.2-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed pal2nal pal2nal 14.1-3 install ok installed paml paml 4.9j+dfsg-5 install ok installed pandoc pandoc 3.1.3+ds-3+b1 install ok installed pandoc-data pandoc-data 3.1.3-3 install ok installed paraclu paraclu 10-1 install ok installed parallel parallel 20240222+ds-2 install ok installed parsinsert parsinsert 1.04-15 install ok installed passwd passwd 1:4.16.0-4 install ok installed patch patch 2.7.6-7 install ok installed pdb2pqr pdb2pqr 3.6.1+dfsg-1 install ok installed perl perl 5.38.2-5 install ok installed perl-base perl-base 5.38.2-5 install ok installed perl-doc perl-doc 5.38.2-5 install ok installed perl-modules-5.38 perl-modules-5.38 5.38.2-5 install ok installed perl-openssl-defaults:amd64 perl-openssl-defaults 7+b2 install ok installed perl-tk perl-tk 1:804.036+dfsg1-3 install ok installed perm perm 0.4.0-8+b1 install ok installed phylip phylip 1:3.697+dfsg-4 install ok installed phyml phyml 3:3.3.20220408-3+b1 install ok installed phyutility phyutility 2.7.3+dfsg-4 install ok installed picard-tools picard-tools 3.1.1+dfsg-1 install ok installed pinentry-curses pinentry-curses 1.2.1-4+b1 install ok installed pkgconf:amd64 pkgconf 1.8.1-3 install ok installed pkgconf-bin pkgconf-bin 1.8.1-3 install ok installed plink plink 1.07+dfsg-4+b1 install ok installed plink1.9 plink1.9 1.90~b7.2-231211-1 install ok installed plink2 plink2 2.00~a5.8-231123+dfsg-1+b1 install ok installed poa poa 2.0+20060928-9 install ok installed pocketsphinx-en-us pocketsphinx-en-us 0.8+5prealpha+1-15 install ok installed poppler-data poppler-data 0.4.12-1 install ok installed prank prank 0.0.170427+dfsg-3 install ok installed prime-phylo prime-phylo 1.0.11-12 install ok installed primer3 primer3 2.6.1-4 install ok installed probabel probabel 0.5.0+dfsg-6 install ok installed probalign probalign 1.4-10 install ok installed probcons probcons 1.12-14 install ok installed procps procps 2:4.0.4-5 install ok installed proda proda 1.0-14 install ok installed prodigal prodigal 1:2.6.3-6 install ok installed proj-bin proj-bin 9.5.0-1 install ok installed proj-data proj-data 9.5.0-1 install ok installed psmisc psmisc 23.7-1 install ok installed publicsuffix publicsuffix 20231001.0357-0.1 install ok installed python-babel-localedata python-babel-localedata 2.14.0-1 install ok installed python-biopython-doc python-biopython-doc 1.83+dfsg1-5 install ok installed python-matplotlib-data python-matplotlib-data 3.8.3-3 install ok installed python3 python3 3.12.5-1+b1 install ok installed python3-appdirs python3-appdirs 1.4.4-4 install ok installed python3-argcomplete python3-argcomplete 3.4.0-2 install ok installed python3-argh python3-argh 0.31.2-1 install ok installed python3-attr python3-attr 23.2.0-2 install ok installed python3-autocommand python3-autocommand 2.2.2-3 install ok installed python3-babel python3-babel 2.14.0-1 install ok installed python3-biomaj3-cli python3-biomaj3-cli 3.1.11-5 install ok installed python3-biomaj3-core python3-biomaj3-core 3.0.28-2 install ok installed python3-biopython python3-biopython 1.83+dfsg1-5 install ok installed python3-brotli python3-brotli 1.1.0-2+b4 install ok installed python3-bs4 python3-bs4 4.12.3-3 install ok installed python3-cairo python3-cairo 1.26.1-2 install ok installed python3-certifi python3-certifi 2024.8.30-1 install ok installed python3-cffi-backend:amd64 python3-cffi-backend 1.17.1-1 install ok installed python3-chardet python3-chardet 5.2.0+dfsg-1 install ok installed python3-charset-normalizer python3-charset-normalizer 3.3.2-4 install ok installed python3-contourpy python3-contourpy 1.3.0-1 install ok installed python3-cssselect python3-cssselect 1.2.0-4 install ok installed python3-cycler python3-cycler 0.12.1-1 install ok installed python3-cykhash python3-cykhash 2.0.0-3+b1 install ok installed python3-dateutil python3-dateutil 2.9.0-2 install ok installed python3-decorator python3-decorator 5.1.1-5 install ok installed python3-docutils python3-docutils 0.21.2+dfsg-2 install ok installed python3-elasticsearch python3-elasticsearch 7.17.6-1 install ok installed python3-fonttools python3-fonttools 4.46.0-1+b1 install ok installed python3-freetype python3-freetype 2.5.1-1 install ok installed python3-fs python3-fs 2.4.16-4 install ok installed python3-gffutils python3-gffutils 0.13-1 install ok installed python3-hisat2 python3-hisat2 2.2.1-5 install ok installed python3-hmmlearn python3-hmmlearn 0.3.0-5+b1 install ok installed python3-html5lib python3-html5lib 1.1-6 install ok installed python3-htseq python3-htseq 2.0.5-2+b1 install ok installed python3-idna python3-idna 3.8-2 install ok installed python3-importlib-metadata python3-importlib-metadata 8.5.0-1 install ok installed python3-inflect python3-inflect 7.3.1-2 install ok installed python3-iniconfig python3-iniconfig 1.1.1-2 install ok installed python3-jaraco.context python3-jaraco.context 6.0.0-1 install ok installed python3-jaraco.functools python3-jaraco.functools 4.0.2-1 install ok installed python3-jinja2 python3-jinja2 3.1.3-1 install ok installed python3-joblib python3-joblib 1.3.2-2 install ok installed python3-kiwisolver python3-kiwisolver 1.4.5-1+b1 install ok installed python3-lxml:amd64 python3-lxml 5.3.0-1 install ok installed python3-lz4 python3-lz4 4.0.2+dfsg-1+b4 install ok installed python3-markupsafe python3-markupsafe 2.1.5-1+b1 install ok installed python3-matplotlib python3-matplotlib 3.8.3-3 install ok installed python3-minimal python3-minimal 3.12.5-1+b1 install ok installed python3-more-itertools python3-more-itertools 10.4.0-1 install ok installed python3-mpmath python3-mpmath 1.3.0-1 install ok installed python3-numpy python3-numpy 1:1.26.4+ds-11 install ok installed python3-olefile python3-olefile 0.46-3 install ok installed python3-packaging python3-packaging 24.1-1 install ok installed python3-pdb2pqr python3-pdb2pqr 3.6.1+dfsg-1 install ok installed python3-pdbx python3-pdbx 2.0.1-2 install ok installed python3-pil:amd64 python3-pil 10.4.0-1 install ok installed python3-pil.imagetk:amd64 python3-pil.imagetk 10.4.0-1 install ok installed python3-pkg-resources python3-pkg-resources 74.1.2-2 install ok installed python3-pluggy python3-pluggy 1.5.0-1 install ok installed python3-propka python3-propka 3.5.1-1 install ok installed python3-psutil python3-psutil 5.9.8-2 install ok installed python3-pybedtools python3-pybedtools 0.10.0-1+b1 install ok installed python3-pyfaidx python3-pyfaidx 0.8.1.2-1 install ok installed python3-pygments python3-pygments 2.18.0+dfsg-1 install ok installed python3-pyparsing python3-pyparsing 3.1.2-1 install ok installed python3-pysam python3-pysam 0.22.1+ds-2+b1 install ok installed python3-pytest python3-pytest 8.3.2-1 install ok installed python3-reportlab python3-reportlab 4.2.2-1 install ok installed python3-requests python3-requests 2.32.3+dfsg-1 install ok installed python3-rlpycairo python3-rlpycairo 0.3.0-3 install ok installed python3-roman python3-roman 4.2-1 install ok installed python3-rpy2 python3-rpy2 3.5.16-3 install ok installed python3-scipy python3-scipy 1.13.1-5 install ok installed python3-simplejson python3-simplejson 3.19.3-1 install ok installed python3-six python3-six 1.16.0-7 install ok installed python3-sklearn python3-sklearn 1.4.2+dfsg-6 install ok installed python3-sklearn-lib:amd64 python3-sklearn-lib 1.4.2+dfsg-6 install ok installed python3-soupsieve python3-soupsieve 2.6-1 install ok installed python3-sympy python3-sympy 1.13.2-1 install ok installed python3-threadpoolctl python3-threadpoolctl 3.1.0-1 install ok installed python3-tk:amd64 python3-tk 3.12.6-1 install ok installed python3-typeguard python3-typeguard 4.3.0-1 install ok installed python3-typing-extensions python3-typing-extensions 4.12.2-2 install ok installed python3-tz python3-tz 2024.1-2 install ok installed python3-tzlocal python3-tzlocal 5.2-1.1 install ok installed python3-ufolib2 python3-ufolib2 0.16.0+dfsg1-1 install ok installed python3-unicodedata2 python3-unicodedata2 15.1.0+ds-1+b2 install ok installed python3-urllib3 python3-urllib3 2.0.7-2 install ok installed python3-webencodings python3-webencodings 0.5.1-5 install ok installed python3-zipp python3-zipp 3.20.2-1 install ok installed python3.12 python3.12 3.12.6-1 install ok installed python3.12-minimal python3.12-minimal 3.12.6-1 install ok installed python3.12-tk python3.12-tk 3.12.6-1 install ok installed python3.13-tk python3.13-tk 3.13.0~rc2-1 install ok installed r-base-core r-base-core 4.4.1-3 install ok installed r-base-dev r-base-dev 4.4.1-3 install ok installed r-bioc-biobase r-bioc-biobase 2.64.0-4 install ok installed r-bioc-biocgenerics r-bioc-biocgenerics 0.50.0-2 install ok installed r-bioc-biocstyle r-bioc-biocstyle 2.32.1+dfsg-1 install ok installed r-bioc-biocversion r-bioc-biocversion 3.19.1-1 install ok installed r-bioc-edger r-bioc-edger 4.2.1+dfsg-1 install ok installed r-bioc-graph r-bioc-graph 1.82.0-1 install ok installed r-bioc-hilbertvis r-bioc-hilbertvis 1.62.0-1 install ok installed r-bioc-limma r-bioc-limma 3.60.4+dfsg-1 install ok installed r-cran-abind r-cran-abind 1.4-8-1 install ok installed r-cran-acepack r-cran-acepack 1.4.2-1 install ok installed r-cran-actuar r-cran-actuar 3.3-4-1 install ok installed r-cran-admisc r-cran-admisc 0.36-1 install ok installed r-cran-aer r-cran-aer 1.2-12-1 install ok installed r-cran-afex r-cran-afex 1.4-1-1 install ok installed r-cran-amelia r-cran-amelia 1.8.2-1 install ok installed r-cran-ape r-cran-ape 5.8-1 install ok installed r-cran-arm r-cran-arm 1.14-4-1 install ok installed r-cran-askpass r-cran-askpass 1.2.0-1 install ok installed r-cran-av r-cran-av 0.9.0+dfsg-1+b1 install ok installed r-cran-backports r-cran-backports 1.4.1-1 install ok installed r-cran-base64enc r-cran-base64enc 0.1-3-3 install ok installed r-cran-base64url r-cran-base64url 1.4-2+b1 install ok installed r-cran-batchjobs r-cran-batchjobs 1.9-1 install ok installed r-cran-batchtools r-cran-batchtools 0.9.17+dfsg-1 install ok installed r-cran-bayesfactor r-cran-bayesfactor 0.9.12-4.7+dfsg-1 install ok installed r-cran-bayesplot r-cran-bayesplot 1.11.1-1 install ok installed r-cran-bbmisc r-cran-bbmisc 1.13-1 install ok installed r-cran-bbmle r-cran-bbmle 1.0.25.1-1 install ok installed r-cran-bdsmatrix r-cran-bdsmatrix 1.3-7-1 install ok installed r-cran-beeswarm r-cran-beeswarm 0.4.0-1+b1 install ok installed r-cran-bench r-cran-bench 1.1.3-1 install ok installed r-cran-bh r-cran-bh 1.84.0-1 install ok installed r-cran-biasedurn r-cran-biasedurn 2.0.11-1 install ok installed r-cran-biocmanager r-cran-biocmanager 1.30.25+dfsg-1 install ok installed r-cran-bit r-cran-bit 4.0.5-1 install ok installed r-cran-bit64 r-cran-bit64 4.0.5-1 install ok installed r-cran-bitops r-cran-bitops 1.0-8-1 install ok installed r-cran-blme r-cran-blme 1.0-5-1 install ok installed r-cran-blob r-cran-blob 1.2.4-1 install ok installed r-cran-bookdown r-cran-bookdown 0.40+dfsg-1 install ok installed r-cran-boot r-cran-boot 1.3-31-1 install ok installed r-cran-brew r-cran-brew 1.0-10-1 install ok installed r-cran-brglm2 r-cran-brglm2 0.9.2+dfsg-1 install ok installed r-cran-bridgesampling r-cran-bridgesampling 1.1-2-1 install ok installed r-cran-brio r-cran-brio 1.1.5-1 install ok installed r-cran-brms r-cran-brms 2.20.4-1 install ok installed r-cran-brobdingnag r-cran-brobdingnag 1.2-9-1 install ok installed r-cran-broom r-cran-broom 1.0.6+dfsg-1 install ok installed r-cran-broom.helpers r-cran-broom.helpers 1.14.0-2 install ok installed r-cran-broom.mixed r-cran-broom.mixed 0.2.9.5-1 install ok installed r-cran-bslib r-cran-bslib 0.7.0+dfsg-1 install ok installed r-cran-ca r-cran-ca 0.71.1-2 install ok installed r-cran-cachem r-cran-cachem 1.1.0-1 install ok installed r-cran-cairo r-cran-cairo 1.6-2-1 install ok installed r-cran-callr r-cran-callr 3.7.6-1 install ok installed r-cran-car r-cran-car 3.1-2-3 install ok installed r-cran-cardata r-cran-cardata 3.0.5-1 install ok installed r-cran-caret r-cran-caret 6.0-94+dfsg-1 install ok installed r-cran-catools r-cran-catools 1.18.2-1+b1 install ok installed r-cran-cba r-cran-cba 0.2-25-1 install ok installed r-cran-cellranger r-cran-cellranger 1.1.0-3 install ok installed r-cran-checkmate r-cran-checkmate 2.3.1-1 install ok installed r-cran-chk r-cran-chk 0.9.1-1 install ok installed r-cran-chron r-cran-chron 2.3-61-2 install ok installed r-cran-class r-cran-class 7.3-22-2 install ok installed r-cran-cli r-cran-cli 3.6.3-1 install ok installed r-cran-clipr r-cran-clipr 0.8.0-1 install ok installed r-cran-clock r-cran-clock 0.7.0-1.1 install ok installed r-cran-clubsandwich r-cran-clubsandwich 0.5.11-1 install ok installed r-cran-cluster r-cran-cluster 2.1.6-1 install ok installed r-cran-cmprsk r-cran-cmprsk 2.2-11-1 install ok installed r-cran-coda r-cran-coda 0.19-4.1-1 install ok installed r-cran-codetools r-cran-codetools 0.2-20-1 install ok installed r-cran-coin r-cran-coin 1.4-3-1 install ok installed r-cran-collapse r-cran-collapse 2.0.16-1 install ok installed r-cran-colorspace r-cran-colorspace 2.1-0+dfsg-1 install ok installed r-cran-colourpicker r-cran-colourpicker 1.3.0+dfsg-1 install ok installed r-cran-commonmark r-cran-commonmark 1.9.1-1 install ok installed r-cran-conflicted r-cran-conflicted 1.2.0-1.1 install ok installed r-cran-conquer r-cran-conquer 1.3.3-1 install ok installed r-cran-contfrac r-cran-contfrac 1.1-12-2 install ok installed r-cran-corrplot r-cran-corrplot 0.94-1 install ok installed r-cran-covr r-cran-covr 3.6.4+dfsg-1 install ok installed r-cran-cowplot r-cran-cowplot 1.1.3+dfsg-1 install ok installed r-cran-cpp11 r-cran-cpp11 0.4.7-1 install ok installed r-cran-crayon r-cran-crayon 1.5.2-1 install ok installed r-cran-credentials r-cran-credentials 2.0.1-1 install ok installed r-cran-crosstalk r-cran-crosstalk 1.2.1+dfsg-1 install ok installed r-cran-curl r-cran-curl 5.2.2+dfsg-1 install ok installed r-cran-cvar r-cran-cvar 0.5-2 install ok installed r-cran-cvst r-cran-cvst 0.2-3-1 install ok installed r-cran-cyclocomp r-cran-cyclocomp 1.1.1-1 install ok installed r-cran-data.table r-cran-data.table 1.15.4+dfsg-2.2 install ok installed r-cran-datawizard r-cran-datawizard 0.12.3+dfsg-1 install ok installed r-cran-date r-cran-date 1.2.42-1 install ok installed r-cran-dbi r-cran-dbi 1.2.3-1 install ok installed r-cran-dbitest r-cran-dbitest 1.8.0-1 install ok installed r-cran-dbplyr r-cran-dbplyr 2.4.0+dfsg-1 install ok installed r-cran-dbscan r-cran-dbscan 1.2-0+ds-1 install ok installed r-cran-ddalpha r-cran-ddalpha 1.3.15-1 install ok installed r-cran-decor r-cran-decor 1.0.2-1 install ok installed r-cran-deldir r-cran-deldir 2.0-4-1 install ok installed r-cran-dendextend r-cran-dendextend 1.17.1+dfsg-1 install ok installed r-cran-deoptimr r-cran-deoptimr 1.1-3-1 install ok installed r-cran-deriv r-cran-deriv 4.1.6-1 install ok installed r-cran-desc r-cran-desc 1.4.3-1 install ok installed r-cran-desolve r-cran-desolve 1.40-1 install ok installed r-cran-devtools r-cran-devtools 2.4.5-1 install ok installed r-cran-dfoptim r-cran-dfoptim 2023.1.0-1 install ok installed r-cran-diagram r-cran-diagram 1.6.5-2 install ok installed r-cran-dials r-cran-dials 1.2.1-1 install ok installed r-cran-dicedesign r-cran-dicedesign 1.10-1 install ok installed r-cran-dichromat r-cran-dichromat 1:2.0-0.1-1 install ok installed r-cran-diffobj r-cran-diffobj 0.3.5-1+b1 install ok installed r-cran-digest r-cran-digest 0.6.37-1 install ok installed r-cran-dimred r-cran-dimred 0.2.6-4 install ok installed r-cran-diptest r-cran-diptest 0.77-0-1 install ok installed r-cran-distributional r-cran-distributional 0.4.0-1 install ok installed r-cran-doby r-cran-doby 4.6.22-2 install ok installed r-cran-docopt r-cran-docopt 0.7.1-2 install ok installed r-cran-domc r-cran-domc 1.3.8-1 install ok installed r-cran-doparallel r-cran-doparallel 1.0.17-1 install ok installed r-cran-dorng r-cran-dorng 1.8.6-1 install ok installed r-cran-dotcall64 r-cran-dotcall64 1.1-1-1 install ok installed r-cran-downlit r-cran-downlit 0.4.4-1 install ok installed r-cran-dplyr r-cran-dplyr 1.1.4-1 install ok installed r-cran-drr r-cran-drr 0.0.4-2 install ok installed r-cran-dt r-cran-dt 0.33+dfsg-1 install ok installed r-cran-dtplyr r-cran-dtplyr 1.3.1-1 install ok installed r-cran-dygraphs r-cran-dygraphs 1.1.1.6+dfsg-4 install ok installed r-cran-dynlm r-cran-dynlm 0.3.6-2 install ok installed r-cran-e1071 r-cran-e1071 1.7-16-1 install ok installed r-cran-eaf r-cran-eaf 2.5-1+b1 install ok installed r-cran-earth r-cran-earth 5.3.3-1 install ok installed r-cran-effects r-cran-effects 4.2.2-1 install ok installed r-cran-ellipse r-cran-ellipse 0.5.0-1 install ok installed r-cran-ellipsis r-cran-ellipsis 0.3.2-2 install ok installed r-cran-elliptic r-cran-elliptic 1.4-0-2 install ok installed r-cran-emdbook r-cran-emdbook 1.3.13+ds-1 install ok installed r-cran-emmeans r-cran-emmeans 1.10.4+dfsg-1 install ok installed r-cran-emoa r-cran-emoa 0.5-2-1 install ok installed r-cran-energy r-cran-energy 1.7-12-1 install ok installed r-cran-enrichwith r-cran-enrichwith 0.3.1+dfsg-2 install ok installed r-cran-epi r-cran-epi 2.53-1 install ok installed r-cran-estimability r-cran-estimability 1.5-1 install ok installed r-cran-etm r-cran-etm 1.1.1-1 install ok installed r-cran-evaluate r-cran-evaluate 0.24.0-1 install ok installed r-cran-evd r-cran-evd 2.3-7-1 install ok installed r-cran-expint r-cran-expint 0.1-8-1 install ok installed r-cran-expm r-cran-expm 0.999-9-1 install ok installed r-cran-extradistr r-cran-extradistr 1.10.0-1 install ok installed r-cran-fansi r-cran-fansi 1.0.5-1 install ok installed r-cran-farver r-cran-farver 2.1.2-1 install ok installed r-cran-fastica r-cran-fastica 1.2-5.1-1 install ok installed r-cran-fastmap r-cran-fastmap 1.2.0-1 install ok installed r-cran-fastmatch r-cran-fastmatch 1.1-4-1 install ok installed r-cran-fbasics r-cran-fbasics 4041.97-1 install ok installed r-cran-fgarch r-cran-fgarch 4033.92-1 install ok installed r-cran-fields r-cran-fields 16.2-1 install ok installed r-cran-filehash r-cran-filehash 2.4-5-1 install ok installed r-cran-fit.models r-cran-fit.models 0.64-1 install ok installed r-cran-flexmix r-cran-flexmix 2.3-19-1 install ok installed r-cran-fnn r-cran-fnn 1.1.4-1 install ok installed r-cran-fontawesome r-cran-fontawesome 0.5.2-1 install ok installed r-cran-fontbitstreamvera r-cran-fontbitstreamvera 0.1.1+dfsg-4 install ok installed r-cran-fontliberation r-cran-fontliberation 0.1.0+dfsg-5 install ok installed r-cran-fontquiver r-cran-fontquiver 0.2.1-4 install ok installed r-cran-forcats r-cran-forcats 1.0.0-1 install ok installed r-cran-foreach r-cran-foreach 1.5.2-1 install ok installed r-cran-forecast r-cran-forecast 8.23.0-1 install ok installed r-cran-foreign r-cran-foreign 0.8.87-1 install ok installed r-cran-formatr r-cran-formatr 1.14-2 install ok installed r-cran-formattable r-cran-formattable 0.2.1+dfsg-1 install ok installed r-cran-formula r-cran-formula 1.2-5-1 install ok installed r-cran-fpc r-cran-fpc 2.2-11-1 install ok installed r-cran-fracdiff r-cran-fracdiff 1.5-3-1 install ok installed r-cran-fs r-cran-fs 1.6.4+dfsg-1 install ok installed r-cran-furrr r-cran-furrr 0.3.1-1 install ok installed r-cran-futile.logger r-cran-futile.logger 1.4.3-4 install ok installed r-cran-futile.options r-cran-futile.options 1.0.1-3 install ok installed r-cran-future r-cran-future 1.34.0+dfsg-1 install ok installed r-cran-future.apply r-cran-future.apply 1.11.2+dfsg-1 install ok installed r-cran-g.data r-cran-g.data 2.4.1-1 install ok installed r-cran-gam r-cran-gam 1.22-3-1 install ok installed r-cran-gamm4 r-cran-gamm4 0.2-6-2 install ok installed r-cran-gargle r-cran-gargle 1.5.2-1 install ok installed r-cran-gbrd r-cran-gbrd 0.4.12-1 install ok installed r-cran-gbutils r-cran-gbutils 0.5-3 install ok installed r-cran-gclus r-cran-gclus 1.3.2-2 install ok installed r-cran-gdata r-cran-gdata 3.0.0-1 install ok installed r-cran-gee r-cran-gee 4.13-27-1 install ok installed r-cran-geepack r-cran-geepack 1.3.11.1-1 install ok installed r-cran-generics r-cran-generics 0.1.3-1 install ok installed r-cran-geometry r-cran-geometry 0.4.7-1 install ok installed r-cran-geosphere r-cran-geosphere 1.5-18-1 install ok installed r-cran-gert r-cran-gert 2.1.1+dfsg-1 install ok installed r-cran-ggally r-cran-ggally 2.2.1-1 install ok installed r-cran-gganimate r-cran-gganimate 1.0.8-1 install ok installed r-cran-ggbeeswarm r-cran-ggbeeswarm 0.7.2-1 install ok installed r-cran-ggeffects r-cran-ggeffects 1.7.0+dfsg-1 install ok installed r-cran-ggforce r-cran-ggforce 0.4.2-1 install ok installed r-cran-ggfortify r-cran-ggfortify 0.4.17+dfsg-1 install ok installed r-cran-ggplot2 r-cran-ggplot2 3.5.1+dfsg-1 install ok installed r-cran-ggpubr r-cran-ggpubr 0.6.0-1 install ok installed r-cran-ggrepel r-cran-ggrepel 0.9.5-2 install ok installed r-cran-ggridges r-cran-ggridges 0.5.6-1 install ok installed r-cran-ggsci r-cran-ggsci 3.2.0-1 install ok installed r-cran-ggsignif r-cran-ggsignif 0.6.4-1 install ok installed r-cran-ggstats r-cran-ggstats 0.5.1-2 install ok installed r-cran-gh r-cran-gh 1.4.1-1 install ok installed r-cran-git2r r-cran-git2r 0.33.0+dfsg-1 install ok installed r-cran-gitcreds r-cran-gitcreds 0.1.2-1 install ok installed r-cran-glmnet r-cran-glmnet 4.1-8-1 install ok installed r-cran-globals r-cran-globals 0.16.3-1 install ok installed r-cran-glue r-cran-glue 1.7.0-1 install ok installed r-cran-gmm r-cran-gmm 1.8-1 install ok installed r-cran-gmp r-cran-gmp 0.7-4-1 install ok installed r-cran-googledrive r-cran-googledrive 2.1.1-1 install ok installed r-cran-googlesheets4 r-cran-googlesheets4 1.1.1-1 install ok installed r-cran-gower r-cran-gower 1.0.1-1 install ok installed r-cran-gparotation r-cran-gparotation 2024.2-1-1 install ok installed r-cran-gplots r-cran-gplots 3.1.3.1-1 install ok installed r-cran-gridbase r-cran-gridbase 0.4-7-5 install ok installed r-cran-gridextra r-cran-gridextra 2.3-3 install ok installed r-cran-gridgraphics r-cran-gridgraphics 0.5-1-1 install ok installed r-cran-gridsvg r-cran-gridsvg 1.7-5-1 install ok installed r-cran-gsl r-cran-gsl 2.1-8-1+b1 install ok installed r-cran-gss r-cran-gss 2.2-7-1 install ok installed r-cran-gtable r-cran-gtable 0.3.5+dfsg-1 install ok installed r-cran-gtools r-cran-gtools 3.9.5-1 install ok installed r-cran-hardhat r-cran-hardhat 1.4.0+dfsg-1 install ok installed r-cran-haven r-cran-haven 2.5.4-1 install ok installed r-cran-here r-cran-here 1.0.1-2 install ok installed r-cran-hexbin r-cran-hexbin 1.28.3-1 install ok installed r-cran-highr r-cran-highr 0.11+dfsg-1 install ok installed r-cran-hmisc r-cran-hmisc 5.1-3-1 install ok installed r-cran-hms r-cran-hms 1.1.3-1 install ok installed r-cran-hsaur3 r-cran-hsaur3 1.0-15-1 install ok installed r-cran-htmltable r-cran-htmltable 2.4.3-1 install ok installed r-cran-htmltools r-cran-htmltools 0.5.8.1-1 install ok installed r-cran-htmlwidgets r-cran-htmlwidgets 1.6.4+dfsg-1 install ok installed r-cran-httptest2 r-cran-httptest2 1.1.0+ds-2 install ok installed r-cran-httpuv r-cran-httpuv 1.6.15+dfsg-1 install ok installed r-cran-httr r-cran-httr 1.4.7+dfsg-1 install ok installed r-cran-httr2 r-cran-httr2 1.0.4-1 install ok installed r-cran-hunspell r-cran-hunspell 3.0.3+dfsg2-2 install ok installed r-cran-hypergeo r-cran-hypergeo 1.2-13-4 install ok installed r-cran-ids r-cran-ids 1.0.1-2 install ok installed r-cran-igraph r-cran-igraph 2.0.3-1 install ok installed r-cran-ini r-cran-ini 0.3.1-2 install ok installed r-cran-inline r-cran-inline 0.3.19-2 install ok installed r-cran-insight r-cran-insight 0.20.4+dfsg-1 install ok installed r-cran-intergraph r-cran-intergraph 2.0-4-2 install ok installed r-cran-interp r-cran-interp 1.1-6-1 install ok installed r-cran-inum r-cran-inum 1.0-5-1 install ok installed r-cran-ipred r-cran-ipred 0.9-15-1 install ok installed r-cran-irace r-cran-irace 3.5-2 install ok installed r-cran-irdisplay r-cran-irdisplay 1.1-1 install ok installed r-cran-irlba r-cran-irlba 2.3.5.1-4 install ok installed r-cran-isoband r-cran-isoband 0.2.7-1 install ok installed r-cran-iterators r-cran-iterators 1.0.14-1 install ok installed r-cran-itertools r-cran-itertools 0.1-3-3 install ok installed r-cran-janeaustenr r-cran-janeaustenr 1.0.0-1 install ok installed r-cran-jomo r-cran-jomo 2.7-6-1 install ok installed r-cran-jpeg r-cran-jpeg 0.1-10-1 install ok installed r-cran-jquerylib r-cran-jquerylib 0.1.4+dfsg-4 install ok installed r-cran-jsonlite r-cran-jsonlite 1.8.8+dfsg-1 install ok installed r-cran-kableextra r-cran-kableextra 1.4.0+dfsg-1 install ok installed r-cran-kernlab r-cran-kernlab 0.9-33-1 install ok installed r-cran-kernsmooth r-cran-kernsmooth 2.23-24-1 install ok installed r-cran-kmi r-cran-kmi 0.5.5-2 install ok installed r-cran-knitr r-cran-knitr 1.48+dfsg-1 install ok installed r-cran-ks r-cran-ks 1.14.2-1 install ok installed r-cran-labeling r-cran-labeling 0.4.3-1 install ok installed r-cran-labelled r-cran-labelled 2.12.0-2 install ok installed r-cran-lambda.r r-cran-lambda.r 1.2.4-2 install ok installed r-cran-later r-cran-later 1.3.2+dfsg-1 install ok installed r-cran-lattice r-cran-lattice 0.22-6-1 install ok installed r-cran-latticeextra r-cran-latticeextra 0.6-30-1 install ok installed r-cran-lava r-cran-lava 1.7.3+dfsg-1 install ok installed r-cran-lavaan r-cran-lavaan 0.6.18-1 install ok installed r-cran-lavasearch2 r-cran-lavasearch2 2.0.3+dfsg-1 install ok installed r-cran-lazyeval r-cran-lazyeval 0.2.2-1+b1 install ok installed r-cran-lbfgsb3c r-cran-lbfgsb3c 2020-3.3-1 install ok installed r-cran-leaps r-cran-leaps 3.2-1 install ok installed r-cran-lhs r-cran-lhs 1.2.0-1 install ok installed r-cran-libcoin r-cran-libcoin 1.0-10-1 install ok installed r-cran-lifecycle r-cran-lifecycle 1.0.4+dfsg-1 install ok installed r-cran-linprog r-cran-linprog 0.9-4-1 install ok installed r-cran-lintr r-cran-lintr 3.1.2-1 install ok installed r-cran-listenv r-cran-listenv 0.9.1+dfsg-1 install ok installed r-cran-littler r-cran-littler 0.3.20-1 install ok installed r-cran-lme4 r-cran-lme4 1.1-35.5-1 install ok installed r-cran-lmertest r-cran-lmertest 3.1-3-2 install ok installed r-cran-lmtest r-cran-lmtest 0.9.40-1 install ok installed r-cran-lobstr r-cran-lobstr 1.1.2-1 install ok installed r-cran-locfit r-cran-locfit 1.5-9.10-1 install ok installed r-cran-logcondens r-cran-logcondens 2.1.8-1 install ok installed r-cran-logspline r-cran-logspline 2.1.22-1 install ok installed r-cran-loo r-cran-loo 2.8.0-1 install ok installed r-cran-lpsolve r-cran-lpsolve 5.6.21-1 install ok installed r-cran-lsmeans r-cran-lsmeans 2.30-0-2 install ok installed r-cran-lubridate r-cran-lubridate 1.9.3+dfsg-1 install ok installed r-cran-magic r-cran-magic 1.6-1-1 install ok installed r-cran-magick r-cran-magick 2.8.3+dfsg-1 install ok installed r-cran-magrittr r-cran-magrittr 2.0.3-1 install ok installed r-cran-mapdata r-cran-mapdata 2.3.1-1 install ok installed r-cran-mapproj r-cran-mapproj 1.2.11-1 install ok installed r-cran-maps r-cran-maps 3.4.2-1 install ok installed r-cran-marginaleffects r-cran-marginaleffects 0.21.0-1 install ok installed r-cran-markdown r-cran-markdown 1.12+dfsg-2 install ok installed r-cran-mass r-cran-mass 7.3-61-1 install ok installed r-cran-matchit r-cran-matchit 4.5.5-1 install ok installed r-cran-mathjaxr r-cran-mathjaxr 1.6-0-1 install ok installed r-cran-matrix r-cran-matrix 1.7-0-3 install ok installed r-cran-matrixmodels r-cran-matrixmodels 0.5-3-1 install ok installed r-cran-matrixstats r-cran-matrixstats 1.4.1-1 install ok installed r-cran-maxlik r-cran-maxlik 1.5-2-1 install ok installed r-cran-mclogit r-cran-mclogit 0.9.6-2 install ok installed r-cran-mclust r-cran-mclust 6.1.1-1 install ok installed r-cran-mda r-cran-mda 0.5-4-1 install ok installed r-cran-memisc r-cran-memisc 0.99.31.7+dfsg-1 install ok installed r-cran-memoise r-cran-memoise 2.0.1-1 install ok installed r-cran-metadat r-cran-metadat 1.2-0-2 install ok installed r-cran-metafor r-cran-metafor 4.6-0-1 install ok installed r-cran-mets r-cran-mets 1.3.3+dfsg-1 install ok installed r-cran-mgcv r-cran-mgcv 1.9-1-1 install ok installed r-cran-mice r-cran-mice 3.16.0-1 install ok installed r-cran-microbenchmark r-cran-microbenchmark 1.5.0-1 install ok installed r-cran-mime r-cran-mime 0.12-2 install ok installed r-cran-miniui r-cran-miniui 0.1.1.1-3 install ok installed r-cran-minqa r-cran-minqa 1.2.8-1 install ok installed r-cran-misctools r-cran-misctools 0.6-28-1 install ok installed r-cran-mitml r-cran-mitml 0.4-5-1 install ok installed r-cran-mitools r-cran-mitools 2.4-2 install ok installed r-cran-mlbench r-cran-mlbench 2.1-5-1 install ok installed r-cran-mlmetrics r-cran-mlmetrics 1.1.3-1 install ok installed r-cran-mlmrev r-cran-mlmrev 1.0-8-2 install ok installed r-cran-mlr r-cran-mlr 2.19.1+dfsg-1 install ok installed r-cran-mnormt r-cran-mnormt 2.1.1-2 install ok installed r-cran-mockery r-cran-mockery 0.4.4+dfsg-1 install ok installed r-cran-modeldata r-cran-modeldata 1.4.0-1 install ok installed r-cran-modelmetrics r-cran-modelmetrics 1.2.2.2-1+b1 install ok installed r-cran-modelr r-cran-modelr 0.1.11-1 install ok installed r-cran-modeltools r-cran-modeltools 0.2-23-2 install ok installed r-cran-msm r-cran-msm 1.7.1-1 install ok installed r-cran-multcomp r-cran-multcomp 1.4-26-2 install ok installed r-cran-multcompview r-cran-multcompview 0.1-9-1 install ok installed r-cran-multicool r-cran-multicool 1.0.1-1 install ok installed r-cran-munsell r-cran-munsell 0.5.1-1 install ok installed r-cran-mvtnorm r-cran-mvtnorm 1.3-1-1 install ok installed r-cran-nanoarrow r-cran-nanoarrow 0.4.0-1 install ok installed r-cran-ncdf4 r-cran-ncdf4 1.22-1+b1 install ok installed r-cran-network r-cran-network 1.18.2-1 install ok installed r-cran-nleqslv r-cran-nleqslv 3.3.5-1 install ok installed r-cran-nlme r-cran-nlme 3.1.166-1 install ok installed r-cran-nloptr r-cran-nloptr 2.1.1-1 install ok installed r-cran-nmf r-cran-nmf 0.27-1 install ok installed r-cran-nnet r-cran-nnet 7.3-19-2 install ok installed r-cran-nnls r-cran-nnls 1.5-1 install ok installed r-cran-numderiv r-cran-numderiv 2016.8-1.1-3 install ok installed r-cran-openssl r-cran-openssl 2.2.0+dfsg-1 install ok installed r-cran-openxlsx r-cran-openxlsx 4.2.7-1 install ok installed r-cran-optimparallel r-cran-optimparallel 1.0-2-2 install ok installed r-cran-optimx r-cran-optimx 2023-10.21-1 install ok installed r-cran-ordinal r-cran-ordinal 2023.12-4-1 install ok installed r-cran-packrat r-cran-packrat 0.9.2-1 install ok installed r-cran-palmerpenguins r-cran-palmerpenguins 0.1.1-1 install ok installed r-cran-pammtools r-cran-pammtools 0.5.92-1 install ok installed r-cran-pan r-cran-pan 1.9-1 install ok installed r-cran-pander r-cran-pander 0.6.5+dfsg-3+deb12u1 install ok installed r-cran-parallelly r-cran-parallelly 1.38.0-1 install ok installed r-cran-parallelmap r-cran-parallelmap 1.5.1-1 install ok installed r-cran-paramhelpers r-cran-paramhelpers 1.14.1-1 install ok installed r-cran-party r-cran-party 1.3-17-1 install ok installed r-cran-partykit r-cran-partykit 1.2-20-1 install ok installed r-cran-patchwork r-cran-patchwork 1.2.0-1 install ok installed r-cran-patrick r-cran-patrick 0.2.0-2 install ok installed r-cran-pbapply r-cran-pbapply 1.7-2-1 install ok installed r-cran-pbivnorm r-cran-pbivnorm 0.6.0-4 install ok installed r-cran-pbkrtest r-cran-pbkrtest 0.5.3-1 install ok installed r-cran-pbmcapply r-cran-pbmcapply 1.5.1-1 install ok installed r-cran-pcapp r-cran-pcapp 2.0-5-1 install ok installed r-cran-pdftools r-cran-pdftools 3.4.0-1+b2 install ok installed r-cran-pec r-cran-pec 2023.04.12-1 install ok installed r-cran-permute r-cran-permute 0.9-7-1 install ok installed r-cran-phangorn r-cran-phangorn 2.11.1+dfsg-1 install ok installed r-cran-pillar r-cran-pillar 1.9.0+dfsg-1 install ok installed r-cran-pingr r-cran-pingr 2.0.3-1 install ok installed r-cran-pkgbuild r-cran-pkgbuild 1.4.4-1 install ok installed r-cran-pkgconfig r-cran-pkgconfig 2.0.3-2 install ok installed r-cran-pkgdown r-cran-pkgdown 2.0.7-2 install ok installed r-cran-pkgkitten r-cran-pkgkitten 0.2.4-1 install ok installed r-cran-pkgload r-cran-pkgload 1.4.0-1 install ok installed r-cran-pki r-cran-pki 0.1-12-2+b1 install ok installed r-cran-plm r-cran-plm 2.6-4-1 install ok installed r-cran-plogr r-cran-plogr 0.2.0-3 install ok installed r-cran-plotmo r-cran-plotmo 3.6.4-1 install ok installed r-cran-plotrix r-cran-plotrix 3.8-4-1 install ok installed r-cran-plumber r-cran-plumber 1.2.1+ds-2 install ok installed r-cran-plyr r-cran-plyr 1.8.9-1 install ok installed r-cran-png r-cran-png 0.1-8-1+b1 install ok installed r-cran-polspline r-cran-polspline 1.1.25-1 install ok installed r-cran-polyclip r-cran-polyclip 1.10-7-1 install ok installed r-cran-polycor r-cran-polycor 0.8-1-1 install ok installed r-cran-polynom r-cran-polynom 1.4-1+dfsg-1 install ok installed r-cran-poorman r-cran-poorman 0.2.7+dfsg-1 install ok installed r-cran-popepi r-cran-popepi 0.4.12+dfsg-1 install ok installed r-cran-posterior r-cran-posterior 1.5.0+dfsg-1 install ok installed r-cran-prabclus r-cran-prabclus 2.3-3-1 install ok installed r-cran-pracma r-cran-pracma 2.4.4-3 install ok installed r-cran-praise r-cran-praise 1.0.0-4 install ok installed r-cran-prettyunits r-cran-prettyunits 1.2.0-1 install ok installed r-cran-proc r-cran-proc 1.18.5-1 install ok installed r-cran-processx r-cran-processx 3.8.4-1 install ok installed r-cran-prodlim r-cran-prodlim 2024.06.25-1 install ok installed r-cran-profmem r-cran-profmem 0.6.0+dfsg-1 install ok installed r-cran-profvis r-cran-profvis 0.3.8+dfsg-1 install ok installed r-cran-progress r-cran-progress 1.2.3-1 install ok installed r-cran-progressr r-cran-progressr 0.14.0-1 install ok installed r-cran-projpred r-cran-projpred 2.8.0+dfsg-1 install ok installed r-cran-promises r-cran-promises 1.3.0+dfsg-1 install ok installed r-cran-proxy r-cran-proxy 0.4-27-1 install ok installed r-cran-ps r-cran-ps 1.7.7-1 install ok installed r-cran-pscl r-cran-pscl 1.5.9-1 install ok installed r-cran-psych r-cran-psych 2.4.1-1 install ok installed r-cran-psychtools r-cran-psychtools 2.4.2-1 install ok installed r-cran-publish r-cran-publish 2023.01.17-1 install ok installed r-cran-purrr r-cran-purrr 1.0.2-1 install ok installed r-cran-purrrlyr r-cran-purrrlyr 0.0.8-1 install ok installed r-cran-pvclust r-cran-pvclust 2.2-0-2 install ok installed r-cran-qap r-cran-qap 0.1-2-1 install ok installed r-cran-qpdf r-cran-qpdf 1.3.3+dfsg-1 install ok installed r-cran-qtl r-cran-qtl 1.70-1 install ok installed r-cran-quadprog r-cran-quadprog 1.5-8-1+b1 install ok installed r-cran-quantmod r-cran-quantmod 0.4.26-1 install ok installed r-cran-quantreg r-cran-quantreg 5.98-1 install ok installed r-cran-quickjsr r-cran-quickjsr 1.1.3-1 install ok installed r-cran-r.cache r-cran-r.cache 0.16.0-1 install ok installed r-cran-r.devices r-cran-r.devices 2.17.2+ds-1 install ok installed r-cran-r.methodss3 r-cran-r.methodss3 1.8.2-1 install ok installed r-cran-r.oo r-cran-r.oo 1.26.0-1 install ok installed r-cran-r.rsp r-cran-r.rsp 0.46.0+ds-1 install ok installed r-cran-r.utils r-cran-r.utils 2.12.3-1 install ok installed r-cran-r6 r-cran-r6 2.5.1-1 install ok installed r-cran-ragg r-cran-ragg 1.3.2-1 install ok installed r-cran-randomforest r-cran-randomforest 4.7-1.1-1 install ok installed r-cran-ranger r-cran-ranger 0.16.0-1 install ok installed r-cran-rann r-cran-rann 2.6.2-1 install ok installed r-cran-rappdirs r-cran-rappdirs 0.3.3-1 install ok installed r-cran-raster r-cran-raster 3.6-26-1 install ok installed r-cran-rbibutils r-cran-rbibutils 2.2.16-1 install ok installed r-cran-rcmdcheck r-cran-rcmdcheck 1.4.0-2 install ok installed r-cran-rcolorbrewer r-cran-rcolorbrewer 1.1-3-1 install ok installed r-cran-rcpp r-cran-rcpp 1.0.13-1 install ok installed r-cran-rcpparmadillo r-cran-rcpparmadillo 14.0.2-1-1 install ok installed r-cran-rcppeigen r-cran-rcppeigen 0.3.4.0.2-1 install ok installed r-cran-rcppml r-cran-rcppml 0.3.7-2 install ok installed r-cran-rcppparallel r-cran-rcppparallel 5.1.7+dfsg-5+b1 install ok installed r-cran-rcppprogress r-cran-rcppprogress 0.4.2-2 install ok installed r-cran-rcpproll r-cran-rcpproll 0.3.1-1 install ok installed r-cran-rcpptoml r-cran-rcpptoml 0.2.2+dfsg-1 install ok installed r-cran-rcsdp r-cran-rcsdp 0.1.57.5-1 install ok installed r-cran-rcurl r-cran-rcurl 1.98-1.16+dfsg-1 install ok installed r-cran-rdpack r-cran-rdpack 2.6.1-1 install ok installed r-cran-readr r-cran-readr 2.1.5-1 install ok installed r-cran-readxl r-cran-readxl 1.4.3-1 install ok installed r-cran-recipes r-cran-recipes 1.0.10+dfsg-2 install ok installed r-cran-registry r-cran-registry 0.5-1-2 install ok installed r-cran-relsurv r-cran-relsurv 2.2-9-1 install ok installed r-cran-rematch r-cran-rematch 2.0.0-1 install ok installed r-cran-rematch2 r-cran-rematch2 2.1.2-2 install ok installed r-cran-remotes r-cran-remotes 2.5.0+dfsg-1 install ok installed r-cran-renv r-cran-renv 1.0.7-1 install ok installed r-cran-repr r-cran-repr 1.1.7-1 install ok installed r-cran-reprex r-cran-reprex 2.1.0-1 install ok installed r-cran-reshape r-cran-reshape 0.8.9-1 install ok installed r-cran-reshape2 r-cran-reshape2 1.4.4-2 install ok installed r-cran-reticulate r-cran-reticulate 1.39.0+dfsg-1 install ok installed r-cran-rex r-cran-rex 1.2.1-1 install ok installed r-cran-rgl r-cran-rgl 1.3.1-1 install ok installed r-cran-rhpcblasctl r-cran-rhpcblasctl 0.23-42-1+b1 install ok installed r-cran-rio r-cran-rio 1.2.2-1 install ok installed r-cran-riskregression r-cran-riskregression 2023.12.21+ds-1 install ok installed r-cran-rlang r-cran-rlang 1.1.4-1 install ok installed r-cran-rmarkdown r-cran-rmarkdown 2.28+dfsg-1 install ok installed r-cran-rmpfr r-cran-rmpfr 0.9-5-1 install ok installed r-cran-rmpi r-cran-rmpi 0.7-2-2 install ok installed r-cran-rms r-cran-rms 6.8-2-1 install ok installed r-cran-rmysql r-cran-rmysql 0.10.28-1 install ok installed r-cran-rngtools r-cran-rngtools 1.5.2-1 install ok installed r-cran-robumeta r-cran-robumeta 2.1-1 install ok installed r-cran-robust r-cran-robust 0.7-4-1 install ok installed r-cran-robustbase r-cran-robustbase 0.99-4-1 install ok installed r-cran-rocr r-cran-rocr 1.0-11-3 install ok installed r-cran-rose r-cran-rose 0.0-4-2 install ok installed r-cran-roxygen2 r-cran-roxygen2 7.3.2-1 install ok installed r-cran-rpart r-cran-rpart 4.1.23-1 install ok installed r-cran-rpostgresql r-cran-rpostgresql 0.7-6+dfsg-1 install ok installed r-cran-rprojroot r-cran-rprojroot 2.0.4-1 install ok installed r-cran-rrcov r-cran-rrcov 1.7-6-1 install ok installed r-cran-rsample r-cran-rsample 1.2.1+dfsg-1 install ok installed r-cran-rsconnect r-cran-rsconnect 1.3.1-1 install ok installed r-cran-rsolnp r-cran-rsolnp 1.16+dfsg-4 install ok installed r-cran-rspectra r-cran-rspectra 0.16-1-1 install ok installed r-cran-rsqlite r-cran-rsqlite 2.3.7-2 install ok installed r-cran-rstan r-cran-rstan 2.32.5-2 install ok installed r-cran-rstanarm r-cran-rstanarm 2.32.1-2 install ok installed r-cran-rstantools r-cran-rstantools 2.4.0-1 install ok installed r-cran-rstatix r-cran-rstatix 0.7.2-1 install ok installed r-cran-rstudioapi r-cran-rstudioapi 0.16.0-1 install ok installed r-cran-rsvg r-cran-rsvg 2.6.0-1+b1 install ok installed r-cran-rtdists r-cran-rtdists 0.11-5-1 install ok installed r-cran-rtsne r-cran-rtsne 0.17-1 install ok installed r-cran-runit r-cran-runit 0.4.33-1 install ok installed r-cran-rversions r-cran-rversions 2.1.2-1 install ok installed r-cran-rvest r-cran-rvest 1.0.4-1 install ok installed r-cran-rwiener r-cran-rwiener 1.3-3-1+b1 install ok installed r-cran-sandwich r-cran-sandwich 3.1-1-1 install ok installed r-cran-sass r-cran-sass 0.4.9+dfsg-1 install ok installed r-cran-scales r-cran-scales 1.3.0-1 install ok installed r-cran-scatterplot3d r-cran-scatterplot3d 0.3-44-1 install ok installed r-cran-selectr r-cran-selectr 0.4-2-2 install ok installed r-cran-sendmailr r-cran-sendmailr 1.4-0-1 install ok installed r-cran-seriation r-cran-seriation 1.5.5-1 install ok installed r-cran-sessioninfo r-cran-sessioninfo 1.2.2-1 install ok installed r-cran-setrng r-cran-setrng 2022.4-1-1 install ok installed r-cran-sfsmisc r-cran-sfsmisc 1.1-18-1 install ok installed r-cran-shape r-cran-shape 1.4.6-1 install ok installed r-cran-shiny r-cran-shiny 1.8.1.1+dfsg-1 install ok installed r-cran-shinyjs r-cran-shinyjs 2.1.0-1 install ok installed r-cran-shinystan r-cran-shinystan 2.6.0-1 install ok installed r-cran-shinythemes r-cran-shinythemes 1.2.0+dfsg-1 install ok installed r-cran-sjlabelled r-cran-sjlabelled 1.2.0-1 install ok installed r-cran-slider r-cran-slider 0.3.1-1 install ok installed r-cran-sm r-cran-sm 2.2-6.0-1 install ok installed r-cran-smcfcs r-cran-smcfcs 1.7.1+dfsg-1 install ok installed r-cran-sna r-cran-sna 2.7-2-1 install ok installed r-cran-snakecase r-cran-snakecase 0.11.0-2 install ok installed r-cran-sodium r-cran-sodium 1.3.1+dfsg-1 install ok installed r-cran-sourcetools r-cran-sourcetools 0.1.7-1-1 install ok installed r-cran-sp r-cran-sp 1:2.1-2+dfsg-1 install ok installed r-cran-spam r-cran-spam 2.10-0-1 install ok installed r-cran-sparsem r-cran-sparsem 1.84-2-1+b1 install ok installed r-cran-spatial r-cran-spatial 7.3-17-1 install ok installed r-cran-spelling r-cran-spelling 2.3.0-1 install ok installed r-cran-splines2 r-cran-splines2 0.5.2-1 install ok installed r-cran-squarem r-cran-squarem 2021.1-1 install ok installed r-cran-stabledist r-cran-stabledist 0.7-2-1 install ok installed r-cran-stanheaders r-cran-stanheaders 2.32.5-1 install ok installed r-cran-statmod r-cran-statmod 1.5.0-1 install ok installed r-cran-statnet.common r-cran-statnet.common 4.9.0-1 install ok installed r-cran-stringi r-cran-stringi 1.8.4-1 install ok installed r-cran-stringr r-cran-stringr 1.5.1-1 install ok installed r-cran-strucchange r-cran-strucchange 1.5-4-1 install ok installed r-cran-survey r-cran-survey 4.2-1-1 install ok installed r-cran-survival r-cran-survival 3.7-0-1 install ok installed r-cran-svglite r-cran-svglite 2.1.3-1+b1 install ok installed r-cran-swagger r-cran-swagger 5.17.14-1 install ok installed r-cran-sys r-cran-sys 3.4.2-1 install ok installed r-cran-systemfit r-cran-systemfit 1.1-30-1 install ok installed r-cran-systemfonts r-cran-systemfonts 1.1.0-1 install ok installed r-cran-tensora r-cran-tensora 0.36.2.1-1 install ok installed r-cran-terra r-cran-terra 1.7-78-1 install ok installed r-cran-testit r-cran-testit 0.13-1 install ok installed r-cran-testthat r-cran-testthat 3.2.1.1-1 install ok installed r-cran-textshaping r-cran-textshaping 0.3.7-2 install ok installed r-cran-th.data r-cran-th.data 1.1-2-2 install ok installed r-cran-thematic r-cran-thematic 0.1.6-1 install ok installed r-cran-themis r-cran-themis 1.0.2-2 install ok installed r-cran-threejs r-cran-threejs 0.3.3+dfsg-2 install ok installed r-cran-tibble r-cran-tibble 3.2.1+dfsg-2 install ok installed r-cran-tidyr r-cran-tidyr 1.3.1-1 install ok installed r-cran-tidyselect r-cran-tidyselect 1.2.1+dfsg-1 install ok installed r-cran-tidyverse r-cran-tidyverse 2.0.0+dfsg-1 install ok installed r-cran-tikzdevice r-cran-tikzdevice 0.12.6-1 install ok installed r-cran-timechange r-cran-timechange 0.3.0-1 install ok installed r-cran-timedate r-cran-timedate 4032.109-1 install ok installed r-cran-timereg r-cran-timereg 2.0.5-1 install ok installed r-cran-timeseries r-cran-timeseries 4041.110-1 install ok installed r-cran-tinytest r-cran-tinytest 1.4.1-1 install ok installed r-cran-tinytex r-cran-tinytex 0.51-1 install ok installed r-cran-truncdist r-cran-truncdist 1.0-2-4 install ok installed r-cran-truncnorm r-cran-truncnorm 1.0-9-2 install ok installed r-cran-tseries r-cran-tseries 0.10-57-1 install ok installed r-cran-tsp r-cran-tsp 1.2-4-1 install ok installed r-cran-ttr r-cran-ttr 0.24.4-1 install ok installed r-cran-tufte r-cran-tufte 0.13-1 install ok installed r-cran-tweenr r-cran-tweenr 2.0.3-1 install ok installed r-cran-tzdb r-cran-tzdb 0.4.0-2 install ok installed r-cran-ucminf r-cran-ucminf 1.2.2-1 install ok installed r-cran-unitizer r-cran-unitizer 1.4.20-1 install ok installed r-cran-urca r-cran-urca 1.3-4-1 install ok installed r-cran-urlchecker r-cran-urlchecker 1.0.1-2 install ok installed r-cran-uroot r-cran-uroot 2.1-3-1 install ok installed r-cran-usethis r-cran-usethis 3.0.0-1 install ok installed r-cran-utf8 r-cran-utf8 1.2.4-1 install ok installed r-cran-uuid r-cran-uuid 1.2-1-1 install ok installed r-cran-v8 r-cran-v8 4.4.2+dfsg-1+b1 install ok installed r-cran-vcd r-cran-vcd 1:1.4-12-1 install ok installed r-cran-vctrs r-cran-vctrs 0.6.5-1 install ok installed r-cran-vdiffr r-cran-vdiffr 1.0.7-1+b1 install ok installed r-cran-vegan r-cran-vegan 2.6-8+dfsg-1 install ok installed r-cran-venndiagram r-cran-venndiagram 1.7.3-1 install ok installed r-cran-vgam r-cran-vgam 1.1-11-1 install ok installed r-cran-vioplot r-cran-vioplot 0.5.0-1 install ok installed r-cran-vipor r-cran-vipor 0.4.7-1 install ok installed r-cran-viridis r-cran-viridis 0.6.5-1 install ok installed r-cran-viridislite r-cran-viridislite 0.4.2-2 install ok installed r-cran-vroom r-cran-vroom 1.6.5-1 install ok installed r-cran-waldo r-cran-waldo 0.5.3-1 install ok installed r-cran-warp r-cran-warp 0.2.1-1 install ok installed r-cran-webfakes r-cran-webfakes 1.3.0-1 install ok installed r-cran-webshot r-cran-webshot 0.5.5-1 install ok installed r-cran-webutils r-cran-webutils 1.2.1-1 install ok installed r-cran-whisker r-cran-whisker 0.4.1-1 install ok installed r-cran-whoami r-cran-whoami 1.3.0-2 install ok installed r-cran-withr r-cran-withr 3.0.0+dfsg-1 install ok installed r-cran-writexl r-cran-writexl 1.5.0-1 install ok installed r-cran-xfun r-cran-xfun 0.47+dfsg-1 install ok installed r-cran-xml r-cran-xml 3.99-0.17-1 install ok installed r-cran-xml2 r-cran-xml2 1.3.6-1 install ok installed r-cran-xmlparsedata r-cran-xmlparsedata 1.0.5-2 install ok installed r-cran-xopen r-cran-xopen 1.0.1+dfsg-1 install ok installed r-cran-xtable r-cran-xtable 1:1.8-4-2 install ok installed r-cran-xts r-cran-xts 0.14.0-1 install ok installed r-cran-yaml r-cran-yaml 2.3.10-1 install ok installed r-cran-zeallot r-cran-zeallot 0.1.0-3 install ok installed r-cran-zip r-cran-zip 2.3.1-1 install ok installed r-cran-zoo r-cran-zoo 1.8-12-2 install ok installed r-doc-html r-doc-html 4.4.1-3 install ok installed r-other-mott-happy.hbrem r-other-mott-happy.hbrem 2.4-5 install ok installed r-recommended r-recommended 4.4.1-3 install ok installed rake rake 13.2.1-1 install ok installed raster3d raster3d 3.0-7-2+b1 install ok installed raxml raxml 8.2.13+dfsg-1+b1 install ok installed readline-common readline-common 8.2-5 install ok installed readseq readseq 1-15 install ok installed rnahybrid rnahybrid 2.1.2-8 install ok installed rpcsvc-proto rpcsvc-proto 1.4.3-1 install ok installed rtax rtax 0.984-8 install ok installed ruby ruby 1:3.1+nmu1 install ok installed ruby-net-telnet ruby-net-telnet 0.2.0-1 install ok installed ruby-rubygems ruby-rubygems 3.4.20-1 install ok installed ruby-sdbm:amd64 ruby-sdbm 1.0.0-5+b4 install ok installed ruby-webrick ruby-webrick 1.8.1-1 install ok installed ruby-xmlrpc ruby-xmlrpc 0.3.3-2 install ok installed ruby3.1 ruby3.1 3.1.2-8.4 install ok installed rubygems-integration rubygems-integration 1.18 install ok installed samtools samtools 1.20-3 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.24 install ok installed seqan-apps seqan-apps 2.4.0+dfsg-16 install ok installed sgml-base sgml-base 1.31 install ok installed shared-mime-info shared-mime-info 2.4-5 install ok installed sibsim4 sibsim4 0.20-5 install ok installed sigma-align sigma-align 1.1.3-9 install ok installed sim4 sim4 0.0.20121010-8 install ok installed smalt smalt 0.7.6-13 install ok installed snap snap 2013-11-29-11 install ok installed soapdenovo soapdenovo 1.05-6 install ok installed soapdenovo2 soapdenovo2 242+dfsg-4 install ok installed squizz squizz 0.99d+dfsg-3 install ok installed sra-toolkit sra-toolkit 3.0.3+dfsg-9 install ok installed ssake ssake 4.0.1-2 install ok installed sse4.2-support sse4.2-support 24 install ok installed staden-io-lib-utils staden-io-lib-utils 1.15.0-1.1+b1 install ok installed sysstat sysstat 12.7.5-2 install ok installed systemd systemd 256.6-1 install ok installed systemd-cryptsetup systemd-cryptsetup 256.6-1 install ok installed systemd-sysv systemd-sysv 256.6-1 install ok installed systemd-timesyncd systemd-timesyncd 256.6-1 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed t-coffee t-coffee 13.45.0.4846264+really13.41.0.28bdc39+dfsg-1 install ok installed t1utils t1utils 1.41-4 install ok installed tabix tabix 1.20+ds-1 install ok installed tar tar 1.35+dfsg-3 install ok installed tasksel tasksel 3.75 install ok installed tasksel-data tasksel-data 3.75 install ok installed tcl tcl 8.6.14 install ok installed tcl8.6 tcl8.6 8.6.14+dfsg-1 install ok installed tex-common tex-common 6.18 install ok installed texlive-base texlive-base 2024.20240829-2 install ok installed texlive-bibtex-extra texlive-bibtex-extra 2024.20240829-1 install ok installed texlive-binaries texlive-binaries 2024.20240313.70630+ds-4 install ok installed texlive-latex-base texlive-latex-base 2024.20240829-2 install ok installed theseus theseus 3.3.0-14+b1 install ok installed tigr-glimmer tigr-glimmer 3.02b-6+b1 install ok installed tk8.6-blt2.5 tk8.6-blt2.5 2.5.3+dfsg-7 install ok installed tm-align tm-align 20190822+dfsg-3 install ok installed tree-puzzle tree-puzzle 5.3~rc16+dfsg-10 install ok installed tree-puzzle-doc tree-puzzle-doc 5.3~rc16+dfsg-10 install ok installed ttf-bitstream-vera ttf-bitstream-vera 1.10-8.2 install ok installed tzdata tzdata 2024a-4 install ok installed ucf ucf 3.0043+nmu1 install ok installed unicode-data unicode-data 15.1.0-1 install ok installed unixodbc-common unixodbc-common 2.3.12-1 install ok installed unzip unzip 6.0-28 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-8 install ok installed va-driver-all:amd64 va-driver-all 2.22.0-1 install ok installed vcftools vcftools 0.1.16-3+b1 install ok installed vdpau-driver-all:amd64 vdpau-driver-all 1.5-3 install ok installed velvet velvet 1.2.10+dfsg1-9 install ok installed w3c-sgml-lib w3c-sgml-lib 1.3-3 install ok installed wise wise 2.4.1-25 install ok installed wise-data wise-data 2.4.1-25 install ok installed x11-common x11-common 1:7.7+23.1 install ok installed x11-utils x11-utils 7.7+7 install ok installed x11-xserver-utils x11-xserver-utils 7.7+10+b1 install ok installed xauth xauth 1:1.1.2-1 install ok installed xdg-user-dirs xdg-user-dirs 0.18-1 install ok installed xdg-utils xdg-utils 1.1.3-4.1 install ok installed xfonts-encodings xfonts-encodings 1:1.0.4-2.2 install ok installed xfonts-utils xfonts-utils 1:7.7+7 install ok installed xkb-data xkb-data 2.42-1 install ok installed xml-core xml-core 0.19 install ok installed xz-utils xz-utils 5.6.2-2 install ok installed zip zip 3.0-14 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 install ok installed zlib1g-dev:amd64 zlib1g-dev 1:1.3.dfsg+really1.3.1-1 install ok installed zutty zutty 0.16.1.20240818+dfsg1-1 12m53.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 12m53.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', 'remove', 'abyss', 'adduser', 'adwaita-icon-theme', 'aevol', 'alien-hunter', 'alsa-topology-conf', 'alsa-ucm-conf', 'altree', 'amap-align', 'apache2-bin', 'aragorn', 'arden', 'at-spi2-common', 'at-spi2-core', 'autodock', 'autodock-vina', 'autogrid', 'bamtools', 'bc', 'bcalm', 'bcftools', 'bedtools', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bioperl', 'bioperl-run', 'biosquid', 'blends-common', 'blt', 'bowtie', 'bowtie2', 'boxshade', 'bsdextrautils', 'build-essential', 'bwa', 'bzip2', 'bzip2-doc', 'ca-certificates', 'ca-certificates-java', 'cassiopee', 'cd-hit', 'cdbfasta', 'circos', 'circos-tools', 'clearcut', 'clonalframe', 'clustalo', 'clustalw', 'concavity', 'conservation-code', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'datamash', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jdk-headless', 'default-jre', 'default-jre-headless', 'dialign', 'dialign-tx', 'dialign-tx-data', 'dictionaries-common', 'dirmngr', 'discosnp', 'disulfinder', 'disulfinder-data', 'dmidecode', 'dmsetup', 'dnaclust', 'docutils-common', 'dpkg-dev', 'dssp', 'dvisvgm', 'emacsen-common', 'embassy-domainatrix', 'embassy-domalign', 'embassy-domsearch', 'emboss', 'emboss-data', 'emboss-lib', 'exonerate', 'fakeroot', 'fastdnaml', 'fastlink', 'fastqc', 'fasttree', 'file', 'fitgcp', 'flexbar', 'fontconfig', 'fontconfig-config', 'fonts-circos-symbols', 'fonts-cmu', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-droid-fallback', 'fonts-font-awesome', 'fonts-glyphicons-halflings', 'fonts-lato', 'fonts-liberation', 'fonts-liberation-sans-narrow', 'fonts-lmodern', 'fonts-lyx', 'fonts-mathjax', 'fonts-noto-mono', 'fonts-urw-base35', 'freecontact', 'fsa', 'g++-', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gasic', 'gatb-core', 'gawk', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'gdal-data', 'gdal-plugins:amd64', 'genometools', 'genometools-common', 'gff2aplot', 'gff2ps', 'gfortran', 'gfortran-14', 'gfortran-14-x86-64-linux-gnu', 'gfortran-x86-64-linux-gnu', 'ghostscript', 'glam2', 'gmap', 'gnupg', 'gnupg-l10n', 'gnupg-utils', 'gpg', 'gpg-agent', 'gpg-wks-client', 'gpgconf', 'gpgsm', 'graphicsmagick', 'graphviz', 'grinder', 'gromacs', 'gromacs-data', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hhsuite', 'hhsuite-data', 'hicolor-icon-theme', 'hisat2', 'hmmer', 'hunspell-en-gb', 'hunspell-en-us', 'i965-va-driver:amd64', 'ibverbs-providers:amd64', 'icu-devtools', 'idba', 'imagemagick', 'imagemagick-6-common', 'imagemagick-6.q16', 'infernal', 'intel-media-va-driver:amd64', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'java-wrappers', 'javascript-common', 'jellyfish', 'kalign', 'kissplice', 'krb5-locales', 'lagan', 'laptop-detect', 'last-align', 'lib32gcc-s1', 'lib32stdc++6', 'libaacs0:amd64', 'libabsl20230802:amd64', 'libace-perl', 'libaec0:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl:amd64', 'libalgorithm-merge-perl', 'libalgorithm-munkres-perl', 'libamd-comgr2:amd64', 'libamd3:amd64', 'libamdhip64-5', 'libann0', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache-pom-java', 'libapache2-mod-perl2', 'libapache2-reload-perl', 'libapparmor1:amd64', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libargtable2-0', 'libarmadillo14', 'libarpack2t64:amd64', 'libarray-compare-perl', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libass9:amd64', 'libassuan9:amd64', 'libasyncns0:amd64', 'libatinject-jsr330-api-java', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libauthen-sasl-perl', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavcodec61:amd64', 'libavfilter10:amd64', 'libavformat61:amd64', 'libavif16:amd64', 'libavutil59:amd64', 'libb-hooks-endofscope-perl', 'libb-hooks-op-check-perl:amd64', 'libbambamc0:amd64', 'libbamtools2.5.2:amd64', 'libbarclay-java', 'libbdplus0:amd64', 'libbibtex-parser-perl', 'libbinutils:amd64', 'libbio-asn1-entrezgene-perl', 'libbio-cluster-perl', 'libbio-eutilities-perl', 'libbio-featureio-perl', 'libbio-perl-perl', 'libbio-perl-run-perl', 'libbio-tools-run-remoteblast-perl', 'libbio-variation-perl', 'libbiojava-java', 'libbiojava1.9-java', 'libbit-vector-perl:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libbluray2:amd64', 'libboost-dev:amd64', 'libboost-filesystem1.83.0:amd64', 'libboost-mpi1.83.0', 'libboost-program-options1.83.0:amd64', 'libboost-serialization1.83.0:amd64', 'libboost-thread1.83.0:amd64', 'libboost1.83-dev:amd64', 'libbrotli1:amd64', 'libbs2b0:amd64', 'libbsd-resource-perl', 'libbytecode-java', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libc6-i386', 'libcache-cache-perl', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcapture-tiny-perl', 'libcares2:amd64', 'libcarp-always-perl', 'libcarp-clan-perl', 'libcassie1v5', 'libcbor0.10:amd64', 'libcc1-0:amd64', 'libcdt5:amd64', 'libcfitsio10t64:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcgraph6:amd64', 'libchromaprint1:amd64', 'libcifpp-data', 'libcifpp5:amd64', 'libcjson1:amd64', 'libclang-common-18-dev:amd64', 'libclang-cpp18', 'libclang-rt-18-dev:amd64', 'libclass-data-inheritable-perl', 'libclass-inspector-perl', 'libclass-method-modifiers-perl', 'libclass-xsaccessor-perl', 'libclc-18', 'libclc-18-dev', 'libclone-perl:amd64', 'libcloudproviders0:amd64', 'libcodec2-1.2:amd64', 'libcolamd3:amd64', 'libcolord2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-collections3-java', 'libcommons-compress-java', 'libcommons-dbcp-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libcommons-pool-java', 'libconfig-general-perl', 'libconvert-binary-c-perl', 'libconvert-binhex-perl', 'libcppunit-1.15-0:amd64', 'libcrypt-dev:amd64', 'libcrypt-rc4-perl', 'libcryptsetup12:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdata-dump-perl', 'libdata-dumper-simple-perl', 'libdata-stag-perl', 'libdate-calc-perl', 'libdate-calc-xs-perl:amd64', 'libdate-manip-perl', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbd-mysql-perl:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate-dev:amd64', 'libdeflate0:amd64', 'libdevel-callchecker-perl:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libdevmapper1.02.1:amd64', 'libdigest-perl-md5-perl', 'libdivsufsort3:amd64', 'libdjvulibre-text', 'libdjvulibre21:amd64', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdvdnav4:amd64', 'libdvdread8t64:amd64', 'libdynaloader-functions-perl', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1t64:amd64', 'libencode-locale-perl', 'libencode-perl:amd64', 'libepoxy0:amd64', 'liberror-perl', 'liberror-prone-java', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfabric1:amd64', 'libfakeroot:amd64', 'libfcgi-bin', 'libfcgi-perl', 'libfcgi0t64:amd64', 'libfftw3-double3:amd64', 'libfftw3-single3:amd64', 'libfido2-1:amd64', 'libfile-basedir-perl', 'libfile-desktopentry-perl', 'libfile-fcntllock-perl', 'libfile-listing-perl', 'libfile-mimeinfo-perl', 'libfile-slurp-tiny-perl', 'libfile-sort-perl', 'libfindbin-libs-perl', 'libflac12t64:amd64', 'libflite1:amd64', 'libfont-afm-perl', 'libfont-ttf-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreecontact0t64:amd64', 'libfreemarker-java', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfreezethaw-perl', 'libfribidi0:amd64', 'libfyba0t64:amd64', 'libg20', 'libgatbcore3:amd64', 'libgatk-native-bindings-java', 'libgav1-1:amd64', 'libgbm1:amd64', 'libgcc-14-dev:amd64', 'libgclib3:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdal35:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-bin', 'libgdk-pixbuf2.0-common', 'libgeos-c1t64:amd64', 'libgeos3.13.0:amd64', 'libgeotiff5:amd64', 'libgetopt-euclid-perl', 'libgetopt-simple-perl', 'libgflags2.2', 'libgfortran-14-dev:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgit2-1.7:amd64', 'libgkl-java', 'libgkl-jni', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libgles2:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglpk40:amd64', 'libglu1-mesa:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgme0:amd64', 'libgomp1:amd64', 'libgoogle-glog0v6t64', 'libgoogle-gson-java', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraph-perl', 'libgraphics-colornames-perl', 'libgraphics-colorobject-perl', 'libgraphicsmagick-q16-3t64', 'libgraphite2-3:amd64', 'libgraphviz-perl', 'libgromacs9:amd64', 'libgs-common', 'libgs10:amd64', 'libgs10-common', 'libgsl28:amd64', 'libgslcblas0:amd64', 'libgsm1:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgts-0.7-5t64:amd64', 'libgts-bin', 'libguava-java', 'libgumbo2:amd64', 'libgvc6', 'libgvpr2:amd64', 'libharfbuzz0b:amd64', 'libhdf4-0-alt:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libheap-perl', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhmsbeagle1v5:amd64', 'libhpdf-2.3.0:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhtml-form-perl', 'libhtml-format-perl', 'libhtml-parser-perl:amd64', 'libhtml-tableextract-perl', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhtsjdk-java', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libhttp-parser2.9:amd64', 'libhttpclient-java', 'libhttpcore-java', 'libhunspell-1.7-0:amd64', 'libhwasan0:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libhwy1t64:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'libice6:amd64', 'libicu-dev:amd64', 'libicu72:amd64', 'libidn12:amd64', 'libigdgmm12:amd64', 'libijs-0.35:amd64', 'libimagequant0:amd64', 'libimath-3-1-29t64:amd64', 'libimport-into-perl', 'libio-all-perl', 'libio-compress-brotli-perl', 'libio-html-perl', 'libio-pty-perl', 'libio-sessiondata-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libio-stringy-perl', 'libipc-run-perl', 'libipc-sharelite-perl', 'libipc-system-simple-perl', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjbig2dec0:amd64', 'libjbzip2-java', 'libjcode-pm-perl', 'libjellyfish-2.0-2:amd64', 'libjgraph-java', 'libjgrapht0.8-java', 'libjoptsimple-java', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-bootstrap', 'libjs-bootstrap4', 'libjs-bootswatch', 'libjs-d3', 'libjs-es5-shim', 'libjs-highlight.js', 'libjs-jquery', 'libjs-jquery-datatables', 'libjs-jquery-datatables-extensions', 'libjs-jquery-selectize.js', 'libjs-jquery-ui', 'libjs-json', 'libjs-lunr', 'libjs-mathjax', 'libjs-microplugin.js', 'libjs-modernizr', 'libjs-popper.js', 'libjs-prettify', 'libjs-remark-slide', 'libjs-sifter.js', 'libjs-sizzle', 'libjs-twitter-bootstrap-datepicker', 'libjs-underscore', 'libjson-c5:amd64', 'libjsoncpp25:amd64', 'libjsr305-java', 'libjxl0.9:amd64', 'libjxr-tools', 'libjxr0t64:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1t64:amd64', 'libkmldom1t64:amd64', 'libkmlengine1t64:amd64', 'libkmod2:amd64', 'libkpathsea6:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libksba8:amd64', 'liblab-gamut1:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'liblatex-tounicode-perl', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblightcouch-java', 'liblilv-0-0:amd64', 'liblist-allutils-perl', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'liblist-someutils-perl', 'liblist-someutils-xs-perl:amd64', 'liblist-utilsby-perl', 'libllvm17t64:amd64', 'libllvm18:amd64', 'libllvmspirvlib18.1:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblog4j2-java', 'liblqr-1-0:amd64', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.1-0:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'liblzma-dev:amd64', 'libmagic-mgc', 'libmagic1t64:amd64', 'libmagick++-6.q16-9t64:amd64', 'libmagickcore-6.q16-7-extra:amd64', 'libmagickcore-6.q16-7t64:amd64', 'libmagickwand-6.q16-7t64:amd64', 'libmailtools-perl', 'libmariadb3:amd64', 'libmath-bezier-perl', 'libmath-derivative-perl', 'libmath-random-mt-perl', 'libmath-round-perl', 'libmath-spline-perl', 'libmath-tamuanova-perl', 'libmath-vec-perl', 'libmath-vecstat-perl', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmime-tools-perl', 'libminizip1t64:amd64', 'libmjson-java', 'libmldbm-perl', 'libmodule-implementation-perl', 'libmodule-runtime-perl', 'libmongodb-java', 'libmoo-perl', 'libmp3lame0:amd64', 'libmpc3:amd64', 'libmpfi0:amd64', 'libmpfr6:amd64', 'libmpg123-0t64:amd64', 'libmujs3:amd64', 'libmunge2:amd64', 'libmuparser2v5:amd64', 'libmysofa1:amd64', 'libnamespace-clean-perl', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncbi-wvdb3:amd64', 'libncbi6t64:amd64', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnet-dbus-perl', 'libnet-http-perl', 'libnet-smtp-ssl-perl', 'libnet-ssleay-perl:amd64', 'libnetcdf19t64:amd64', 'libnetpbm11t64:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnlopt0:amd64', 'libnode115:amd64', 'libnorm1t64:amd64', 'libnpth0t64:amd64', 'libnsl2:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libnumber-format-perl', 'libodbc2:amd64', 'libodbcinst2:amd64', 'libogdi4.1:amd64', 'libogg0:amd64', 'libole-storage-lite-perl', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libopenexr-3-1-30:amd64', 'libopengl0:amd64', 'libopenjp2-7:amd64', 'libopenmpi3t64:amd64', 'libopenmpt0t64:amd64', 'libopus0:amd64', 'libpackage-stash-perl', 'libpackage-stash-xs-perl:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libparams-classify-perl:amd64', 'libparams-validate-perl:amd64', 'libparse-recdescent-perl', 'libpathplan4:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpcre2-32-0:amd64', 'libpcre2-dev:amd64', 'libpcre2-posix3:amd64', 'libpcsclite1:amd64', 'libperl4-corelibs-perl', 'libperl5.38t64:amd64', 'libpgm-5.3-0t64:amd64', 'libpicard-java', 'libpixman-1-0:amd64', 'libpkgconf3:amd64', 'libplacebo349:amd64', 'libpmix2t64:amd64', 'libpng-dev:amd64', 'libpng-tools', 'libpng16-16t64:amd64', 'libpocketsphinx3:amd64', 'libpod-coverage-perl', 'libpod-parser-perl', 'libpoppler-cpp1:amd64', 'libpoppler140:amd64', 'libpostproc58:amd64', 'libpostscript-perl', 'libpotrace0:amd64', 'libpq5:amd64', 'libproc2-0:amd64', 'libproj25:amd64', 'libpsl5t64:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptexenc1:amd64', 'libpulse0:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqhull-r8.0:amd64', 'libqpdf29t64:amd64', 'libquadmath0:amd64', 'librabbitmq4:amd64', 'libraqm0:amd64', 'librav1e0.7:amd64', 'libraw23t64:amd64', 'librdmacm1t64:amd64', 'libre2-11:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'libreadonly-perl', 'libref-util-perl', 'libref-util-xs-perl', 'libregexp-common-perl', 'librhino-java', 'librist4:amd64', 'librole-tiny-perl', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'librtmp1:amd64', 'librttopo1:amd64', 'librubberband2:amd64', 'libruby:amd64', 'libruby3.1t64:amd64', 'libsamplerate0:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libserd-0-0:amd64', 'libset-intspan-perl', 'libset-object-perl', 'libset-scalar-perl', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libshine3:amd64', 'libsigsegv2:amd64', 'libslf4j-java', 'libsm6:amd64', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsndfile1:amd64', 'libsoap-lite-perl', 'libsodium23:amd64', 'libsord-0-0:amd64', 'libsort-naturally-perl', 'libsoxr0:amd64', 'libspatialite8t64:amd64', 'libspeex1:amd64', 'libsphinxbase3t64:amd64', 'libspiffy-perl', 'libspreadsheet-parseexcel-perl', 'libspreadsheet-writeexcel-perl', 'libsprng2', 'libsqlite3-0:amd64', 'libsquid1t64:amd64', 'libsquizz', 'libsratom-0-0:amd64', 'libsrt1.5-gnutls:amd64', 'libssh-4:amd64', 'libssh2-1t64:amd64', 'libstaden-read14t64:amd64', 'libstatistics-basic-perl', 'libstatistics-descriptive-perl', 'libstdc++-14-dev:amd64', 'libsub-exporter-progressive-perl', 'libsub-identify-perl', 'libsub-name-perl:amd64', 'libsub-quote-perl', 'libsub-uplevel-perl', 'libsuitesparseconfig7:amd64', 'libsuperlu6:amd64', 'libsvg-graph-perl', 'libsvg-perl', 'libsvtav1enc2:amd64', 'libswresample5:amd64', 'libswscale8:amd64', 'libsynctex2:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libtamuanova-0.2', 'libtask-weaken-perl', 'libtbb-dev:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libteckit0:amd64', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-pod-perl', 'libtest-requiresinternet-perl', 'libtest-warn-perl', 'libtexlua53-5:amd64', 'libtext-csv-perl', 'libtext-csv-xs-perl:amd64', 'libtext-diff-perl', 'libtext-format-perl', 'libtext-iconv-perl:amd64', 'libthai-data', 'libthai0:amd64', 'libtheora0:amd64', 'libtie-ixhash-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtre5:amd64', 'libtree-dagnode-perl', 'libtry-tiny-perl', 'libtsan2:amd64', 'libtwolame0:amd64', 'libtype-tiny-perl', 'libtype-tiny-xs-perl:amd64', 'libubsan1:amd64', 'libucx0:amd64', 'libudfread0:amd64', 'libunibreak6:amd64', 'libunicode-map-perl', 'libunwind8:amd64', 'liburi-perl', 'liburiparser1:amd64', 'libuv1t64:amd64', 'libva-drm2:amd64', 'libva-x11-2:amd64', 'libva2:amd64', 'libvariable-magic-perl', 'libvdpau-va-gl1:amd64', 'libvdpau1:amd64', 'libvidstab1.1:amd64', 'libvorbis0a:amd64', 'libvorbisenc2:amd64', 'libvorbisfile3:amd64', 'libvpl2', 'libvpx9:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwmflite-0.2-7:amd64', 'libwoff1:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx11-protocol-perl', 'libx11-xcb1:amd64', 'libx264-164:amd64', 'libx265-209:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces-c3.2t64:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-dom-perl', 'libxml-dom-xpath-perl', 'libxml-filter-buffertext-perl', 'libxml-libxml-perl', 'libxml-libxslt-perl:amd64', 'libxml-namespacesupport-perl', 'libxml-parser-perl', 'libxml-perl', 'libxml-regexp-perl', 'libxml-sax-base-perl', 'libxml-sax-expat-perl', 'libxml-sax-perl', 'libxml-sax-writer-perl', 'libxml-simple-perl', 'libxml-twig-perl', 'libxml-writer-perl', 'libxml-xpath-perl', 'libxml-xpathengine-perl', 'libxml2:amd64', 'libxmlrpc-lite-perl', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxnvctrl0:amd64', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxstring-perl:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxvidcore4:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyaml-libyaml-perl', 'libyaml-perl', 'libyuv0:amd64', 'libz3-4:amd64', 'libzimg2:amd64', 'libzix-0-0:amd64', 'libzmq5:amd64', 'libzvbi-common', 'libzvbi0t64:amd64', 'libzzip-0-13t64:amd64', 'linux-libc-dev', 'linux-sysctl-defaults', 'littler', 'lmodern', 'loki', 'lua-filesystem:amd64', 'lua-lpeg:amd64', 'lua-md5:amd64', 'luit', 'lynx', 'lynx-common', 'macs', 'mafft', 'mailcap', 'make', 'manpages', 'manpages-dev', 'mapsembler2', 'maq', 'mariadb-common', 'med-config', 'med-tasks', 'media-types', 'melting', 'menu', 'mesa-libgallium:amd64', 'mesa-opencl-icd:amd64', 'mesa-va-drivers:amd64', 'mesa-vdpau-drivers:amd64', 'mesa-vulkan-drivers:amd64', 'minia', 'mipe', 'mira-assembler', 'mira-rfam-12s-rrna', 'mlv-smile', 'mothur', 'mpi-default-bin', 'mrbayes', 'mummer', 'mupdf-tools', 'muscle', 'mustang', 'mysql-common', 'ncbi-blast+-', 'ncbi-blast+-legacy', 'ncbi-data', 'ncbi-epcr', 'ncbi-tools-bin', 'ncbi-vdb-data', 'ncoils', 'neobio', 'netbase', 'netpbm', 'node-acorn', 'node-balanced-match', 'node-bootstrap-sass', 'node-brace-expansion', 'node-cjs-module-lexer', 'node-highlight.js', 'node-html5shiv', 'node-jquery', 'node-jquery-ui', 'node-minimatch', 'node-normalize.css', 'node-undici', 'node-xtend', 'nodejs', 'nodejs-doc', 'ocl-icd-libopencl1:amd64', 'openjdk-21-jdk-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssl', 'pal2nal', 'paml', 'pandoc', 'pandoc-data', 'paraclu', 'parallel', 'parsinsert', 'patch', 'pdb2pqr', 'perl', 'perl-doc', 'perl-modules-5.38', 'perl-openssl-defaults:amd64', 'perl-tk', 'perm', 'phylip', 'phyml', 'phyutility', 'picard-tools', 'pinentry-curses', 'pkgconf:amd64', 'pkgconf-bin', 'plink', 'plink1.9', 'plink2', 'poa', 'pocketsphinx-en-us', 'poppler-data', 'prank', 'prime-phylo', 'primer3', 'probabel', 'probalign', 'probcons', 'procps', 'proda', 'prodigal', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python-babel-localedata', 'python-biopython-doc', 'python-matplotlib-data', 'python3', 'python3-appdirs', 'python3-argcomplete', 'python3-argh', 'python3-attr', 'python3-autocommand', 'python3-babel', 'python3-biomaj3-cli', 'python3-biomaj3-core', 'python3-biopython', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-cykhash', 'python3-dateutil', 'python3-decorator', 'python3-docutils', 'python3-elasticsearch', 'python3-fonttools', 'python3-freetype', 'python3-fs', 'python3-gffutils', 'python3-hisat2', 'python3-hmmlearn', 'python3-html5lib', 'python3-htseq', 'python3-idna', 'python3-importlib-metadata', 'python3-inflect', 'python3-iniconfig', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jinja2', 'python3-joblib', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-numpy', 'python3-olefile', 'python3-packaging', 'python3-pdb2pqr', 'python3-pdbx', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-pluggy', 'python3-propka', 'python3-psutil', 'python3-pybedtools', 'python3-pyfaidx', 'python3-pygments', 'python3-pyparsing', 'python3-pysam', 'python3-pytest', 'python3-reportlab', 'python3-requests', 'python3-rlpycairo', 'python3-roman', 'python3-rpy2', 'python3-scipy', 'python3-simplejson', 'python3-six', 'python3-sklearn', 'python3-sklearn-lib:amd64', 'python3-soupsieve', 'python3-sympy', 'python3-threadpoolctl', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-tzlocal', 'python3-ufolib2', 'python3-unicodedata2', 'python3-urllib3', 'python3-webencodings', 'python3-zipp', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'r-base-core', 'r-base-dev', 'r-bioc-biobase', 'r-bioc-biocgenerics', 'r-bioc-biocstyle', 'r-bioc-biocversion', 'r-bioc-edger', 'r-bioc-graph', 'r-bioc-hilbertvis', 'r-bioc-limma', 'r-cran-abind', 'r-cran-acepack', 'r-cran-actuar', 'r-cran-admisc', 'r-cran-aer', 'r-cran-afex', 'r-cran-amelia', 'r-cran-ape', 'r-cran-arm', 'r-cran-askpass', 'r-cran-av', 'r-cran-backports', 'r-cran-base64enc', 'r-cran-base64url', 'r-cran-batchjobs', 'r-cran-batchtools', 'r-cran-bayesfactor', 'r-cran-bayesplot', 'r-cran-bbmisc', 'r-cran-bbmle', 'r-cran-bdsmatrix', 'r-cran-beeswarm', 'r-cran-bench', 'r-cran-bh', 'r-cran-biasedurn', 'r-cran-biocmanager', 'r-cran-bit', 'r-cran-bit64', 'r-cran-bitops', 'r-cran-blme', 'r-cran-blob', 'r-cran-bookdown', 'r-cran-boot', 'r-cran-brew', 'r-cran-brglm2', 'r-cran-bridgesampling', 'r-cran-brio', 'r-cran-brms', 'r-cran-brobdingnag', 'r-cran-broom', 'r-cran-broom.helpers', 'r-cran-broom.mixed', 'r-cran-bslib', 'r-cran-ca', 'r-cran-cachem', 'r-cran-cairo', 'r-cran-callr', 'r-cran-car', 'r-cran-cardata', 'r-cran-caret', 'r-cran-catools', 'r-cran-cba', 'r-cran-cellranger', 'r-cran-checkmate', 'r-cran-chk', 'r-cran-chron', 'r-cran-class', 'r-cran-cli', 'r-cran-clipr', 'r-cran-clock', 'r-cran-clubsandwich', 'r-cran-cluster', 'r-cran-cmprsk', 'r-cran-coda', 'r-cran-codetools', 'r-cran-coin', 'r-cran-collapse', 'r-cran-colorspace', 'r-cran-colourpicker', 'r-cran-commonmark', 'r-cran-conflicted', 'r-cran-conquer', 'r-cran-contfrac', 'r-cran-corrplot', 'r-cran-covr', 'r-cran-cowplot', 'r-cran-cpp11', 'r-cran-crayon', 'r-cran-credentials', 'r-cran-crosstalk', 'r-cran-curl', 'r-cran-cvar', 'r-cran-cvst', 'r-cran-cyclocomp', 'r-cran-data.table', 'r-cran-datawizard', 'r-cran-date', 'r-cran-dbi', 'r-cran-dbitest', 'r-cran-dbplyr', 'r-cran-dbscan', 'r-cran-ddalpha', 'r-cran-decor', 'r-cran-deldir', 'r-cran-dendextend', 'r-cran-deoptimr', 'r-cran-deriv', 'r-cran-desc', 'r-cran-desolve', 'r-cran-devtools', 'r-cran-dfoptim', 'r-cran-diagram', 'r-cran-dials', 'r-cran-dicedesign', 'r-cran-dichromat', 'r-cran-diffobj', 'r-cran-digest', 'r-cran-dimred', 'r-cran-diptest', 'r-cran-distributional', 'r-cran-doby', 'r-cran-docopt', 'r-cran-domc', 'r-cran-doparallel', 'r-cran-dorng', 'r-cran-dotcall64', 'r-cran-downlit', 'r-cran-dplyr', 'r-cran-drr', 'r-cran-dt', 'r-cran-dtplyr', 'r-cran-dygraphs', 'r-cran-dynlm', 'r-cran-e1071', 'r-cran-eaf', 'r-cran-earth', 'r-cran-effects', 'r-cran-ellipse', 'r-cran-ellipsis', 'r-cran-elliptic', 'r-cran-emdbook', 'r-cran-emmeans', 'r-cran-emoa', 'r-cran-energy', 'r-cran-enrichwith', 'r-cran-epi', 'r-cran-estimability', 'r-cran-etm', 'r-cran-evaluate', 'r-cran-evd', 'r-cran-expint', 'r-cran-expm', 'r-cran-extradistr', 'r-cran-fansi', 'r-cran-farver', 'r-cran-fastica', 'r-cran-fastmap', 'r-cran-fastmatch', 'r-cran-fbasics', 'r-cran-fgarch', 'r-cran-fields', 'r-cran-filehash', 'r-cran-fit.models', 'r-cran-flexmix', 'r-cran-fnn', 'r-cran-fontawesome', 'r-cran-fontbitstreamvera', 'r-cran-fontliberation', 'r-cran-fontquiver', 'r-cran-forcats', 'r-cran-foreach', 'r-cran-forecast', 'r-cran-foreign', 'r-cran-formatr', 'r-cran-formattable', 'r-cran-formula', 'r-cran-fpc', 'r-cran-fracdiff', 'r-cran-fs', 'r-cran-furrr', 'r-cran-futile.logger', 'r-cran-futile.options', 'r-cran-future', 'r-cran-future.apply', 'r-cran-g.data', 'r-cran-gam', 'r-cran-gamm4', 'r-cran-gargle', 'r-cran-gbrd', 'r-cran-gbutils', 'r-cran-gclus', 'r-cran-gdata', 'r-cran-gee', 'r-cran-geepack', 'r-cran-generics', 'r-cran-geometry', 'r-cran-geosphere', 'r-cran-gert', 'r-cran-ggally', 'r-cran-gganimate', 'r-cran-ggbeeswarm', 'r-cran-ggeffects', 'r-cran-ggforce', 'r-cran-ggfortify', 'r-cran-ggplot2', 'r-cran-ggpubr', 'r-cran-ggrepel', 'r-cran-ggridges', 'r-cran-ggsci', 'r-cran-ggsignif', 'r-cran-ggstats', 'r-cran-gh', 'r-cran-git2r', 'r-cran-gitcreds', 'r-cran-glmnet', 'r-cran-globals', 'r-cran-glue', 'r-cran-gmm', 'r-cran-gmp', 'r-cran-googledrive', 'r-cran-googlesheets4', 'r-cran-gower', 'r-cran-gparotation', 'r-cran-gplots', 'r-cran-gridbase', 'r-cran-gridextra', 'r-cran-gridgraphics', 'r-cran-gridsvg', 'r-cran-gsl', 'r-cran-gss', 'r-cran-gtable', 'r-cran-gtools', 'r-cran-hardhat', 'r-cran-haven', 'r-cran-here', 'r-cran-hexbin', 'r-cran-highr', 'r-cran-hmisc', 'r-cran-hms', 'r-cran-hsaur3', 'r-cran-htmltable', 'r-cran-htmltools', 'r-cran-htmlwidgets', 'r-cran-httptest2', 'r-cran-httpuv', 'r-cran-httr', 'r-cran-httr2', 'r-cran-hunspell', 'r-cran-hypergeo', 'r-cran-ids', 'r-cran-igraph', 'r-cran-ini', 'r-cran-inline', 'r-cran-insight', 'r-cran-intergraph', 'r-cran-interp', 'r-cran-inum', 'r-cran-ipred', 'r-cran-irace', 'r-cran-irdisplay', 'r-cran-irlba', 'r-cran-isoband', 'r-cran-iterators', 'r-cran-itertools', 'r-cran-janeaustenr', 'r-cran-jomo', 'r-cran-jpeg', 'r-cran-jquerylib', 'r-cran-jsonlite', 'r-cran-kableextra', 'r-cran-kernlab', 'r-cran-kernsmooth', 'r-cran-kmi', 'r-cran-knitr', 'r-cran-ks', 'r-cran-labeling', 'r-cran-labelled', 'r-cran-lambda.r', 'r-cran-later', 'r-cran-lattice', 'r-cran-latticeextra', 'r-cran-lava', 'r-cran-lavaan', 'r-cran-lavasearch2', 'r-cran-lazyeval', 'r-cran-lbfgsb3c', 'r-cran-leaps', 'r-cran-lhs', 'r-cran-libcoin', 'r-cran-lifecycle', 'r-cran-linprog', 'r-cran-lintr', 'r-cran-listenv', 'r-cran-littler', 'r-cran-lme4', 'r-cran-lmertest', 'r-cran-lmtest', 'r-cran-lobstr', 'r-cran-locfit', 'r-cran-logcondens', 'r-cran-logspline', 'r-cran-loo', 'r-cran-lpsolve', 'r-cran-lsmeans', 'r-cran-lubridate', 'r-cran-magic', 'r-cran-magick', 'r-cran-magrittr', 'r-cran-mapdata', 'r-cran-mapproj', 'r-cran-maps', 'r-cran-marginaleffects', 'r-cran-markdown', 'r-cran-mass', 'r-cran-matchit', 'r-cran-mathjaxr', 'r-cran-matrix', 'r-cran-matrixmodels', 'r-cran-matrixstats', 'r-cran-maxlik', 'r-cran-mclogit', 'r-cran-mclust', 'r-cran-mda', 'r-cran-memisc', 'r-cran-memoise', 'r-cran-metadat', 'r-cran-metafor', 'r-cran-mets', 'r-cran-mgcv', 'r-cran-mice', 'r-cran-microbenchmark', 'r-cran-mime', 'r-cran-miniui', 'r-cran-minqa', 'r-cran-misctools', 'r-cran-mitml', 'r-cran-mitools', 'r-cran-mlbench', 'r-cran-mlmetrics', 'r-cran-mlmrev', 'r-cran-mlr', 'r-cran-mnormt', 'r-cran-mockery', 'r-cran-modeldata', 'r-cran-modelmetrics', 'r-cran-modelr', 'r-cran-modeltools', 'r-cran-msm', 'r-cran-multcomp', 'r-cran-multcompview', 'r-cran-multicool', 'r-cran-munsell', 'r-cran-mvtnorm', 'r-cran-nanoarrow', 'r-cran-ncdf4', 'r-cran-network', 'r-cran-nleqslv', 'r-cran-nlme', 'r-cran-nloptr', 'r-cran-nmf', 'r-cran-nnet', 'r-cran-nnls', 'r-cran-numderiv', 'r-cran-openssl', 'r-cran-openxlsx', 'r-cran-optimparallel', 'r-cran-optimx', 'r-cran-ordinal', 'r-cran-packrat', 'r-cran-palmerpenguins', 'r-cran-pammtools', 'r-cran-pan', 'r-cran-pander', 'r-cran-parallelly', 'r-cran-parallelmap', 'r-cran-paramhelpers', 'r-cran-party', 'r-cran-partykit', 'r-cran-patchwork', 'r-cran-patrick', 'r-cran-pbapply', 'r-cran-pbivnorm', 'r-cran-pbkrtest', 'r-cran-pbmcapply', 'r-cran-pcapp', 'r-cran-pdftools', 'r-cran-pec', 'r-cran-permute', 'r-cran-phangorn', 'r-cran-pillar', 'r-cran-pingr', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgdown', 'r-cran-pkgkitten', 'r-cran-pkgload', 'r-cran-pki', 'r-cran-plm', 'r-cran-plogr', 'r-cran-plotmo', 'r-cran-plotrix', 'r-cran-plumber', 'r-cran-plyr', 'r-cran-png', 'r-cran-polspline', 'r-cran-polyclip', 'r-cran-polycor', 'r-cran-polynom', 'r-cran-poorman', 'r-cran-popepi', 'r-cran-posterior', 'r-cran-prabclus', 'r-cran-pracma', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-proc', 'r-cran-processx', 'r-cran-prodlim', 'r-cran-profmem', 'r-cran-profvis', 'r-cran-progress', 'r-cran-progressr', 'r-cran-projpred', 'r-cran-promises', 'r-cran-proxy', 'r-cran-ps', 'r-cran-pscl', 'r-cran-psych', 'r-cran-psychtools', 'r-cran-publish', 'r-cran-purrr', 'r-cran-purrrlyr', 'r-cran-pvclust', 'r-cran-qap', 'r-cran-qpdf', 'r-cran-qtl', 'r-cran-quadprog', 'r-cran-quantmod', 'r-cran-quantreg', 'r-cran-quickjsr', 'r-cran-r.cache', 'r-cran-r.devices', 'r-cran-r.methodss3', 'r-cran-r.oo', 'r-cran-r.rsp', 'r-cran-r.utils', 'r-cran-r6', 'r-cran-ragg', 'r-cran-randomforest', 'r-cran-ranger', 'r-cran-rann', 'r-cran-rappdirs', 'r-cran-raster', 'r-cran-rbibutils', 'r-cran-rcmdcheck', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rcpparmadillo', 'r-cran-rcppeigen', 'r-cran-rcppml', 'r-cran-rcppparallel', 'r-cran-rcppprogress', 'r-cran-rcpproll', 'r-cran-rcpptoml', 'r-cran-rcsdp', 'r-cran-rcurl', 'r-cran-rdpack', 'r-cran-readr', 'r-cran-readxl', 'r-cran-recipes', 'r-cran-registry', 'r-cran-relsurv', 'r-cran-rematch', 'r-cran-rematch2', 'r-cran-remotes', 'r-cran-renv', 'r-cran-repr', 'r-cran-reprex', 'r-cran-reshape', 'r-cran-reshape2', 'r-cran-reticulate', 'r-cran-rex', 'r-cran-rgl', 'r-cran-rhpcblasctl', 'r-cran-rio', 'r-cran-riskregression', 'r-cran-rlang', 'r-cran-rmarkdown', 'r-cran-rmpfr', 'r-cran-rmpi', 'r-cran-rms', 'r-cran-rmysql', 'r-cran-rngtools', 'r-cran-robumeta', 'r-cran-robust', 'r-cran-robustbase', 'r-cran-rocr', 'r-cran-rose', 'r-cran-roxygen2', 'r-cran-rpart', 'r-cran-rpostgresql', 'r-cran-rprojroot', 'r-cran-rrcov', 'r-cran-rsample', 'r-cran-rsconnect', 'r-cran-rsolnp', 'r-cran-rspectra', 'r-cran-rsqlite', 'r-cran-rstan', 'r-cran-rstanarm', 'r-cran-rstantools', 'r-cran-rstatix', 'r-cran-rstudioapi', 'r-cran-rsvg', 'r-cran-rtdists', 'r-cran-rtsne', 'r-cran-runit', 'r-cran-rversions', 'r-cran-rvest', 'r-cran-rwiener', 'r-cran-sandwich', 'r-cran-sass', 'r-cran-scales', 'r-cran-scatterplot3d', 'r-cran-selectr', 'r-cran-sendmailr', 'r-cran-seriation', 'r-cran-sessioninfo', 'r-cran-setrng', 'r-cran-sfsmisc', 'r-cran-shape', 'r-cran-shiny', 'r-cran-shinyjs', 'r-cran-shinystan', 'r-cran-shinythemes', 'r-cran-sjlabelled', 'r-cran-slider', 'r-cran-sm', 'r-cran-smcfcs', 'r-cran-sna', 'r-cran-snakecase', 'r-cran-sodium', 'r-cran-sourcetools', 'r-cran-sp', 'r-cran-spam', 'r-cran-sparsem', 'r-cran-spatial', 'r-cran-spelling', 'r-cran-splines2', 'r-cran-squarem', 'r-cran-stabledist', 'r-cran-stanheaders', 'r-cran-statmod', 'r-cran-statnet.common', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-strucchange', 'r-cran-survey', 'r-cran-survival', 'r-cran-svglite', 'r-cran-swagger', 'r-cran-sys', 'r-cran-systemfit', 'r-cran-systemfonts', 'r-cran-tensora', 'r-cran-terra', 'r-cran-testit', 'r-cran-testthat', 'r-cran-textshaping', 'r-cran-th.data', 'r-cran-thematic', 'r-cran-themis', 'r-cran-threejs', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-tidyverse', 'r-cran-tikzdevice', 'r-cran-timechange', 'r-cran-timedate', 'r-cran-timereg', 'r-cran-timeseries', 'r-cran-tinytest', 'r-cran-tinytex', 'r-cran-truncdist', 'r-cran-truncnorm', 'r-cran-tseries', 'r-cran-tsp', 'r-cran-ttr', 'r-cran-tufte', 'r-cran-tweenr', 'r-cran-tzdb', 'r-cran-ucminf', 'r-cran-unitizer', 'r-cran-urca', 'r-cran-urlchecker', 'r-cran-uroot', 'r-cran-usethis', 'r-cran-utf8', 'r-cran-uuid', 'r-cran-v8', 'r-cran-vcd', 'r-cran-vctrs', 'r-cran-vdiffr', 'r-cran-vegan', 'r-cran-venndiagram', 'r-cran-vgam', 'r-cran-vioplot', 'r-cran-vipor', 'r-cran-viridis', 'r-cran-viridislite', 'r-cran-vroom', 'r-cran-waldo', 'r-cran-warp', 'r-cran-webfakes', 'r-cran-webshot', 'r-cran-webutils', 'r-cran-whisker', 'r-cran-whoami', 'r-cran-withr', 'r-cran-writexl', 'r-cran-xfun', 'r-cran-xml', 'r-cran-xml2', 'r-cran-xmlparsedata', 'r-cran-xopen', 'r-cran-xtable', 'r-cran-xts', 'r-cran-yaml', 'r-cran-zeallot', 'r-cran-zip', 'r-cran-zoo', 'r-doc-html', 'r-other-mott-happy.hbrem', 'r-recommended', 'rake', 'raster3d', 'raxml', 'readline-common', 'readseq', 'rnahybrid', 'rpcsvc-proto', 'rtax', 'ruby', 'ruby-net-telnet', 'ruby-rubygems', 'ruby-sdbm:amd64', 'ruby-webrick', 'ruby-xmlrpc', 'ruby3.1', 'rubygems-integration', 'samtools', 'sensible-utils', 'seqan-apps', 'sgml-base', 'shared-mime-info', 'sibsim4', 'sigma-align', 'sim4', 'smalt', 'snap', 'soapdenovo', 'soapdenovo2', 'squizz', 'sra-toolkit', 'ssake', 'sse4.2-support', 'staden-io-lib-utils', 'sysstat', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 't-coffee', 't1utils', 'tabix', 'tasksel', 'tasksel-data', 'tcl', 'tcl8.6', 'tex-common', 'texlive-base', 'texlive-bibtex-extra', 'texlive-binaries', 'texlive-latex-base', 'theseus', 'tigr-glimmer', 'tk8.6-blt2.5', 'tm-align', 'tree-puzzle', 'tree-puzzle-doc', 'ttf-bitstream-vera', 'ucf', 'unicode-data', 'unixodbc-common', 'unzip', 'va-driver-all:amd64', 'vcftools', 'vdpau-driver-all:amd64', 'velvet', 'w3c-sgml-lib', 'wise', 'wise-data', 'x11-common', 'x11-utils', 'x11-xserver-utils', 'xauth', 'xdg-user-dirs', 'xdg-utils', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xml-core', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'zutty', 'med-cloud'] 14m14.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: abyss adduser adwaita-icon-theme aevol alien-hunter alsa-topology-conf alsa-ucm-conf altree amap-align apache2-bin aragorn arden at-spi2-common at-spi2-core autodock autodock-vina autogrid bamtools bc bcalm bcftools bedtools binutils binutils-common binutils-x86-64-linux-gnu bioperl bioperl-run biosquid blends-common blt bowtie bowtie2 boxshade bsdextrautils build-essential bwa bzip2 bzip2-doc ca-certificates ca-certificates-java cassiopee cd-hit cdbfasta circos circos-tools clearcut clonalframe clustalo clustalw concavity conservation-code cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu datamash dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dconf-gsettings-backend dconf-service default-jdk-headless default-jre default-jre-headless dialign dialign-tx dialign-tx-data dictionaries-common dirmngr discosnp disulfinder disulfinder-data dmidecode dmsetup dnaclust docutils-common dpkg-dev dssp dvisvgm emacsen-common embassy-domainatrix embassy-domalign embassy-domsearch emboss emboss-data emboss-lib exonerate fakeroot fastdnaml fastlink fastqc fasttree file fitgcp flexbar fontconfig fontconfig-config fonts-circos-symbols fonts-cmu fonts-dejavu-core fonts-dejavu-extra fonts-dejavu-mono fonts-droid-fallback fonts-font-awesome fonts-glyphicons-halflings fonts-lato fonts-liberation fonts-liberation-sans-narrow fonts-lmodern fonts-lyx fonts-mathjax fonts-noto-mono fonts-urw-base35 freecontact fsa g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gasic gatb-core gawk gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu gdal-data gdal-plugins genometools genometools-common gff2aplot gff2ps gfortran gfortran-14 gfortran-14-x86-64-linux-gnu gfortran-x86-64-linux-gnu ghostscript glam2 gmap gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpgconf gpgsm graphicsmagick graphviz grinder gromacs gromacs-data gsettings-desktop-schemas gtk-update-icon-cache hhsuite hhsuite-data 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r-cran-nanoarrow r-cran-ncdf4 r-cran-network r-cran-nleqslv r-cran-nlme r-cran-nloptr r-cran-nmf r-cran-nnet r-cran-nnls r-cran-numderiv r-cran-openssl r-cran-openxlsx r-cran-optimparallel r-cran-optimx r-cran-ordinal r-cran-packrat r-cran-palmerpenguins r-cran-pammtools r-cran-pan r-cran-pander r-cran-parallelly r-cran-parallelmap r-cran-paramhelpers r-cran-party r-cran-partykit r-cran-patchwork r-cran-patrick r-cran-pbapply r-cran-pbivnorm r-cran-pbkrtest r-cran-pbmcapply r-cran-pcapp r-cran-pdftools r-cran-pec r-cran-permute r-cran-phangorn r-cran-pillar r-cran-pingr r-cran-pkgbuild r-cran-pkgconfig r-cran-pkgdown r-cran-pkgkitten r-cran-pkgload r-cran-pki r-cran-plm r-cran-plogr r-cran-plotmo r-cran-plotrix r-cran-plumber r-cran-plyr r-cran-png r-cran-polspline r-cran-polyclip r-cran-polycor r-cran-polynom r-cran-poorman r-cran-popepi r-cran-posterior r-cran-prabclus r-cran-pracma r-cran-praise r-cran-prettyunits r-cran-proc r-cran-processx r-cran-prodlim r-cran-profmem r-cran-profvis r-cran-progress r-cran-progressr r-cran-projpred r-cran-promises r-cran-proxy r-cran-ps r-cran-pscl r-cran-psych r-cran-psychtools r-cran-publish r-cran-purrr r-cran-purrrlyr r-cran-pvclust r-cran-qap r-cran-qpdf r-cran-qtl r-cran-quadprog r-cran-quantmod r-cran-quantreg r-cran-quickjsr r-cran-r.cache r-cran-r.devices r-cran-r.methodss3 r-cran-r.oo r-cran-r.rsp r-cran-r.utils r-cran-r6 r-cran-ragg r-cran-randomforest r-cran-ranger r-cran-rann r-cran-rappdirs r-cran-raster r-cran-rbibutils r-cran-rcmdcheck r-cran-rcolorbrewer r-cran-rcpp r-cran-rcpparmadillo r-cran-rcppeigen r-cran-rcppml r-cran-rcppparallel r-cran-rcppprogress r-cran-rcpproll r-cran-rcpptoml r-cran-rcsdp r-cran-rcurl r-cran-rdpack r-cran-readr r-cran-readxl r-cran-recipes r-cran-registry r-cran-relsurv r-cran-rematch r-cran-rematch2 r-cran-remotes r-cran-renv r-cran-repr r-cran-reprex r-cran-reshape r-cran-reshape2 r-cran-reticulate r-cran-rex r-cran-rgl r-cran-rhpcblasctl r-cran-rio r-cran-riskregression r-cran-rlang r-cran-rmarkdown r-cran-rmpfr r-cran-rmpi r-cran-rms r-cran-rmysql r-cran-rngtools r-cran-robumeta r-cran-robust r-cran-robustbase r-cran-rocr r-cran-rose r-cran-roxygen2 r-cran-rpart r-cran-rpostgresql r-cran-rprojroot r-cran-rrcov r-cran-rsample r-cran-rsconnect r-cran-rsolnp r-cran-rspectra r-cran-rsqlite r-cran-rstan r-cran-rstanarm r-cran-rstantools r-cran-rstatix r-cran-rstudioapi r-cran-rsvg r-cran-rtdists r-cran-rtsne r-cran-runit r-cran-rversions r-cran-rvest r-cran-rwiener r-cran-sandwich r-cran-sass r-cran-scales r-cran-scatterplot3d r-cran-selectr r-cran-sendmailr r-cran-seriation r-cran-sessioninfo r-cran-setrng r-cran-sfsmisc r-cran-shape r-cran-shiny r-cran-shinyjs r-cran-shinystan r-cran-shinythemes r-cran-sjlabelled r-cran-slider r-cran-sm r-cran-smcfcs r-cran-sna r-cran-snakecase r-cran-sodium r-cran-sourcetools r-cran-sp r-cran-spam r-cran-sparsem r-cran-spatial r-cran-spelling r-cran-splines2 r-cran-squarem r-cran-stabledist r-cran-stanheaders r-cran-statmod r-cran-statnet.common r-cran-stringi r-cran-stringr r-cran-strucchange r-cran-survey r-cran-survival r-cran-svglite r-cran-swagger r-cran-sys r-cran-systemfit r-cran-systemfonts r-cran-tensora r-cran-terra r-cran-testit r-cran-testthat r-cran-textshaping r-cran-th.data r-cran-thematic r-cran-themis r-cran-threejs r-cran-tibble r-cran-tidyr r-cran-tidyselect r-cran-tidyverse r-cran-tikzdevice r-cran-timechange r-cran-timedate r-cran-timereg r-cran-timeseries r-cran-tinytest r-cran-tinytex r-cran-truncdist r-cran-truncnorm r-cran-tseries r-cran-tsp r-cran-ttr r-cran-tufte r-cran-tweenr r-cran-tzdb r-cran-ucminf r-cran-unitizer r-cran-urca r-cran-urlchecker r-cran-uroot r-cran-usethis r-cran-utf8 r-cran-uuid r-cran-v8 r-cran-vcd r-cran-vctrs r-cran-vdiffr r-cran-vegan r-cran-venndiagram r-cran-vgam r-cran-vioplot r-cran-vipor r-cran-viridis r-cran-viridislite r-cran-vroom r-cran-waldo r-cran-warp r-cran-webfakes r-cran-webshot r-cran-webutils r-cran-whisker r-cran-whoami r-cran-withr r-cran-writexl r-cran-xfun r-cran-xml r-cran-xml2 r-cran-xmlparsedata r-cran-xopen r-cran-xtable r-cran-xts r-cran-yaml r-cran-zeallot r-cran-zip r-cran-zoo r-doc-html r-other-mott-happy.hbrem r-recommended rake raster3d raxml readline-common readseq rnahybrid rpcsvc-proto rtax ruby ruby-net-telnet ruby-rubygems ruby-sdbm ruby-webrick ruby-xmlrpc ruby3.1 rubygems-integration samtools sensible-utils seqan-apps sgml-base shared-mime-info sibsim4 sigma-align sim4 smalt snap soapdenovo soapdenovo2 squizz sra-toolkit ssake sse4.2-support staden-io-lib-utils sysstat systemd systemd-cryptsetup systemd-sysv systemd-timesyncd t-coffee t1utils tabix tasksel tasksel-data tcl tcl8.6 tex-common texlive-base texlive-bibtex-extra texlive-binaries texlive-latex-base theseus tigr-glimmer tk8.6-blt2.5 tm-align tree-puzzle tree-puzzle-doc ttf-bitstream-vera ucf unicode-data unixodbc-common unzip va-driver-all vcftools vdpau-driver-all velvet w3c-sgml-lib wise wise-data x11-common x11-utils x11-xserver-utils xauth xdg-user-dirs xdg-utils xfonts-encodings xfonts-utils xkb-data xml-core xz-utils zip zlib1g-dev zutty 0 upgraded, 0 newly installed, 1910 to remove and 0 not upgraded. After this operation, 7478 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 185569 files and directories currently installed.) Removing abyss (2.3.9-1) ... Removing r-cran-rmpi (0.7-2-2) ... Removing prime-phylo (1.0.11-12) ... Removing phyml (3:3.3.20220408-3+b1) ... Removing picard-tools (3.1.1+dfsg-1) ... Removing melting (5.2.0-2) ... Removing neobio (0.0.20030929-6) ... Removing libgtk-3-bin (3.24.43-4) ... Removing aevol (5.0+ds-3+b2) ... 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Removing r-cran-brms (2.20.4-1) ... Removing r-cran-shinystan (2.6.0-1) ... Removing r-cran-shinythemes (1.2.0+dfsg-1) ... Removing r-cran-colourpicker (1.3.0+dfsg-1) ... Removing r-cran-shinyjs (2.1.0-1) ... Removing r-cran-devtools (2.4.5-1) ... Removing r-cran-pkgdown (2.0.7-2) ... Removing r-cran-plumber (1.2.1+ds-2) ... Removing r-cran-rgl (1.3.1-1) ... Removing fonts-lato (2.015-1) ... Removing r-cran-fontquiver (0.2.1-4) ... Removing r-cran-fontliberation (0.1.0+dfsg-5) ... Removing fonts-liberation (1:2.1.5-3) ... Removing fonts-liberation-sans-narrow (1:1.07.6-4) ... Removing lmodern (2.005-1) ... Removing texlive-latex-base (2024.20240829-2) ... Removing fonts-lmodern (2.005-1) ... Removing fonts-lyx (2.4.1-2) ... Removing r-cran-pander (0.6.5+dfsg-3+deb12u1) ... Removing r-cran-markdown (1.12+dfsg-2) ... Removing fonts-noto-mono (20201225-2) ... Removing raster3d (3.0-7-2+b1) ... Removing ghostscript (10.04.0~dfsg-1) ... Removing libgs10:amd64 (10.04.0~dfsg-1) ... Removing libgs10-common (10.04.0~dfsg-1) ... Removing freecontact (1.0.21-14) ... Removing gatb-core (1.4.2+dfsg-13+b1) ... Removing mummer (3.23+dfsg-8) ... Removing gff2ps (0.98l-6) ... Removing gawk (1:5.2.1-2+b1) ... update-alternatives: using /usr/bin/mawk to provide /usr/bin/awk (awk) in auto mode Removing r-cran-raster (3.6-26-1) ... Removing r-cran-terra (1.7-78-1) ... Removing libgdal35:amd64 (3.9.2+dfsg-1+b1) ... Removing gdal-data (3.9.2+dfsg-1) ... Removing gdal-plugins:amd64 (3.9.2+dfsg-1+b1) ... Removing genometools (1.6.5+ds-2.2) ... Removing genometools-common (1.6.5+ds-2.2) ... Removing gff2aplot (2.0-15) ... Removing gfortran-14 (14.2.0-3) ... Removing gfortran-14-x86-64-linux-gnu (14.2.0-3) ... Removing glam2 (1064-9) ... Removing gmap (2024-08-20+ds-1) ... Removing gnupg-l10n (2.2.43-8) ... Removing gnupg-utils (2.2.43-8+b1) ... Removing gpg (2.2.43-8+b1) ... Removing gpg-agent (2.2.43-8+b1) ... Removing gpgsm (2.2.43-8+b1) ... Removing gpgconf (2.2.43-8+b1) ... Removing graphicsmagick (1.4+really1.3.45-1) ... Removing libgraphviz-perl (2.24-1) ... Removing graphviz (2.42.4-2) ... Removing grinder (0.5.4-6) ... Removing gromacs (2024.2-1) ... Removing gromacs-data (2024.2-1) ... Removing hhsuite (3.3.0+ds-8+b1) ... Removing hhsuite-data (3.3.0+ds-8) ... Removing imagemagick (8:6.9.13.12+dfsg1-1) ... Removing imagemagick-6.q16 (8:6.9.13.12+dfsg1-1) ... Removing python3-hisat2 (2.2.1-5) ... Removing hisat2 (2.2.1-5) ... Removing hmmer (3.4+dfsg-2) ... Removing va-driver-all:amd64 (2.22.0-1) ... Removing i965-va-driver:amd64 (2.4.1+dfsg1-1) ... Removing libicu-dev:amd64 (72.1-5) ... Removing icu-devtools (72.1-5) ... Removing idba (1.1.3-8) ... Removing r-cran-magick (2.8.3+dfsg-1) ... Removing libmagickcore-6.q16-7-extra:amd64 (8:6.9.13.12+dfsg1-1) ... Removing libmagick++-6.q16-9t64:amd64 (8:6.9.13.12+dfsg1-1) ... Removing infernal (1.1.5-2) ... Removing intel-media-va-driver:amd64 (24.2.5+dfsg1-1) ... Removing sse4.2-support (24) ... Removing isa-support:amd64 (24) ... Removing isympy3 (1.13.2-1) ... Removing isympy-common (1.13.2-1) ... Removing java-wrappers (0.5) ... Removing jellyfish (2.3.1-3+b5) ... Removing kalign (1:3.4.0-1+b1) ... Removing krb5-locales (1.21.3-3) ... Removing lagan (2.0-10) ... Removing laptop-detect (0.16) ... Removing last-align (1542-1+b1) ... Removing libclang-rt-18-dev:amd64 (1:18.1.8-11) ... Removing lib32stdc++6 (14.2.0-3) ... Removing lib32gcc-s1 (14.2.0-3) ... Removing libaacs0:amd64 (0.11.1-4) ... Removing sra-toolkit (3.0.3+dfsg-9) ... Removing libre2-11:amd64 (20240501-3) ... Removing libace-perl (1.92-12) ... Removing libhdf4-0-alt:amd64 (4.3.0-1) ... Removing r-cran-ncdf4 (1.22-1+b1) ... Removing libnetcdf19t64:amd64 (1:4.9.2-7) ... Removing libtest-most-perl (0.38-1) ... Removing libtest-differences-perl (0.71-1) ... Removing libtext-diff-perl (1.45-2) ... Removing libalgorithm-merge-perl (0.08-5) ... Removing libalgorithm-diff-xs-perl:amd64 (0.04-8+b3) ... Removing libalgorithm-munkres-perl (0.08-5) ... Removing r-cran-intergraph (2.0-4-2) ... Removing r-cran-threejs (0.3.3+dfsg-2) ... Removing libann0 (1.1.2+doc-9+b1) ... Removing libheif-plugin-aomenc:amd64 (1.18.1-2) ... Removing libgd-perl (2.78-1+b2) ... Removing libpicard-java (3.1.1+dfsg-1) ... Removing libgkl-java (0.8.11+dfsg-2) ... Removing libhtsjdk-java (4.1.0+dfsg-2) ... Removing libcommons-jexl2-java (2.1.1-6) ... Removing libbarclay-java (5.0.0+dfsg-1) ... Removing liblog4j2-java (2.19.0-2) ... Removing liblightcouch-java (0.2.0-1) ... Removing libhttpclient-java (4.5.14-1) ... Removing libcommons-logging-java (1.3.0-1) ... Removing libcommons-lang3-java (3.14.0-1) ... Removing systemd-timesyncd (256.6-1) ... Removing libaprutil1-ldap:amd64 (1.6.3-3) ... Removing libaprutil1-dbd-sqlite3:amd64 (1.6.3-3) ... Removing libaprutil1t64:amd64 (1.6.3-3) ... Removing libapr1t64:amd64 (1.7.5-1) ... Removing libargtable2-0 (13-2) ... Removing libarmadillo14 (1:14.0.1+dfsg-2) ... Removing libarpack2t64:amd64 (3.9.1-1.1+b2) ... Removing libarray-compare-perl (3.0.8-1) ... Removing r-cran-rstan (2.32.5-2) ... Removing r-cran-ddalpha (1.3.15-1) ... Removing r-cran-bh (1.84.0-1) ... Removing libboost-dev:amd64 (1.83.0.2+b2) ... Removing libboost1.83-dev:amd64 (1.83.0-3.2) ... Removing libstdc++-14-dev:amd64 (14.2.0-3) ... Removing libgfortran-14-dev:amd64 (14.2.0-3) ... Removing r-cran-av (0.9.0+dfsg-1+b1) ... Removing libavfilter10:amd64 (7:7.0.2-3) ... Removing libflite1:amd64 (2.2-6+b2) ... Removing libass9:amd64 (1:0.17.3-1) ... Removing pinentry-curses (1.2.1-4+b1) ... Removing libassuan9:amd64 (3.0.1-2) ... Removing libpocketsphinx3:amd64 (0.8+5prealpha+1-15+b3) ... Removing libsphinxbase3t64:amd64 (0.8+5prealpha+1-18) ... Removing libpulse0:amd64 (16.1+dfsg1-5.1) ... Removing libasyncns0:amd64 (0.8-6+b4) ... Removing libbiojava-java (1:1.9.7+dfsg-1) ... Removing libbiojava1.9-java (1:1.9.7+dfsg-1) ... Removing wise (2.4.1-25) ... Removing sigma-align (1.1.3-9) ... Removing libauthen-sasl-perl (2.1700-1) ... Removing libavformat61:amd64 (7:7.0.2-3) ... Removing libavcodec61:amd64 (7:7.0.2-3) ... Removing libswscale8:amd64 (7:7.0.2-3) ... Removing libswresample5:amd64 (7:7.0.2-3) ... Removing libnamespace-clean-perl (0.27-2) ... Removing libb-hooks-endofscope-perl (0.28-1) ... Removing libparams-validate-perl:amd64 (1.31-2+b2) ... Removing libpackage-stash-perl (0.40-1) ... Removing libmoo-perl (2.005005-1) ... Removing libimport-into-perl (1.002005-2) ... Removing smalt (0.7.6-13) ... Removing libbambamc0:amd64 (0.0.50-6+b1) ... Removing libbamtools2.5.2:amd64 (2.5.2+dfsg-6) ... Removing libbdplus0:amd64 (0.2.0-4) ... Removing libbibtex-parser-perl (1.05+dfsg-1) ... Removing libbio-eutilities-perl (1.77-2) ... Removing libbio-asn1-entrezgene-perl (1.730-3) ... Removing libbio-cluster-perl (1.7.3-6) ... Removing libbio-featureio-perl (1.6.905-2) ... Removing libbio-variation-perl (1.7.5-3) ... Removing libbio-tools-run-remoteblast-perl (1.7.3-3) ... Removing libbio-perl-run-perl (1.7.3-11) ... Removing libdate-calc-xs-perl:amd64 (6.4-2+b3) ... Removing libdate-calc-perl (6.4-2) ... Removing libbit-vector-perl:amd64 (7.4-3+b1) ... Removing liblapack-dev:amd64 (3.12.0-3) ... Removing libblas-dev:amd64 (3.12.0-3) ... Removing r-cran-tseries (0.10-57-1) ... Removing libsuperlu6:amd64 (6.0.1+dfsg1-1+b1) ... Removing macs (3.0.2-1) ... Removing python3-hmmlearn (0.3.0-5+b1) ... Removing python3-sklearn (1.4.2+dfsg-6) ... Removing r-cran-robust (0.7-4-1) ... Removing r-cran-rrcov (1.7-6-1) ... Removing libblas3:amd64 (3.12.0-3) ... Removing libblosc1:amd64 (1.21.5+ds-1+b1) ... Removing libbluray2:amd64 (1:1.3.4-1+b1) ... Removing mira-rfam-12s-rrna (4.9.6-11) ... Removing mira-assembler (4.9.6-11) ... Removing libboost-filesystem1.83.0:amd64 (1.83.0-3.2) ... Removing libboost-mpi1.83.0 (1.83.0-3.2) ... Removing libboost-program-options1.83.0:amd64 (1.83.0-3.2) ... Removing libcassie1v5 (1.0.9-4+b1) ... Removing libboost-serialization1.83.0:amd64 (1.83.0-3.2) ... Removing libboost-thread1.83.0:amd64 (1.83.0-3.2) ... Removing libwoff1:amd64 (1.0.2-2+b1) ... Removing r-cran-v8 (4.4.2+dfsg-1+b1) ... Removing libbs2b0:amd64 (3.1.0+dfsg-8) ... Removing libbsd-resource-perl (1.2911-2+b3) ... Removing libbytecode-java (0.92.svn.20090106-2.1) ... Removing libbz2-dev:amd64 (1.0.8-6) ... Removing libpng-dev:amd64 (1.6.44-1) ... Removing zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Removing libpcre2-dev:amd64 (10.42-4+b1) ... Removing libreadline-dev:amd64 (8.2-5) ... Removing libncurses-dev:amd64 (6.5-2) ... Removing libjpeg-dev:amd64 (1:2.1.5-3) ... Removing libjpeg62-turbo-dev:amd64 (1:2.1.5-3) ... Removing libc6-dev:amd64 (2.40-2) ... Removing libc-dev-bin (2.40-2) ... Removing libc6-i386 (2.40-2) ... Removing libcache-cache-perl (1.08-3) ... Removing texlive-base (2024.20240829-2) ... Removing python3-rlpycairo (0.3.0-3) ... Removing python3-cairo (1.26.1-2) ... Removing libcapture-tiny-perl (0.48-2) ... Removing libcarp-always-perl (0.16-1) ... Removing libcarp-clan-perl (6.08-2) ... Removing libgvpr2:amd64 (2.42.4-2) ... Removing libgvc6 (2.42.4-2) ... Removing libcfitsio10t64:amd64 (4.4.1-2) ... Removing libcgi-fast-perl (1:2.17-1) ... Removing libcgi-pm-perl (4.66-1) ... Removing libcgraph6:amd64 (2.42.4-2) ... Removing libchromaprint1:amd64 (1.5.1-6) ... Removing libcifpp5:amd64 (5.0.7.1-3+b1) ... Removing libcifpp-data (5.0.7.1-3) ... Removing librist4:amd64 (0.2.10+dfsg-2) ... Removing libcjson1:amd64 (1.7.18-3) ... Removing mrbayes (3.2.7a-7+b1) ... Removing libhmsbeagle1v5:amd64 (3.1.2+dfsg-13+b1) ... Removing mesa-opencl-icd:amd64 (24.2.2-1) ... Removing libclc-18 (1:18.1.8-11) ... Removing libclang-common-18-dev:amd64 (1:18.1.8-11) ... Removing libclang-cpp18 (1:18.1.8-11) ... Removing libexception-class-perl (1.45-1) ... Removing libclass-data-inheritable-perl (0.08-3) ... Removing libxmlrpc-lite-perl (0.717-5) ... Removing libsoap-lite-perl (1.27-3) ... Removing libclass-inspector-perl (1.36-3) ... Removing librole-tiny-perl (2.002004-1) ... Removing libclass-method-modifiers-perl (2.15-1) ... Removing libclass-xsaccessor-perl (1.19-4+b3) ... Removing libclc-18-dev (1:18.1.8-11) ... Removing libxml-xpath-perl (1.48-1) ... Removing mipe (1.1-9) ... Removing libxml-dom-xpath-perl (0.14-4) ... Removing libxml-dom-perl (1.46-2) ... Removing libcodec2-1.2:amd64 (1.2.0-2+b1) ... Removing libcommons-cli-java (1.6.0-1) ... Removing libcommons-codec-java (1.16.0-1) ... Removing libcommons-collections3-java (3.2.2-3) ... Removing libcommons-compress-java (1.25.0-1) ... Removing libcommons-dbcp-java (1.4-8) ... Removing libcommons-io-java (2.16.1-1) ... Removing libcommons-math3-java (3.6.1-3) ... Removing libcommons-pool-java (1.6-5) ... Removing libconfig-general-perl (2.65-2) ... Removing libconvert-binary-c-perl (0.84-1+b4) ... Removing libmime-tools-perl (5.515-1) ... Removing libconvert-binhex-perl (1.125-3) ... Removing libcppunit-1.15-0:amd64 (1.15.1-4+b1) ... Removing libcrypt-dev:amd64 (1:4.4.36-5) ... Removing libspreadsheet-parseexcel-perl (0.6600-1) ... Removing libcrypt-rc4-perl (2.02-5) ... Removing libxerces-c3.2t64:amd64 (3.2.4+debian-1.3) ... Removing staden-io-lib-utils (1.15.0-1.1+b1) ... Removing libstaden-read14t64:amd64 (1.15.0-1.1+b1) ... Removing r-cran-webutils (1.2.1-1) ... Removing r-cran-usethis (3.0.0-1) ... Removing r-cran-rcurl (1.98-1.16+dfsg-1) ... Removing libdata-dump-perl (1.25-1) ... Removing libdata-dumper-simple-perl (0.11-7) ... Removing libdate-manip-perl (6.95-1) ... Removing libheif-plugin-x265:amd64 (1.18.1-2) ... Removing libdbd-mysql-perl:amd64 (4.052-1+b2) ... Removing libdbd-pg-perl (3.18.0-1+b2) ... Removing libdbd-sqlite3-perl:amd64 (1.74-1+b2) ... Removing libdbi-perl:amd64 (1.645-1) ... Removing libnet-dbus-perl (1.2.0-2+b2) ... Removing libdeflate-dev:amd64 (1.21-1) ... Removing r-cran-tidyverse (2.0.0+dfsg-1) ... Removing r-cran-ragg (1.3.2-1) ... Removing proj-bin (9.5.0-1) ... Removing plink2 (2.00~a5.8-231123+dfsg-1+b1) ... Removing libdevel-stacktrace-perl (2.0500-1) ... Removing libpod-coverage-perl (0.23-2) ... Removing libdevel-symdump-perl (2.18-5) ... Removing libdigest-perl-md5-perl (1.9-5) ... Removing libdivsufsort3:amd64 (2.0.1-6) ... Removing libdjvulibre21:amd64 (3.5.28-2+b1) ... Removing libdjvulibre-text (3.5.28-2) ... Removing libdpkg-perl (1.22.11) ... Removing mesa-vulkan-drivers:amd64 (24.2.2-1) ... Removing vdpau-driver-all:amd64 (1.5-3) ... Removing mesa-vdpau-drivers:amd64 (24.2.2-1) ... Removing zutty (0.16.1.20240818+dfsg1-1) ... Removing libegl1:amd64 (1.7.0-1+b1) ... Removing libegl-mesa0:amd64 (24.2.2-1) ... Removing libvdpau-va-gl1:amd64 (0.4.2-2) ... Removing mesa-va-drivers:amd64 (24.2.2-1) ... Removing libdvdnav4:amd64 (6.1.1-3) ... Removing libdvdread8t64:amd64 (6.1.3-1.1) ... Removing libllvmspirvlib18.1:amd64 (18.1.4-1) ... Removing libfile-mimeinfo-perl (0.35-1) ... Removing libtext-csv-xs-perl:amd64 (1.56-1) ... Removing libencode-perl:amd64 (3.21-1+b1) ... Removing liberror-perl (0.17029-2) ... Removing ssake (4.0.1-2) ... Removing python3-pyfaidx (0.8.1.2-1) ... Removing python3-simplejson (3.19.3-1) ... Removing libogdi4.1:amd64 (4.1.1+ds-4) ... Removing libtype-tiny-perl (2.004000-1) ... Removing libsvg-graph-perl (0.02-4) ... Removing libstatistics-descriptive-perl (3.0801-1) ... Removing liblist-moreutils-perl (0.430-2) ... Removing libexporter-tiny-perl (1.006002-1) ... Removing libfakeroot:amd64 (1.36-1) ... Removing libfcgi-bin (2.4.2-2.1) ... Removing libfcgi-perl (0.82+ds-3+b1) ... Removing libfcgi0t64:amd64 (2.4.2-2.1) ... Removing librubberband2:amd64 (3.3.0+dfsg-2+b2) ... Removing libgromacs9:amd64 (2024.2-1) ... Removing libfftw3-single3:amd64 (3.3.10-1+b3) ... Removing libfile-desktopentry-perl (0.22-3) ... Removing libfile-basedir-perl (0.09-2) ... Removing libfile-fcntllock-perl (0.22-4+b3) ... Removing libtree-dagnode-perl (1.32-1) ... Removing libfile-slurp-tiny-perl (0.004-2) ... Removing libfile-sort-perl (1.01-3) ... Removing libfindbin-libs-perl (3.0.2-1) ... Removing libsndfile1:amd64 (1.2.2-1+b2) ... Removing libflac12t64:amd64 (1.4.3+ds-2.1) ... Removing libhtml-format-perl (2.16-2) ... Removing libfont-afm-perl (1.20-4) ... Removing libfont-ttf-perl (1.06-2) ... Removing libfreecontact0t64:amd64 (1.0.21-14) ... Removing libfreemarker-java (2.3.32-2) ... Removing libspatialite8t64:amd64 (5.1.0-3+b1) ... Removing libfreexl1:amd64 (2.0.0-1+b2) ... Removing libfreezethaw-perl (0.5001-3) ... Removing r-cran-textshaping (0.3.7-2) ... Removing libfyba0t64:amd64 (4.1.1-11) ... Removing rnahybrid (2.1.2-8) ... Removing libg20 (0.72-12+b2) ... Removing libgatbcore3:amd64 (1.4.2+dfsg-13+b1) ... Removing libgatk-native-bindings-java (1.0.0+dfsg-2) ... Removing libgclib3:amd64 (0.12.7+ds-5+b1) ... Removing perl-tk (1:804.036+dfsg1-3) ... Removing vcftools (0.1.16-3+b1) ... Removing libhttp-daemon-perl (6.16-1) ... Removing libtest-deep-perl (1.204-1) ... Removing libmailtools-perl (2.21-3) ... Removing libgraphics-colorobject-perl (0.5.0-10.1) ... Removing libgraphics-colornames-perl (3.5.0-3.1) ... Removing perl-doc (5.38.2-5) ... Removing 'diversion of /usr/bin/perldoc to /usr/bin/perldoc.stub by perl-doc' Removing rtax (0.984-8) ... Removing librsvg2-common:amd64 (2.59.0+dfsg-3) ... Removing libgdk-pixbuf2.0-bin (2.42.12+dfsg-1) ... Removing librttopo1:amd64 (1.1.0-3+b1) ... Removing libgeos-c1t64:amd64 (3.13.0-1) ... Removing libgeos3.13.0:amd64 (3.13.0-1) ... Removing libgeotiff5:amd64 (1.7.3-1) ... Removing libgetopt-euclid-perl (0.4.6-1) ... Removing libgetopt-simple-perl (1.52-7) ... Removing libgoogle-glog0v6t64 (0.6.0-2.1) ... Removing libgflags2.2 (2.2.2-2) ... Removing tm-align (20190822+dfsg-3) ... Removing r-cran-vioplot (0.5.0-1) ... Removing r-cran-sm (2.2-6.0-1) ... Removing libgraphicsmagick-q16-3t64 (1.4+really1.3.45-1) ... Removing libjxl0.9:amd64 (0.9.2-10) ... Removing r-cran-git2r (0.33.0+dfsg-1) ... Removing r-cran-gert (2.1.1+dfsg-1) ... Removing libgit2-1.7:amd64 (1.7.2+ds-1+b2) ... Removing libgkl-jni (0.8.11+dfsg-2) ... Removing libgles2:amd64 (1.7.0-1+b1) ... Removing libglib2.0-data (2.82.1-1) ... Removing libglu1-mesa:amd64 (9.0.2-1.1+b1) ... Removing libopengl0:amd64 (1.7.0-1+b1) ... Removing libgme0:amd64 (0.6.3-7+b1) ... Removing velvet (1.2.10+dfsg1-9) ... Removing libgoogle-gson-java (2.10.1-1) ... Removing libgpm2:amd64 (1.20.7-11) ... Removing libgraph-perl (1:0.9729-1) ... Removing mupdf-tools (1.24.8+ds2-2+b2) ... Removing libgs-common (10.04.0~dfsg-1) ... Removing libmath-tamuanova-perl (1.0.2-4+b1) ... Removing libtamuanova-0.2 (0.2-5+b3) ... Removing r-cran-energy (1.7-12-1) ... Removing libgsm1:amd64 (1.0.22-1+b1) ... Removing libzmq5:amd64 (4.3.5-1+b2) ... Removing r-cran-rpostgresql (0.7-6+dfsg-1) ... Removing libpq5:amd64 (17~rc1-1) ... Removing libgts-bin (0.7.6+darcs121130-5.2) ... Removing libgts-0.7-5t64:amd64 (0.7.6+darcs121130-5.2) ... Removing libgumbo2:amd64 (0.12.0+dfsg-2+b1) ... Removing libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ... Removing libheap-perl (0.80-5) ... Removing libhpdf-2.3.0:amd64 (2.3.0+dfsg-1+b2) ... Removing libhtml-form-perl (6.11-1) ... Removing libhtml-tableextract-perl (2.15-2) ... Removing samtools (1.20-3) ... Removing python3-pybedtools (0.10.0-1+b1) ... Removing tabix (1.20+ds-1) ... Removing libhttp-parser2.9:amd64 (2.9.4-6+b1) ... Removing libhttpcore-java (4.4.16-1) ... Removing libhunspell-1.7-0:amd64 (1.7.2+really1.7.2-10+b2) ... Removing r-cran-stanheaders (2.32.5-1) ... Removing r-cran-projpred (2.8.0+dfsg-1) ... Removing r-cran-rstantools (2.4.0-1) ... Removing r-cran-rcppparallel (5.1.7+dfsg-5+b1) ... Removing libtbb-dev:amd64 (2021.12.0-1) ... Removing libtbb12:amd64 (2021.12.0-1) ... Removing libtbbbind-2-5:amd64 (2021.12.0-1) ... Removing libhwy1t64:amd64 (1.2.0-2) ... Removing r-cran-rsample (1.2.1+dfsg-1) ... Removing r-cran-kableextra (1.4.0+dfsg-1) ... Removing r-cran-snakecase (0.11.0-2) ... Removing libidn12:amd64 (1.42-2) ... Removing libigdgmm12:amd64 (22.5.0+ds1-1) ... Removing libijs-0.35:amd64 (0.35-15.1+b1) ... Removing libopenexr-3-1-30:amd64 (3.1.5-5.1+b2) ... Removing libimath-3-1-29t64:amd64 (3.1.11-2+b1) ... Removing libio-all-perl (0.87-2) ... Removing libio-compress-brotli-perl (0.004001-2+b2) ... Removing libipc-run-perl (20231003.0-2) ... Removing libio-pty-perl (1:1.20-1+b1) ... Removing libio-sessiondata-perl (1.03-3) ... Removing libnet-smtp-ssl-perl (1.04-2) ... Removing libole-storage-lite-perl (0.22-1) ... Removing libio-stringy-perl (2.113-2) ... Removing libipc-sharelite-perl (0.17-5+b2) ... Removing libipc-system-simple-perl (1.30-2) ... Removing libjbig2dec0:amd64 (0.20-1+b2) ... Removing libjbzip2-java (0.9.1-8) ... Removing libjcode-pm-perl (2.06-1.1) ... Removing libjellyfish-2.0-2:amd64 (2.3.1-3+b5) ... Removing libjgrapht0.8-java (0.8.3-6) ... Removing libjgraph-java (5.12.4.2+dfsg-7) ... Removing libjoptsimple-java (5.0.4-4) ... Removing r-cran-hmisc (5.1-3-1) ... Removing r-cran-latticeextra (0.6-30-1) ... Removing r-cran-jpeg (0.1-10-1) ... Removing r-cran-pdftools (3.4.0-1+b2) ... Removing r-cran-qpdf (1.3.3+dfsg-1) ... Removing libqpdf29t64:amd64 (11.9.1-1) ... Removing libjs-bootswatch (3.3.7+dfsg2-1.1) ... Removing r-cran-profvis (0.3.8+dfsg-1) ... Removing r-cran-tufte (0.13-1) ... Removing r-cran-roxygen2 (7.3.2-1) ... Removing r-cran-dt (0.33+dfsg-1) ... Removing r-cran-bookdown (0.40+dfsg-1) ... Removing r-cran-urlchecker (1.0.1-2) ... Removing libjs-jquery-datatables-extensions (0.0+git20150910.28fd64e+dfsg-5) ... Removing libjs-lunr (2.3.9~dfsg-2) ... Removing libjs-remark-slide (0.15.0+ds-2) ... Removing libjs-sizzle (2.3.10+ds+~2.3.6-1) ... Removing libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Removing libjson-c5:amd64 (0.18+ds-1) ... Removing libjsoncpp25:amd64 (1.9.5-6+b2) ... Removing libjxr-tools (1.2~git20170615.f752187-5.3) ... Removing libjxr0t64:amd64 (1.2~git20170615.f752187-5.3) ... Removing libkmlengine1t64:amd64 (1.3.0-12) ... Removing libkmldom1t64:amd64 (1.3.0-12) ... Removing libkmlbase1t64:amd64 (1.3.0-12) ... Removing libkmod2:amd64 (33+20240816-2) ... Removing libksba8:amd64 (1.6.7-2) ... Removing liblab-gamut1:amd64 (2.42.4-2) ... Removing r-cran-seriation (1.5.5-1) ... Removing r-cran-vegan (2.6-8+dfsg-1) ... Removing r-cran-mets (1.3.3+dfsg-1) ... Removing r-cran-timereg (2.0.5-1) ... Removing liblapack3:amd64 (3.12.0-3) ... Removing liblatex-tounicode-perl (0.55-1) ... Removing libpoppler-cpp1:amd64 (24.08.0-2) ... Removing libpoppler140:amd64 (24.08.0-2) ... Removing libldap-common (2.5.18+dfsg-3) ... Removing liblilv-0-0:amd64 (0.24.24-2) ... Removing liblist-allutils-perl (0.19-1) ... Removing liblist-moreutils-xs-perl (0.430-4+b1) ... Removing liblist-someutils-xs-perl:amd64 (0.58-3+b2) ... Removing liblist-someutils-perl (0.59-1) ... Removing liblist-utilsby-perl (0.12-2) ... Removing ncbi-blast+-legacy (2.16.0+ds-6) ... Removing ncbi-blast+ (2.16.0+ds-6) ... Removing liblmdb0:amd64 (0.9.31-1+b1) ... Removing med-tasks (3.8.1) ... Removing libodbcinst2:amd64 (2.3.12-1+b2) ... Removing libodbc2:amd64 (2.3.12-1+b2) ... Removing liblua5.1-0:amd64 (5.1.5-9+b2) ... Removing liblzma-dev:amd64 (5.6.2-2) ... Removing libmagic1t64:amd64 (1:5.45-3) ... Removing libmagic-mgc (1:5.45-3) ... Removing r-cran-rmysql (0.10.28-1) ... Removing libmariadb3:amd64 (1:11.4.3-1) ... Removing libmath-bezier-perl (0.01-4) ... Removing libmath-spline-perl (0.02-4) ... Removing libmath-derivative-perl (1.01-3) ... Removing libmath-random-mt-perl (1.17-2+b3) ... Removing libmath-round-perl (0.08-1) ... Removing libmath-vec-perl (1.01-5) ... Removing libmath-vecstat-perl (0.08-3) ... Removing libncbi-wvdb3:amd64 (3.0.2+dfsg-2+b1) ... Removing libngs-java:amd64 (3.0.3+dfsg-9) ... Removing libngs-jni:amd64 (3.0.3+dfsg-9) ... Removing libncbi-ngs3:amd64 (3.0.3+dfsg-9) ... Removing libncbi-vdb3:amd64 (3.0.2+dfsg-2+b1) ... Removing libmbedtls14t64:amd64 (2.28.8-1) ... Removing libminizip1t64:amd64 (1:1.3.dfsg+really1.3.1-1) ... Removing libmjson-java (1.4.0-3) ... Removing libmldbm-perl (2.05-4) ... Removing libmongodb-java (3.6.3-2) ... Removing libmp3lame0:amd64 (3.100-6+b2) ... Removing r-cran-rmpfr (0.9-5-1) ... Removing libopenmpt0t64:amd64 (0.7.9-1) ... Removing libmpg123-0t64:amd64 (1.32.7-1) ... Removing libmujs3:amd64 (1.3.3-3+b2) ... Removing libmuparser2v5:amd64 (2.3.4-1) ... Removing libmysofa1:amd64 (1.3.2+dfsg-2+b1) ... Removing readseq (1-15) ... Removing ncbi-tools-bin (6.1.20170106+dfsg2-4) ... Removing libncbi6t64:amd64 (6.1.20170106+dfsg2-4) ... Removing parallel (20240222+ds-2) ... Removing 'diversion of /usr/bin/parallel to /usr/bin/parallel.moreutils by parallel' Removing 'diversion of /usr/share/man/man1/parallel.1.gz to /usr/share/man/man1/parallel.moreutils.1.gz by parallel' Removing netpbm (2:11.07.00-2) ... Removing libnetpbm11t64:amd64 (2:11.07.00-2) ... Removing r-cran-afex (1.4-1-1) ... Removing r-cran-mlmrev (1.0-8-2) ... Removing r-cran-optimx (2023-10.21-1) ... Removing libnorm1t64:amd64 (1.5.9+dfsg-3.1) ... Removing libnpth0t64:amd64 (1.6-3.1) ... Removing libnss-systemd:amd64 (256.6-1) ... Removing libx265-209:amd64 (3.6-3) ... Removing libstatistics-basic-perl (1.6611-3) ... Removing libnumber-format-perl (1.76-1) ... Removing libvorbisfile3:amd64 (1.3.7-2) ... Removing libvorbisenc2:amd64 (1.3.7-2) ... Removing libvorbis0a:amd64 (1.3.7-2) ... Removing libopenblas0:amd64 (0.3.28+ds-2) ... Removing r-cran-mice (3.16.0-1) ... Removing r-cran-mitml (0.4-5-1) ... Removing r-cran-jomo (2.7-6-1) ... Removing r-cran-ordinal (2023.12-4-1) ... Removing r-cran-ucminf (1.2.2-1) ... Removing r-cran-splines2 (0.5.2-1) ... Removing r-cran-fields (16.2-1) ... Removing r-cran-spam (2.10-0-1) ... Removing libopus0:amd64 (1.5.2-2) ... Removing libpackage-stash-xs-perl:amd64 (0.30-1+b3) ... Removing libspreadsheet-writeexcel-perl (2.40-4) ... Removing libparse-recdescent-perl (1.967015+dfsg-4) ... Removing libpathplan4:amd64 (2.42.4-2) ... Removing libpcre2-16-0:amd64 (10.42-4+b1) ... Removing libpcre2-32-0:amd64 (10.42-4+b1) ... Removing libpcre2-posix3:amd64 (10.42-4+b1) ... Removing libperl4-corelibs-perl (0.005-1) ... Removing libpgm-5.3-0t64:amd64 (5.3.128~dfsg-2.1) ... Removing pkgconf:amd64 (1.8.1-3) ... Removing pkgconf-bin (1.8.1-3) ... Removing libpkgconf3:amd64 (1.8.1-3) ... Removing libplacebo349:amd64 (7.349.0-2) ... Removing libpng-tools (1.6.44-1) ... Removing libzvbi0t64:amd64 (0.2.42-2) ... Removing r-cran-svglite (2.1.3-1+b1) ... Removing libpod-parser-perl (1.67-1) ... Removing 'diversion of /usr/bin/podselect to /usr/bin/podselect.bundled by libpod-parser-perl' Removing 'diversion of /usr/share/man/man1/podselect.1.gz to /usr/share/man/man1/podselect.bundled.1.gz by libpod-parser-perl' Removing libpostproc58:amd64 (7:7.0.2-3) ... Removing libpostscript-perl (0.06-3.1) ... Removing libqhull-r8.0:amd64 (2020.2-6+b1) ... Removing librabbitmq4:amd64 (0.14.0-1) ... Removing mothur (1.48.1-1) ... Removing libreadonly-perl (2.050-3) ... Removing libref-util-perl (0.204-2) ... Removing libref-util-xs-perl (0.117-2+b3) ... Removing libregexp-common-perl (2024080801-1) ... Removing librhino-java (1.7.14-2.1) ... Removing libsamplerate0:amd64 (0.2.2-4+b1) ... Removing libsasl2-modules:amd64 (2.1.28+dfsg1-8) ... Removing sysstat (12.7.5-2) ... Removing libsratom-0-0:amd64 (0.6.16-1+b1) ... Removing libsord-0-0:amd64 (0.16.16-2+b1) ... Removing libserd-0-0:amd64 (0.32.2-1) ... Removing libset-intspan-perl (1.19-3) ... Removing libset-object-perl (1.42-1+b4) ... Removing libset-scalar-perl (1.29-3) ... Removing libshine3:amd64 (3.1.1-2+b1) ... Removing libsigsegv2:amd64 (2.14-1+b1) ... Removing libslf4j-java (1.7.32-1) ... Removing libsnappy-java (1.1.10.5-2) ... Removing libsnappy-jni (1.1.10.5-2) ... Removing libsnappy1v5:amd64 (1.2.1-1) ... Removing r-cran-sodium (1.3.1+dfsg-1) ... Removing libsodium23:amd64 (1.0.18-1+b1) ... Removing libsort-naturally-perl (1.03-4) ... Removing libsoxr0:amd64 (0.1.3-4+b1) ... Removing libspeex1:amd64 (1.2.1-2+b1) ... Removing libspiffy-perl (0.46-1) ... Removing tree-puzzle (5.3~rc16+dfsg-10) ... Removing libsprng2 (2.0a-16) ... Removing libsquid1t64:amd64 (1.9g+cvs20050121-15.1) ... Removing squizz (0.99d+dfsg-3) ... Removing libsquizz (0.99d+dfsg-3) ... Removing libsrt1.5-gnutls:amd64 (1.5.3-1+b2) ... Removing libssh-4:amd64 (0.11.1-1) ... Removing libsub-exporter-progressive-perl (0.001013-3) ... Removing libsub-identify-perl (0.14-3+b2) ... Removing libsub-name-perl:amd64 (0.27-1+b2) ... Removing libsub-quote-perl (2.006008-1) ... Removing libtest-warn-perl (0.37-2) ... Removing libtest-exception-perl (0.43-3) ... Removing libsub-uplevel-perl (0.2800-3) ... Removing libsvg-perl (2.87-1) ... Removing libtask-weaken-perl (1.06-2) ... Removing libtbbmalloc2:amd64 (2021.12.0-1) ... Removing r-cran-r.rsp (0.46.0+ds-1) ... Removing tcl (8.6.14) ... Removing tcl8.6 (8.6.14+dfsg-1) ... Removing libtest-pod-perl (1.52-3) ... Removing libtest-requiresinternet-perl (0.05-4) ... Removing libtext-csv-perl (2.04-1) ... Removing libtext-format-perl (0.63-1) ... Removing libtext-iconv-perl:amd64 (1.7-8+b3) ... Removing libtheora0:amd64 (1.1.1+dfsg.1-17) ... Removing libtie-ixhash-perl (1.23-4) ... Removing libtirpc-dev:amd64 (1.3.4+ds-1.3) ... Removing libtre5:amd64 (0.8.0-8) ... Removing libtwolame0:amd64 (0.4.0-2+b1) ... Removing libtype-tiny-xs-perl:amd64 (0.025-2) ... Removing libudfread0:amd64 (1.1.2-1+b1) ... Removing libunibreak6:amd64 (6.1-2) ... Removing libunicode-map-perl (0.112-13+b3) ... Removing libunwind8:amd64 (1.6.2-3.1) ... Removing liburiparser1:amd64 (0.9.8+dfsg-1) ... Removing r-cran-batchtools (0.9.17+dfsg-1) ... Removing libvariable-magic-perl (0.64-1) ... Removing libvidstab1.1:amd64 (1.1.0-2+b1) ... Removing libvpx9:amd64 (1.14.1-1) ... Removing libwmflite-0.2-7:amd64 (0.2.13-1.1+b2) ... Removing xauth (1:1.1.2-1) ... Removing libx11-protocol-perl (0.56-9) ... Removing libx264-164:amd64 (2:0.164.3108+git31e19f9-2) ... Removing libxcb-shape0:amd64 (1.17.0-2) ... Removing libxxf86dga1:amd64 (2:1.1.5-1+b1) ... Removing libxkbfile1:amd64 (1:1.1.0-1+b1) ... Removing libxml-sax-writer-perl (0.57-3) ... Removing libxml-filter-buffertext-perl (1.01-7) ... Removing libxml-simple-perl (2.25-2) ... Removing libxml-libxslt-perl:amd64 (2.002001-1+b2) ... Removing libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b3) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Unregistering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Removing libxml-sax-expat-perl (0.51-2) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::SAX::Expat with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Removing libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Unregistering Perl SAX parser XML::SAX::PurePerl with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Removing libxml-namespacesupport-perl (1.12-2) ... Removing libxml-perl (0.08-4) ... Removing libxml-regexp-perl (0.04-1.1) ... Removing libxml-sax-base-perl (1.09-3) ... Removing libxml-writer-perl (0.900-2) ... Removing libxml-xpathengine-perl (0.14-2) ... Removing libxmuu1:amd64 (2:1.1.3-3+b2) ... Removing libxstring-perl:amd64 (0.005-2+b3) ... Removing libxv1:amd64 (2:1.0.11-1.1+b1) ... Removing libxvidcore4:amd64 (2:1.3.7-1+b1) ... Removing libyaml-libyaml-perl (0.89+ds-1+b1) ... Removing libyaml-perl (1.31-1) ... Removing libzimg2:amd64 (3.0.5+ds1-1+b1) ... Removing libzix-0-0:amd64 (0.4.2-2+b1) ... Removing libzvbi-common (0.2.42-2) ... Removing linux-libc-dev (6.10.9-1) ... Removing linux-sysctl-defaults (4.10.1) ... Removing r-cran-rtsne (0.17-1) ... Removing littler (0.3.20-1) ... Removing loki (2.4.7.4-10) ... Removing lua-filesystem:amd64 (1.8.0-3+b1) ... Removing lua-lpeg:amd64 (1.0.2-2+b1) ... Removing lua-md5:amd64 (1.2+git+1+8d87fee-2+b1) ... Removing luit (2.0.20221028-1) ... Removing 'diversion of /usr/bin/luit to /usr/bin/luit.x11-utils by luit' Removing 'diversion of /usr/share/man/man1/luit.1.gz to /usr/share/man/man1/luit.x11-utils.1.gz by luit' Removing lynx (2.9.2-1) ... Removing lynx-common (2.9.2-1) ... Removing mafft (7.505-1) ... Removing mailcap (3.72) ... Removing make (4.3-4.1) ... Removing manpages-dev (6.8-2) ... Removing manpages (6.8-2) ... Removing maq (0.7.1-10) ... Removing mariadb-common (1:11.4.3-1) ... update-alternatives: using /etc/mysql/my.cnf.fallback to provide /etc/mysql/my.cnf (my.cnf) in auto mode Removing menu (2.1.50) ... Removing mlv-smile (1.47-8) ... Removing mpi-default-bin (1.17) ... Removing muscle (1:5.1.0-1) ... Removing mustang (3.2.4-1) ... Removing mysql-common (5.8+1.1.1) ... Removing ncbi-data (6.1.20170106+dfsg2-4) ... Removing ncbi-epcr (2.3.12-1-10) ... Removing ncbi-vdb-data (3.0.2+dfsg-2) ... Removing ncoils (2002-9) ... Removing node-highlight.js (9.18.5+dfsg1-2) ... Removing r-cran-covr (3.6.4+dfsg-1) ... Removing node-jquery (3.6.1+dfsg+~3.5.14-1) ... Removing node-jquery-ui (1.13.2+dfsg-1) ... Removing nodejs-doc (20.17.0+dfsg-2) ... Removing pal2nal (14.1-3) ... Removing paml (4.9j+dfsg-5) ... Removing paraclu (10-1) ... Removing parsinsert (1.04-15) ... Removing patch (2.7.6-7) ... Removing perm (0.4.0-8+b1) ... Removing phylip (1:3.697+dfsg-4) ... Removing phyutility (2.7.3+dfsg-4) ... Removing plink (1.07+dfsg-4+b1) ... Removing plink1.9 (1.90~b7.2-231211-1) ... Removing poa (2.0+20060928-9) ... Removing pocketsphinx-en-us (0.8+5prealpha+1-15) ... Removing poppler-data (0.4.12-1) ... Removing prank (0.0.170427+dfsg-3) ... Removing primer3 (2.6.1-4) ... Removing probabel (0.5.0+dfsg-6) ... Removing probalign (1.4-10) ... Removing probcons (1.12-14) ... Removing proda (1.0-14) ... Removing prodigal (1:2.6.3-6) ... Removing psmisc (23.7-1) ... Removing publicsuffix (20231001.0357-0.1) ... Removing python3-babel (2.14.0-1) ... 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Removing r-bioc-biocversion (3.19.1-1) ... Removing r-cran-acepack (1.4.2-1) ... Removing r-cran-actuar (3.3-4-1) ... Removing r-cran-polycor (0.8-1-1) ... Removing r-cran-admisc (0.36-1) ... Removing r-cran-aer (1.2-12-1) ... Removing r-cran-amelia (1.8.2-1) ... Removing r-cran-phangorn (2.11.1+dfsg-1) ... Removing r-cran-ape (5.8-1) ... Removing r-cran-arm (1.14-4-1) ... Removing r-cran-credentials (2.0.1-1) ... Removing r-cran-whoami (1.3.0-2) ... Removing r-cran-lintr (3.1.2-1) ... Removing r-cran-mlr (2.19.1+dfsg-1) ... Removing r-cran-paramhelpers (1.14.1-1) ... Removing r-cran-r.devices (2.17.2+ds-1) ... Removing r-cran-batchjobs (1.9-1) ... Removing r-cran-sendmailr (1.4-0-1) ... Removing r-cran-base64url (1.4-2+b1) ... Removing r-cran-bayesfactor (0.9.12-4.7+dfsg-1) ... Removing r-cran-bayesplot (1.11.1-1) ... Removing r-cran-parallelmap (1.5.1-1) ... Removing r-cran-bbmisc (1.13-1) ... Removing r-cran-emdbook (1.3.13+ds-1) ... Removing r-cran-bbmle (1.0.25.1-1) ... 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Removing libxtst6:amd64 (2:1.2.3-1.1+b1) ... Removing libyuv0:amd64 (0.0.1888.20240710-3) ... Removing libzzip-0-13t64:amd64 (0.13.72+dfsg.1-1.2+b1) ... Removing openmpi-common (4.1.6-13.3) ... Removing pandoc-data (3.1.3-3) ... Removing proj-data (9.5.0-1) ... Removing python3-certifi (2024.8.30-1) ... Removing python3-chardet (5.2.0+dfsg-1) ... Removing python3-charset-normalizer (3.3.2-4) ... Removing python3-idna (3.8-2) ... Removing python3-urllib3 (2.0.7-2) ... Removing r-bioc-biocgenerics (0.50.0-2) ... Removing r-cran-httr (1.4.7+dfsg-1) ... Removing r-cran-openssl (2.2.0+dfsg-1) ... Removing r-cran-askpass (1.2.0-1) ... Removing r-cran-rio (1.2.2-1) ... Removing r-cran-haven (2.5.4-1) ... Removing r-cran-readr (2.1.5-1) ... Removing r-cran-vroom (1.6.5-1) ... Removing r-cran-bit64 (4.0.5-1) ... Removing r-cran-bit (4.0.5-1) ... Removing r-cran-doby (4.6.22-2) ... Removing r-cran-boot (1.3-31-1) ... Removing r-cran-testthat (3.2.1.1-1) ... Removing r-cran-brio (1.1.5-1) ... Removing r-cran-modelr (0.1.11-1) ... Removing r-cran-broom (1.0.6+dfsg-1) ... Removing r-cran-cardata (3.0.5-1) ... Removing r-cran-quantreg (5.98-1) ... Removing r-cran-conquer (1.3.3-1) ... Removing r-cran-caret (6.0-94+dfsg-1) ... Removing r-cran-readxl (1.4.3-1) ... Removing r-cran-cellranger (1.1.0-3) ... Removing r-cran-checkmate (2.3.1-1) ... Removing r-cran-recipes (1.0.10+dfsg-2) ... Removing r-cran-ipred (0.9-15-1) ... Removing r-cran-waldo (0.5.3-1) ... Removing r-cran-tweenr (2.0.3-1) ... Removing r-cran-clipr (0.8.0-1) ... Removing r-cran-clock (0.7.0-1.1) ... Removing r-cran-prodlim (2024.06.25-1) ... Removing r-cran-lava (1.7.3+dfsg-1) ... Removing r-cran-future.apply (1.11.2+dfsg-1) ... Removing r-cran-future (1.34.0+dfsg-1) ... Removing r-cran-globals (0.16.3-1) ... Removing r-cran-foreach (1.5.2-1) ... Removing r-cran-codetools (0.2-20-1) ... Removing r-cran-cowplot (1.1.3+dfsg-1) ... Removing r-cran-tzdb (0.4.0-2) ... Removing r-cran-lubridate (1.9.3+dfsg-1) ... Removing r-cran-timechange (0.3.0-1) ... Removing r-cran-diffobj (0.3.5-1+b1) ... Removing r-cran-progress (1.2.3-1) ... Removing r-cran-modelmetrics (1.2.2.2-1+b1) ... Removing r-cran-data.table (1.15.4+dfsg-2.2) ... Removing r-cran-deoptimr (1.1-3-1) ... Removing r-cran-deriv (4.1.6-1) ... Removing r-cran-pkgload (1.4.0-1) ... Removing r-cran-diagram (1.6.5-2) ... Removing r-cran-e1071 (1.7-16-1) ... Removing r-cran-forcats (1.0.0-1) ... Removing r-cran-ellipsis (0.3.2-2) ... Removing r-cran-rematch2 (2.1.2-2) ... Removing r-cran-foreign (0.8.87-1) ... Removing r-cran-ggplot2 (3.5.1+dfsg-1) ... Removing r-cran-gower (1.0.1-1) ... Removing r-cran-gtable (0.3.5+dfsg-1) ... Removing r-cran-hardhat (1.4.0+dfsg-1) ... Removing r-cran-hms (1.1.3-1) ... Removing r-cran-isoband (0.2.7-1) ... Removing r-cran-iterators (1.0.14-1) ... Removing r-cran-kernsmooth (2.23-24-1) ... Removing r-cran-zoo (1.8-12-2) ... Removing r-cran-lazyeval (0.2.2-1+b1) ... Removing r-cran-listenv (0.9.1+dfsg-1) ... Removing r-cran-matrixmodels (0.5-3-1) ... Removing r-cran-matrixstats (1.4.1-1) ... Removing r-cran-mgcv (1.9-1-1) ... Removing r-cran-microbenchmark (1.5.0-1) ... Removing r-cran-minqa (1.2.8-1) ... Removing r-cran-nlme (3.1.166-1) ... Removing r-cran-nnet (7.3-19-2) ... Removing r-cran-numderiv (2016.8-1.1-3) ... Removing r-cran-openxlsx (4.2.7-1) ... Removing r-cran-parallelly (1.38.0-1) ... Removing r-cran-pkgbuild (1.4.4-1) ... Removing r-cran-rcpparmadillo (14.0.2-1-1) ... Removing r-cran-rcppeigen (0.3.4.0.2-1) ... Removing r-cran-reshape2 (1.4.4-2) ... Removing r-cran-praise (1.0.0-4) ... Removing r-cran-prettyunits (1.2.0-1) ... Removing r-cran-proc (1.18.5-1) ... Removing r-cran-progressr (0.14.0-1) ... Removing r-cran-proxy (0.4-27-1) ... Removing r-cran-r.utils (2.12.3-1) ... Removing r-cran-r.oo (1.26.0-1) ... Removing r-cran-r.methodss3 (1.8.2-1) ... Removing r-cran-rematch (2.0.0-1) ... Removing r-cran-rprojroot (2.0.4-1) ... Removing r-cran-shape (1.4.6-1) ... Removing r-cran-sparsem (1.84-2-1+b1) ... Removing r-cran-squarem (2021.1-1) ... Removing r-cran-statmod (1.5.0-1) ... Removing r-cran-sys (3.4.2-1) ... Removing r-cran-timedate (4032.109-1) ... Removing r-cran-tinytex (0.51-1) ... Removing r-cran-writexl (1.5.0-1) ... Removing r-cran-zip (2.3.1-1) ... Removing tex-common (6.18) ... Removing t1utils (1.41-4) ... Removing xkb-data (2.42-1) ... Removing libopenmpi3t64:amd64 (4.1.6-13.3) ... Removing libucx0:amd64 (1.17.0+ds-3) ... Removing libfabric1:amd64 (1.17.0-3+b1) ... Removing librdmacm1t64:amd64 (52.0-2) ... Removing libatk1.0-0t64:amd64 (2.54.0-1) ... Removing at-spi2-common (2.54.0-1) ... Removing r-cran-rpart (4.1.23-1) ... Removing r-cran-survival (3.7-0-1) ... Removing r-cran-matrix (1.7-0-3) ... Removing r-cran-shiny (1.8.1.1+dfsg-1) ... Removing fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... Removing ibverbs-providers:amd64 (52.0-2) ... Removing r-cran-bslib (0.7.0+dfsg-1) ... Removing libjs-bootstrap4 (4.6.1+dfsg1-4) ... Removing libjs-popper.js (1.16.1+ds-6) ... Removing javascript-common (11+nmu1) ... Removing libabsl20230802:amd64 (20230802.1-4) ... Removing libamdhip64-5 (5.7.1-3) ... Removing libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b1) ... Removing libcurl3t64-gnutls:amd64 (8.9.1-2) ... Removing r-cran-curl (5.2.2+dfsg-1) ... Removing libhsa-runtime64-1:amd64 (5.7.1-3) ... Removing libhsakmt1:amd64 (5.7.0-1) ... Removing mesa-libgallium:amd64 (24.2.2-1) ... Removing libdrm-intel1:amd64 (2.4.123-1) ... Removing libdrm-radeon1:amd64 (2.4.123-1) ... Removing libllvm18:amd64 (1:18.1.8-11) ... Removing libelf1t64:amd64 (0.191-2) ... Removing libpmix2t64:amd64 (5.0.3-2) ... Removing libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-10) ... Removing libevent-core-2.1-7t64:amd64 (2.1.12-stable-10) ... Removing libglapi-mesa:amd64 (24.2.2-1) ... Removing libhwloc-plugins:amd64 (2.11.0-2) ... Removing libhwloc15:amd64 (2.11.0-2) ... Removing libibmad5:amd64 (52.0-2) ... Removing libibumad3:amd64 (52.0-2) ... Removing r-cran-tidyr (1.3.1-1) ... Removing r-cran-stringr (1.5.1-1) ... Removing r-cran-stringi (1.8.4-1) ... Removing libjs-d3 (3.5.17-4) ... Removing libjs-es5-shim (4.6.7-2) ... Removing r-cran-knitr (1.48+dfsg-1) ... Removing r-cran-highr (0.11+dfsg-1) ... Removing libjs-highlight.js (9.18.5+dfsg1-2) ... Removing r-cran-jquerylib (0.1.4+dfsg-4) ... Removing libjs-jquery-datatables (1.11.5+dfsg-2) ... Removing libjs-jquery-selectize.js (0.12.6+dfsg-1.1) ... Removing libjs-jquery-ui (1.13.2+dfsg-1) ... Removing libjs-json (0~20221030+~1.0.8-1) ... Removing libjs-microplugin.js (0.0.3+dfsg-1.1) ... Removing libjs-sifter.js (0.6.0+dfsg-3) ... Removing libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4.1) ... Removing libllvm17t64:amd64 (1:17.0.6-18) ... Removing libmunge2:amd64 (0.5.15-4) ... Removing libnghttp3-9:amd64 (1.4.0-1) ... Removing libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ... Removing libngtcp2-16:amd64 (1.6.0-1) ... Removing libpsm2-2 (11.2.185-2.1) ... Removing libnuma1:amd64 (2.0.18-1) ... Removing libpciaccess0:amd64 (0.17-3+b1) ... Removing libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: warning: alternative /usr/lib/libpsm1/libpsm_infinipath.so.1.16 (part of link group libpsm_infinipath.so.1) doesn't exist; removing from list of alternatives update-alternatives: warning: /etc/alternatives/libpsm_infinipath.so.1 is dangling; it will be updated with best choice Removing libsensors5:amd64 (1:3.6.0-10) ... Removing libsensors-config (1:3.6.0-10) ... Removing r-cran-httpuv (1.6.15+dfsg-1) ... Removing libxcb-dri3-0:amd64 (1.17.0-2) ... Removing libxnvctrl0:amd64 (535.171.04-1) ... Removing libz3-4:amd64 (4.8.12-3.1+b2) ... Removing node-bootstrap-sass (3.4.3-2) ... Removing node-html5shiv (3.7.3+dfsg-5) ... Removing node-normalize.css (8.0.1-5) ... Removing ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Removing r-cran-backports (1.4.1-1) ... Removing r-cran-memoise (2.0.1-1) ... Removing r-cran-cachem (1.1.0-1) ... Removing r-cran-callr (3.7.6-1) ... Removing r-cran-class (7.3-22-2) ... Removing r-cran-scales (1.3.0-1) ... Removing r-cran-munsell (0.5.1-1) ... Removing r-cran-colorspace (2.1-0+dfsg-1) ... Removing r-cran-commonmark (1.9.1-1) ... Removing r-cran-cpp11 (0.4.7-1) ... Removing r-cran-crayon (1.5.2-1) ... Removing r-cran-desc (1.4.3-1) ... Removing r-cran-dplyr (1.1.4-1) ... Removing r-cran-evaluate (0.24.0-1) ... Removing r-cran-tibble (3.2.1+dfsg-2) ... Removing r-cran-pillar (1.9.0+dfsg-1) ... Removing r-cran-fansi (1.0.5-1) ... Removing r-cran-farver (2.1.2-1) ... Removing r-cran-promises (1.3.0+dfsg-1) ... Removing r-cran-fontawesome (0.5.2-1) ... Removing r-cran-sass (0.4.9+dfsg-1) ... Removing r-cran-generics (0.1.3-1) ... Removing r-cran-tidyselect (1.2.1+dfsg-1) ... Removing r-cran-jsonlite (1.8.8+dfsg-1) ... Removing r-cran-labeling (0.4.3-1) ... Removing r-cran-later (1.3.2+dfsg-1) ... Removing r-cran-lattice (0.22-6-1) ... Removing r-cran-purrr (1.0.2-1) ... Removing r-cran-magrittr (2.0.3-1) ... Removing r-cran-mass (7.3-61-1) ... Removing r-cran-mime (0.12-2) ... Removing r-cran-pkgconfig (2.0.3-2) ... Removing r-cran-plyr (1.8.9-1) ... Removing r-cran-processx (3.8.4-1) ... Removing r-cran-ps (1.7.7-1) ... Removing r-cran-r6 (2.5.1-1) ... Removing r-cran-rappdirs (0.3.3-1) ... Removing r-cran-rcolorbrewer (1.1-3-1) ... Removing r-cran-sourcetools (0.1.7-1-1) ... Removing r-cran-utf8 (1.2.4-1) ... Removing r-cran-viridislite (0.4.2-2) ... Removing r-cran-withr (3.0.0+dfsg-1) ... Removing r-cran-xfun (0.47+dfsg-1) ... Removing r-cran-xtable (1:1.8-4-2) ... Removing r-cran-yaml (2.3.10-1) ... Removing libibverbs1:amd64 (52.0-2) ... Removing adduser (3.137) ... Removing libjs-bootstrap (3.4.1+dfsg-3) ... Removing fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Removing libjs-mathjax (2.7.9+dfsg-1) ... Removing fonts-mathjax (2.7.9+dfsg-1) ... Removing libdrm-amdgpu1:amd64 (2.4.123-1) ... Removing libdrm2:amd64 (2.4.123-1) ... Removing libdrm-common (2.4.123-1) ... Removing libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Removing libnl-route-3-200:amd64 (3.7.0-0.3) ... Removing libnl-3-200:amd64 (3.7.0-0.3) ... Removing r-cran-fs (1.6.4+dfsg-1) ... Removing r-cran-rcpp (1.0.13-1) ... Removing r-cran-vctrs (0.6.5-1) ... Removing r-cran-htmltools (0.5.8.1-1) ... Removing r-cran-fastmap (1.2.0-1) ... Removing r-cran-lifecycle (1.0.4+dfsg-1) ... Removing r-cran-littler (0.3.20-1) ... Removing r-cran-pkgkitten (0.2.4-1) ... Removing r-cran-rlang (1.1.4-1) ... Removing r-cran-base64enc (0.1-3-3) ... Removing r-cran-cli (3.6.3-1) ... Removing r-cran-digest (0.6.37-1) ... Removing r-cran-glue (1.7.0-1) ... Removing r-base-core (4.4.1-3) ... Removing libpangocairo-1.0-0:amd64 (1.54.0+ds-2) ... Removing libpangoft2-1.0-0:amd64 (1.54.0+ds-2) ... Removing libpango-1.0-0:amd64 (1.54.0+ds-2) ... Removing fontconfig (2.15.0-1.1) ... Removing libtk8.6:amd64 (8.6.14-1) ... Removing libxft2:amd64 (2.3.6-1+b1) ... Removing libcairo2:amd64 (1.18.2-1) ... Removing libcurl4t64:amd64 (8.9.1-2) ... Removing libthai0:amd64 (0.1.29-2) ... Removing libdatrie1:amd64 (0.2.13-3) ... Removing libtiff6:amd64 (4.5.1+git230720-5) ... Removing libdeflate0:amd64 (1.21-1) ... Removing libfribidi0:amd64 (1.0.15-1) ... Removing libgomp1:amd64 (14.2.0-3) ... Removing libharfbuzz0b:amd64 (9.0.0-1) ... Removing libgraphite2-3:amd64 (1.3.14-2) ... Removing libxt6t64:amd64 (1:1.2.1-1.2) ... Removing libsm6:amd64 (2:1.2.3-1+b1) ... Removing libice6:amd64 (2:1.0.10-1+b1) ... Removing libjbig0:amd64 (2.1-6.1+b1) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-3) ... Removing libldap-2.5-0:amd64 (2.5.18+dfsg-3) ... Removing liblerc4:amd64 (4.0.0+ds-4+b1) ... Removing libpaper-utils (1.1.29+b1) ... Removing libpaper1:amd64 (1.1.29+b1) ... Removing libpixman-1-0:amd64 (0.42.2-1+b1) ... Removing libpsl5t64:amd64 (0.21.2-1.1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Removing libwebp7:amd64 (1.4.0-0.1) ... Removing libssh2-1t64:amd64 (1.11.0-7) ... Removing libtcl8.6:amd64 (8.6.14+dfsg-1) ... Removing libthai-data (0.1.29-2) ... Removing libxcb-render0:amd64 (1.17.0-2) ... Removing libxcb-shm0:amd64 (1.17.0-2) ... Removing libxrender1:amd64 (1:0.9.10-1.1+b1) ... Removing libxss1:amd64 (1:1.2.3-1+b1) ... Removing ucf (3.0043+nmu1) ... Removing sensible-utils (0.0.24) ... Removing unzip (6.0-28) ... Removing xdg-utils (1.1.3-4.1) ... Removing zip (3.0-14) ... Removing libfontconfig1:amd64 (2.15.0-1.1) ... Removing fontconfig-config (2.15.0-1.1) ... Removing fonts-urw-base35 (20200910-8) ... Removing libglib2.0-0t64:amd64 (2.82.1-1) ... Removing libatomic1:amd64 (14.2.0-3) ... Removing xfonts-utils (1:7.7+7) ... Removing libfontenc1:amd64 (1:1.1.8-1) ... Removing libfreetype6:amd64 (2.13.3+dfsg-1) ... Removing libpng16-16t64:amd64 (1.6.44-1) ... Removing libxext6:amd64 (2:1.3.4-1+b1) ... Removing xfonts-encodings (1:1.0.4-2.2) ... Removing x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libx11-6:amd64 (2:1.8.7-1+b1) ... Removing libx11-data (2:1.8.7-1) ... Removing libxcb1:amd64 (1.17.0-2) ... Removing libxau6:amd64 (1:1.0.9-1+b1) ... Removing libxdmcp6:amd64 (1:1.1.2-3+b1) ... Removing nodejs (20.17.0+dfsg-2) ... Removing ruby3.1 (3.1.2-8.4) ... Removing rubygems-integration (1.18) ... Removing dmsetup (2:1.02.196-1+b1) ... Removing libdevmapper1.02.1:amd64 (2:1.02.196-1+b1) ... Removing libguava-java (32.0.1-1) ... Removing liberror-prone-java (2.18.0-1) ... Removing libatinject-jsr330-api-java (1.0+ds1-5) ... Removing libnode115:amd64 (20.17.0+dfsg-2) ... Removing libbrotli1:amd64 (1.1.0-2+b4) ... Removing libcares2:amd64 (1.33.1-1) ... Removing libwww-perl (6.77-1) ... Removing libhttp-negotiate-perl (6.01-2) ... Removing libheif1:amd64 (1.18.1-2) ... Removing libheif-plugin-dav1d:amd64 (1.18.1-2) ... Removing libdav1d7:amd64 (1.4.3-1) ... Removing ruby-sdbm:amd64 (1.0.0-5+b4) ... Removing libwww-robotrules-perl (6.02-1) ... Removing python3-fonttools (4.46.0-1+b1) ... Removing python3-fs (2.4.16-4) ... Removing python3-sympy (1.13.2-1) ... Removing libfile-listing-perl (6.16-1) ... Removing libhttp-cookies-perl (6.11-1) ... Removing libhtml-tree-perl (5.07-3) ... Removing libhtml-parser-perl:amd64 (3.83-1) ... Removing libhtml-tagset-perl (3.24-1) ... Removing liblwp-protocol-https-perl (6.14-1) ... Removing libio-socket-ssl-perl (2.089-1) ... Removing libjsr305-java (0.1~+svn49-11) ... Removing tasksel-data (3.75) ... Removing libnet-http-perl (6.23-1) ... Removing libnet-ssleay-perl:amd64 (1.94-1+b1) ... Removing libnghttp2-14:amd64 (1.63.0-1) ... Removing libsharpyuv0:amd64 (1.4.0-0.1) ... Removing libtry-tiny-perl (0.32-1) ... Removing libuv1t64:amd64 (1.48.0-6) ... Removing python3-lxml:amd64 (5.3.0-1) ... Removing libxslt1.1:amd64 (1.1.35-1.1) ... Removing node-acorn (8.8.1+ds+~cs25.17.7-2) ... Removing node-minimatch (9.0.3-5) ... Removing node-brace-expansion (2.0.1+~1.1.0-1) ... Removing node-balanced-match (2.0.0-1) ... Removing node-cjs-module-lexer (1.2.3+dfsg-1) ... Removing node-undici (5.28.4+dfsg1+~cs23.12.11-2) ... Removing node-xtend (4.0.2-3) ... Removing perl-openssl-defaults:amd64 (7+b2) ... Removing python3-appdirs (1.4.4-4) ... Removing python3-brotli (1.1.0-2+b4) ... Removing python3-lz4 (4.0.2+dfsg-1+b4) ... Removing python3-mpmath (1.3.0-1) ... Removing python3-six (1.16.0-7) ... Removing python3-tz (2024.1-2) ... Removing python3-unicodedata2 (15.1.0+ds-1+b2) ... Removing unicode-data (15.1.0-1) ... Removing libruby3.1t64:amd64 (3.1.2-8.4) ... Removing rake (13.2.1-1) ... Removing ruby (1:3.1+nmu1) ... Removing ruby-rubygems (3.4.20-1) ... Removing ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing python3-scipy (1.13.1-5) ... Removing libhttp-message-perl (6.46-1) ... Removing libclone-perl:amd64 (0.47-1) ... Removing libheif-plugin-libde265:amd64 (1.18.1-2) ... Removing libde265-0:amd64 (1.0.15-1+b2) ... Removing libedit2:amd64 (3.1-20240808-1) ... Removing libencode-locale-perl (1.05-3) ... Removing liburi-perl (5.29-1) ... Removing python3-ufolib2 (0.16.0+dfsg1-1) ... Removing libhttp-date-perl (6.06-1) ... Removing libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Removing libicu72:amd64 (72.1-5) ... Removing libio-html-perl (1.004-3) ... Removing liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Removing tasksel (3.75) ... Removing liblocale-gettext-perl (1.07-7) ... Removing liblwp-mediatypes-perl (6.04-2) ... Removing libncurses6:amd64 (6.5-2) ... Removing libruby:amd64 (1:3.1+nmu1) ... Removing libtimedate-perl (2.3300-2) ... Removing libyaml-0-2:amd64 (0.2.5-1+b1) ... Removing openssl (3.3.2-1) ... Removing python3-attr (23.2.0-2) ... Removing python3-decorator (5.1.1-5) ... Removing python3-numpy (1:1.26.4+ds-11) ... Removing ruby-net-telnet (0.2.0-1) ... Removing ruby-xmlrpc (0.3.3-2) ... Removing ruby-webrick (1.8.1-1) ... Removing python3-pkg-resources (74.1.2-2) ... Removing python3-inflect (7.3.1-2) ... Removing python3-typeguard (4.3.0-1) ... Removing perl (5.38.2-5) ... Removing libperl5.38t64:amd64 (5.38.2-5) ... Removing libgdbm-compat4t64:amd64 (1.24-2) ... Removing libgdbm6t64:amd64 (1.24-2) ... Removing libopenblas0-pthread:amd64 (0.3.28+ds-2) ... Removing perl-modules-5.38 (5.38.2-5) ... Removing python3-autocommand (2.2.2-3) ... Removing python3-jaraco.context (6.0.0-1) ... Removing python3-jaraco.functools (4.0.2-1) ... Removing python3-more-itertools (10.4.0-1) ... Removing python3-typing-extensions (4.12.2-2) ... Removing python3 (3.12.5-1+b1) ... Removing python3.12 (3.12.6-1) ... Removing python3-minimal (3.12.5-1+b1) ... Removing python3.12-minimal (3.12.6-1) ... Removing libexpat1:amd64 (2.6.3-1) ... Removing libgfortran5:amd64 (14.2.0-3) ... Removing libpython3-stdlib:amd64 (3.12.5-1+b1) ... Removing libpython3.12-stdlib:amd64 (3.12.6-1) ... find: '/usr/lib/python3': No such file or directory Removing libncursesw6:amd64 (6.5-2) ... Removing libnsl2:amd64 (1.3.0-3+b2) ... Removing libpython3.12-minimal:amd64 (3.12.6-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.2-5) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsqlite3-0:amd64 (3.46.0-1) ... Removing libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Removing libtirpc-common (1.3.4+ds-1.3) ... Removing media-types (10.1.0) ... Removing netbase (6.4) ... Removing readline-common (8.2-5) ... Removing libgssapi-krb5-2:amd64 (1.21.3-3) ... Removing libkrb5-3:amd64 (1.21.3-3) ... Removing libk5crypto3:amd64 (1.21.3-3) ... Removing libkeyutils1:amd64 (1.6.3-3) ... Removing libkrb5support0:amd64 (1.21.3-3) ... Processing triggers for base-files (13.5) ... Processing triggers for libc-bin (2.40-2) ... 14m14.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', 'remove', 'abyss', 'adduser', 'adwaita-icon-theme', 'aevol', 'alien-hunter', 'alsa-topology-conf', 'alsa-ucm-conf', 'altree', 'amap-align', 'apache2-bin', 'aragorn', 'arden', 'at-spi2-common', 'at-spi2-core', 'autodock', 'autodock-vina', 'autogrid', 'bamtools', 'bc', 'bcalm', 'bcftools', 'bedtools', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bioperl', 'bioperl-run', 'biosquid', 'blends-common', 'blt', 'bowtie', 'bowtie2', 'boxshade', 'bsdextrautils', 'build-essential', 'bwa', 'bzip2', 'bzip2-doc', 'ca-certificates', 'ca-certificates-java', 'cassiopee', 'cd-hit', 'cdbfasta', 'circos', 'circos-tools', 'clearcut', 'clonalframe', 'clustalo', 'clustalw', 'concavity', 'conservation-code', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'datamash', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jdk-headless', 'default-jre', 'default-jre-headless', 'dialign', 'dialign-tx', 'dialign-tx-data', 'dictionaries-common', 'dirmngr', 'discosnp', 'disulfinder', 'disulfinder-data', 'dmidecode', 'dmsetup', 'dnaclust', 'docutils-common', 'dpkg-dev', 'dssp', 'dvisvgm', 'emacsen-common', 'embassy-domainatrix', 'embassy-domalign', 'embassy-domsearch', 'emboss', 'emboss-data', 'emboss-lib', 'exonerate', 'fakeroot', 'fastdnaml', 'fastlink', 'fastqc', 'fasttree', 'file', 'fitgcp', 'flexbar', 'fontconfig', 'fontconfig-config', 'fonts-circos-symbols', 'fonts-cmu', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-droid-fallback', 'fonts-font-awesome', 'fonts-glyphicons-halflings', 'fonts-lato', 'fonts-liberation', 'fonts-liberation-sans-narrow', 'fonts-lmodern', 'fonts-lyx', 'fonts-mathjax', 'fonts-noto-mono', 'fonts-urw-base35', 'freecontact', 'fsa', 'g++-', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gasic', 'gatb-core', 'gawk', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'gdal-data', 'gdal-plugins:amd64', 'genometools', 'genometools-common', 'gff2aplot', 'gff2ps', 'gfortran', 'gfortran-14', 'gfortran-14-x86-64-linux-gnu', 'gfortran-x86-64-linux-gnu', 'ghostscript', 'glam2', 'gmap', 'gnupg', 'gnupg-l10n', 'gnupg-utils', 'gpg', 'gpg-agent', 'gpg-wks-client', 'gpgconf', 'gpgsm', 'graphicsmagick', 'graphviz', 'grinder', 'gromacs', 'gromacs-data', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hhsuite', 'hhsuite-data', 'hicolor-icon-theme', 'hisat2', 'hmmer', 'hunspell-en-gb', 'hunspell-en-us', 'i965-va-driver:amd64', 'ibverbs-providers:amd64', 'icu-devtools', 'idba', 'imagemagick', 'imagemagick-6-common', 'imagemagick-6.q16', 'infernal', 'intel-media-va-driver:amd64', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'java-wrappers', 'javascript-common', 'jellyfish', 'kalign', 'kissplice', 'krb5-locales', 'lagan', 'laptop-detect', 'last-align', 'lib32gcc-s1', 'lib32stdc++6', 'libaacs0:amd64', 'libabsl20230802:amd64', 'libace-perl', 'libaec0:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl:amd64', 'libalgorithm-merge-perl', 'libalgorithm-munkres-perl', 'libamd-comgr2:amd64', 'libamd3:amd64', 'libamdhip64-5', 'libann0', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache-pom-java', 'libapache2-mod-perl2', 'libapache2-reload-perl', 'libapparmor1:amd64', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libargtable2-0', 'libarmadillo14', 'libarpack2t64:amd64', 'libarray-compare-perl', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libass9:amd64', 'libassuan9:amd64', 'libasyncns0:amd64', 'libatinject-jsr330-api-java', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libauthen-sasl-perl', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavcodec61:amd64', 'libavfilter10:amd64', 'libavformat61:amd64', 'libavif16:amd64', 'libavutil59:amd64', 'libb-hooks-endofscope-perl', 'libb-hooks-op-check-perl:amd64', 'libbambamc0:amd64', 'libbamtools2.5.2:amd64', 'libbarclay-java', 'libbdplus0:amd64', 'libbibtex-parser-perl', 'libbinutils:amd64', 'libbio-asn1-entrezgene-perl', 'libbio-cluster-perl', 'libbio-eutilities-perl', 'libbio-featureio-perl', 'libbio-perl-perl', 'libbio-perl-run-perl', 'libbio-tools-run-remoteblast-perl', 'libbio-variation-perl', 'libbiojava-java', 'libbiojava1.9-java', 'libbit-vector-perl:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libbluray2:amd64', 'libboost-dev:amd64', 'libboost-filesystem1.83.0:amd64', 'libboost-mpi1.83.0', 'libboost-program-options1.83.0:amd64', 'libboost-serialization1.83.0:amd64', 'libboost-thread1.83.0:amd64', 'libboost1.83-dev:amd64', 'libbrotli1:amd64', 'libbs2b0:amd64', 'libbsd-resource-perl', 'libbytecode-java', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libc6-i386', 'libcache-cache-perl', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcapture-tiny-perl', 'libcares2:amd64', 'libcarp-always-perl', 'libcarp-clan-perl', 'libcassie1v5', 'libcbor0.10:amd64', 'libcc1-0:amd64', 'libcdt5:amd64', 'libcfitsio10t64:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcgraph6:amd64', 'libchromaprint1:amd64', 'libcifpp-data', 'libcifpp5:amd64', 'libcjson1:amd64', 'libclang-common-18-dev:amd64', 'libclang-cpp18', 'libclang-rt-18-dev:amd64', 'libclass-data-inheritable-perl', 'libclass-inspector-perl', 'libclass-method-modifiers-perl', 'libclass-xsaccessor-perl', 'libclc-18', 'libclc-18-dev', 'libclone-perl:amd64', 'libcloudproviders0:amd64', 'libcodec2-1.2:amd64', 'libcolamd3:amd64', 'libcolord2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-collections3-java', 'libcommons-compress-java', 'libcommons-dbcp-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libcommons-pool-java', 'libconfig-general-perl', 'libconvert-binary-c-perl', 'libconvert-binhex-perl', 'libcppunit-1.15-0:amd64', 'libcrypt-dev:amd64', 'libcrypt-rc4-perl', 'libcryptsetup12:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdata-dump-perl', 'libdata-dumper-simple-perl', 'libdata-stag-perl', 'libdate-calc-perl', 'libdate-calc-xs-perl:amd64', 'libdate-manip-perl', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbd-mysql-perl:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate-dev:amd64', 'libdeflate0:amd64', 'libdevel-callchecker-perl:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libdevmapper1.02.1:amd64', 'libdigest-perl-md5-perl', 'libdivsufsort3:amd64', 'libdjvulibre-text', 'libdjvulibre21:amd64', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdvdnav4:amd64', 'libdvdread8t64:amd64', 'libdynaloader-functions-perl', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1t64:amd64', 'libencode-locale-perl', 'libencode-perl:amd64', 'libepoxy0:amd64', 'liberror-perl', 'liberror-prone-java', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfabric1:amd64', 'libfakeroot:amd64', 'libfcgi-bin', 'libfcgi-perl', 'libfcgi0t64:amd64', 'libfftw3-double3:amd64', 'libfftw3-single3:amd64', 'libfido2-1:amd64', 'libfile-basedir-perl', 'libfile-desktopentry-perl', 'libfile-fcntllock-perl', 'libfile-listing-perl', 'libfile-mimeinfo-perl', 'libfile-slurp-tiny-perl', 'libfile-sort-perl', 'libfindbin-libs-perl', 'libflac12t64:amd64', 'libflite1:amd64', 'libfont-afm-perl', 'libfont-ttf-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreecontact0t64:amd64', 'libfreemarker-java', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfreezethaw-perl', 'libfribidi0:amd64', 'libfyba0t64:amd64', 'libg20', 'libgatbcore3:amd64', 'libgatk-native-bindings-java', 'libgav1-1:amd64', 'libgbm1:amd64', 'libgcc-14-dev:amd64', 'libgclib3:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdal35:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-bin', 'libgdk-pixbuf2.0-common', 'libgeos-c1t64:amd64', 'libgeos3.13.0:amd64', 'libgeotiff5:amd64', 'libgetopt-euclid-perl', 'libgetopt-simple-perl', 'libgflags2.2', 'libgfortran-14-dev:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgit2-1.7:amd64', 'libgkl-java', 'libgkl-jni', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libgles2:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglpk40:amd64', 'libglu1-mesa:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgme0:amd64', 'libgomp1:amd64', 'libgoogle-glog0v6t64', 'libgoogle-gson-java', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraph-perl', 'libgraphics-colornames-perl', 'libgraphics-colorobject-perl', 'libgraphicsmagick-q16-3t64', 'libgraphite2-3:amd64', 'libgraphviz-perl', 'libgromacs9:amd64', 'libgs-common', 'libgs10:amd64', 'libgs10-common', 'libgsl28:amd64', 'libgslcblas0:amd64', 'libgsm1:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgts-0.7-5t64:amd64', 'libgts-bin', 'libguava-java', 'libgumbo2:amd64', 'libgvc6', 'libgvpr2:amd64', 'libharfbuzz0b:amd64', 'libhdf4-0-alt:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libheap-perl', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhmsbeagle1v5:amd64', 'libhpdf-2.3.0:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhtml-form-perl', 'libhtml-format-perl', 'libhtml-parser-perl:amd64', 'libhtml-tableextract-perl', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhtsjdk-java', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libhttp-parser2.9:amd64', 'libhttpclient-java', 'libhttpcore-java', 'libhunspell-1.7-0:amd64', 'libhwasan0:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libhwy1t64:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'libice6:amd64', 'libicu-dev:amd64', 'libicu72:amd64', 'libidn12:amd64', 'libigdgmm12:amd64', 'libijs-0.35:amd64', 'libimagequant0:amd64', 'libimath-3-1-29t64:amd64', 'libimport-into-perl', 'libio-all-perl', 'libio-compress-brotli-perl', 'libio-html-perl', 'libio-pty-perl', 'libio-sessiondata-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libio-stringy-perl', 'libipc-run-perl', 'libipc-sharelite-perl', 'libipc-system-simple-perl', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjbig2dec0:amd64', 'libjbzip2-java', 'libjcode-pm-perl', 'libjellyfish-2.0-2:amd64', 'libjgraph-java', 'libjgrapht0.8-java', 'libjoptsimple-java', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-bootstrap', 'libjs-bootstrap4', 'libjs-bootswatch', 'libjs-d3', 'libjs-es5-shim', 'libjs-highlight.js', 'libjs-jquery', 'libjs-jquery-datatables', 'libjs-jquery-datatables-extensions', 'libjs-jquery-selectize.js', 'libjs-jquery-ui', 'libjs-json', 'libjs-lunr', 'libjs-mathjax', 'libjs-microplugin.js', 'libjs-modernizr', 'libjs-popper.js', 'libjs-prettify', 'libjs-remark-slide', 'libjs-sifter.js', 'libjs-sizzle', 'libjs-twitter-bootstrap-datepicker', 'libjs-underscore', 'libjson-c5:amd64', 'libjsoncpp25:amd64', 'libjsr305-java', 'libjxl0.9:amd64', 'libjxr-tools', 'libjxr0t64:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1t64:amd64', 'libkmldom1t64:amd64', 'libkmlengine1t64:amd64', 'libkmod2:amd64', 'libkpathsea6:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libksba8:amd64', 'liblab-gamut1:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'liblatex-tounicode-perl', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblightcouch-java', 'liblilv-0-0:amd64', 'liblist-allutils-perl', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'liblist-someutils-perl', 'liblist-someutils-xs-perl:amd64', 'liblist-utilsby-perl', 'libllvm17t64:amd64', 'libllvm18:amd64', 'libllvmspirvlib18.1:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblog4j2-java', 'liblqr-1-0:amd64', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.1-0:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'liblzma-dev:amd64', 'libmagic-mgc', 'libmagic1t64:amd64', 'libmagick++-6.q16-9t64:amd64', 'libmagickcore-6.q16-7-extra:amd64', 'libmagickcore-6.q16-7t64:amd64', 'libmagickwand-6.q16-7t64:amd64', 'libmailtools-perl', 'libmariadb3:amd64', 'libmath-bezier-perl', 'libmath-derivative-perl', 'libmath-random-mt-perl', 'libmath-round-perl', 'libmath-spline-perl', 'libmath-tamuanova-perl', 'libmath-vec-perl', 'libmath-vecstat-perl', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmime-tools-perl', 'libminizip1t64:amd64', 'libmjson-java', 'libmldbm-perl', 'libmodule-implementation-perl', 'libmodule-runtime-perl', 'libmongodb-java', 'libmoo-perl', 'libmp3lame0:amd64', 'libmpc3:amd64', 'libmpfi0:amd64', 'libmpfr6:amd64', 'libmpg123-0t64:amd64', 'libmujs3:amd64', 'libmunge2:amd64', 'libmuparser2v5:amd64', 'libmysofa1:amd64', 'libnamespace-clean-perl', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncbi-wvdb3:amd64', 'libncbi6t64:amd64', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnet-dbus-perl', 'libnet-http-perl', 'libnet-smtp-ssl-perl', 'libnet-ssleay-perl:amd64', 'libnetcdf19t64:amd64', 'libnetpbm11t64:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnlopt0:amd64', 'libnode115:amd64', 'libnorm1t64:amd64', 'libnpth0t64:amd64', 'libnsl2:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libnumber-format-perl', 'libodbc2:amd64', 'libodbcinst2:amd64', 'libogdi4.1:amd64', 'libogg0:amd64', 'libole-storage-lite-perl', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libopenexr-3-1-30:amd64', 'libopengl0:amd64', 'libopenjp2-7:amd64', 'libopenmpi3t64:amd64', 'libopenmpt0t64:amd64', 'libopus0:amd64', 'libpackage-stash-perl', 'libpackage-stash-xs-perl:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libparams-classify-perl:amd64', 'libparams-validate-perl:amd64', 'libparse-recdescent-perl', 'libpathplan4:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpcre2-32-0:amd64', 'libpcre2-dev:amd64', 'libpcre2-posix3:amd64', 'libpcsclite1:amd64', 'libperl4-corelibs-perl', 'libperl5.38t64:amd64', 'libpgm-5.3-0t64:amd64', 'libpicard-java', 'libpixman-1-0:amd64', 'libpkgconf3:amd64', 'libplacebo349:amd64', 'libpmix2t64:amd64', 'libpng-dev:amd64', 'libpng-tools', 'libpng16-16t64:amd64', 'libpocketsphinx3:amd64', 'libpod-coverage-perl', 'libpod-parser-perl', 'libpoppler-cpp1:amd64', 'libpoppler140:amd64', 'libpostproc58:amd64', 'libpostscript-perl', 'libpotrace0:amd64', 'libpq5:amd64', 'libproc2-0:amd64', 'libproj25:amd64', 'libpsl5t64:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptexenc1:amd64', 'libpulse0:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqhull-r8.0:amd64', 'libqpdf29t64:amd64', 'libquadmath0:amd64', 'librabbitmq4:amd64', 'libraqm0:amd64', 'librav1e0.7:amd64', 'libraw23t64:amd64', 'librdmacm1t64:amd64', 'libre2-11:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'libreadonly-perl', 'libref-util-perl', 'libref-util-xs-perl', 'libregexp-common-perl', 'librhino-java', 'librist4:amd64', 'librole-tiny-perl', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'librtmp1:amd64', 'librttopo1:amd64', 'librubberband2:amd64', 'libruby:amd64', 'libruby3.1t64:amd64', 'libsamplerate0:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libserd-0-0:amd64', 'libset-intspan-perl', 'libset-object-perl', 'libset-scalar-perl', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libshine3:amd64', 'libsigsegv2:amd64', 'libslf4j-java', 'libsm6:amd64', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsndfile1:amd64', 'libsoap-lite-perl', 'libsodium23:amd64', 'libsord-0-0:amd64', 'libsort-naturally-perl', 'libsoxr0:amd64', 'libspatialite8t64:amd64', 'libspeex1:amd64', 'libsphinxbase3t64:amd64', 'libspiffy-perl', 'libspreadsheet-parseexcel-perl', 'libspreadsheet-writeexcel-perl', 'libsprng2', 'libsqlite3-0:amd64', 'libsquid1t64:amd64', 'libsquizz', 'libsratom-0-0:amd64', 'libsrt1.5-gnutls:amd64', 'libssh-4:amd64', 'libssh2-1t64:amd64', 'libstaden-read14t64:amd64', 'libstatistics-basic-perl', 'libstatistics-descriptive-perl', 'libstdc++-14-dev:amd64', 'libsub-exporter-progressive-perl', 'libsub-identify-perl', 'libsub-name-perl:amd64', 'libsub-quote-perl', 'libsub-uplevel-perl', 'libsuitesparseconfig7:amd64', 'libsuperlu6:amd64', 'libsvg-graph-perl', 'libsvg-perl', 'libsvtav1enc2:amd64', 'libswresample5:amd64', 'libswscale8:amd64', 'libsynctex2:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libtamuanova-0.2', 'libtask-weaken-perl', 'libtbb-dev:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libteckit0:amd64', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-pod-perl', 'libtest-requiresinternet-perl', 'libtest-warn-perl', 'libtexlua53-5:amd64', 'libtext-csv-perl', 'libtext-csv-xs-perl:amd64', 'libtext-diff-perl', 'libtext-format-perl', 'libtext-iconv-perl:amd64', 'libthai-data', 'libthai0:amd64', 'libtheora0:amd64', 'libtie-ixhash-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtre5:amd64', 'libtree-dagnode-perl', 'libtry-tiny-perl', 'libtsan2:amd64', 'libtwolame0:amd64', 'libtype-tiny-perl', 'libtype-tiny-xs-perl:amd64', 'libubsan1:amd64', 'libucx0:amd64', 'libudfread0:amd64', 'libunibreak6:amd64', 'libunicode-map-perl', 'libunwind8:amd64', 'liburi-perl', 'liburiparser1:amd64', 'libuv1t64:amd64', 'libva-drm2:amd64', 'libva-x11-2:amd64', 'libva2:amd64', 'libvariable-magic-perl', 'libvdpau-va-gl1:amd64', 'libvdpau1:amd64', 'libvidstab1.1:amd64', 'libvorbis0a:amd64', 'libvorbisenc2:amd64', 'libvorbisfile3:amd64', 'libvpl2', 'libvpx9:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwmflite-0.2-7:amd64', 'libwoff1:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx11-protocol-perl', 'libx11-xcb1:amd64', 'libx264-164:amd64', 'libx265-209:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces-c3.2t64:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-dom-perl', 'libxml-dom-xpath-perl', 'libxml-filter-buffertext-perl', 'libxml-libxml-perl', 'libxml-libxslt-perl:amd64', 'libxml-namespacesupport-perl', 'libxml-parser-perl', 'libxml-perl', 'libxml-regexp-perl', 'libxml-sax-base-perl', 'libxml-sax-expat-perl', 'libxml-sax-perl', 'libxml-sax-writer-perl', 'libxml-simple-perl', 'libxml-twig-perl', 'libxml-writer-perl', 'libxml-xpath-perl', 'libxml-xpathengine-perl', 'libxml2:amd64', 'libxmlrpc-lite-perl', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxnvctrl0:amd64', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxstring-perl:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxvidcore4:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyaml-libyaml-perl', 'libyaml-perl', 'libyuv0:amd64', 'libz3-4:amd64', 'libzimg2:amd64', 'libzix-0-0:amd64', 'libzmq5:amd64', 'libzvbi-common', 'libzvbi0t64:amd64', 'libzzip-0-13t64:amd64', 'linux-libc-dev', 'linux-sysctl-defaults', 'littler', 'lmodern', 'loki', 'lua-filesystem:amd64', 'lua-lpeg:amd64', 'lua-md5:amd64', 'luit', 'lynx', 'lynx-common', 'macs', 'mafft', 'mailcap', 'make', 'manpages', 'manpages-dev', 'mapsembler2', 'maq', 'mariadb-common', 'med-config', 'med-tasks', 'media-types', 'melting', 'menu', 'mesa-libgallium:amd64', 'mesa-opencl-icd:amd64', 'mesa-va-drivers:amd64', 'mesa-vdpau-drivers:amd64', 'mesa-vulkan-drivers:amd64', 'minia', 'mipe', 'mira-assembler', 'mira-rfam-12s-rrna', 'mlv-smile', 'mothur', 'mpi-default-bin', 'mrbayes', 'mummer', 'mupdf-tools', 'muscle', 'mustang', 'mysql-common', 'ncbi-blast+-', 'ncbi-blast+-legacy', 'ncbi-data', 'ncbi-epcr', 'ncbi-tools-bin', 'ncbi-vdb-data', 'ncoils', 'neobio', 'netbase', 'netpbm', 'node-acorn', 'node-balanced-match', 'node-bootstrap-sass', 'node-brace-expansion', 'node-cjs-module-lexer', 'node-highlight.js', 'node-html5shiv', 'node-jquery', 'node-jquery-ui', 'node-minimatch', 'node-normalize.css', 'node-undici', 'node-xtend', 'nodejs', 'nodejs-doc', 'ocl-icd-libopencl1:amd64', 'openjdk-21-jdk-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssl', 'pal2nal', 'paml', 'pandoc', 'pandoc-data', 'paraclu', 'parallel', 'parsinsert', 'patch', 'pdb2pqr', 'perl', 'perl-doc', 'perl-modules-5.38', 'perl-openssl-defaults:amd64', 'perl-tk', 'perm', 'phylip', 'phyml', 'phyutility', 'picard-tools', 'pinentry-curses', 'pkgconf:amd64', 'pkgconf-bin', 'plink', 'plink1.9', 'plink2', 'poa', 'pocketsphinx-en-us', 'poppler-data', 'prank', 'prime-phylo', 'primer3', 'probabel', 'probalign', 'probcons', 'procps', 'proda', 'prodigal', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python-babel-localedata', 'python-biopython-doc', 'python-matplotlib-data', 'python3', 'python3-appdirs', 'python3-argcomplete', 'python3-argh', 'python3-attr', 'python3-autocommand', 'python3-babel', 'python3-biomaj3-cli', 'python3-biomaj3-core', 'python3-biopython', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-cykhash', 'python3-dateutil', 'python3-decorator', 'python3-docutils', 'python3-elasticsearch', 'python3-fonttools', 'python3-freetype', 'python3-fs', 'python3-gffutils', 'python3-hisat2', 'python3-hmmlearn', 'python3-html5lib', 'python3-htseq', 'python3-idna', 'python3-importlib-metadata', 'python3-inflect', 'python3-iniconfig', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jinja2', 'python3-joblib', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-numpy', 'python3-olefile', 'python3-packaging', 'python3-pdb2pqr', 'python3-pdbx', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-pluggy', 'python3-propka', 'python3-psutil', 'python3-pybedtools', 'python3-pyfaidx', 'python3-pygments', 'python3-pyparsing', 'python3-pysam', 'python3-pytest', 'python3-reportlab', 'python3-requests', 'python3-rlpycairo', 'python3-roman', 'python3-rpy2', 'python3-scipy', 'python3-simplejson', 'python3-six', 'python3-sklearn', 'python3-sklearn-lib:amd64', 'python3-soupsieve', 'python3-sympy', 'python3-threadpoolctl', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-tzlocal', 'python3-ufolib2', 'python3-unicodedata2', 'python3-urllib3', 'python3-webencodings', 'python3-zipp', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'r-base-core', 'r-base-dev', 'r-bioc-biobase', 'r-bioc-biocgenerics', 'r-bioc-biocstyle', 'r-bioc-biocversion', 'r-bioc-edger', 'r-bioc-graph', 'r-bioc-hilbertvis', 'r-bioc-limma', 'r-cran-abind', 'r-cran-acepack', 'r-cran-actuar', 'r-cran-admisc', 'r-cran-aer', 'r-cran-afex', 'r-cran-amelia', 'r-cran-ape', 'r-cran-arm', 'r-cran-askpass', 'r-cran-av', 'r-cran-backports', 'r-cran-base64enc', 'r-cran-base64url', 'r-cran-batchjobs', 'r-cran-batchtools', 'r-cran-bayesfactor', 'r-cran-bayesplot', 'r-cran-bbmisc', 'r-cran-bbmle', 'r-cran-bdsmatrix', 'r-cran-beeswarm', 'r-cran-bench', 'r-cran-bh', 'r-cran-biasedurn', 'r-cran-biocmanager', 'r-cran-bit', 'r-cran-bit64', 'r-cran-bitops', 'r-cran-blme', 'r-cran-blob', 'r-cran-bookdown', 'r-cran-boot', 'r-cran-brew', 'r-cran-brglm2', 'r-cran-bridgesampling', 'r-cran-brio', 'r-cran-brms', 'r-cran-brobdingnag', 'r-cran-broom', 'r-cran-broom.helpers', 'r-cran-broom.mixed', 'r-cran-bslib', 'r-cran-ca', 'r-cran-cachem', 'r-cran-cairo', 'r-cran-callr', 'r-cran-car', 'r-cran-cardata', 'r-cran-caret', 'r-cran-catools', 'r-cran-cba', 'r-cran-cellranger', 'r-cran-checkmate', 'r-cran-chk', 'r-cran-chron', 'r-cran-class', 'r-cran-cli', 'r-cran-clipr', 'r-cran-clock', 'r-cran-clubsandwich', 'r-cran-cluster', 'r-cran-cmprsk', 'r-cran-coda', 'r-cran-codetools', 'r-cran-coin', 'r-cran-collapse', 'r-cran-colorspace', 'r-cran-colourpicker', 'r-cran-commonmark', 'r-cran-conflicted', 'r-cran-conquer', 'r-cran-contfrac', 'r-cran-corrplot', 'r-cran-covr', 'r-cran-cowplot', 'r-cran-cpp11', 'r-cran-crayon', 'r-cran-credentials', 'r-cran-crosstalk', 'r-cran-curl', 'r-cran-cvar', 'r-cran-cvst', 'r-cran-cyclocomp', 'r-cran-data.table', 'r-cran-datawizard', 'r-cran-date', 'r-cran-dbi', 'r-cran-dbitest', 'r-cran-dbplyr', 'r-cran-dbscan', 'r-cran-ddalpha', 'r-cran-decor', 'r-cran-deldir', 'r-cran-dendextend', 'r-cran-deoptimr', 'r-cran-deriv', 'r-cran-desc', 'r-cran-desolve', 'r-cran-devtools', 'r-cran-dfoptim', 'r-cran-diagram', 'r-cran-dials', 'r-cran-dicedesign', 'r-cran-dichromat', 'r-cran-diffobj', 'r-cran-digest', 'r-cran-dimred', 'r-cran-diptest', 'r-cran-distributional', 'r-cran-doby', 'r-cran-docopt', 'r-cran-domc', 'r-cran-doparallel', 'r-cran-dorng', 'r-cran-dotcall64', 'r-cran-downlit', 'r-cran-dplyr', 'r-cran-drr', 'r-cran-dt', 'r-cran-dtplyr', 'r-cran-dygraphs', 'r-cran-dynlm', 'r-cran-e1071', 'r-cran-eaf', 'r-cran-earth', 'r-cran-effects', 'r-cran-ellipse', 'r-cran-ellipsis', 'r-cran-elliptic', 'r-cran-emdbook', 'r-cran-emmeans', 'r-cran-emoa', 'r-cran-energy', 'r-cran-enrichwith', 'r-cran-epi', 'r-cran-estimability', 'r-cran-etm', 'r-cran-evaluate', 'r-cran-evd', 'r-cran-expint', 'r-cran-expm', 'r-cran-extradistr', 'r-cran-fansi', 'r-cran-farver', 'r-cran-fastica', 'r-cran-fastmap', 'r-cran-fastmatch', 'r-cran-fbasics', 'r-cran-fgarch', 'r-cran-fields', 'r-cran-filehash', 'r-cran-fit.models', 'r-cran-flexmix', 'r-cran-fnn', 'r-cran-fontawesome', 'r-cran-fontbitstreamvera', 'r-cran-fontliberation', 'r-cran-fontquiver', 'r-cran-forcats', 'r-cran-foreach', 'r-cran-forecast', 'r-cran-foreign', 'r-cran-formatr', 'r-cran-formattable', 'r-cran-formula', 'r-cran-fpc', 'r-cran-fracdiff', 'r-cran-fs', 'r-cran-furrr', 'r-cran-futile.logger', 'r-cran-futile.options', 'r-cran-future', 'r-cran-future.apply', 'r-cran-g.data', 'r-cran-gam', 'r-cran-gamm4', 'r-cran-gargle', 'r-cran-gbrd', 'r-cran-gbutils', 'r-cran-gclus', 'r-cran-gdata', 'r-cran-gee', 'r-cran-geepack', 'r-cran-generics', 'r-cran-geometry', 'r-cran-geosphere', 'r-cran-gert', 'r-cran-ggally', 'r-cran-gganimate', 'r-cran-ggbeeswarm', 'r-cran-ggeffects', 'r-cran-ggforce', 'r-cran-ggfortify', 'r-cran-ggplot2', 'r-cran-ggpubr', 'r-cran-ggrepel', 'r-cran-ggridges', 'r-cran-ggsci', 'r-cran-ggsignif', 'r-cran-ggstats', 'r-cran-gh', 'r-cran-git2r', 'r-cran-gitcreds', 'r-cran-glmnet', 'r-cran-globals', 'r-cran-glue', 'r-cran-gmm', 'r-cran-gmp', 'r-cran-googledrive', 'r-cran-googlesheets4', 'r-cran-gower', 'r-cran-gparotation', 'r-cran-gplots', 'r-cran-gridbase', 'r-cran-gridextra', 'r-cran-gridgraphics', 'r-cran-gridsvg', 'r-cran-gsl', 'r-cran-gss', 'r-cran-gtable', 'r-cran-gtools', 'r-cran-hardhat', 'r-cran-haven', 'r-cran-here', 'r-cran-hexbin', 'r-cran-highr', 'r-cran-hmisc', 'r-cran-hms', 'r-cran-hsaur3', 'r-cran-htmltable', 'r-cran-htmltools', 'r-cran-htmlwidgets', 'r-cran-httptest2', 'r-cran-httpuv', 'r-cran-httr', 'r-cran-httr2', 'r-cran-hunspell', 'r-cran-hypergeo', 'r-cran-ids', 'r-cran-igraph', 'r-cran-ini', 'r-cran-inline', 'r-cran-insight', 'r-cran-intergraph', 'r-cran-interp', 'r-cran-inum', 'r-cran-ipred', 'r-cran-irace', 'r-cran-irdisplay', 'r-cran-irlba', 'r-cran-isoband', 'r-cran-iterators', 'r-cran-itertools', 'r-cran-janeaustenr', 'r-cran-jomo', 'r-cran-jpeg', 'r-cran-jquerylib', 'r-cran-jsonlite', 'r-cran-kableextra', 'r-cran-kernlab', 'r-cran-kernsmooth', 'r-cran-kmi', 'r-cran-knitr', 'r-cran-ks', 'r-cran-labeling', 'r-cran-labelled', 'r-cran-lambda.r', 'r-cran-later', 'r-cran-lattice', 'r-cran-latticeextra', 'r-cran-lava', 'r-cran-lavaan', 'r-cran-lavasearch2', 'r-cran-lazyeval', 'r-cran-lbfgsb3c', 'r-cran-leaps', 'r-cran-lhs', 'r-cran-libcoin', 'r-cran-lifecycle', 'r-cran-linprog', 'r-cran-lintr', 'r-cran-listenv', 'r-cran-littler', 'r-cran-lme4', 'r-cran-lmertest', 'r-cran-lmtest', 'r-cran-lobstr', 'r-cran-locfit', 'r-cran-logcondens', 'r-cran-logspline', 'r-cran-loo', 'r-cran-lpsolve', 'r-cran-lsmeans', 'r-cran-lubridate', 'r-cran-magic', 'r-cran-magick', 'r-cran-magrittr', 'r-cran-mapdata', 'r-cran-mapproj', 'r-cran-maps', 'r-cran-marginaleffects', 'r-cran-markdown', 'r-cran-mass', 'r-cran-matchit', 'r-cran-mathjaxr', 'r-cran-matrix', 'r-cran-matrixmodels', 'r-cran-matrixstats', 'r-cran-maxlik', 'r-cran-mclogit', 'r-cran-mclust', 'r-cran-mda', 'r-cran-memisc', 'r-cran-memoise', 'r-cran-metadat', 'r-cran-metafor', 'r-cran-mets', 'r-cran-mgcv', 'r-cran-mice', 'r-cran-microbenchmark', 'r-cran-mime', 'r-cran-miniui', 'r-cran-minqa', 'r-cran-misctools', 'r-cran-mitml', 'r-cran-mitools', 'r-cran-mlbench', 'r-cran-mlmetrics', 'r-cran-mlmrev', 'r-cran-mlr', 'r-cran-mnormt', 'r-cran-mockery', 'r-cran-modeldata', 'r-cran-modelmetrics', 'r-cran-modelr', 'r-cran-modeltools', 'r-cran-msm', 'r-cran-multcomp', 'r-cran-multcompview', 'r-cran-multicool', 'r-cran-munsell', 'r-cran-mvtnorm', 'r-cran-nanoarrow', 'r-cran-ncdf4', 'r-cran-network', 'r-cran-nleqslv', 'r-cran-nlme', 'r-cran-nloptr', 'r-cran-nmf', 'r-cran-nnet', 'r-cran-nnls', 'r-cran-numderiv', 'r-cran-openssl', 'r-cran-openxlsx', 'r-cran-optimparallel', 'r-cran-optimx', 'r-cran-ordinal', 'r-cran-packrat', 'r-cran-palmerpenguins', 'r-cran-pammtools', 'r-cran-pan', 'r-cran-pander', 'r-cran-parallelly', 'r-cran-parallelmap', 'r-cran-paramhelpers', 'r-cran-party', 'r-cran-partykit', 'r-cran-patchwork', 'r-cran-patrick', 'r-cran-pbapply', 'r-cran-pbivnorm', 'r-cran-pbkrtest', 'r-cran-pbmcapply', 'r-cran-pcapp', 'r-cran-pdftools', 'r-cran-pec', 'r-cran-permute', 'r-cran-phangorn', 'r-cran-pillar', 'r-cran-pingr', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgdown', 'r-cran-pkgkitten', 'r-cran-pkgload', 'r-cran-pki', 'r-cran-plm', 'r-cran-plogr', 'r-cran-plotmo', 'r-cran-plotrix', 'r-cran-plumber', 'r-cran-plyr', 'r-cran-png', 'r-cran-polspline', 'r-cran-polyclip', 'r-cran-polycor', 'r-cran-polynom', 'r-cran-poorman', 'r-cran-popepi', 'r-cran-posterior', 'r-cran-prabclus', 'r-cran-pracma', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-proc', 'r-cran-processx', 'r-cran-prodlim', 'r-cran-profmem', 'r-cran-profvis', 'r-cran-progress', 'r-cran-progressr', 'r-cran-projpred', 'r-cran-promises', 'r-cran-proxy', 'r-cran-ps', 'r-cran-pscl', 'r-cran-psych', 'r-cran-psychtools', 'r-cran-publish', 'r-cran-purrr', 'r-cran-purrrlyr', 'r-cran-pvclust', 'r-cran-qap', 'r-cran-qpdf', 'r-cran-qtl', 'r-cran-quadprog', 'r-cran-quantmod', 'r-cran-quantreg', 'r-cran-quickjsr', 'r-cran-r.cache', 'r-cran-r.devices', 'r-cran-r.methodss3', 'r-cran-r.oo', 'r-cran-r.rsp', 'r-cran-r.utils', 'r-cran-r6', 'r-cran-ragg', 'r-cran-randomforest', 'r-cran-ranger', 'r-cran-rann', 'r-cran-rappdirs', 'r-cran-raster', 'r-cran-rbibutils', 'r-cran-rcmdcheck', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rcpparmadillo', 'r-cran-rcppeigen', 'r-cran-rcppml', 'r-cran-rcppparallel', 'r-cran-rcppprogress', 'r-cran-rcpproll', 'r-cran-rcpptoml', 'r-cran-rcsdp', 'r-cran-rcurl', 'r-cran-rdpack', 'r-cran-readr', 'r-cran-readxl', 'r-cran-recipes', 'r-cran-registry', 'r-cran-relsurv', 'r-cran-rematch', 'r-cran-rematch2', 'r-cran-remotes', 'r-cran-renv', 'r-cran-repr', 'r-cran-reprex', 'r-cran-reshape', 'r-cran-reshape2', 'r-cran-reticulate', 'r-cran-rex', 'r-cran-rgl', 'r-cran-rhpcblasctl', 'r-cran-rio', 'r-cran-riskregression', 'r-cran-rlang', 'r-cran-rmarkdown', 'r-cran-rmpfr', 'r-cran-rmpi', 'r-cran-rms', 'r-cran-rmysql', 'r-cran-rngtools', 'r-cran-robumeta', 'r-cran-robust', 'r-cran-robustbase', 'r-cran-rocr', 'r-cran-rose', 'r-cran-roxygen2', 'r-cran-rpart', 'r-cran-rpostgresql', 'r-cran-rprojroot', 'r-cran-rrcov', 'r-cran-rsample', 'r-cran-rsconnect', 'r-cran-rsolnp', 'r-cran-rspectra', 'r-cran-rsqlite', 'r-cran-rstan', 'r-cran-rstanarm', 'r-cran-rstantools', 'r-cran-rstatix', 'r-cran-rstudioapi', 'r-cran-rsvg', 'r-cran-rtdists', 'r-cran-rtsne', 'r-cran-runit', 'r-cran-rversions', 'r-cran-rvest', 'r-cran-rwiener', 'r-cran-sandwich', 'r-cran-sass', 'r-cran-scales', 'r-cran-scatterplot3d', 'r-cran-selectr', 'r-cran-sendmailr', 'r-cran-seriation', 'r-cran-sessioninfo', 'r-cran-setrng', 'r-cran-sfsmisc', 'r-cran-shape', 'r-cran-shiny', 'r-cran-shinyjs', 'r-cran-shinystan', 'r-cran-shinythemes', 'r-cran-sjlabelled', 'r-cran-slider', 'r-cran-sm', 'r-cran-smcfcs', 'r-cran-sna', 'r-cran-snakecase', 'r-cran-sodium', 'r-cran-sourcetools', 'r-cran-sp', 'r-cran-spam', 'r-cran-sparsem', 'r-cran-spatial', 'r-cran-spelling', 'r-cran-splines2', 'r-cran-squarem', 'r-cran-stabledist', 'r-cran-stanheaders', 'r-cran-statmod', 'r-cran-statnet.common', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-strucchange', 'r-cran-survey', 'r-cran-survival', 'r-cran-svglite', 'r-cran-swagger', 'r-cran-sys', 'r-cran-systemfit', 'r-cran-systemfonts', 'r-cran-tensora', 'r-cran-terra', 'r-cran-testit', 'r-cran-testthat', 'r-cran-textshaping', 'r-cran-th.data', 'r-cran-thematic', 'r-cran-themis', 'r-cran-threejs', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-tidyverse', 'r-cran-tikzdevice', 'r-cran-timechange', 'r-cran-timedate', 'r-cran-timereg', 'r-cran-timeseries', 'r-cran-tinytest', 'r-cran-tinytex', 'r-cran-truncdist', 'r-cran-truncnorm', 'r-cran-tseries', 'r-cran-tsp', 'r-cran-ttr', 'r-cran-tufte', 'r-cran-tweenr', 'r-cran-tzdb', 'r-cran-ucminf', 'r-cran-unitizer', 'r-cran-urca', 'r-cran-urlchecker', 'r-cran-uroot', 'r-cran-usethis', 'r-cran-utf8', 'r-cran-uuid', 'r-cran-v8', 'r-cran-vcd', 'r-cran-vctrs', 'r-cran-vdiffr', 'r-cran-vegan', 'r-cran-venndiagram', 'r-cran-vgam', 'r-cran-vioplot', 'r-cran-vipor', 'r-cran-viridis', 'r-cran-viridislite', 'r-cran-vroom', 'r-cran-waldo', 'r-cran-warp', 'r-cran-webfakes', 'r-cran-webshot', 'r-cran-webutils', 'r-cran-whisker', 'r-cran-whoami', 'r-cran-withr', 'r-cran-writexl', 'r-cran-xfun', 'r-cran-xml', 'r-cran-xml2', 'r-cran-xmlparsedata', 'r-cran-xopen', 'r-cran-xtable', 'r-cran-xts', 'r-cran-yaml', 'r-cran-zeallot', 'r-cran-zip', 'r-cran-zoo', 'r-doc-html', 'r-other-mott-happy.hbrem', 'r-recommended', 'rake', 'raster3d', 'raxml', 'readline-common', 'readseq', 'rnahybrid', 'rpcsvc-proto', 'rtax', 'ruby', 'ruby-net-telnet', 'ruby-rubygems', 'ruby-sdbm:amd64', 'ruby-webrick', 'ruby-xmlrpc', 'ruby3.1', 'rubygems-integration', 'samtools', 'sensible-utils', 'seqan-apps', 'sgml-base', 'shared-mime-info', 'sibsim4', 'sigma-align', 'sim4', 'smalt', 'snap', 'soapdenovo', 'soapdenovo2', 'squizz', 'sra-toolkit', 'ssake', 'sse4.2-support', 'staden-io-lib-utils', 'sysstat', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 't-coffee', 't1utils', 'tabix', 'tasksel', 'tasksel-data', 'tcl', 'tcl8.6', 'tex-common', 'texlive-base', 'texlive-bibtex-extra', 'texlive-binaries', 'texlive-latex-base', 'theseus', 'tigr-glimmer', 'tk8.6-blt2.5', 'tm-align', 'tree-puzzle', 'tree-puzzle-doc', 'ttf-bitstream-vera', 'ucf', 'unicode-data', 'unixodbc-common', 'unzip', 'va-driver-all:amd64', 'vcftools', 'vdpau-driver-all:amd64', 'velvet', 'w3c-sgml-lib', 'wise', 'wise-data', 'x11-common', 'x11-utils', 'x11-xserver-utils', 'xauth', 'xdg-user-dirs', 'xdg-utils', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xml-core', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'zutty', 'med-cloud'] 14m14.5s INFO: Running scripts post_remove 14m14.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_remove_exceptions'] 14m14.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_remove_exceptions'] 14m14.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg', '--purge', 'abyss', 'adduser', 'adwaita-icon-theme', 'aevol', 'alien-hunter', 'alsa-topology-conf', 'alsa-ucm-conf', 'altree', 'amap-align', 'apache2-bin', 'aragorn', 'arden', 'at-spi2-common', 'at-spi2-core', 'autodock', 'autodock-vina', 'autogrid', 'bamtools', 'bc', 'bcalm', 'bcftools', 'bedtools', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bioperl', 'bioperl-run', 'biosquid', 'blends-common', 'blt', 'bowtie', 'bowtie2', 'boxshade', 'bsdextrautils', 'build-essential', 'bwa', 'bzip2', 'bzip2-doc', 'ca-certificates', 'ca-certificates-java', 'cassiopee', 'cd-hit', 'cdbfasta', 'circos', 'circos-tools', 'clearcut', 'clonalframe', 'clustalo', 'clustalw', 'concavity', 'conservation-code', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'datamash', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jdk-headless', 'default-jre', 'default-jre-headless', 'dialign', 'dialign-tx', 'dialign-tx-data', 'dictionaries-common', 'dirmngr', 'discosnp', 'disulfinder', 'disulfinder-data', 'dmidecode', 'dmsetup', 'dnaclust', 'docutils-common', 'dpkg-dev', 'dssp', 'dvisvgm', 'emacsen-common', 'embassy-domainatrix', 'embassy-domalign', 'embassy-domsearch', 'emboss', 'emboss-data', 'emboss-lib', 'exonerate', 'fakeroot', 'fastdnaml', 'fastlink', 'fastqc', 'fasttree', 'file', 'fitgcp', 'flexbar', 'fontconfig', 'fontconfig-config', 'fonts-circos-symbols', 'fonts-cmu', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-droid-fallback', 'fonts-font-awesome', 'fonts-glyphicons-halflings', 'fonts-lato', 'fonts-liberation', 'fonts-liberation-sans-narrow', 'fonts-lmodern', 'fonts-lyx', 'fonts-mathjax', 'fonts-noto-mono', 'fonts-urw-base35', 'freecontact', 'fsa', 'g++', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gasic', 'gatb-core', 'gawk', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'gdal-data', 'gdal-plugins:amd64', 'genometools', 'genometools-common', 'gff2aplot', 'gff2ps', 'gfortran', 'gfortran-14', 'gfortran-14-x86-64-linux-gnu', 'gfortran-x86-64-linux-gnu', 'ghostscript', 'glam2', 'gmap', 'gnupg', 'gnupg-l10n', 'gnupg-utils', 'gpg', 'gpg-agent', 'gpg-wks-client', 'gpgconf', 'gpgsm', 'graphicsmagick', 'graphviz', 'grinder', 'gromacs', 'gromacs-data', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hhsuite', 'hhsuite-data', 'hicolor-icon-theme', 'hisat2', 'hmmer', 'hunspell-en-gb', 'hunspell-en-us', 'i965-va-driver:amd64', 'ibverbs-providers:amd64', 'icu-devtools', 'idba', 'imagemagick', 'imagemagick-6-common', 'imagemagick-6.q16', 'infernal', 'intel-media-va-driver:amd64', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'java-wrappers', 'javascript-common', 'jellyfish', 'kalign', 'kissplice', 'krb5-locales', 'lagan', 'laptop-detect', 'last-align', 'lib32gcc-s1', 'lib32stdc++6', 'libaacs0:amd64', 'libabsl20230802:amd64', 'libace-perl', 'libaec0:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl:amd64', 'libalgorithm-merge-perl', 'libalgorithm-munkres-perl', 'libamd-comgr2:amd64', 'libamd3:amd64', 'libamdhip64-5', 'libann0', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache-pom-java', 'libapache2-mod-perl2', 'libapache2-reload-perl', 'libapparmor1:amd64', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libargtable2-0', 'libarmadillo14', 'libarpack2t64:amd64', 'libarray-compare-perl', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libass9:amd64', 'libassuan9:amd64', 'libasyncns0:amd64', 'libatinject-jsr330-api-java', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libauthen-sasl-perl', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavcodec61:amd64', 'libavfilter10:amd64', 'libavformat61:amd64', 'libavif16:amd64', 'libavutil59:amd64', 'libb-hooks-endofscope-perl', 'libb-hooks-op-check-perl:amd64', 'libbambamc0:amd64', 'libbamtools2.5.2:amd64', 'libbarclay-java', 'libbdplus0:amd64', 'libbibtex-parser-perl', 'libbinutils:amd64', 'libbio-asn1-entrezgene-perl', 'libbio-cluster-perl', 'libbio-eutilities-perl', 'libbio-featureio-perl', 'libbio-perl-perl', 'libbio-perl-run-perl', 'libbio-tools-run-remoteblast-perl', 'libbio-variation-perl', 'libbiojava-java', 'libbiojava1.9-java', 'libbit-vector-perl:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libbluray2:amd64', 'libboost-dev:amd64', 'libboost-filesystem1.83.0:amd64', 'libboost-mpi1.83.0', 'libboost-program-options1.83.0:amd64', 'libboost-serialization1.83.0:amd64', 'libboost-thread1.83.0:amd64', 'libboost1.83-dev:amd64', 'libbrotli1:amd64', 'libbs2b0:amd64', 'libbsd-resource-perl', 'libbytecode-java', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libc6-i386', 'libcache-cache-perl', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcapture-tiny-perl', 'libcares2:amd64', 'libcarp-always-perl', 'libcarp-clan-perl', 'libcassie1v5', 'libcbor0.10:amd64', 'libcc1-0:amd64', 'libcdt5:amd64', 'libcfitsio10t64:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcgraph6:amd64', 'libchromaprint1:amd64', 'libcifpp-data', 'libcifpp5:amd64', 'libcjson1:amd64', 'libclang-common-18-dev:amd64', 'libclang-cpp18', 'libclang-rt-18-dev:amd64', 'libclass-data-inheritable-perl', 'libclass-inspector-perl', 'libclass-method-modifiers-perl', 'libclass-xsaccessor-perl', 'libclc-18', 'libclc-18-dev', 'libclone-perl:amd64', 'libcloudproviders0:amd64', 'libcodec2-1.2:amd64', 'libcolamd3:amd64', 'libcolord2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-collections3-java', 'libcommons-compress-java', 'libcommons-dbcp-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libcommons-pool-java', 'libconfig-general-perl', 'libconvert-binary-c-perl', 'libconvert-binhex-perl', 'libcppunit-1.15-0:amd64', 'libcrypt-dev:amd64', 'libcrypt-rc4-perl', 'libcryptsetup12:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdata-dump-perl', 'libdata-dumper-simple-perl', 'libdata-stag-perl', 'libdate-calc-perl', 'libdate-calc-xs-perl:amd64', 'libdate-manip-perl', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbd-mysql-perl:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate-dev:amd64', 'libdeflate0:amd64', 'libdevel-callchecker-perl:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libdevmapper1.02.1:amd64', 'libdigest-perl-md5-perl', 'libdivsufsort3:amd64', 'libdjvulibre-text', 'libdjvulibre21:amd64', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdvdnav4:amd64', 'libdvdread8t64:amd64', 'libdynaloader-functions-perl', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1t64:amd64', 'libencode-locale-perl', 'libencode-perl:amd64', 'libepoxy0:amd64', 'liberror-perl', 'liberror-prone-java', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfabric1:amd64', 'libfakeroot:amd64', 'libfcgi-bin', 'libfcgi-perl', 'libfcgi0t64:amd64', 'libfftw3-double3:amd64', 'libfftw3-single3:amd64', 'libfido2-1:amd64', 'libfile-basedir-perl', 'libfile-desktopentry-perl', 'libfile-fcntllock-perl', 'libfile-listing-perl', 'libfile-mimeinfo-perl', 'libfile-slurp-tiny-perl', 'libfile-sort-perl', 'libfindbin-libs-perl', 'libflac12t64:amd64', 'libflite1:amd64', 'libfont-afm-perl', 'libfont-ttf-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreecontact0t64:amd64', 'libfreemarker-java', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfreezethaw-perl', 'libfribidi0:amd64', 'libfyba0t64:amd64', 'libg20', 'libgatbcore3:amd64', 'libgatk-native-bindings-java', 'libgav1-1:amd64', 'libgbm1:amd64', 'libgcc-14-dev:amd64', 'libgclib3:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdal35:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-bin', 'libgdk-pixbuf2.0-common', 'libgeos-c1t64:amd64', 'libgeos3.13.0:amd64', 'libgeotiff5:amd64', 'libgetopt-euclid-perl', 'libgetopt-simple-perl', 'libgflags2.2', 'libgfortran-14-dev:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgit2-1.7:amd64', 'libgkl-java', 'libgkl-jni', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libgles2:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglpk40:amd64', 'libglu1-mesa:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgme0:amd64', 'libgomp1:amd64', 'libgoogle-glog0v6t64', 'libgoogle-gson-java', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraph-perl', 'libgraphics-colornames-perl', 'libgraphics-colorobject-perl', 'libgraphicsmagick-q16-3t64', 'libgraphite2-3:amd64', 'libgraphviz-perl', 'libgromacs9:amd64', 'libgs-common', 'libgs10:amd64', 'libgs10-common', 'libgsl28:amd64', 'libgslcblas0:amd64', 'libgsm1:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgts-0.7-5t64:amd64', 'libgts-bin', 'libguava-java', 'libgumbo2:amd64', 'libgvc6', 'libgvpr2:amd64', 'libharfbuzz0b:amd64', 'libhdf4-0-alt:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libheap-perl', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhmsbeagle1v5:amd64', 'libhpdf-2.3.0:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhtml-form-perl', 'libhtml-format-perl', 'libhtml-parser-perl:amd64', 'libhtml-tableextract-perl', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhtsjdk-java', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libhttp-parser2.9:amd64', 'libhttpclient-java', 'libhttpcore-java', 'libhunspell-1.7-0:amd64', 'libhwasan0:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libhwy1t64:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'libice6:amd64', 'libicu-dev:amd64', 'libicu72:amd64', 'libidn12:amd64', 'libigdgmm12:amd64', 'libijs-0.35:amd64', 'libimagequant0:amd64', 'libimath-3-1-29t64:amd64', 'libimport-into-perl', 'libio-all-perl', 'libio-compress-brotli-perl', 'libio-html-perl', 'libio-pty-perl', 'libio-sessiondata-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libio-stringy-perl', 'libipc-run-perl', 'libipc-sharelite-perl', 'libipc-system-simple-perl', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjbig2dec0:amd64', 'libjbzip2-java', 'libjcode-pm-perl', 'libjellyfish-2.0-2:amd64', 'libjgraph-java', 'libjgrapht0.8-java', 'libjoptsimple-java', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-bootstrap', 'libjs-bootstrap4', 'libjs-bootswatch', 'libjs-d3', 'libjs-es5-shim', 'libjs-highlight.js', 'libjs-jquery', 'libjs-jquery-datatables', 'libjs-jquery-datatables-extensions', 'libjs-jquery-selectize.js', 'libjs-jquery-ui', 'libjs-json', 'libjs-lunr', 'libjs-mathjax', 'libjs-microplugin.js', 'libjs-modernizr', 'libjs-popper.js', 'libjs-prettify', 'libjs-remark-slide', 'libjs-sifter.js', 'libjs-sizzle', 'libjs-twitter-bootstrap-datepicker', 'libjs-underscore', 'libjson-c5:amd64', 'libjsoncpp25:amd64', 'libjsr305-java', 'libjxl0.9:amd64', 'libjxr-tools', 'libjxr0t64:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1t64:amd64', 'libkmldom1t64:amd64', 'libkmlengine1t64:amd64', 'libkmod2:amd64', 'libkpathsea6:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libksba8:amd64', 'liblab-gamut1:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'liblatex-tounicode-perl', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblightcouch-java', 'liblilv-0-0:amd64', 'liblist-allutils-perl', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'liblist-someutils-perl', 'liblist-someutils-xs-perl:amd64', 'liblist-utilsby-perl', 'libllvm17t64:amd64', 'libllvm18:amd64', 'libllvmspirvlib18.1:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblog4j2-java', 'liblqr-1-0:amd64', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.1-0:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'liblzma-dev:amd64', 'libmagic-mgc', 'libmagic1t64:amd64', 'libmagick++-6.q16-9t64:amd64', 'libmagickcore-6.q16-7-extra:amd64', 'libmagickcore-6.q16-7t64:amd64', 'libmagickwand-6.q16-7t64:amd64', 'libmailtools-perl', 'libmariadb3:amd64', 'libmath-bezier-perl', 'libmath-derivative-perl', 'libmath-random-mt-perl', 'libmath-round-perl', 'libmath-spline-perl', 'libmath-tamuanova-perl', 'libmath-vec-perl', 'libmath-vecstat-perl', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmime-tools-perl', 'libminizip1t64:amd64', 'libmjson-java', 'libmldbm-perl', 'libmodule-implementation-perl', 'libmodule-runtime-perl', 'libmongodb-java', 'libmoo-perl', 'libmp3lame0:amd64', 'libmpc3:amd64', 'libmpfi0:amd64', 'libmpfr6:amd64', 'libmpg123-0t64:amd64', 'libmujs3:amd64', 'libmunge2:amd64', 'libmuparser2v5:amd64', 'libmysofa1:amd64', 'libnamespace-clean-perl', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncbi-wvdb3:amd64', 'libncbi6t64:amd64', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnet-dbus-perl', 'libnet-http-perl', 'libnet-smtp-ssl-perl', 'libnet-ssleay-perl:amd64', 'libnetcdf19t64:amd64', 'libnetpbm11t64:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnlopt0:amd64', 'libnode115:amd64', 'libnorm1t64:amd64', 'libnpth0t64:amd64', 'libnsl2:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libnumber-format-perl', 'libodbc2:amd64', 'libodbcinst2:amd64', 'libogdi4.1:amd64', 'libogg0:amd64', 'libole-storage-lite-perl', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libopenexr-3-1-30:amd64', 'libopengl0:amd64', 'libopenjp2-7:amd64', 'libopenmpi3t64:amd64', 'libopenmpt0t64:amd64', 'libopus0:amd64', 'libpackage-stash-perl', 'libpackage-stash-xs-perl:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libparams-classify-perl:amd64', 'libparams-validate-perl:amd64', 'libparse-recdescent-perl', 'libpathplan4:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpcre2-32-0:amd64', 'libpcre2-dev:amd64', 'libpcre2-posix3:amd64', 'libpcsclite1:amd64', 'libperl4-corelibs-perl', 'libperl5.38t64:amd64', 'libpgm-5.3-0t64:amd64', 'libpicard-java', 'libpixman-1-0:amd64', 'libpkgconf3:amd64', 'libplacebo349:amd64', 'libpmix2t64:amd64', 'libpng-dev:amd64', 'libpng-tools', 'libpng16-16t64:amd64', 'libpocketsphinx3:amd64', 'libpod-coverage-perl', 'libpod-parser-perl', 'libpoppler-cpp1:amd64', 'libpoppler140:amd64', 'libpostproc58:amd64', 'libpostscript-perl', 'libpotrace0:amd64', 'libpq5:amd64', 'libproc2-0:amd64', 'libproj25:amd64', 'libpsl5t64:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptexenc1:amd64', 'libpulse0:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqhull-r8.0:amd64', 'libqpdf29t64:amd64', 'libquadmath0:amd64', 'librabbitmq4:amd64', 'libraqm0:amd64', 'librav1e0.7:amd64', 'libraw23t64:amd64', 'librdmacm1t64:amd64', 'libre2-11:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'libreadonly-perl', 'libref-util-perl', 'libref-util-xs-perl', 'libregexp-common-perl', 'librhino-java', 'librist4:amd64', 'librole-tiny-perl', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'librtmp1:amd64', 'librttopo1:amd64', 'librubberband2:amd64', 'libruby:amd64', 'libruby3.1t64:amd64', 'libsamplerate0:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libserd-0-0:amd64', 'libset-intspan-perl', 'libset-object-perl', 'libset-scalar-perl', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libshine3:amd64', 'libsigsegv2:amd64', 'libslf4j-java', 'libsm6:amd64', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsndfile1:amd64', 'libsoap-lite-perl', 'libsodium23:amd64', 'libsord-0-0:amd64', 'libsort-naturally-perl', 'libsoxr0:amd64', 'libspatialite8t64:amd64', 'libspeex1:amd64', 'libsphinxbase3t64:amd64', 'libspiffy-perl', 'libspreadsheet-parseexcel-perl', 'libspreadsheet-writeexcel-perl', 'libsprng2', 'libsqlite3-0:amd64', 'libsquid1t64:amd64', 'libsquizz', 'libsratom-0-0:amd64', 'libsrt1.5-gnutls:amd64', 'libssh-4:amd64', 'libssh2-1t64:amd64', 'libstaden-read14t64:amd64', 'libstatistics-basic-perl', 'libstatistics-descriptive-perl', 'libstdc++-14-dev:amd64', 'libsub-exporter-progressive-perl', 'libsub-identify-perl', 'libsub-name-perl:amd64', 'libsub-quote-perl', 'libsub-uplevel-perl', 'libsuitesparseconfig7:amd64', 'libsuperlu6:amd64', 'libsvg-graph-perl', 'libsvg-perl', 'libsvtav1enc2:amd64', 'libswresample5:amd64', 'libswscale8:amd64', 'libsynctex2:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libtamuanova-0.2', 'libtask-weaken-perl', 'libtbb-dev:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libteckit0:amd64', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-pod-perl', 'libtest-requiresinternet-perl', 'libtest-warn-perl', 'libtexlua53-5:amd64', 'libtext-csv-perl', 'libtext-csv-xs-perl:amd64', 'libtext-diff-perl', 'libtext-format-perl', 'libtext-iconv-perl:amd64', 'libthai-data', 'libthai0:amd64', 'libtheora0:amd64', 'libtie-ixhash-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtre5:amd64', 'libtree-dagnode-perl', 'libtry-tiny-perl', 'libtsan2:amd64', 'libtwolame0:amd64', 'libtype-tiny-perl', 'libtype-tiny-xs-perl:amd64', 'libubsan1:amd64', 'libucx0:amd64', 'libudfread0:amd64', 'libunibreak6:amd64', 'libunicode-map-perl', 'libunwind8:amd64', 'liburi-perl', 'liburiparser1:amd64', 'libuv1t64:amd64', 'libva-drm2:amd64', 'libva-x11-2:amd64', 'libva2:amd64', 'libvariable-magic-perl', 'libvdpau-va-gl1:amd64', 'libvdpau1:amd64', 'libvidstab1.1:amd64', 'libvorbis0a:amd64', 'libvorbisenc2:amd64', 'libvorbisfile3:amd64', 'libvpl2', 'libvpx9:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwmflite-0.2-7:amd64', 'libwoff1:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx11-protocol-perl', 'libx11-xcb1:amd64', 'libx264-164:amd64', 'libx265-209:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces-c3.2t64:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-dom-perl', 'libxml-dom-xpath-perl', 'libxml-filter-buffertext-perl', 'libxml-libxml-perl', 'libxml-libxslt-perl:amd64', 'libxml-namespacesupport-perl', 'libxml-parser-perl', 'libxml-perl', 'libxml-regexp-perl', 'libxml-sax-base-perl', 'libxml-sax-expat-perl', 'libxml-sax-perl', 'libxml-sax-writer-perl', 'libxml-simple-perl', 'libxml-twig-perl', 'libxml-writer-perl', 'libxml-xpath-perl', 'libxml-xpathengine-perl', 'libxml2:amd64', 'libxmlrpc-lite-perl', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxnvctrl0:amd64', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxstring-perl:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxvidcore4:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyaml-libyaml-perl', 'libyaml-perl', 'libyuv0:amd64', 'libz3-4:amd64', 'libzimg2:amd64', 'libzix-0-0:amd64', 'libzmq5:amd64', 'libzvbi-common', 'libzvbi0t64:amd64', 'libzzip-0-13t64:amd64', 'linux-libc-dev', 'linux-sysctl-defaults', 'littler', 'lmodern', 'loki', 'lua-filesystem:amd64', 'lua-lpeg:amd64', 'lua-md5:amd64', 'luit', 'lynx', 'lynx-common', 'macs', 'mafft', 'mailcap', 'make', 'manpages', 'manpages-dev', 'mapsembler2', 'maq', 'mariadb-common', 'med-config', 'med-tasks', 'media-types', 'melting', 'menu', 'mesa-libgallium:amd64', 'mesa-opencl-icd:amd64', 'mesa-va-drivers:amd64', 'mesa-vdpau-drivers:amd64', 'mesa-vulkan-drivers:amd64', 'minia', 'mipe', 'mira-assembler', 'mira-rfam-12s-rrna', 'mlv-smile', 'mothur', 'mpi-default-bin', 'mrbayes', 'mummer', 'mupdf-tools', 'muscle', 'mustang', 'mysql-common', 'ncbi-blast+', 'ncbi-blast+-legacy', 'ncbi-data', 'ncbi-epcr', 'ncbi-tools-bin', 'ncbi-vdb-data', 'ncoils', 'neobio', 'netbase', 'netpbm', 'node-acorn', 'node-balanced-match', 'node-bootstrap-sass', 'node-brace-expansion', 'node-cjs-module-lexer', 'node-highlight.js', 'node-html5shiv', 'node-jquery', 'node-jquery-ui', 'node-minimatch', 'node-normalize.css', 'node-undici', 'node-xtend', 'nodejs', 'nodejs-doc', 'ocl-icd-libopencl1:amd64', 'openjdk-21-jdk-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssl', 'pal2nal', 'paml', 'pandoc', 'pandoc-data', 'paraclu', 'parallel', 'parsinsert', 'patch', 'pdb2pqr', 'perl', 'perl-doc', 'perl-modules-5.38', 'perl-openssl-defaults:amd64', 'perl-tk', 'perm', 'phylip', 'phyml', 'phyutility', 'picard-tools', 'pinentry-curses', 'pkgconf:amd64', 'pkgconf-bin', 'plink', 'plink1.9', 'plink2', 'poa', 'pocketsphinx-en-us', 'poppler-data', 'prank', 'prime-phylo', 'primer3', 'probabel', 'probalign', 'probcons', 'procps', 'proda', 'prodigal', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python-babel-localedata', 'python-biopython-doc', 'python-matplotlib-data', 'python3', 'python3-appdirs', 'python3-argcomplete', 'python3-argh', 'python3-attr', 'python3-autocommand', 'python3-babel', 'python3-biomaj3-cli', 'python3-biomaj3-core', 'python3-biopython', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-cykhash', 'python3-dateutil', 'python3-decorator', 'python3-docutils', 'python3-elasticsearch', 'python3-fonttools', 'python3-freetype', 'python3-fs', 'python3-gffutils', 'python3-hisat2', 'python3-hmmlearn', 'python3-html5lib', 'python3-htseq', 'python3-idna', 'python3-importlib-metadata', 'python3-inflect', 'python3-iniconfig', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jinja2', 'python3-joblib', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-numpy', 'python3-olefile', 'python3-packaging', 'python3-pdb2pqr', 'python3-pdbx', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-pluggy', 'python3-propka', 'python3-psutil', 'python3-pybedtools', 'python3-pyfaidx', 'python3-pygments', 'python3-pyparsing', 'python3-pysam', 'python3-pytest', 'python3-reportlab', 'python3-requests', 'python3-rlpycairo', 'python3-roman', 'python3-rpy2', 'python3-scipy', 'python3-simplejson', 'python3-six', 'python3-sklearn', 'python3-sklearn-lib:amd64', 'python3-soupsieve', 'python3-sympy', 'python3-threadpoolctl', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-tzlocal', 'python3-ufolib2', 'python3-unicodedata2', 'python3-urllib3', 'python3-webencodings', 'python3-zipp', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'r-base-core', 'r-base-dev', 'r-bioc-biobase', 'r-bioc-biocgenerics', 'r-bioc-biocstyle', 'r-bioc-biocversion', 'r-bioc-edger', 'r-bioc-graph', 'r-bioc-hilbertvis', 'r-bioc-limma', 'r-cran-abind', 'r-cran-acepack', 'r-cran-actuar', 'r-cran-admisc', 'r-cran-aer', 'r-cran-afex', 'r-cran-amelia', 'r-cran-ape', 'r-cran-arm', 'r-cran-askpass', 'r-cran-av', 'r-cran-backports', 'r-cran-base64enc', 'r-cran-base64url', 'r-cran-batchjobs', 'r-cran-batchtools', 'r-cran-bayesfactor', 'r-cran-bayesplot', 'r-cran-bbmisc', 'r-cran-bbmle', 'r-cran-bdsmatrix', 'r-cran-beeswarm', 'r-cran-bench', 'r-cran-bh', 'r-cran-biasedurn', 'r-cran-biocmanager', 'r-cran-bit', 'r-cran-bit64', 'r-cran-bitops', 'r-cran-blme', 'r-cran-blob', 'r-cran-bookdown', 'r-cran-boot', 'r-cran-brew', 'r-cran-brglm2', 'r-cran-bridgesampling', 'r-cran-brio', 'r-cran-brms', 'r-cran-brobdingnag', 'r-cran-broom', 'r-cran-broom.helpers', 'r-cran-broom.mixed', 'r-cran-bslib', 'r-cran-ca', 'r-cran-cachem', 'r-cran-cairo', 'r-cran-callr', 'r-cran-car', 'r-cran-cardata', 'r-cran-caret', 'r-cran-catools', 'r-cran-cba', 'r-cran-cellranger', 'r-cran-checkmate', 'r-cran-chk', 'r-cran-chron', 'r-cran-class', 'r-cran-cli', 'r-cran-clipr', 'r-cran-clock', 'r-cran-clubsandwich', 'r-cran-cluster', 'r-cran-cmprsk', 'r-cran-coda', 'r-cran-codetools', 'r-cran-coin', 'r-cran-collapse', 'r-cran-colorspace', 'r-cran-colourpicker', 'r-cran-commonmark', 'r-cran-conflicted', 'r-cran-conquer', 'r-cran-contfrac', 'r-cran-corrplot', 'r-cran-covr', 'r-cran-cowplot', 'r-cran-cpp11', 'r-cran-crayon', 'r-cran-credentials', 'r-cran-crosstalk', 'r-cran-curl', 'r-cran-cvar', 'r-cran-cvst', 'r-cran-cyclocomp', 'r-cran-data.table', 'r-cran-datawizard', 'r-cran-date', 'r-cran-dbi', 'r-cran-dbitest', 'r-cran-dbplyr', 'r-cran-dbscan', 'r-cran-ddalpha', 'r-cran-decor', 'r-cran-deldir', 'r-cran-dendextend', 'r-cran-deoptimr', 'r-cran-deriv', 'r-cran-desc', 'r-cran-desolve', 'r-cran-devtools', 'r-cran-dfoptim', 'r-cran-diagram', 'r-cran-dials', 'r-cran-dicedesign', 'r-cran-dichromat', 'r-cran-diffobj', 'r-cran-digest', 'r-cran-dimred', 'r-cran-diptest', 'r-cran-distributional', 'r-cran-doby', 'r-cran-docopt', 'r-cran-domc', 'r-cran-doparallel', 'r-cran-dorng', 'r-cran-dotcall64', 'r-cran-downlit', 'r-cran-dplyr', 'r-cran-drr', 'r-cran-dt', 'r-cran-dtplyr', 'r-cran-dygraphs', 'r-cran-dynlm', 'r-cran-e1071', 'r-cran-eaf', 'r-cran-earth', 'r-cran-effects', 'r-cran-ellipse', 'r-cran-ellipsis', 'r-cran-elliptic', 'r-cran-emdbook', 'r-cran-emmeans', 'r-cran-emoa', 'r-cran-energy', 'r-cran-enrichwith', 'r-cran-epi', 'r-cran-estimability', 'r-cran-etm', 'r-cran-evaluate', 'r-cran-evd', 'r-cran-expint', 'r-cran-expm', 'r-cran-extradistr', 'r-cran-fansi', 'r-cran-farver', 'r-cran-fastica', 'r-cran-fastmap', 'r-cran-fastmatch', 'r-cran-fbasics', 'r-cran-fgarch', 'r-cran-fields', 'r-cran-filehash', 'r-cran-fit.models', 'r-cran-flexmix', 'r-cran-fnn', 'r-cran-fontawesome', 'r-cran-fontbitstreamvera', 'r-cran-fontliberation', 'r-cran-fontquiver', 'r-cran-forcats', 'r-cran-foreach', 'r-cran-forecast', 'r-cran-foreign', 'r-cran-formatr', 'r-cran-formattable', 'r-cran-formula', 'r-cran-fpc', 'r-cran-fracdiff', 'r-cran-fs', 'r-cran-furrr', 'r-cran-futile.logger', 'r-cran-futile.options', 'r-cran-future', 'r-cran-future.apply', 'r-cran-g.data', 'r-cran-gam', 'r-cran-gamm4', 'r-cran-gargle', 'r-cran-gbrd', 'r-cran-gbutils', 'r-cran-gclus', 'r-cran-gdata', 'r-cran-gee', 'r-cran-geepack', 'r-cran-generics', 'r-cran-geometry', 'r-cran-geosphere', 'r-cran-gert', 'r-cran-ggally', 'r-cran-gganimate', 'r-cran-ggbeeswarm', 'r-cran-ggeffects', 'r-cran-ggforce', 'r-cran-ggfortify', 'r-cran-ggplot2', 'r-cran-ggpubr', 'r-cran-ggrepel', 'r-cran-ggridges', 'r-cran-ggsci', 'r-cran-ggsignif', 'r-cran-ggstats', 'r-cran-gh', 'r-cran-git2r', 'r-cran-gitcreds', 'r-cran-glmnet', 'r-cran-globals', 'r-cran-glue', 'r-cran-gmm', 'r-cran-gmp', 'r-cran-googledrive', 'r-cran-googlesheets4', 'r-cran-gower', 'r-cran-gparotation', 'r-cran-gplots', 'r-cran-gridbase', 'r-cran-gridextra', 'r-cran-gridgraphics', 'r-cran-gridsvg', 'r-cran-gsl', 'r-cran-gss', 'r-cran-gtable', 'r-cran-gtools', 'r-cran-hardhat', 'r-cran-haven', 'r-cran-here', 'r-cran-hexbin', 'r-cran-highr', 'r-cran-hmisc', 'r-cran-hms', 'r-cran-hsaur3', 'r-cran-htmltable', 'r-cran-htmltools', 'r-cran-htmlwidgets', 'r-cran-httptest2', 'r-cran-httpuv', 'r-cran-httr', 'r-cran-httr2', 'r-cran-hunspell', 'r-cran-hypergeo', 'r-cran-ids', 'r-cran-igraph', 'r-cran-ini', 'r-cran-inline', 'r-cran-insight', 'r-cran-intergraph', 'r-cran-interp', 'r-cran-inum', 'r-cran-ipred', 'r-cran-irace', 'r-cran-irdisplay', 'r-cran-irlba', 'r-cran-isoband', 'r-cran-iterators', 'r-cran-itertools', 'r-cran-janeaustenr', 'r-cran-jomo', 'r-cran-jpeg', 'r-cran-jquerylib', 'r-cran-jsonlite', 'r-cran-kableextra', 'r-cran-kernlab', 'r-cran-kernsmooth', 'r-cran-kmi', 'r-cran-knitr', 'r-cran-ks', 'r-cran-labeling', 'r-cran-labelled', 'r-cran-lambda.r', 'r-cran-later', 'r-cran-lattice', 'r-cran-latticeextra', 'r-cran-lava', 'r-cran-lavaan', 'r-cran-lavasearch2', 'r-cran-lazyeval', 'r-cran-lbfgsb3c', 'r-cran-leaps', 'r-cran-lhs', 'r-cran-libcoin', 'r-cran-lifecycle', 'r-cran-linprog', 'r-cran-lintr', 'r-cran-listenv', 'r-cran-littler', 'r-cran-lme4', 'r-cran-lmertest', 'r-cran-lmtest', 'r-cran-lobstr', 'r-cran-locfit', 'r-cran-logcondens', 'r-cran-logspline', 'r-cran-loo', 'r-cran-lpsolve', 'r-cran-lsmeans', 'r-cran-lubridate', 'r-cran-magic', 'r-cran-magick', 'r-cran-magrittr', 'r-cran-mapdata', 'r-cran-mapproj', 'r-cran-maps', 'r-cran-marginaleffects', 'r-cran-markdown', 'r-cran-mass', 'r-cran-matchit', 'r-cran-mathjaxr', 'r-cran-matrix', 'r-cran-matrixmodels', 'r-cran-matrixstats', 'r-cran-maxlik', 'r-cran-mclogit', 'r-cran-mclust', 'r-cran-mda', 'r-cran-memisc', 'r-cran-memoise', 'r-cran-metadat', 'r-cran-metafor', 'r-cran-mets', 'r-cran-mgcv', 'r-cran-mice', 'r-cran-microbenchmark', 'r-cran-mime', 'r-cran-miniui', 'r-cran-minqa', 'r-cran-misctools', 'r-cran-mitml', 'r-cran-mitools', 'r-cran-mlbench', 'r-cran-mlmetrics', 'r-cran-mlmrev', 'r-cran-mlr', 'r-cran-mnormt', 'r-cran-mockery', 'r-cran-modeldata', 'r-cran-modelmetrics', 'r-cran-modelr', 'r-cran-modeltools', 'r-cran-msm', 'r-cran-multcomp', 'r-cran-multcompview', 'r-cran-multicool', 'r-cran-munsell', 'r-cran-mvtnorm', 'r-cran-nanoarrow', 'r-cran-ncdf4', 'r-cran-network', 'r-cran-nleqslv', 'r-cran-nlme', 'r-cran-nloptr', 'r-cran-nmf', 'r-cran-nnet', 'r-cran-nnls', 'r-cran-numderiv', 'r-cran-openssl', 'r-cran-openxlsx', 'r-cran-optimparallel', 'r-cran-optimx', 'r-cran-ordinal', 'r-cran-packrat', 'r-cran-palmerpenguins', 'r-cran-pammtools', 'r-cran-pan', 'r-cran-pander', 'r-cran-parallelly', 'r-cran-parallelmap', 'r-cran-paramhelpers', 'r-cran-party', 'r-cran-partykit', 'r-cran-patchwork', 'r-cran-patrick', 'r-cran-pbapply', 'r-cran-pbivnorm', 'r-cran-pbkrtest', 'r-cran-pbmcapply', 'r-cran-pcapp', 'r-cran-pdftools', 'r-cran-pec', 'r-cran-permute', 'r-cran-phangorn', 'r-cran-pillar', 'r-cran-pingr', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgdown', 'r-cran-pkgkitten', 'r-cran-pkgload', 'r-cran-pki', 'r-cran-plm', 'r-cran-plogr', 'r-cran-plotmo', 'r-cran-plotrix', 'r-cran-plumber', 'r-cran-plyr', 'r-cran-png', 'r-cran-polspline', 'r-cran-polyclip', 'r-cran-polycor', 'r-cran-polynom', 'r-cran-poorman', 'r-cran-popepi', 'r-cran-posterior', 'r-cran-prabclus', 'r-cran-pracma', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-proc', 'r-cran-processx', 'r-cran-prodlim', 'r-cran-profmem', 'r-cran-profvis', 'r-cran-progress', 'r-cran-progressr', 'r-cran-projpred', 'r-cran-promises', 'r-cran-proxy', 'r-cran-ps', 'r-cran-pscl', 'r-cran-psych', 'r-cran-psychtools', 'r-cran-publish', 'r-cran-purrr', 'r-cran-purrrlyr', 'r-cran-pvclust', 'r-cran-qap', 'r-cran-qpdf', 'r-cran-qtl', 'r-cran-quadprog', 'r-cran-quantmod', 'r-cran-quantreg', 'r-cran-quickjsr', 'r-cran-r.cache', 'r-cran-r.devices', 'r-cran-r.methodss3', 'r-cran-r.oo', 'r-cran-r.rsp', 'r-cran-r.utils', 'r-cran-r6', 'r-cran-ragg', 'r-cran-randomforest', 'r-cran-ranger', 'r-cran-rann', 'r-cran-rappdirs', 'r-cran-raster', 'r-cran-rbibutils', 'r-cran-rcmdcheck', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rcpparmadillo', 'r-cran-rcppeigen', 'r-cran-rcppml', 'r-cran-rcppparallel', 'r-cran-rcppprogress', 'r-cran-rcpproll', 'r-cran-rcpptoml', 'r-cran-rcsdp', 'r-cran-rcurl', 'r-cran-rdpack', 'r-cran-readr', 'r-cran-readxl', 'r-cran-recipes', 'r-cran-registry', 'r-cran-relsurv', 'r-cran-rematch', 'r-cran-rematch2', 'r-cran-remotes', 'r-cran-renv', 'r-cran-repr', 'r-cran-reprex', 'r-cran-reshape', 'r-cran-reshape2', 'r-cran-reticulate', 'r-cran-rex', 'r-cran-rgl', 'r-cran-rhpcblasctl', 'r-cran-rio', 'r-cran-riskregression', 'r-cran-rlang', 'r-cran-rmarkdown', 'r-cran-rmpfr', 'r-cran-rmpi', 'r-cran-rms', 'r-cran-rmysql', 'r-cran-rngtools', 'r-cran-robumeta', 'r-cran-robust', 'r-cran-robustbase', 'r-cran-rocr', 'r-cran-rose', 'r-cran-roxygen2', 'r-cran-rpart', 'r-cran-rpostgresql', 'r-cran-rprojroot', 'r-cran-rrcov', 'r-cran-rsample', 'r-cran-rsconnect', 'r-cran-rsolnp', 'r-cran-rspectra', 'r-cran-rsqlite', 'r-cran-rstan', 'r-cran-rstanarm', 'r-cran-rstantools', 'r-cran-rstatix', 'r-cran-rstudioapi', 'r-cran-rsvg', 'r-cran-rtdists', 'r-cran-rtsne', 'r-cran-runit', 'r-cran-rversions', 'r-cran-rvest', 'r-cran-rwiener', 'r-cran-sandwich', 'r-cran-sass', 'r-cran-scales', 'r-cran-scatterplot3d', 'r-cran-selectr', 'r-cran-sendmailr', 'r-cran-seriation', 'r-cran-sessioninfo', 'r-cran-setrng', 'r-cran-sfsmisc', 'r-cran-shape', 'r-cran-shiny', 'r-cran-shinyjs', 'r-cran-shinystan', 'r-cran-shinythemes', 'r-cran-sjlabelled', 'r-cran-slider', 'r-cran-sm', 'r-cran-smcfcs', 'r-cran-sna', 'r-cran-snakecase', 'r-cran-sodium', 'r-cran-sourcetools', 'r-cran-sp', 'r-cran-spam', 'r-cran-sparsem', 'r-cran-spatial', 'r-cran-spelling', 'r-cran-splines2', 'r-cran-squarem', 'r-cran-stabledist', 'r-cran-stanheaders', 'r-cran-statmod', 'r-cran-statnet.common', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-strucchange', 'r-cran-survey', 'r-cran-survival', 'r-cran-svglite', 'r-cran-swagger', 'r-cran-sys', 'r-cran-systemfit', 'r-cran-systemfonts', 'r-cran-tensora', 'r-cran-terra', 'r-cran-testit', 'r-cran-testthat', 'r-cran-textshaping', 'r-cran-th.data', 'r-cran-thematic', 'r-cran-themis', 'r-cran-threejs', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-tidyverse', 'r-cran-tikzdevice', 'r-cran-timechange', 'r-cran-timedate', 'r-cran-timereg', 'r-cran-timeseries', 'r-cran-tinytest', 'r-cran-tinytex', 'r-cran-truncdist', 'r-cran-truncnorm', 'r-cran-tseries', 'r-cran-tsp', 'r-cran-ttr', 'r-cran-tufte', 'r-cran-tweenr', 'r-cran-tzdb', 'r-cran-ucminf', 'r-cran-unitizer', 'r-cran-urca', 'r-cran-urlchecker', 'r-cran-uroot', 'r-cran-usethis', 'r-cran-utf8', 'r-cran-uuid', 'r-cran-v8', 'r-cran-vcd', 'r-cran-vctrs', 'r-cran-vdiffr', 'r-cran-vegan', 'r-cran-venndiagram', 'r-cran-vgam', 'r-cran-vioplot', 'r-cran-vipor', 'r-cran-viridis', 'r-cran-viridislite', 'r-cran-vroom', 'r-cran-waldo', 'r-cran-warp', 'r-cran-webfakes', 'r-cran-webshot', 'r-cran-webutils', 'r-cran-whisker', 'r-cran-whoami', 'r-cran-withr', 'r-cran-writexl', 'r-cran-xfun', 'r-cran-xml', 'r-cran-xml2', 'r-cran-xmlparsedata', 'r-cran-xopen', 'r-cran-xtable', 'r-cran-xts', 'r-cran-yaml', 'r-cran-zeallot', 'r-cran-zip', 'r-cran-zoo', 'r-doc-html', 'r-other-mott-happy.hbrem', 'r-recommended', 'rake', 'raster3d', 'raxml', 'readline-common', 'readseq', 'rnahybrid', 'rpcsvc-proto', 'rtax', 'ruby', 'ruby-net-telnet', 'ruby-rubygems', 'ruby-sdbm:amd64', 'ruby-webrick', 'ruby-xmlrpc', 'ruby3.1', 'rubygems-integration', 'samtools', 'sensible-utils', 'seqan-apps', 'sgml-base', 'shared-mime-info', 'sibsim4', 'sigma-align', 'sim4', 'smalt', 'snap', 'soapdenovo', 'soapdenovo2', 'squizz', 'sra-toolkit', 'ssake', 'sse4.2-support', 'staden-io-lib-utils', 'sysstat', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 't-coffee', 't1utils', 'tabix', 'tasksel', 'tasksel-data', 'tcl', 'tcl8.6', 'tex-common', 'texlive-base', 'texlive-bibtex-extra', 'texlive-binaries', 'texlive-latex-base', 'theseus', 'tigr-glimmer', 'tk8.6-blt2.5', 'tm-align', 'tree-puzzle', 'tree-puzzle-doc', 'ttf-bitstream-vera', 'ucf', 'unicode-data', 'unixodbc-common', 'unzip', 'va-driver-all:amd64', 'vcftools', 'vdpau-driver-all:amd64', 'velvet', 'w3c-sgml-lib', 'wise', 'wise-data', 'x11-common', 'x11-utils', 'x11-xserver-utils', 'xauth', 'xdg-user-dirs', 'xdg-utils', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xml-core', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'zutty'] 14m16.6s DUMP: dpkg: warning: ignoring request to remove abyss which isn't installed (Reading database ... 5569 files and directories currently installed.) Purging configuration files for adduser (3.137) ... Purging configuration files for adwaita-icon-theme (47.0-1) ... dpkg: warning: ignoring request to remove aevol which isn't installed dpkg: warning: ignoring request to remove alien-hunter which isn't installed dpkg: warning: ignoring request to remove alsa-topology-conf which isn't installed dpkg: warning: ignoring request to remove alsa-ucm-conf which isn't installed dpkg: warning: ignoring request to remove altree which isn't installed dpkg: warning: ignoring request to remove amap-align which isn't installed dpkg: warning: ignoring request to remove apache2-bin which isn't installed dpkg: warning: ignoring request to remove aragorn which isn't installed dpkg: warning: ignoring request to remove arden which isn't installed dpkg: warning: ignoring request to remove at-spi2-common which isn't installed Purging configuration files for at-spi2-core (2.54.0-1) ... dpkg: warning: ignoring request to remove autodock which isn't installed dpkg: warning: ignoring request to remove autodock-vina which isn't installed dpkg: warning: ignoring request to remove autogrid which isn't installed dpkg: warning: ignoring request to remove bamtools which isn't installed Purging configuration files for bc (1.07.1-4) ... dpkg: warning: ignoring request to remove bcalm which isn't installed dpkg: warning: ignoring request to remove bcftools which isn't installed dpkg: warning: ignoring request to remove bedtools which isn't installed dpkg: warning: ignoring request to remove binutils which isn't installed Purging configuration files for binutils-common:amd64 (2.43.1-3) ... dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove bioperl which isn't installed dpkg: warning: ignoring request to remove bioperl-run which isn't installed dpkg: warning: ignoring request to remove biosquid which isn't installed Purging configuration files for blends-common (0.7.7) ... dpkg: warning: ignoring request to remove blt which isn't installed dpkg: warning: ignoring request to remove bowtie which isn't installed dpkg: warning: ignoring request to remove bowtie2 which isn't installed Purging configuration files for boxshade (3.3.1-14) ... dpkg: warning: ignoring request to remove bsdextrautils which isn't installed dpkg: warning: ignoring request to remove build-essential which isn't installed dpkg: warning: ignoring request to remove bwa which isn't installed dpkg: warning: ignoring request to remove bzip2 which isn't installed dpkg: warning: ignoring request to remove bzip2-doc which isn't installed Purging configuration files for ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. 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Purging configuration files for dirmngr (2.2.43-8+b1) ... dpkg: warning: ignoring request to remove discosnp which isn't installed dpkg: warning: ignoring request to remove disulfinder which isn't installed dpkg: warning: ignoring request to remove disulfinder-data which isn't installed dpkg: warning: ignoring request to remove dmidecode which isn't installed dpkg: warning: ignoring request to remove dmsetup which isn't installed dpkg: warning: ignoring request to remove dnaclust which isn't installed Purging configuration files for docutils-common (0.21.2+dfsg-2) ... Purging configuration files for dpkg-dev (1.22.11) ... dpkg: warning: ignoring request to remove dssp which isn't installed dpkg: warning: ignoring request to remove dvisvgm which isn't installed Purging configuration files for emacsen-common (3.0.5) ... dpkg: warning: ignoring request to remove embassy-domainatrix which isn't installed dpkg: warning: ignoring request to remove embassy-domalign which isn't installed dpkg: warning: ignoring request to remove embassy-domsearch which isn't installed dpkg: warning: ignoring request to remove emboss which isn't installed dpkg: warning: ignoring request to remove emboss-data which isn't installed dpkg: warning: ignoring request to remove emboss-lib which isn't installed dpkg: warning: ignoring request to remove exonerate which isn't installed dpkg: warning: ignoring request to remove fakeroot which isn't installed Purging configuration files for fastdnaml (1.2.2-17) ... Purging configuration files for fastlink (4.1P-fix100+dfsg-5) ... Purging configuration files for fastqc (0.12.1+dfsg-4) ... dpkg: warning: ignoring request to remove fasttree which isn't installed dpkg: warning: ignoring request to remove file which isn't installed dpkg: warning: ignoring request to remove fitgcp which isn't installed dpkg: warning: ignoring request to remove flexbar which isn't installed Purging configuration files for fontconfig (2.15.0-1.1) ... Purging configuration files for fontconfig-config (2.15.0-1.1) ... dpkg: warning: while removing fontconfig-config, directory '/etc/fonts/conf.d' not empty so not removed dpkg: warning: ignoring request to remove fonts-circos-symbols which isn't installed dpkg: warning: ignoring request to remove fonts-cmu which isn't installed Purging configuration files for fonts-dejavu-core (2.37-8) ... dpkg: warning: ignoring request to remove fonts-dejavu-extra which isn't installed Purging configuration files for fonts-dejavu-mono (2.37-8) ... Purging configuration files for fonts-droid-fallback (1:6.0.1r16-1.1) ... Purging configuration files for fonts-font-awesome (5.0.10+really4.7.0~dfsg-4.1) ... dpkg: warning: ignoring request to remove fonts-glyphicons-halflings which isn't installed dpkg: warning: ignoring request to remove fonts-lato which isn't installed dpkg: warning: ignoring request to remove fonts-liberation which isn't installed dpkg: warning: ignoring request to remove fonts-liberation-sans-narrow which isn't installed Purging configuration files for fonts-lmodern (2.005-1) ... dpkg: warning: ignoring request to remove fonts-lyx which isn't installed dpkg: warning: ignoring request to remove fonts-mathjax which isn't installed Purging configuration files for fonts-noto-mono (20201225-2) ... dpkg: warning: while removing fonts-noto-mono, directory '/etc/fonts' not empty so not removed Purging configuration files for fonts-urw-base35 (20200910-8) ... dpkg: warning: ignoring request to remove freecontact which isn't installed dpkg: warning: ignoring request to remove fsa which isn't installed dpkg: warning: ignoring request to remove g++ which isn't installed dpkg: warning: ignoring request to remove g++-14 which isn't installed dpkg: warning: ignoring request to remove g++-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove g++-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gasic which isn't installed dpkg: warning: ignoring request to remove gatb-core which isn't installed Purging configuration files for gawk (1:5.2.1-2+b1) ... dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-14 which isn't installed dpkg: warning: ignoring request to remove gcc-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gcc-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gdal-data which isn't installed dpkg: warning: ignoring request to remove gdal-plugins which isn't installed dpkg: warning: ignoring request to remove genometools which isn't installed dpkg: warning: ignoring request to remove genometools-common which isn't installed dpkg: warning: ignoring request to remove gff2aplot which isn't installed dpkg: warning: ignoring request to remove gff2ps which isn't installed dpkg: warning: ignoring request to remove gfortran which isn't installed dpkg: warning: ignoring request to remove gfortran-14 which isn't installed dpkg: warning: ignoring request to remove gfortran-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gfortran-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove ghostscript which isn't installed dpkg: warning: ignoring request to remove glam2 which isn't installed dpkg: warning: ignoring request to remove gmap which isn't installed dpkg: warning: ignoring request to remove gnupg which isn't installed dpkg: warning: ignoring request to remove gnupg-l10n which isn't installed dpkg: warning: ignoring request to remove gnupg-utils which isn't installed dpkg: warning: ignoring request to remove gpg which isn't installed Purging configuration files for gpg-agent (2.2.43-8+b1) ... dpkg: warning: ignoring request to remove gpg-wks-client which isn't installed dpkg: warning: ignoring request to remove gpgconf which isn't installed dpkg: warning: ignoring request to remove gpgsm which isn't installed Purging configuration files for graphicsmagick (1.4+really1.3.45-1) ... Purging configuration files for graphviz (2.42.4-2) ... dpkg: warning: ignoring request to remove grinder which isn't installed dpkg: warning: ignoring request to remove gromacs which isn't installed dpkg: warning: ignoring request to remove gromacs-data which isn't installed dpkg: warning: ignoring request to remove gsettings-desktop-schemas which isn't installed dpkg: warning: ignoring request to remove gtk-update-icon-cache which isn't installed dpkg: warning: ignoring request to remove hhsuite which isn't installed dpkg: warning: ignoring request to remove hhsuite-data which isn't installed dpkg: warning: ignoring request to remove hicolor-icon-theme which isn't installed dpkg: warning: ignoring request to remove hisat2 which isn't installed dpkg: warning: ignoring request to remove hmmer which isn't installed dpkg: warning: ignoring request to remove hunspell-en-gb which isn't installed Purging configuration files for hunspell-en-us (1:2020.12.07-2) ... dpkg: warning: ignoring request to remove i965-va-driver which isn't installed Purging configuration files for ibverbs-providers:amd64 (52.0-2) ... dpkg: warning: ignoring request to remove icu-devtools which isn't installed dpkg: warning: ignoring request to remove idba which isn't installed dpkg: warning: ignoring request to remove imagemagick which isn't installed Purging configuration files for imagemagick-6-common (8:6.9.13.12+dfsg1-1) ... dpkg: warning: ignoring request to remove imagemagick-6.q16 which isn't installed dpkg: warning: ignoring request to remove infernal which isn't installed dpkg: warning: ignoring request to remove intel-media-va-driver which isn't installed dpkg: warning: ignoring request to remove isa-support which isn't installed dpkg: warning: ignoring request to remove isympy-common which isn't installed dpkg: warning: ignoring request to remove isympy3 which isn't installed Purging configuration files for java-common (0.76) ... dpkg: warning: ignoring request to remove java-wrappers which isn't installed Purging configuration files for javascript-common (11+nmu1) ... dpkg: warning: ignoring request to remove jellyfish which isn't installed dpkg: warning: ignoring request to remove kalign which isn't installed dpkg: warning: ignoring request to remove kissplice which isn't installed dpkg: warning: ignoring request to remove krb5-locales which isn't installed dpkg: warning: ignoring request to remove lagan which isn't installed dpkg: warning: ignoring request to remove laptop-detect which isn't installed dpkg: warning: ignoring request to remove last-align which isn't installed dpkg: warning: ignoring request to remove lib32gcc-s1 which isn't installed dpkg: warning: ignoring request to remove lib32stdc++6 which isn't installed dpkg: warning: ignoring request to remove libaacs0 which isn't installed dpkg: warning: ignoring request to remove libabsl20230802 which isn't installed dpkg: warning: ignoring request to remove libace-perl which isn't installed 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libapache2-mod-perl2 (2.0.13-1+b3) ... dpkg: warning: ignoring request to remove libapache2-reload-perl which isn't installed dpkg: warning: ignoring request to remove libapparmor1 which isn't installed dpkg: warning: ignoring request to remove libapr1t64 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-dbd-sqlite3 which isn't installed dpkg: warning: ignoring request to remove libaprutil1-ldap which isn't installed dpkg: warning: ignoring request to remove libaprutil1t64 which isn't installed dpkg: warning: ignoring request to remove libargtable2-0 which isn't installed dpkg: warning: ignoring request to remove libarmadillo14 which isn't installed dpkg: warning: ignoring request to remove libarpack2t64 which isn't installed dpkg: warning: ignoring request to remove libarray-compare-perl which isn't installed dpkg: warning: ignoring request to remove libasan8 which isn't installed dpkg: warning: ignoring request to remove libasound2-data which isn't installed dpkg: warning: ignoring request to remove libasound2t64 which isn't installed dpkg: warning: ignoring request to remove libass9 which isn't installed dpkg: warning: ignoring request to remove libassuan9 which isn't installed dpkg: warning: ignoring request to remove libasyncns0 which isn't installed dpkg: warning: ignoring request to remove libatinject-jsr330-api-java which isn't installed dpkg: warning: ignoring request to remove libatk-bridge2.0-0t64 which isn't installed dpkg: warning: ignoring request to remove libatk-wrapper-java which isn't installed dpkg: warning: ignoring request to remove libatk-wrapper-java-jni which isn't installed dpkg: warning: ignoring request to remove libatk1.0-0t64 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libatspi2.0-0t64 which isn't installed dpkg: warning: ignoring request to remove libauthen-sasl-perl which isn't installed dpkg: warning: ignoring request to remove libavahi-client3 which isn't installed dpkg: warning: ignoring request to remove libavahi-common-data which isn't installed dpkg: warning: ignoring request to remove libavahi-common3 which isn't installed dpkg: warning: ignoring request to remove libavcodec61 which isn't installed dpkg: warning: ignoring request to remove libavfilter10 which isn't installed dpkg: warning: ignoring request to remove libavformat61 which isn't installed dpkg: warning: ignoring request to remove libavif16 which isn't installed dpkg: warning: ignoring request to remove libavutil59 which isn't installed dpkg: warning: ignoring request to remove libb-hooks-endofscope-perl which isn't installed dpkg: warning: ignoring request to remove libb-hooks-op-check-perl which isn't installed dpkg: warning: ignoring request to remove libbambamc0 which isn't installed dpkg: warning: ignoring request to remove libbamtools2.5.2 which isn't installed dpkg: warning: ignoring request to remove libbarclay-java which isn't installed dpkg: warning: ignoring request to remove libbdplus0 which isn't installed dpkg: warning: ignoring request to remove libbibtex-parser-perl which isn't installed dpkg: warning: ignoring request to remove libbinutils which isn't installed dpkg: warning: ignoring request to remove libbio-asn1-entrezgene-perl which isn't installed dpkg: warning: ignoring request to remove libbio-cluster-perl which isn't installed dpkg: warning: ignoring request to remove libbio-eutilities-perl which isn't installed dpkg: warning: ignoring request to remove libbio-featureio-perl which isn't installed dpkg: warning: ignoring request to remove libbio-perl-perl which isn't installed dpkg: warning: ignoring request to remove libbio-perl-run-perl which isn't installed dpkg: warning: ignoring request to remove libbio-tools-run-remoteblast-perl which isn't installed dpkg: warning: ignoring request to remove libbio-variation-perl which isn't installed dpkg: warning: ignoring request to remove libbiojava-java which isn't installed dpkg: warning: ignoring request to remove libbiojava1.9-java which isn't installed dpkg: warning: ignoring request to remove libbit-vector-perl which isn't installed dpkg: warning: ignoring request to remove libblas-dev which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libblosc1 which isn't installed dpkg: warning: ignoring request to remove libbluray2 which isn't installed dpkg: warning: ignoring request to remove libboost-dev which isn't installed dpkg: warning: ignoring request to remove libboost-filesystem1.83.0 which isn't installed dpkg: warning: ignoring request to remove libboost-mpi1.83.0 which isn't installed dpkg: warning: ignoring request to remove libboost-program-options1.83.0 which isn't installed dpkg: warning: ignoring request to remove libboost-serialization1.83.0 which isn't installed dpkg: warning: ignoring request to remove 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configuration files for libcifpp-data (5.0.7.1-3) ... dpkg: warning: ignoring request to remove libcifpp5 which isn't installed dpkg: warning: ignoring request to remove libcjson1 which isn't installed dpkg: warning: ignoring request to remove libclang-common-18-dev which isn't installed dpkg: warning: ignoring request to remove libclang-cpp18 which isn't installed dpkg: warning: ignoring request to remove libclang-rt-18-dev which isn't installed dpkg: warning: ignoring request to remove libclass-data-inheritable-perl which isn't installed dpkg: warning: ignoring request to remove libclass-inspector-perl which isn't installed dpkg: warning: ignoring request to remove libclass-method-modifiers-perl which isn't installed dpkg: warning: ignoring request to remove libclass-xsaccessor-perl which isn't installed dpkg: warning: ignoring request to remove libclc-18 which isn't installed dpkg: warning: ignoring request to remove libclc-18-dev which isn't installed dpkg: warning: ignoring 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isn't installed dpkg: warning: ignoring request to remove r-cran-hexbin which isn't installed dpkg: warning: ignoring request to remove r-cran-highr which isn't installed dpkg: warning: ignoring request to remove r-cran-hmisc which isn't installed dpkg: warning: ignoring request to remove r-cran-hms which isn't installed dpkg: warning: ignoring request to remove r-cran-hsaur3 which isn't installed dpkg: warning: ignoring request to remove r-cran-htmltable which isn't installed dpkg: warning: ignoring request to remove r-cran-htmltools which isn't installed dpkg: warning: ignoring request to remove r-cran-htmlwidgets which isn't installed dpkg: warning: ignoring request to remove r-cran-httptest2 which isn't installed dpkg: warning: ignoring request to remove r-cran-httpuv which isn't installed dpkg: warning: ignoring request to remove r-cran-httr which isn't installed dpkg: warning: ignoring request to remove r-cran-httr2 which isn't installed dpkg: warning: ignoring request to remove r-cran-hunspell which isn't installed dpkg: warning: ignoring request to remove r-cran-hypergeo which isn't installed dpkg: warning: ignoring request to remove r-cran-ids which isn't installed dpkg: warning: ignoring request to remove r-cran-igraph which isn't installed dpkg: warning: ignoring request to remove r-cran-ini which isn't installed dpkg: warning: ignoring request to remove r-cran-inline which isn't installed dpkg: warning: ignoring request to remove r-cran-insight which isn't installed dpkg: warning: ignoring request to remove r-cran-intergraph which isn't installed dpkg: warning: ignoring request to remove r-cran-interp which isn't installed dpkg: warning: ignoring request to remove r-cran-inum which isn't installed dpkg: warning: ignoring request to remove r-cran-ipred which isn't installed dpkg: warning: ignoring request to remove r-cran-irace which isn't installed dpkg: warning: ignoring request to remove r-cran-irdisplay which isn't installed dpkg: warning: ignoring 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request to remove r-cran-xtable which isn't installed dpkg: warning: ignoring request to remove r-cran-xts which isn't installed dpkg: warning: ignoring request to remove r-cran-yaml which isn't installed dpkg: warning: ignoring request to remove r-cran-zeallot which isn't installed dpkg: warning: ignoring request to remove r-cran-zip which isn't installed dpkg: warning: ignoring request to remove r-cran-zoo which isn't installed dpkg: warning: ignoring request to remove r-doc-html which isn't installed dpkg: warning: ignoring request to remove r-other-mott-happy.hbrem which isn't installed dpkg: warning: ignoring request to remove r-recommended which isn't installed dpkg: warning: ignoring request to remove rake which isn't installed dpkg: warning: ignoring request to remove raster3d which isn't installed dpkg: warning: ignoring request to remove raxml which isn't installed Purging configuration files for readline-common (8.2-5) ... dpkg: warning: ignoring request to remove readseq which isn't installed dpkg: warning: ignoring request to remove rnahybrid which isn't installed dpkg: warning: ignoring request to remove rpcsvc-proto which isn't installed dpkg: warning: ignoring request to remove rtax which isn't installed dpkg: warning: ignoring request to remove ruby which isn't installed dpkg: warning: ignoring request to remove ruby-net-telnet which isn't installed dpkg: warning: ignoring request to remove ruby-rubygems which isn't installed dpkg: warning: ignoring request to remove ruby-sdbm which isn't installed dpkg: warning: ignoring request to remove ruby-webrick which isn't installed dpkg: warning: ignoring request to remove ruby-xmlrpc which isn't installed dpkg: warning: ignoring request to remove ruby3.1 which isn't installed dpkg: warning: ignoring request to remove rubygems-integration which isn't installed dpkg: warning: ignoring request to remove samtools which isn't installed dpkg: warning: ignoring request to remove sensible-utils which isn't installed dpkg: warning: ignoring request to remove seqan-apps which isn't installed Purging configuration files for sgml-base (1.31) ... Purging configuration files for shared-mime-info (2.4-5) ... dpkg: warning: ignoring request to remove sibsim4 which isn't installed dpkg: warning: ignoring request to remove sigma-align which isn't installed dpkg: warning: ignoring request to remove sim4 which isn't installed dpkg: warning: ignoring request to remove smalt which isn't installed dpkg: warning: ignoring request to remove snap which isn't installed dpkg: warning: ignoring request to remove soapdenovo which isn't installed dpkg: warning: ignoring request to remove soapdenovo2 which isn't installed dpkg: warning: ignoring request to remove squizz which isn't installed Purging configuration files for sra-toolkit (3.0.3+dfsg-9) ... dpkg: warning: ignoring request to remove ssake which isn't installed Purging configuration files for sse4.2-support (24) ... dpkg: warning: ignoring request to remove staden-io-lib-utils which isn't installed Purging configuration files for sysstat (12.7.5-2) ... Purging configuration files for systemd (256.6-1) ... dpkg: warning: ignoring request to remove systemd-cryptsetup which isn't installed dpkg: warning: ignoring request to remove systemd-sysv which isn't installed Purging configuration files for systemd-timesyncd (256.6-1) ... dpkg: warning: ignoring request to remove t-coffee which isn't installed dpkg: warning: ignoring request to remove t1utils which isn't installed dpkg: warning: ignoring request to remove tabix which isn't installed Purging configuration files for tasksel (3.75) ... dpkg: warning: ignoring request to remove tasksel-data which isn't installed dpkg: warning: ignoring request to remove tcl which isn't installed dpkg: warning: ignoring request to remove tcl8.6 which isn't installed Purging configuration files for tex-common (6.18) ... Purging configuration files for texlive-base (2024.20240829-2) ... Purging configuration files for texlive-bibtex-extra (2024.20240829-1) ... dpkg: warning: ignoring request to remove texlive-binaries which isn't installed Purging configuration files for texlive-latex-base (2024.20240829-2) ... dpkg: warning: ignoring request to remove theseus which isn't installed dpkg: warning: ignoring request to remove tigr-glimmer which isn't installed dpkg: warning: ignoring request to remove tk8.6-blt2.5 which isn't installed dpkg: warning: ignoring request to remove tm-align which isn't installed Purging configuration files for tree-puzzle (5.3~rc16+dfsg-10) ... dpkg: warning: ignoring request to remove tree-puzzle-doc which isn't installed dpkg: warning: ignoring request to remove ttf-bitstream-vera which isn't installed Purging configuration files for ucf (3.0043+nmu1) ... dpkg: warning: ignoring request to remove unicode-data which isn't installed Purging configuration files for unixodbc-common (2.3.12-1) ... Purging configuration files for unzip (6.0-28) ... dpkg: warning: ignoring request to remove va-driver-all which isn't installed dpkg: warning: ignoring request to remove vcftools which isn't installed dpkg: warning: ignoring request to remove vdpau-driver-all which isn't installed dpkg: warning: ignoring request to remove velvet which isn't installed Purging configuration files for w3c-sgml-lib (1.3-3) ... dpkg: warning: ignoring request to remove wise which isn't installed dpkg: warning: ignoring request to remove wise-data which isn't installed Purging configuration files for x11-common (1:7.7+23.1) ... Purging configuration files for x11-utils (7.7+7) ... Purging configuration files for x11-xserver-utils (7.7+10+b1) ... dpkg: warning: ignoring request to remove xauth which isn't installed Purging configuration files for xdg-user-dirs (0.18-1) ... dpkg: warning: ignoring request to remove xdg-utils which isn't installed dpkg: warning: ignoring request to remove xfonts-encodings which isn't installed Purging configuration files for xfonts-utils (1:7.7+7) ... dpkg: warning: ignoring request to remove xkb-data which isn't installed Purging configuration files for xml-core (0.19) ... dpkg: warning: ignoring request to remove xz-utils which isn't installed dpkg: warning: ignoring request to remove zip which isn't installed dpkg: warning: ignoring request to remove zlib1g-dev which isn't installed dpkg: warning: ignoring request to remove zutty which isn't installed 14m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg', '--purge', 'abyss', 'adduser', 'adwaita-icon-theme', 'aevol', 'alien-hunter', 'alsa-topology-conf', 'alsa-ucm-conf', 'altree', 'amap-align', 'apache2-bin', 'aragorn', 'arden', 'at-spi2-common', 'at-spi2-core', 'autodock', 'autodock-vina', 'autogrid', 'bamtools', 'bc', 'bcalm', 'bcftools', 'bedtools', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'bioperl', 'bioperl-run', 'biosquid', 'blends-common', 'blt', 'bowtie', 'bowtie2', 'boxshade', 'bsdextrautils', 'build-essential', 'bwa', 'bzip2', 'bzip2-doc', 'ca-certificates', 'ca-certificates-java', 'cassiopee', 'cd-hit', 'cdbfasta', 'circos', 'circos-tools', 'clearcut', 'clonalframe', 'clustalo', 'clustalw', 'concavity', 'conservation-code', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'datamash', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dconf-gsettings-backend:amd64', 'dconf-service', 'default-jdk-headless', 'default-jre', 'default-jre-headless', 'dialign', 'dialign-tx', 'dialign-tx-data', 'dictionaries-common', 'dirmngr', 'discosnp', 'disulfinder', 'disulfinder-data', 'dmidecode', 'dmsetup', 'dnaclust', 'docutils-common', 'dpkg-dev', 'dssp', 'dvisvgm', 'emacsen-common', 'embassy-domainatrix', 'embassy-domalign', 'embassy-domsearch', 'emboss', 'emboss-data', 'emboss-lib', 'exonerate', 'fakeroot', 'fastdnaml', 'fastlink', 'fastqc', 'fasttree', 'file', 'fitgcp', 'flexbar', 'fontconfig', 'fontconfig-config', 'fonts-circos-symbols', 'fonts-cmu', 'fonts-dejavu-core', 'fonts-dejavu-extra', 'fonts-dejavu-mono', 'fonts-droid-fallback', 'fonts-font-awesome', 'fonts-glyphicons-halflings', 'fonts-lato', 'fonts-liberation', 'fonts-liberation-sans-narrow', 'fonts-lmodern', 'fonts-lyx', 'fonts-mathjax', 'fonts-noto-mono', 'fonts-urw-base35', 'freecontact', 'fsa', 'g++', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gasic', 'gatb-core', 'gawk', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'gdal-data', 'gdal-plugins:amd64', 'genometools', 'genometools-common', 'gff2aplot', 'gff2ps', 'gfortran', 'gfortran-14', 'gfortran-14-x86-64-linux-gnu', 'gfortran-x86-64-linux-gnu', 'ghostscript', 'glam2', 'gmap', 'gnupg', 'gnupg-l10n', 'gnupg-utils', 'gpg', 'gpg-agent', 'gpg-wks-client', 'gpgconf', 'gpgsm', 'graphicsmagick', 'graphviz', 'grinder', 'gromacs', 'gromacs-data', 'gsettings-desktop-schemas', 'gtk-update-icon-cache', 'hhsuite', 'hhsuite-data', 'hicolor-icon-theme', 'hisat2', 'hmmer', 'hunspell-en-gb', 'hunspell-en-us', 'i965-va-driver:amd64', 'ibverbs-providers:amd64', 'icu-devtools', 'idba', 'imagemagick', 'imagemagick-6-common', 'imagemagick-6.q16', 'infernal', 'intel-media-va-driver:amd64', 'isa-support:amd64', 'isympy-common', 'isympy3', 'java-common', 'java-wrappers', 'javascript-common', 'jellyfish', 'kalign', 'kissplice', 'krb5-locales', 'lagan', 'laptop-detect', 'last-align', 'lib32gcc-s1', 'lib32stdc++6', 'libaacs0:amd64', 'libabsl20230802:amd64', 'libace-perl', 'libaec0:amd64', 'libalgorithm-diff-perl', 'libalgorithm-diff-xs-perl:amd64', 'libalgorithm-merge-perl', 'libalgorithm-munkres-perl', 'libamd-comgr2:amd64', 'libamd3:amd64', 'libamdhip64-5', 'libann0', 'libaom3:amd64', 'libapache-dbi-perl', 'libapache-pom-java', 'libapache2-mod-perl2', 'libapache2-reload-perl', 'libapparmor1:amd64', 'libapr1t64:amd64', 'libaprutil1-dbd-sqlite3:amd64', 'libaprutil1-ldap:amd64', 'libaprutil1t64:amd64', 'libargtable2-0', 'libarmadillo14', 'libarpack2t64:amd64', 'libarray-compare-perl', 'libasan8:amd64', 'libasound2-data', 'libasound2t64:amd64', 'libass9:amd64', 'libassuan9:amd64', 'libasyncns0:amd64', 'libatinject-jsr330-api-java', 'libatk-bridge2.0-0t64:amd64', 'libatk-wrapper-java', 'libatk-wrapper-java-jni:amd64', 'libatk1.0-0t64:amd64', 'libatomic1:amd64', 'libatspi2.0-0t64:amd64', 'libauthen-sasl-perl', 'libavahi-client3:amd64', 'libavahi-common-data:amd64', 'libavahi-common3:amd64', 'libavcodec61:amd64', 'libavfilter10:amd64', 'libavformat61:amd64', 'libavif16:amd64', 'libavutil59:amd64', 'libb-hooks-endofscope-perl', 'libb-hooks-op-check-perl:amd64', 'libbambamc0:amd64', 'libbamtools2.5.2:amd64', 'libbarclay-java', 'libbdplus0:amd64', 'libbibtex-parser-perl', 'libbinutils:amd64', 'libbio-asn1-entrezgene-perl', 'libbio-cluster-perl', 'libbio-eutilities-perl', 'libbio-featureio-perl', 'libbio-perl-perl', 'libbio-perl-run-perl', 'libbio-tools-run-remoteblast-perl', 'libbio-variation-perl', 'libbiojava-java', 'libbiojava1.9-java', 'libbit-vector-perl:amd64', 'libblas-dev:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libbluray2:amd64', 'libboost-dev:amd64', 'libboost-filesystem1.83.0:amd64', 'libboost-mpi1.83.0', 'libboost-program-options1.83.0:amd64', 'libboost-serialization1.83.0:amd64', 'libboost-thread1.83.0:amd64', 'libboost1.83-dev:amd64', 'libbrotli1:amd64', 'libbs2b0:amd64', 'libbsd-resource-perl', 'libbytecode-java', 'libbz2-dev:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libc6-i386', 'libcache-cache-perl', 'libcairo-gobject2:amd64', 'libcairo2:amd64', 'libcapture-tiny-perl', 'libcares2:amd64', 'libcarp-always-perl', 'libcarp-clan-perl', 'libcassie1v5', 'libcbor0.10:amd64', 'libcc1-0:amd64', 'libcdt5:amd64', 'libcfitsio10t64:amd64', 'libcgi-fast-perl', 'libcgi-pm-perl', 'libcgraph6:amd64', 'libchromaprint1:amd64', 'libcifpp-data', 'libcifpp5:amd64', 'libcjson1:amd64', 'libclang-common-18-dev:amd64', 'libclang-cpp18', 'libclang-rt-18-dev:amd64', 'libclass-data-inheritable-perl', 'libclass-inspector-perl', 'libclass-method-modifiers-perl', 'libclass-xsaccessor-perl', 'libclc-18', 'libclc-18-dev', 'libclone-perl:amd64', 'libcloudproviders0:amd64', 'libcodec2-1.2:amd64', 'libcolamd3:amd64', 'libcolord2:amd64', 'libcommons-cli-java', 'libcommons-codec-java', 'libcommons-collections3-java', 'libcommons-compress-java', 'libcommons-dbcp-java', 'libcommons-io-java', 'libcommons-jexl2-java', 'libcommons-lang3-java', 'libcommons-logging-java', 'libcommons-math3-java', 'libcommons-parent-java', 'libcommons-pool-java', 'libconfig-general-perl', 'libconvert-binary-c-perl', 'libconvert-binhex-perl', 'libcppunit-1.15-0:amd64', 'libcrypt-dev:amd64', 'libcrypt-rc4-perl', 'libcryptsetup12:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcups2t64:amd64', 'libcurl3t64-gnutls:amd64', 'libcurl4t64:amd64', 'libdata-dump-perl', 'libdata-dumper-simple-perl', 'libdata-stag-perl', 'libdate-calc-perl', 'libdate-calc-xs-perl:amd64', 'libdate-manip-perl', 'libdatrie1:amd64', 'libdav1d7:amd64', 'libdbd-mysql-perl:amd64', 'libdbd-pg-perl', 'libdbd-sqlite3-perl:amd64', 'libdbi-perl:amd64', 'libdbus-1-3:amd64', 'libdconf1:amd64', 'libde265-0:amd64', 'libdeflate-dev:amd64', 'libdeflate0:amd64', 'libdevel-callchecker-perl:amd64', 'libdevel-stacktrace-perl', 'libdevel-symdump-perl', 'libdevmapper1.02.1:amd64', 'libdigest-perl-md5-perl', 'libdivsufsort3:amd64', 'libdjvulibre-text', 'libdjvulibre21:amd64', 'libdpkg-perl', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-intel1:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libdvdnav4:amd64', 'libdvdread8t64:amd64', 'libdynaloader-functions-perl', 'libedit2:amd64', 'libegl-mesa0:amd64', 'libegl1:amd64', 'libelf1t64:amd64', 'libencode-locale-perl', 'libencode-perl:amd64', 'libepoxy0:amd64', 'liberror-perl', 'liberror-prone-java', 'libevent-core-2.1-7t64:amd64', 'libevent-pthreads-2.1-7t64:amd64', 'libexception-class-perl', 'libexpat1:amd64', 'libexporter-tiny-perl', 'libfabric1:amd64', 'libfakeroot:amd64', 'libfcgi-bin', 'libfcgi-perl', 'libfcgi0t64:amd64', 'libfftw3-double3:amd64', 'libfftw3-single3:amd64', 'libfido2-1:amd64', 'libfile-basedir-perl', 'libfile-desktopentry-perl', 'libfile-fcntllock-perl', 'libfile-listing-perl', 'libfile-mimeinfo-perl', 'libfile-slurp-tiny-perl', 'libfile-sort-perl', 'libfindbin-libs-perl', 'libflac12t64:amd64', 'libflite1:amd64', 'libfont-afm-perl', 'libfont-ttf-perl', 'libfontconfig1:amd64', 'libfontenc1:amd64', 'libfreecontact0t64:amd64', 'libfreemarker-java', 'libfreetype6:amd64', 'libfreexl1:amd64', 'libfreezethaw-perl', 'libfribidi0:amd64', 'libfyba0t64:amd64', 'libg20', 'libgatbcore3:amd64', 'libgatk-native-bindings-java', 'libgav1-1:amd64', 'libgbm1:amd64', 'libgcc-14-dev:amd64', 'libgclib3:amd64', 'libgd-perl', 'libgd3:amd64', 'libgdal35:amd64', 'libgdbm-compat4t64:amd64', 'libgdbm6t64:amd64', 'libgdk-pixbuf-2.0-0:amd64', 'libgdk-pixbuf2.0-bin', 'libgdk-pixbuf2.0-common', 'libgeos-c1t64:amd64', 'libgeos3.13.0:amd64', 'libgeotiff5:amd64', 'libgetopt-euclid-perl', 'libgetopt-simple-perl', 'libgflags2.2', 'libgfortran-14-dev:amd64', 'libgfortran5:amd64', 'libgif7:amd64', 'libgit2-1.7:amd64', 'libgkl-java', 'libgkl-jni', 'libgl1:amd64', 'libgl1-mesa-dri:amd64', 'libglapi-mesa:amd64', 'libgles2:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglpk40:amd64', 'libglu1-mesa:amd64', 'libglvnd0:amd64', 'libglx-mesa0:amd64', 'libglx0:amd64', 'libgme0:amd64', 'libgomp1:amd64', 'libgoogle-glog0v6t64', 'libgoogle-gson-java', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraph-perl', 'libgraphics-colornames-perl', 'libgraphics-colorobject-perl', 'libgraphicsmagick-q16-3t64', 'libgraphite2-3:amd64', 'libgraphviz-perl', 'libgromacs9:amd64', 'libgs-common', 'libgs10:amd64', 'libgs10-common', 'libgsl28:amd64', 'libgslcblas0:amd64', 'libgsm1:amd64', 'libgssapi-krb5-2:amd64', 'libgtk-3-0t64:amd64', 'libgtk-3-bin', 'libgtk-3-common', 'libgts-0.7-5t64:amd64', 'libgts-bin', 'libguava-java', 'libgumbo2:amd64', 'libgvc6', 'libgvpr2:amd64', 'libharfbuzz0b:amd64', 'libhdf4-0-alt:amd64', 'libhdf5-103-1t64:amd64', 'libhdf5-hl-100t64:amd64', 'libheap-perl', 'libheif-plugin-aomenc:amd64', 'libheif-plugin-dav1d:amd64', 'libheif-plugin-libde265:amd64', 'libheif-plugin-x265:amd64', 'libheif1:amd64', 'libhmsbeagle1v5:amd64', 'libhpdf-2.3.0:amd64', 'libhsa-runtime64-1:amd64', 'libhsakmt1:amd64', 'libhtml-form-perl', 'libhtml-format-perl', 'libhtml-parser-perl:amd64', 'libhtml-tableextract-perl', 'libhtml-tagset-perl', 'libhtml-tree-perl', 'libhts3t64:amd64', 'libhtscodecs2:amd64', 'libhtsjdk-java', 'libhttp-cookies-perl', 'libhttp-daemon-perl', 'libhttp-date-perl', 'libhttp-message-perl', 'libhttp-negotiate-perl', 'libhttp-parser2.9:amd64', 'libhttpclient-java', 'libhttpcore-java', 'libhunspell-1.7-0:amd64', 'libhwasan0:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libhwy1t64:amd64', 'libibmad5:amd64', 'libibumad3:amd64', 'libibverbs1:amd64', 'libice6:amd64', 'libicu-dev:amd64', 'libicu72:amd64', 'libidn12:amd64', 'libigdgmm12:amd64', 'libijs-0.35:amd64', 'libimagequant0:amd64', 'libimath-3-1-29t64:amd64', 'libimport-into-perl', 'libio-all-perl', 'libio-compress-brotli-perl', 'libio-html-perl', 'libio-pty-perl', 'libio-sessiondata-perl', 'libio-socket-ssl-perl', 'libio-string-perl', 'libio-stringy-perl', 'libipc-run-perl', 'libipc-sharelite-perl', 'libipc-system-simple-perl', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjbig2dec0:amd64', 'libjbzip2-java', 'libjcode-pm-perl', 'libjellyfish-2.0-2:amd64', 'libjgraph-java', 'libjgrapht0.8-java', 'libjoptsimple-java', 'libjpeg-dev:amd64', 'libjpeg62-turbo:amd64', 'libjpeg62-turbo-dev:amd64', 'libjs-bootstrap', 'libjs-bootstrap4', 'libjs-bootswatch', 'libjs-d3', 'libjs-es5-shim', 'libjs-highlight.js', 'libjs-jquery', 'libjs-jquery-datatables', 'libjs-jquery-datatables-extensions', 'libjs-jquery-selectize.js', 'libjs-jquery-ui', 'libjs-json', 'libjs-lunr', 'libjs-mathjax', 'libjs-microplugin.js', 'libjs-modernizr', 'libjs-popper.js', 'libjs-prettify', 'libjs-remark-slide', 'libjs-sifter.js', 'libjs-sizzle', 'libjs-twitter-bootstrap-datepicker', 'libjs-underscore', 'libjson-c5:amd64', 'libjsoncpp25:amd64', 'libjsr305-java', 'libjxl0.9:amd64', 'libjxr-tools', 'libjxr0t64:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmlbase1t64:amd64', 'libkmldom1t64:amd64', 'libkmlengine1t64:amd64', 'libkmod2:amd64', 'libkpathsea6:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libksba8:amd64', 'liblab-gamut1:amd64', 'liblapack-dev:amd64', 'liblapack3:amd64', 'liblatex-tounicode-perl', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblightcouch-java', 'liblilv-0-0:amd64', 'liblist-allutils-perl', 'liblist-moreutils-perl', 'liblist-moreutils-xs-perl', 'liblist-someutils-perl', 'liblist-someutils-xs-perl:amd64', 'liblist-utilsby-perl', 'libllvm17t64:amd64', 'libllvm18:amd64', 'libllvmspirvlib18.1:amd64', 'liblmdb0:amd64', 'liblocale-gettext-perl', 'liblog4j2-java', 'liblqr-1-0:amd64', 'liblsan0:amd64', 'libltdl7:amd64', 'liblua5.1-0:amd64', 'liblua5.4-0:amd64', 'liblwp-mediatypes-perl', 'liblwp-protocol-https-perl', 'liblzma-dev:amd64', 'libmagic-mgc', 'libmagic1t64:amd64', 'libmagick++-6.q16-9t64:amd64', 'libmagickcore-6.q16-7-extra:amd64', 'libmagickcore-6.q16-7t64:amd64', 'libmagickwand-6.q16-7t64:amd64', 'libmailtools-perl', 'libmariadb3:amd64', 'libmath-bezier-perl', 'libmath-derivative-perl', 'libmath-random-mt-perl', 'libmath-round-perl', 'libmath-spline-perl', 'libmath-tamuanova-perl', 'libmath-vec-perl', 'libmath-vecstat-perl', 'libmbedcrypto7t64:amd64', 'libmbedtls14t64:amd64', 'libmbedx509-1t64:amd64', 'libmime-tools-perl', 'libminizip1t64:amd64', 'libmjson-java', 'libmldbm-perl', 'libmodule-implementation-perl', 'libmodule-runtime-perl', 'libmongodb-java', 'libmoo-perl', 'libmp3lame0:amd64', 'libmpc3:amd64', 'libmpfi0:amd64', 'libmpfr6:amd64', 'libmpg123-0t64:amd64', 'libmujs3:amd64', 'libmunge2:amd64', 'libmuparser2v5:amd64', 'libmysofa1:amd64', 'libnamespace-clean-perl', 'libncbi-ngs3:amd64', 'libncbi-vdb3:amd64', 'libncbi-wvdb3:amd64', 'libncbi6t64:amd64', 'libncurses-dev:amd64', 'libncurses6:amd64', 'libncursesw6:amd64', 'libnet-dbus-perl', 'libnet-http-perl', 'libnet-smtp-ssl-perl', 'libnet-ssleay-perl:amd64', 'libnetcdf19t64:amd64', 'libnetpbm11t64:amd64', 'libnghttp2-14:amd64', 'libnghttp3-9:amd64', 'libngs-java:amd64', 'libngs-jni:amd64', 'libngtcp2-16:amd64', 'libngtcp2-crypto-gnutls8:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnlopt0:amd64', 'libnode115:amd64', 'libnorm1t64:amd64', 'libnpth0t64:amd64', 'libnsl2:amd64', 'libnspr4:amd64', 'libnss-systemd:amd64', 'libnss3:amd64', 'libnuma1:amd64', 'libnumber-format-perl', 'libodbc2:amd64', 'libodbcinst2:amd64', 'libogdi4.1:amd64', 'libogg0:amd64', 'libole-storage-lite-perl', 'libopenblas0:amd64', 'libopenblas0-pthread:amd64', 'libopenexr-3-1-30:amd64', 'libopengl0:amd64', 'libopenjp2-7:amd64', 'libopenmpi3t64:amd64', 'libopenmpt0t64:amd64', 'libopus0:amd64', 'libpackage-stash-perl', 'libpackage-stash-xs-perl:amd64', 'libpam-systemd:amd64', 'libpango-1.0-0:amd64', 'libpangocairo-1.0-0:amd64', 'libpangoft2-1.0-0:amd64', 'libpaper-utils', 'libpaper1:amd64', 'libparams-classify-perl:amd64', 'libparams-validate-perl:amd64', 'libparse-recdescent-perl', 'libpathplan4:amd64', 'libpciaccess0:amd64', 'libpcre2-16-0:amd64', 'libpcre2-32-0:amd64', 'libpcre2-dev:amd64', 'libpcre2-posix3:amd64', 'libpcsclite1:amd64', 'libperl4-corelibs-perl', 'libperl5.38t64:amd64', 'libpgm-5.3-0t64:amd64', 'libpicard-java', 'libpixman-1-0:amd64', 'libpkgconf3:amd64', 'libplacebo349:amd64', 'libpmix2t64:amd64', 'libpng-dev:amd64', 'libpng-tools', 'libpng16-16t64:amd64', 'libpocketsphinx3:amd64', 'libpod-coverage-perl', 'libpod-parser-perl', 'libpoppler-cpp1:amd64', 'libpoppler140:amd64', 'libpostproc58:amd64', 'libpostscript-perl', 'libpotrace0:amd64', 'libpq5:amd64', 'libproc2-0:amd64', 'libproj25:amd64', 'libpsl5t64:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'libptexenc1:amd64', 'libpulse0:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libqhull-r8.0:amd64', 'libqpdf29t64:amd64', 'libquadmath0:amd64', 'librabbitmq4:amd64', 'libraqm0:amd64', 'librav1e0.7:amd64', 'libraw23t64:amd64', 'librdmacm1t64:amd64', 'libre2-11:amd64', 'libreadline-dev:amd64', 'libreadline8t64:amd64', 'libreadonly-perl', 'libref-util-perl', 'libref-util-xs-perl', 'libregexp-common-perl', 'librhino-java', 'librist4:amd64', 'librole-tiny-perl', 'librsvg2-2:amd64', 'librsvg2-common:amd64', 'librtmp1:amd64', 'librttopo1:amd64', 'librubberband2:amd64', 'libruby:amd64', 'libruby3.1t64:amd64', 'libsamplerate0:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsensors-config', 'libsensors5:amd64', 'libserd-0-0:amd64', 'libset-intspan-perl', 'libset-object-perl', 'libset-scalar-perl', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libshine3:amd64', 'libsigsegv2:amd64', 'libslf4j-java', 'libsm6:amd64', 'libsnappy-java', 'libsnappy-jni', 'libsnappy1v5:amd64', 'libsndfile1:amd64', 'libsoap-lite-perl', 'libsodium23:amd64', 'libsord-0-0:amd64', 'libsort-naturally-perl', 'libsoxr0:amd64', 'libspatialite8t64:amd64', 'libspeex1:amd64', 'libsphinxbase3t64:amd64', 'libspiffy-perl', 'libspreadsheet-parseexcel-perl', 'libspreadsheet-writeexcel-perl', 'libsprng2', 'libsqlite3-0:amd64', 'libsquid1t64:amd64', 'libsquizz', 'libsratom-0-0:amd64', 'libsrt1.5-gnutls:amd64', 'libssh-4:amd64', 'libssh2-1t64:amd64', 'libstaden-read14t64:amd64', 'libstatistics-basic-perl', 'libstatistics-descriptive-perl', 'libstdc++-14-dev:amd64', 'libsub-exporter-progressive-perl', 'libsub-identify-perl', 'libsub-name-perl:amd64', 'libsub-quote-perl', 'libsub-uplevel-perl', 'libsuitesparseconfig7:amd64', 'libsuperlu6:amd64', 'libsvg-graph-perl', 'libsvg-perl', 'libsvtav1enc2:amd64', 'libswresample5:amd64', 'libswscale8:amd64', 'libsynctex2:amd64', 'libsystemd-shared:amd64', 'libsz2:amd64', 'libtamuanova-0.2', 'libtask-weaken-perl', 'libtbb-dev:amd64', 'libtbb12:amd64', 'libtbbbind-2-5:amd64', 'libtbbmalloc2:amd64', 'libtcl8.6:amd64', 'libteckit0:amd64', 'libtest-deep-perl', 'libtest-differences-perl', 'libtest-exception-perl', 'libtest-most-perl', 'libtest-pod-perl', 'libtest-requiresinternet-perl', 'libtest-warn-perl', 'libtexlua53-5:amd64', 'libtext-csv-perl', 'libtext-csv-xs-perl:amd64', 'libtext-diff-perl', 'libtext-format-perl', 'libtext-iconv-perl:amd64', 'libthai-data', 'libthai0:amd64', 'libtheora0:amd64', 'libtie-ixhash-perl', 'libtiff6:amd64', 'libtimedate-perl', 'libtirpc-common', 'libtirpc-dev:amd64', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtre5:amd64', 'libtree-dagnode-perl', 'libtry-tiny-perl', 'libtsan2:amd64', 'libtwolame0:amd64', 'libtype-tiny-perl', 'libtype-tiny-xs-perl:amd64', 'libubsan1:amd64', 'libucx0:amd64', 'libudfread0:amd64', 'libunibreak6:amd64', 'libunicode-map-perl', 'libunwind8:amd64', 'liburi-perl', 'liburiparser1:amd64', 'libuv1t64:amd64', 'libva-drm2:amd64', 'libva-x11-2:amd64', 'libva2:amd64', 'libvariable-magic-perl', 'libvdpau-va-gl1:amd64', 'libvdpau1:amd64', 'libvidstab1.1:amd64', 'libvorbis0a:amd64', 'libvorbisenc2:amd64', 'libvorbisfile3:amd64', 'libvpl2', 'libvpx9:amd64', 'libvulkan1:amd64', 'libwayland-client0:amd64', 'libwayland-cursor0:amd64', 'libwayland-egl1:amd64', 'libwayland-server0:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libwmflite-0.2-7:amd64', 'libwoff1:amd64', 'libwww-perl', 'libwww-robotrules-perl', 'libx11-6:amd64', 'libx11-data', 'libx11-protocol-perl', 'libx11-xcb1:amd64', 'libx264-164:amd64', 'libx265-209:amd64', 'libxau6:amd64', 'libxaw7:amd64', 'libxcb-dri2-0:amd64', 'libxcb-dri3-0:amd64', 'libxcb-glx0:amd64', 'libxcb-present0:amd64', 'libxcb-randr0:amd64', 'libxcb-render0:amd64', 'libxcb-shape0:amd64', 'libxcb-shm0:amd64', 'libxcb-sync1:amd64', 'libxcb-xfixes0:amd64', 'libxcb1:amd64', 'libxcomposite1:amd64', 'libxcursor1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxerces-c3.2t64:amd64', 'libxext6:amd64', 'libxfixes3:amd64', 'libxft2:amd64', 'libxi6:amd64', 'libxinerama1:amd64', 'libxkbcommon0:amd64', 'libxkbfile1:amd64', 'libxml-dom-perl', 'libxml-dom-xpath-perl', 'libxml-filter-buffertext-perl', 'libxml-libxml-perl', 'libxml-libxslt-perl:amd64', 'libxml-namespacesupport-perl', 'libxml-parser-perl', 'libxml-perl', 'libxml-regexp-perl', 'libxml-sax-base-perl', 'libxml-sax-expat-perl', 'libxml-sax-perl', 'libxml-sax-writer-perl', 'libxml-simple-perl', 'libxml-twig-perl', 'libxml-writer-perl', 'libxml-xpath-perl', 'libxml-xpathengine-perl', 'libxml2:amd64', 'libxmlrpc-lite-perl', 'libxmu6:amd64', 'libxmuu1:amd64', 'libxnvctrl0:amd64', 'libxpm4:amd64', 'libxrandr2:amd64', 'libxrender1:amd64', 'libxshmfence1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'libxstring-perl:amd64', 'libxt6t64:amd64', 'libxtst6:amd64', 'libxv1:amd64', 'libxvidcore4:amd64', 'libxxf86dga1:amd64', 'libxxf86vm1:amd64', 'libyaml-0-2:amd64', 'libyaml-libyaml-perl', 'libyaml-perl', 'libyuv0:amd64', 'libz3-4:amd64', 'libzimg2:amd64', 'libzix-0-0:amd64', 'libzmq5:amd64', 'libzvbi-common', 'libzvbi0t64:amd64', 'libzzip-0-13t64:amd64', 'linux-libc-dev', 'linux-sysctl-defaults', 'littler', 'lmodern', 'loki', 'lua-filesystem:amd64', 'lua-lpeg:amd64', 'lua-md5:amd64', 'luit', 'lynx', 'lynx-common', 'macs', 'mafft', 'mailcap', 'make', 'manpages', 'manpages-dev', 'mapsembler2', 'maq', 'mariadb-common', 'med-config', 'med-tasks', 'media-types', 'melting', 'menu', 'mesa-libgallium:amd64', 'mesa-opencl-icd:amd64', 'mesa-va-drivers:amd64', 'mesa-vdpau-drivers:amd64', 'mesa-vulkan-drivers:amd64', 'minia', 'mipe', 'mira-assembler', 'mira-rfam-12s-rrna', 'mlv-smile', 'mothur', 'mpi-default-bin', 'mrbayes', 'mummer', 'mupdf-tools', 'muscle', 'mustang', 'mysql-common', 'ncbi-blast+', 'ncbi-blast+-legacy', 'ncbi-data', 'ncbi-epcr', 'ncbi-tools-bin', 'ncbi-vdb-data', 'ncoils', 'neobio', 'netbase', 'netpbm', 'node-acorn', 'node-balanced-match', 'node-bootstrap-sass', 'node-brace-expansion', 'node-cjs-module-lexer', 'node-highlight.js', 'node-html5shiv', 'node-jquery', 'node-jquery-ui', 'node-minimatch', 'node-normalize.css', 'node-undici', 'node-xtend', 'nodejs', 'nodejs-doc', 'ocl-icd-libopencl1:amd64', 'openjdk-21-jdk-headless:amd64', 'openjdk-21-jre:amd64', 'openjdk-21-jre-headless:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssl', 'pal2nal', 'paml', 'pandoc', 'pandoc-data', 'paraclu', 'parallel', 'parsinsert', 'patch', 'pdb2pqr', 'perl', 'perl-doc', 'perl-modules-5.38', 'perl-openssl-defaults:amd64', 'perl-tk', 'perm', 'phylip', 'phyml', 'phyutility', 'picard-tools', 'pinentry-curses', 'pkgconf:amd64', 'pkgconf-bin', 'plink', 'plink1.9', 'plink2', 'poa', 'pocketsphinx-en-us', 'poppler-data', 'prank', 'prime-phylo', 'primer3', 'probabel', 'probalign', 'probcons', 'procps', 'proda', 'prodigal', 'proj-bin', 'proj-data', 'psmisc', 'publicsuffix', 'python-babel-localedata', 'python-biopython-doc', 'python-matplotlib-data', 'python3', 'python3-appdirs', 'python3-argcomplete', 'python3-argh', 'python3-attr', 'python3-autocommand', 'python3-babel', 'python3-biomaj3-cli', 'python3-biomaj3-core', 'python3-biopython', 'python3-brotli', 'python3-bs4', 'python3-cairo', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-charset-normalizer', 'python3-contourpy', 'python3-cssselect', 'python3-cycler', 'python3-cykhash', 'python3-dateutil', 'python3-decorator', 'python3-docutils', 'python3-elasticsearch', 'python3-fonttools', 'python3-freetype', 'python3-fs', 'python3-gffutils', 'python3-hisat2', 'python3-hmmlearn', 'python3-html5lib', 'python3-htseq', 'python3-idna', 'python3-importlib-metadata', 'python3-inflect', 'python3-iniconfig', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jinja2', 'python3-joblib', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-markupsafe', 'python3-matplotlib', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-numpy', 'python3-olefile', 'python3-packaging', 'python3-pdb2pqr', 'python3-pdbx', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-pluggy', 'python3-propka', 'python3-psutil', 'python3-pybedtools', 'python3-pyfaidx', 'python3-pygments', 'python3-pyparsing', 'python3-pysam', 'python3-pytest', 'python3-reportlab', 'python3-requests', 'python3-rlpycairo', 'python3-roman', 'python3-rpy2', 'python3-scipy', 'python3-simplejson', 'python3-six', 'python3-sklearn', 'python3-sklearn-lib:amd64', 'python3-soupsieve', 'python3-sympy', 'python3-threadpoolctl', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-tzlocal', 'python3-ufolib2', 'python3-unicodedata2', 'python3-urllib3', 'python3-webencodings', 'python3-zipp', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'r-base-core', 'r-base-dev', 'r-bioc-biobase', 'r-bioc-biocgenerics', 'r-bioc-biocstyle', 'r-bioc-biocversion', 'r-bioc-edger', 'r-bioc-graph', 'r-bioc-hilbertvis', 'r-bioc-limma', 'r-cran-abind', 'r-cran-acepack', 'r-cran-actuar', 'r-cran-admisc', 'r-cran-aer', 'r-cran-afex', 'r-cran-amelia', 'r-cran-ape', 'r-cran-arm', 'r-cran-askpass', 'r-cran-av', 'r-cran-backports', 'r-cran-base64enc', 'r-cran-base64url', 'r-cran-batchjobs', 'r-cran-batchtools', 'r-cran-bayesfactor', 'r-cran-bayesplot', 'r-cran-bbmisc', 'r-cran-bbmle', 'r-cran-bdsmatrix', 'r-cran-beeswarm', 'r-cran-bench', 'r-cran-bh', 'r-cran-biasedurn', 'r-cran-biocmanager', 'r-cran-bit', 'r-cran-bit64', 'r-cran-bitops', 'r-cran-blme', 'r-cran-blob', 'r-cran-bookdown', 'r-cran-boot', 'r-cran-brew', 'r-cran-brglm2', 'r-cran-bridgesampling', 'r-cran-brio', 'r-cran-brms', 'r-cran-brobdingnag', 'r-cran-broom', 'r-cran-broom.helpers', 'r-cran-broom.mixed', 'r-cran-bslib', 'r-cran-ca', 'r-cran-cachem', 'r-cran-cairo', 'r-cran-callr', 'r-cran-car', 'r-cran-cardata', 'r-cran-caret', 'r-cran-catools', 'r-cran-cba', 'r-cran-cellranger', 'r-cran-checkmate', 'r-cran-chk', 'r-cran-chron', 'r-cran-class', 'r-cran-cli', 'r-cran-clipr', 'r-cran-clock', 'r-cran-clubsandwich', 'r-cran-cluster', 'r-cran-cmprsk', 'r-cran-coda', 'r-cran-codetools', 'r-cran-coin', 'r-cran-collapse', 'r-cran-colorspace', 'r-cran-colourpicker', 'r-cran-commonmark', 'r-cran-conflicted', 'r-cran-conquer', 'r-cran-contfrac', 'r-cran-corrplot', 'r-cran-covr', 'r-cran-cowplot', 'r-cran-cpp11', 'r-cran-crayon', 'r-cran-credentials', 'r-cran-crosstalk', 'r-cran-curl', 'r-cran-cvar', 'r-cran-cvst', 'r-cran-cyclocomp', 'r-cran-data.table', 'r-cran-datawizard', 'r-cran-date', 'r-cran-dbi', 'r-cran-dbitest', 'r-cran-dbplyr', 'r-cran-dbscan', 'r-cran-ddalpha', 'r-cran-decor', 'r-cran-deldir', 'r-cran-dendextend', 'r-cran-deoptimr', 'r-cran-deriv', 'r-cran-desc', 'r-cran-desolve', 'r-cran-devtools', 'r-cran-dfoptim', 'r-cran-diagram', 'r-cran-dials', 'r-cran-dicedesign', 'r-cran-dichromat', 'r-cran-diffobj', 'r-cran-digest', 'r-cran-dimred', 'r-cran-diptest', 'r-cran-distributional', 'r-cran-doby', 'r-cran-docopt', 'r-cran-domc', 'r-cran-doparallel', 'r-cran-dorng', 'r-cran-dotcall64', 'r-cran-downlit', 'r-cran-dplyr', 'r-cran-drr', 'r-cran-dt', 'r-cran-dtplyr', 'r-cran-dygraphs', 'r-cran-dynlm', 'r-cran-e1071', 'r-cran-eaf', 'r-cran-earth', 'r-cran-effects', 'r-cran-ellipse', 'r-cran-ellipsis', 'r-cran-elliptic', 'r-cran-emdbook', 'r-cran-emmeans', 'r-cran-emoa', 'r-cran-energy', 'r-cran-enrichwith', 'r-cran-epi', 'r-cran-estimability', 'r-cran-etm', 'r-cran-evaluate', 'r-cran-evd', 'r-cran-expint', 'r-cran-expm', 'r-cran-extradistr', 'r-cran-fansi', 'r-cran-farver', 'r-cran-fastica', 'r-cran-fastmap', 'r-cran-fastmatch', 'r-cran-fbasics', 'r-cran-fgarch', 'r-cran-fields', 'r-cran-filehash', 'r-cran-fit.models', 'r-cran-flexmix', 'r-cran-fnn', 'r-cran-fontawesome', 'r-cran-fontbitstreamvera', 'r-cran-fontliberation', 'r-cran-fontquiver', 'r-cran-forcats', 'r-cran-foreach', 'r-cran-forecast', 'r-cran-foreign', 'r-cran-formatr', 'r-cran-formattable', 'r-cran-formula', 'r-cran-fpc', 'r-cran-fracdiff', 'r-cran-fs', 'r-cran-furrr', 'r-cran-futile.logger', 'r-cran-futile.options', 'r-cran-future', 'r-cran-future.apply', 'r-cran-g.data', 'r-cran-gam', 'r-cran-gamm4', 'r-cran-gargle', 'r-cran-gbrd', 'r-cran-gbutils', 'r-cran-gclus', 'r-cran-gdata', 'r-cran-gee', 'r-cran-geepack', 'r-cran-generics', 'r-cran-geometry', 'r-cran-geosphere', 'r-cran-gert', 'r-cran-ggally', 'r-cran-gganimate', 'r-cran-ggbeeswarm', 'r-cran-ggeffects', 'r-cran-ggforce', 'r-cran-ggfortify', 'r-cran-ggplot2', 'r-cran-ggpubr', 'r-cran-ggrepel', 'r-cran-ggridges', 'r-cran-ggsci', 'r-cran-ggsignif', 'r-cran-ggstats', 'r-cran-gh', 'r-cran-git2r', 'r-cran-gitcreds', 'r-cran-glmnet', 'r-cran-globals', 'r-cran-glue', 'r-cran-gmm', 'r-cran-gmp', 'r-cran-googledrive', 'r-cran-googlesheets4', 'r-cran-gower', 'r-cran-gparotation', 'r-cran-gplots', 'r-cran-gridbase', 'r-cran-gridextra', 'r-cran-gridgraphics', 'r-cran-gridsvg', 'r-cran-gsl', 'r-cran-gss', 'r-cran-gtable', 'r-cran-gtools', 'r-cran-hardhat', 'r-cran-haven', 'r-cran-here', 'r-cran-hexbin', 'r-cran-highr', 'r-cran-hmisc', 'r-cran-hms', 'r-cran-hsaur3', 'r-cran-htmltable', 'r-cran-htmltools', 'r-cran-htmlwidgets', 'r-cran-httptest2', 'r-cran-httpuv', 'r-cran-httr', 'r-cran-httr2', 'r-cran-hunspell', 'r-cran-hypergeo', 'r-cran-ids', 'r-cran-igraph', 'r-cran-ini', 'r-cran-inline', 'r-cran-insight', 'r-cran-intergraph', 'r-cran-interp', 'r-cran-inum', 'r-cran-ipred', 'r-cran-irace', 'r-cran-irdisplay', 'r-cran-irlba', 'r-cran-isoband', 'r-cran-iterators', 'r-cran-itertools', 'r-cran-janeaustenr', 'r-cran-jomo', 'r-cran-jpeg', 'r-cran-jquerylib', 'r-cran-jsonlite', 'r-cran-kableextra', 'r-cran-kernlab', 'r-cran-kernsmooth', 'r-cran-kmi', 'r-cran-knitr', 'r-cran-ks', 'r-cran-labeling', 'r-cran-labelled', 'r-cran-lambda.r', 'r-cran-later', 'r-cran-lattice', 'r-cran-latticeextra', 'r-cran-lava', 'r-cran-lavaan', 'r-cran-lavasearch2', 'r-cran-lazyeval', 'r-cran-lbfgsb3c', 'r-cran-leaps', 'r-cran-lhs', 'r-cran-libcoin', 'r-cran-lifecycle', 'r-cran-linprog', 'r-cran-lintr', 'r-cran-listenv', 'r-cran-littler', 'r-cran-lme4', 'r-cran-lmertest', 'r-cran-lmtest', 'r-cran-lobstr', 'r-cran-locfit', 'r-cran-logcondens', 'r-cran-logspline', 'r-cran-loo', 'r-cran-lpsolve', 'r-cran-lsmeans', 'r-cran-lubridate', 'r-cran-magic', 'r-cran-magick', 'r-cran-magrittr', 'r-cran-mapdata', 'r-cran-mapproj', 'r-cran-maps', 'r-cran-marginaleffects', 'r-cran-markdown', 'r-cran-mass', 'r-cran-matchit', 'r-cran-mathjaxr', 'r-cran-matrix', 'r-cran-matrixmodels', 'r-cran-matrixstats', 'r-cran-maxlik', 'r-cran-mclogit', 'r-cran-mclust', 'r-cran-mda', 'r-cran-memisc', 'r-cran-memoise', 'r-cran-metadat', 'r-cran-metafor', 'r-cran-mets', 'r-cran-mgcv', 'r-cran-mice', 'r-cran-microbenchmark', 'r-cran-mime', 'r-cran-miniui', 'r-cran-minqa', 'r-cran-misctools', 'r-cran-mitml', 'r-cran-mitools', 'r-cran-mlbench', 'r-cran-mlmetrics', 'r-cran-mlmrev', 'r-cran-mlr', 'r-cran-mnormt', 'r-cran-mockery', 'r-cran-modeldata', 'r-cran-modelmetrics', 'r-cran-modelr', 'r-cran-modeltools', 'r-cran-msm', 'r-cran-multcomp', 'r-cran-multcompview', 'r-cran-multicool', 'r-cran-munsell', 'r-cran-mvtnorm', 'r-cran-nanoarrow', 'r-cran-ncdf4', 'r-cran-network', 'r-cran-nleqslv', 'r-cran-nlme', 'r-cran-nloptr', 'r-cran-nmf', 'r-cran-nnet', 'r-cran-nnls', 'r-cran-numderiv', 'r-cran-openssl', 'r-cran-openxlsx', 'r-cran-optimparallel', 'r-cran-optimx', 'r-cran-ordinal', 'r-cran-packrat', 'r-cran-palmerpenguins', 'r-cran-pammtools', 'r-cran-pan', 'r-cran-pander', 'r-cran-parallelly', 'r-cran-parallelmap', 'r-cran-paramhelpers', 'r-cran-party', 'r-cran-partykit', 'r-cran-patchwork', 'r-cran-patrick', 'r-cran-pbapply', 'r-cran-pbivnorm', 'r-cran-pbkrtest', 'r-cran-pbmcapply', 'r-cran-pcapp', 'r-cran-pdftools', 'r-cran-pec', 'r-cran-permute', 'r-cran-phangorn', 'r-cran-pillar', 'r-cran-pingr', 'r-cran-pkgbuild', 'r-cran-pkgconfig', 'r-cran-pkgdown', 'r-cran-pkgkitten', 'r-cran-pkgload', 'r-cran-pki', 'r-cran-plm', 'r-cran-plogr', 'r-cran-plotmo', 'r-cran-plotrix', 'r-cran-plumber', 'r-cran-plyr', 'r-cran-png', 'r-cran-polspline', 'r-cran-polyclip', 'r-cran-polycor', 'r-cran-polynom', 'r-cran-poorman', 'r-cran-popepi', 'r-cran-posterior', 'r-cran-prabclus', 'r-cran-pracma', 'r-cran-praise', 'r-cran-prettyunits', 'r-cran-proc', 'r-cran-processx', 'r-cran-prodlim', 'r-cran-profmem', 'r-cran-profvis', 'r-cran-progress', 'r-cran-progressr', 'r-cran-projpred', 'r-cran-promises', 'r-cran-proxy', 'r-cran-ps', 'r-cran-pscl', 'r-cran-psych', 'r-cran-psychtools', 'r-cran-publish', 'r-cran-purrr', 'r-cran-purrrlyr', 'r-cran-pvclust', 'r-cran-qap', 'r-cran-qpdf', 'r-cran-qtl', 'r-cran-quadprog', 'r-cran-quantmod', 'r-cran-quantreg', 'r-cran-quickjsr', 'r-cran-r.cache', 'r-cran-r.devices', 'r-cran-r.methodss3', 'r-cran-r.oo', 'r-cran-r.rsp', 'r-cran-r.utils', 'r-cran-r6', 'r-cran-ragg', 'r-cran-randomforest', 'r-cran-ranger', 'r-cran-rann', 'r-cran-rappdirs', 'r-cran-raster', 'r-cran-rbibutils', 'r-cran-rcmdcheck', 'r-cran-rcolorbrewer', 'r-cran-rcpp', 'r-cran-rcpparmadillo', 'r-cran-rcppeigen', 'r-cran-rcppml', 'r-cran-rcppparallel', 'r-cran-rcppprogress', 'r-cran-rcpproll', 'r-cran-rcpptoml', 'r-cran-rcsdp', 'r-cran-rcurl', 'r-cran-rdpack', 'r-cran-readr', 'r-cran-readxl', 'r-cran-recipes', 'r-cran-registry', 'r-cran-relsurv', 'r-cran-rematch', 'r-cran-rematch2', 'r-cran-remotes', 'r-cran-renv', 'r-cran-repr', 'r-cran-reprex', 'r-cran-reshape', 'r-cran-reshape2', 'r-cran-reticulate', 'r-cran-rex', 'r-cran-rgl', 'r-cran-rhpcblasctl', 'r-cran-rio', 'r-cran-riskregression', 'r-cran-rlang', 'r-cran-rmarkdown', 'r-cran-rmpfr', 'r-cran-rmpi', 'r-cran-rms', 'r-cran-rmysql', 'r-cran-rngtools', 'r-cran-robumeta', 'r-cran-robust', 'r-cran-robustbase', 'r-cran-rocr', 'r-cran-rose', 'r-cran-roxygen2', 'r-cran-rpart', 'r-cran-rpostgresql', 'r-cran-rprojroot', 'r-cran-rrcov', 'r-cran-rsample', 'r-cran-rsconnect', 'r-cran-rsolnp', 'r-cran-rspectra', 'r-cran-rsqlite', 'r-cran-rstan', 'r-cran-rstanarm', 'r-cran-rstantools', 'r-cran-rstatix', 'r-cran-rstudioapi', 'r-cran-rsvg', 'r-cran-rtdists', 'r-cran-rtsne', 'r-cran-runit', 'r-cran-rversions', 'r-cran-rvest', 'r-cran-rwiener', 'r-cran-sandwich', 'r-cran-sass', 'r-cran-scales', 'r-cran-scatterplot3d', 'r-cran-selectr', 'r-cran-sendmailr', 'r-cran-seriation', 'r-cran-sessioninfo', 'r-cran-setrng', 'r-cran-sfsmisc', 'r-cran-shape', 'r-cran-shiny', 'r-cran-shinyjs', 'r-cran-shinystan', 'r-cran-shinythemes', 'r-cran-sjlabelled', 'r-cran-slider', 'r-cran-sm', 'r-cran-smcfcs', 'r-cran-sna', 'r-cran-snakecase', 'r-cran-sodium', 'r-cran-sourcetools', 'r-cran-sp', 'r-cran-spam', 'r-cran-sparsem', 'r-cran-spatial', 'r-cran-spelling', 'r-cran-splines2', 'r-cran-squarem', 'r-cran-stabledist', 'r-cran-stanheaders', 'r-cran-statmod', 'r-cran-statnet.common', 'r-cran-stringi', 'r-cran-stringr', 'r-cran-strucchange', 'r-cran-survey', 'r-cran-survival', 'r-cran-svglite', 'r-cran-swagger', 'r-cran-sys', 'r-cran-systemfit', 'r-cran-systemfonts', 'r-cran-tensora', 'r-cran-terra', 'r-cran-testit', 'r-cran-testthat', 'r-cran-textshaping', 'r-cran-th.data', 'r-cran-thematic', 'r-cran-themis', 'r-cran-threejs', 'r-cran-tibble', 'r-cran-tidyr', 'r-cran-tidyselect', 'r-cran-tidyverse', 'r-cran-tikzdevice', 'r-cran-timechange', 'r-cran-timedate', 'r-cran-timereg', 'r-cran-timeseries', 'r-cran-tinytest', 'r-cran-tinytex', 'r-cran-truncdist', 'r-cran-truncnorm', 'r-cran-tseries', 'r-cran-tsp', 'r-cran-ttr', 'r-cran-tufte', 'r-cran-tweenr', 'r-cran-tzdb', 'r-cran-ucminf', 'r-cran-unitizer', 'r-cran-urca', 'r-cran-urlchecker', 'r-cran-uroot', 'r-cran-usethis', 'r-cran-utf8', 'r-cran-uuid', 'r-cran-v8', 'r-cran-vcd', 'r-cran-vctrs', 'r-cran-vdiffr', 'r-cran-vegan', 'r-cran-venndiagram', 'r-cran-vgam', 'r-cran-vioplot', 'r-cran-vipor', 'r-cran-viridis', 'r-cran-viridislite', 'r-cran-vroom', 'r-cran-waldo', 'r-cran-warp', 'r-cran-webfakes', 'r-cran-webshot', 'r-cran-webutils', 'r-cran-whisker', 'r-cran-whoami', 'r-cran-withr', 'r-cran-writexl', 'r-cran-xfun', 'r-cran-xml', 'r-cran-xml2', 'r-cran-xmlparsedata', 'r-cran-xopen', 'r-cran-xtable', 'r-cran-xts', 'r-cran-yaml', 'r-cran-zeallot', 'r-cran-zip', 'r-cran-zoo', 'r-doc-html', 'r-other-mott-happy.hbrem', 'r-recommended', 'rake', 'raster3d', 'raxml', 'readline-common', 'readseq', 'rnahybrid', 'rpcsvc-proto', 'rtax', 'ruby', 'ruby-net-telnet', 'ruby-rubygems', 'ruby-sdbm:amd64', 'ruby-webrick', 'ruby-xmlrpc', 'ruby3.1', 'rubygems-integration', 'samtools', 'sensible-utils', 'seqan-apps', 'sgml-base', 'shared-mime-info', 'sibsim4', 'sigma-align', 'sim4', 'smalt', 'snap', 'soapdenovo', 'soapdenovo2', 'squizz', 'sra-toolkit', 'ssake', 'sse4.2-support', 'staden-io-lib-utils', 'sysstat', 'systemd', 'systemd-cryptsetup', 'systemd-sysv', 'systemd-timesyncd', 't-coffee', 't1utils', 'tabix', 'tasksel', 'tasksel-data', 'tcl', 'tcl8.6', 'tex-common', 'texlive-base', 'texlive-bibtex-extra', 'texlive-binaries', 'texlive-latex-base', 'theseus', 'tigr-glimmer', 'tk8.6-blt2.5', 'tm-align', 'tree-puzzle', 'tree-puzzle-doc', 'ttf-bitstream-vera', 'ucf', 'unicode-data', 'unixodbc-common', 'unzip', 'va-driver-all:amd64', 'vcftools', 'vdpau-driver-all:amd64', 'velvet', 'w3c-sgml-lib', 'wise', 'wise-data', 'x11-common', 'x11-utils', 'x11-xserver-utils', 'xauth', 'xdg-user-dirs', 'xdg-utils', 'xfonts-encodings', 'xfonts-utils', 'xkb-data', 'xml-core', 'xz-utils', 'zip', 'zlib1g-dev:amd64', 'zutty'] 14m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg', '--purge', 'med-cloud'] 14m16.7s DUMP: dpkg: warning: ignoring request to remove med-cloud which isn't installed 14m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg', '--purge', 'med-cloud'] 14m16.7s INFO: Running scripts post_purge 14m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_purge_exceptions'] 14m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_purge_exceptions'] 14m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg', '--purge', '--pending'] 14m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg', '--purge', '--pending'] 14m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg', '--remove', '--pending'] 14m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg', '--remove', '--pending'] 14m16.7s INFO: Running scripts post_test 14m16.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_test_exceptions'] 14m16.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'tmp/scripts/post_test_exceptions'] 14m16.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 14m17.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 14m17.7s ERROR: WARN: Broken symlinks: /etc/vconsole.conf -> default/keyboard /etc/fonts/conf.d/70-no-bitmaps-except-emoji.conf -> /usr/share/fontconfig/conf.avail/70-no-bitmaps-except-emoji.conf /etc/default/locale -> ../locale.conf /usr/lib/x86_64-linux-gnu/libmpi_usempi_ignore_tkr-gfortranso.40 -> libmpi_usempi_ignore_tkr-gfortran.so.40.30.0 14m17.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg-divert', '--list'] 14m17.7s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 14m17.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'dpkg-divert', '--list'] 14m17.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', 'clean'] 14m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp6t90phv8', 'apt-get', 'clean'] 14m18.1s DEBUG: Recording chroot state 14m18.6s INFO: Warning: Package purging left files on system: /etc/default/locale -> ../locale.conf not owned /etc/fonts/ owned by: fonts-noto-mono, fonts-lmodern, fontconfig-config, fonts-urw-base35, fonts-dejavu-core, fonts-dejavu-mono, fonts-droid-fallback /etc/fonts/conf.d/ owned by: fonts-lmodern, fontconfig-config, fonts-urw-base35, fonts-dejavu-core, fonts-dejavu-mono /etc/fonts/conf.d/70-no-bitmaps-except-emoji.conf -> /usr/share/fontconfig/conf.avail/70-no-bitmaps-except-emoji.conf not owned /etc/vconsole.conf -> default/keyboard not owned /root/.ssh/ not owned /usr/lib/x86_64-linux-gnu/libmpi_usempi_ignore_tkr-gfortranso.40 -> libmpi_usempi_ignore_tkr-gfortran.so.40.30.0 not owned /var/cache/private/ not owned /var/lib/private/ not owned /var/lib/systemd/coredump/ not owned /var/lib/systemd/ephemeral-trees/ not owned /var/lib/systemd/network/ not owned /var/lib/systemd/pstore/ not owned /var/log/private/ not owned 14m18.7s INFO: PASS: Installation and purging test. 14m19.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/shm'] 14m19.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/shm'] 14m19.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/console'] 14m19.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/console'] 14m19.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/ptmx'] 14m19.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/ptmx'] 14m19.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/pts'] 14m19.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/dev/pts'] 14m19.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/proc'] 14m19.3s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp6t90phv8/proc'] 14m19.3s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 14m19.4s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp6t90phv8'] 14m19.4s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp6t90phv8 14m19.4s INFO: PASS: All tests. 14m19.4s INFO: piuparts run ends. ret=0 End: 2024-09-26 17:38:39 GMT