Start: 2024-04-24 16:36:57 GMT Package: mrbayes-mpi Source: mrbayes (3.2.7a-7) Version: 3.2.7a-7+b1 Installed-Size: 1620 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.34), libhmsbeagle1v5 (>= 3.1.2+dfsg), libreadline8t64 (>= 6.0), mpi-default-bin, ssh Suggests: mpi-default, mrbayes-doc Description: Bayesian Inference of Phylogeny - mpi version Homepage: http://mrbayes.csit.fsu.edu/ Description-md5: d4667b242cc8f99f098ff96397619072 Section: science Priority: optional Filename: pool/main/m/mrbayes/mrbayes-mpi_3.2.7a-7+b1_amd64.deb Size: 598092 MD5sum: e70c878c02e125a0e1d930dc9003c45c SHA256: e1140bd0ed13a75e9e76583c08824108b51723dd25f1ebf41efeeb75c117996a Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt mrbayes-mpi=3.2.7a-7+b1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.1~202403190841~1.4-4-g85045c69 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt mrbayes-mpi=3.2.7a-7+b1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-28-amd64 #1 SMP Debian 5.10.209-2 (2024-01-31) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpgbejxbz7 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpgbejxbz7 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/pts'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/pts'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/ptmx'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/ptmx'] 0m0.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/console'] 0m0.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/console'] 0m0.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/shm'] 0m0.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/shm'] 0m0.4s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.4s DEBUG: Created policy-rc.d and chmodded it. 0m0.4s DEBUG: Created resolv.conf. 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpgbejxbz7/tmp/scripts/ 0m0.4s INFO: Running scripts post_chroot_unpack 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', 'update'] 0m3.6s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [158 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [8870 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [5999 kB] Fetched 15.0 MB in 2s (6602 kB/s) Reading package lists... 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', 'update'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', '-yf', 'dist-upgrade'] 0m6.8s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... The following packages will be upgraded: base-files dpkg gcc-14-base libc-bin libc6 libcap-ng0 libgcc-s1 libstdc++6 libtinfo6 ncurses-base ncurses-bin 11 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 6832 kB of archives. After this operation, 8192 B of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 base-files amd64 13.1 [70.8 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 dpkg amd64 1.22.6 [1510 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 ncurses-bin amd64 6.4+20240414-1 [433 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 gcc-14-base amd64 14-20240330-1 [43.2 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libgcc-s1 amd64 14-20240330-1 [71.9 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 libstdc++6 amd64 14-20240330-1 [713 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 libc6 amd64 2.37-18 [2757 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libc-bin amd64 2.37-18 [603 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 ncurses-base all 6.4+20240414-1 [269 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libcap-ng0 amd64 0.8.5-1 [17.1 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 libtinfo6 amd64 6.4+20240414-1 [344 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 6832 kB in 0s (66.0 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../base-files_13.1_amd64.deb ... Unpacking base-files (13.1) over (13) ... Setting up base-files (13.1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../archives/dpkg_1.22.6_amd64.deb ... Unpacking dpkg (1.22.6) over (1.22.4) ... Setting up dpkg (1.22.6) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../ncurses-bin_6.4+20240414-1_amd64.deb ... Unpacking ncurses-bin (6.4+20240414-1) over (6.4+20240113-1) ... Setting up ncurses-bin (6.4+20240414-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../gcc-14-base_14-20240330-1_amd64.deb ... Unpacking gcc-14-base:amd64 (14-20240330-1) over (14-20240201-3) ... Setting up gcc-14-base:amd64 (14-20240330-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../libgcc-s1_14-20240330-1_amd64.deb ... Unpacking libgcc-s1:amd64 (14-20240330-1) over (14-20240201-3) ... Setting up libgcc-s1:amd64 (14-20240330-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../libstdc++6_14-20240330-1_amd64.deb ... Unpacking libstdc++6:amd64 (14-20240330-1) over (14-20240201-3) ... Setting up libstdc++6:amd64 (14-20240330-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../libc6_2.37-18_amd64.deb ... Unpacking libc6:amd64 (2.37-18) over (2.37-15) ... Setting up libc6:amd64 (2.37-18) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../libc-bin_2.37-18_amd64.deb ... Unpacking libc-bin (2.37-18) over (2.37-15) ... Setting up libc-bin (2.37-18) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../ncurses-base_6.4+20240414-1_all.deb ... Unpacking ncurses-base (6.4+20240414-1) over (6.4+20240113-1) ... Setting up ncurses-base (6.4+20240414-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../libcap-ng0_0.8.5-1_amd64.deb ... Unpacking libcap-ng0:amd64 (0.8.5-1) over (0.8.4-2) ... Setting up libcap-ng0:amd64 (0.8.5-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5223 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.4+20240414-1_amd64.deb ... Unpacking libtinfo6:amd64 (6.4+20240414-1) over (6.4+20240113-1) ... Setting up libtinfo6:amd64 (6.4+20240414-1) ... Processing triggers for libc-bin (2.37-18) ... 0m6.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', '-yf', 'dist-upgrade'] 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.1s DUMP: e6f773b1e112f5e41b4bac454ff7bff5 - 0m7.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.1s INFO: Running scripts post_setup 0m7.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_dummy_users'] 0m8.3s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_dummy_users'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_forbid_home'] 0m8.3s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_forbid_home'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.3s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_force-unsafe-io'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_minimize'] 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_minimize'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_squeeze-backports'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_zz_backports'] 0m8.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_setup_zz_backports'] 0m8.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', 'clean'] 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', 'clean'] 0m8.4s DEBUG: Recording chroot state 0m8.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.9s DUMP: install ok installed apt apt 2.7.12 install ok installed base-files base-files 13.1 install ok installed base-passwd base-passwd 3.6.3 install ok installed bash bash 5.2.21-2 install ok installed bsdutils bsdutils 1:2.39.3-6 install ok installed coreutils coreutils 9.4-3+b1 install ok installed dash dash 0.5.12-6 install ok installed debconf debconf 1.5.86 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.17 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.6 install ok installed e2fsprogs e2fsprogs 1.47.0-2+b1 install ok installed findutils findutils 4.9.0-5 install ok installed gcc-14-base:amd64 gcc-14-base 14-20240330-1 install ok installed gpgv gpgv 2.2.40-1.1+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-1 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.7.12 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-2 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-2 install ok installed libblkid1:amd64 libblkid1 2.39.3-6 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5.1 install ok installed libc-bin libc-bin 2.37-18 install ok installed libc6:amd64 libc6 2.37-18 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-1 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-4+b1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.271+b1 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2+b1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14-20240330-1 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.3-2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30:amd64 libgnutls30 3.8.3-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.47-3 install ok installed libhogweed6:amd64 libhogweed6 3.9.1-2+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-2 install ok installed liblzma5:amd64 liblzma5 5.6.1+really5.4.5-1 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.39.3-6 install ok installed libnettle8:amd64 libnettle8 3.9.1-2+b1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.3-4 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-9.1+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-9.1+b1 install ok installed libpam-runtime libpam-runtime 1.5.2-9.1 install ok installed libpam0g:amd64 libpam0g 1.5.2-9.1+b1 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1 install ok installed libselinux1:amd64 libselinux1 3.5-2 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b2 install ok installed libsepol2:amd64 libsepol2 3.5-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.39.3-6 install ok installed libss2:amd64 libss2 1.47.0-2+b1 install ok installed libssl3:amd64 libssl3 3.1.5-1 install ok installed libstdc++6:amd64 libstdc++6 14-20240330-1 install ok installed libsystemd0:amd64 libsystemd0 255.4-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.4+20240414-1 install ok installed libudev1:amd64 libudev1 255.4-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.39.3-6 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-2 install ok installed login login 1:4.13+dfsg1-4 install ok installed logsave logsave 1.47.0-2+b1 install ok installed mawk mawk 1.3.4.20240123-1 install ok installed mount mount 2.39.3-6 install ok installed ncurses-base ncurses-base 6.4+20240414-1 install ok installed ncurses-bin ncurses-bin 6.4+20240414-1 install ok installed passwd passwd 1:4.13+dfsg1-4 install ok installed perl-base perl-base 5.38.2-3 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.08-7 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.39.3-6 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg-3+b1 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg-divert', '--list'] 0m8.9s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg-divert', '--list'] 0m8.9s INFO: Running scripts is_testable 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/is_testable_uninstallable'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/is_testable_uninstallable'] 0m8.9s INFO: apt-cache does not know about any of the requested packages 0m8.9s INFO: Running scripts pre_test 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_test_exceptions'] 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_test_exceptions'] 0m8.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_test_root_password'] 0m8.9s DUMP: New password: Retype new password: passwd: password updated successfully 0m8.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_test_root_password'] 0m8.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m9.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m9.7s DEBUG: No broken symlinks as far as we can find. 0m9.7s INFO: Running scripts pre_install 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_database-server'] 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_database-server'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_exceptions'] 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_exceptions'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_extras'] 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_extras'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_foreign_architecture'] 0m9.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m9.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m10.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m10.4s DEBUG: No broken symlinks as far as we can find. 0m10.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-cache', 'policy'] 0m11.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m11.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-cache', 'policy'] 0m11.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-cache', 'policy', 'mrbayes-mpi'] 0m11.5s DUMP: mrbayes-mpi: Installed: (none) Candidate: 3.2.7a-7+b1 Version table: 3.2.7a-7+b1 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m11.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-cache', 'policy', 'mrbayes-mpi'] 0m11.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', '-y', 'install', 'mrbayes-mpi=3.2.7a-7+b1'] 0m31.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: adduser dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dmsetup ibverbs-providers krb5-locales libapparmor1 libargon2-1 libatomic1 libbsd0 libcbor0.10 libclang-common-17-dev libclang-cpp17 libclang-rt-17-dev libclc-17 libclc-17-dev libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libevent-core-2.1-7 libevent-pthreads-2.1-7 libexpat1 libfabric1 libfdisk1 libfido2-1 libgpm2 libgssapi-krb5-2 libhmsbeagle1v5 libhwloc-plugins libhwloc15 libibverbs1 libicu72 libjson-c5 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 libllvm17 libllvmspirvlib17 libmunge2 libncursesw6 libnl-3-200 libnl-route-3-200 libnss-systemd libnuma1 libopenmpi3 libpam-systemd libpciaccess0 libpmix2 libproc2-0 libpsm-infinipath1 libpsm2-2 librdmacm1 libreadline8t64 libsystemd-shared libucx0 libwrap0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxmuu1 libxnvctrl0 libz3-4 mesa-opencl-icd mpi-default-bin ncurses-term ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssh-server openssh-sftp-server procps psmisc readline-common runit-helper sensible-utils ssh systemd systemd-dev systemd-sysv systemd-timesyncd ucf xauth Suggested packages: liblocale-gettext-perl perl cron quota gpm krb5-doc krb5-user libhwloc-contrib-plugins pciutils mpi-default mrbayes-doc gfortran | fortran-compiler keychain libpam-ssh monkeysphere ssh-askpass molly-guard ufw readline-doc systemd-container systemd-homed systemd-userdbd systemd-boot systemd-resolved libip4tc2 libqrencode4 libtss2-esys-3.0.2-0 libtss2-mu-4.0.1-0 libtss2-rc0 libtss2-tcti-device0 polkitd The following NEW packages will be installed: adduser dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dmsetup ibverbs-providers krb5-locales libapparmor1 libargon2-1 libatomic1 libbsd0 libcbor0.10 libclang-common-17-dev libclang-cpp17 libclang-rt-17-dev libclc-17 libclc-17-dev libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libevent-core-2.1-7 libevent-pthreads-2.1-7 libexpat1 libfabric1 libfdisk1 libfido2-1 libgpm2 libgssapi-krb5-2 libhmsbeagle1v5 libhwloc-plugins libhwloc15 libibverbs1 libicu72 libjson-c5 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 libllvm17 libllvmspirvlib17 libmunge2 libncursesw6 libnl-3-200 libnl-route-3-200 libnss-systemd libnuma1 libopenmpi3 libpam-systemd libpciaccess0 libpmix2 libproc2-0 libpsm-infinipath1 libpsm2-2 librdmacm1 libreadline8t64 libsystemd-shared libucx0 libwrap0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxmuu1 libxnvctrl0 libz3-4 mesa-opencl-icd mpi-default-bin mrbayes-mpi ncurses-term ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssh-server openssh-sftp-server procps psmisc readline-common runit-helper sensible-utils ssh systemd systemd-dev systemd-sysv systemd-timesyncd ucf xauth 0 upgraded, 101 newly installed, 0 to remove and 0 not upgraded. Need to get 108 MB of archives. After this operation, 566 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 libapparmor1 amd64 3.0.13-2 [41.6 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libargon2-1 amd64 0~20190702+dfsg-4+b1 [21.1 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 dmsetup amd64 2:1.02.196-1+b1 [82.6 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 libdevmapper1.02.1 amd64 2:1.02.196-1+b1 [134 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 libjson-c5 amd64 0.17-1+b1 [44.2 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 libcryptsetup12 amd64 2:2.6.1-6+b1 [224 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 libfdisk1 amd64 2.39.3-6 [202 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libkmod2 amd64 31+20240202-2 [59.6 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libsystemd-shared amd64 255.4-1 [1936 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 systemd-dev all 255.4-1 [59.7 kB] Get:11 http://deb.debian.org/debian trixie/main amd64 systemd amd64 255.4-1 [3528 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 systemd-sysv amd64 255.4-1 [50.4 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 libdbus-1-3 amd64 1.14.10-4 [203 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 dbus-bin amd64 1.14.10-4 [106 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 dbus-session-bus-common all 1.14.10-4 [79.0 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 dbus-daemon amd64 1.14.10-4 [184 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 adduser all 3.137 [140 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 dbus-system-bus-common all 1.14.10-4 [80.1 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 dbus amd64 1.14.10-4 [98.3 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get:22 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20230828-1 [93.1 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 libcbor0.10 amd64 0.10.2-1.1 [27.8 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 libfido2-1 amd64 1.14.0-1 [77.4 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.20.1-5+b1 [33.2 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.20.1-5+b1 [80.0 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:28 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.20.1-5+b1 [333 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.20.1-5+b1 [135 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 openssh-client amd64 1:9.6p1-4 [975 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 openssh-sftp-server amd64 1:9.6p1-4 [65.4 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.4+20240414-1 [135 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-4 [64.6 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-4 [880 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 runit-helper all 2.16.2 [6568 B] Get:38 http://deb.debian.org/debian trixie/main amd64 libwrap0 amd64 7.6.q-33 [55.1 kB] Get:39 http://deb.debian.org/debian trixie/main amd64 openssh-server amd64 1:9.6p1-4 [456 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-4 [69.3 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 krb5-locales all 1.20.1-5 [63.1 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 libnss-systemd amd64 255.4-1 [189 kB] Get:43 http://deb.debian.org/debian trixie/main amd64 libpam-systemd amd64 255.4-1 [260 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 ncurses-term all 6.4+20240414-1 [513 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 systemd-timesyncd amd64 255.4-1 [73.1 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 dbus-user-session amd64 1.14.10-4 [78.9 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 libnl-3-200 amd64 3.7.0-0.3 [59.0 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 libnl-route-3-200 amd64 3.7.0-0.3 [181 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 libibverbs1 amd64 48.0-1.1 [61.2 kB] Get:50 http://deb.debian.org/debian trixie/main amd64 ibverbs-providers amd64 48.0-1.1 [340 kB] Get:51 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14-20240330-1 [9216 B] Get:52 http://deb.debian.org/debian trixie/main amd64 libclang-common-17-dev all 1:17.0.6-5 [681 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b2 [692 kB] Get:55 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get:56 http://deb.debian.org/debian trixie/main amd64 libllvm17 amd64 1:17.0.6-5 [23.7 MB] Get:57 http://deb.debian.org/debian trixie/main amd64 libclang-cpp17 amd64 1:17.0.6-5 [11.8 MB] Get:58 http://deb.debian.org/debian trixie/main amd64 libclang-rt-17-dev amd64 1:17.0.6-5 [2311 kB] Get:59 http://deb.debian.org/debian trixie/main amd64 libclc-17-dev all 1:17.0.6-5 [60.5 kB] Get:60 http://deb.debian.org/debian trixie/main amd64 libclc-17 all 1:17.0.6-5 [9850 kB] Get:61 http://deb.debian.org/debian trixie/main amd64 libdrm-common all 2.4.120-2 [7688 B] Get:62 http://deb.debian.org/debian trixie/main amd64 libdrm2 amd64 2.4.120-2 [38.1 kB] Get:63 http://deb.debian.org/debian trixie/main amd64 libdrm-amdgpu1 amd64 2.4.120-2 [21.4 kB] Get:64 http://deb.debian.org/debian trixie/main amd64 libdrm-nouveau2 amd64 2.4.120-2 [19.3 kB] Get:65 http://deb.debian.org/debian trixie/main amd64 libdrm-radeon1 amd64 2.4.120-2 [22.2 kB] Get:66 http://deb.debian.org/debian trixie/main amd64 libelf1 amd64 0.190-1+b1 [176 kB] Get:67 http://deb.debian.org/debian trixie/main amd64 libevent-core-2.1-7 amd64 2.1.12-stable-8 [131 kB] Get:68 http://deb.debian.org/debian trixie/main amd64 libevent-pthreads-2.1-7 amd64 2.1.12-stable-8 [53.6 kB] Get:69 http://deb.debian.org/debian trixie/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get:70 http://deb.debian.org/debian trixie/main amd64 libnuma1 amd64 2.0.18-1 [21.9 kB] Get:71 http://deb.debian.org/debian trixie/main amd64 libpsm2-2 amd64 11.2.185-2 [180 kB] Get:72 http://deb.debian.org/debian trixie/main amd64 librdmacm1 amd64 48.0-1.1 [69.5 kB] Get:73 http://deb.debian.org/debian trixie/main amd64 libfabric1 amd64 1.17.0-3 [627 kB] Get:74 http://deb.debian.org/debian trixie/main amd64 libgpm2 amd64 1.20.7-11 [14.0 kB] Get:75 http://deb.debian.org/debian trixie/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b1 [40.3 kB] Get:76 http://deb.debian.org/debian trixie/main amd64 libllvmspirvlib17 amd64 17.0.0-4 [814 kB] Get:77 http://deb.debian.org/debian trixie/main amd64 mesa-opencl-icd amd64 23.3.5-1 [19.3 MB] Get:78 http://deb.debian.org/debian trixie/main amd64 libhmsbeagle1v5 amd64 3.1.2+dfsg-13 [135 kB] Get:79 http://deb.debian.org/debian trixie/main amd64 libpciaccess0 amd64 0.17-3 [51.6 kB] Get:80 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get:81 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get:82 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get:83 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:84 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.7-1 [802 kB] Get:85 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:86 http://deb.debian.org/debian trixie/main amd64 libxnvctrl0 amd64 535.171.04-1 [13.8 kB] Get:87 http://deb.debian.org/debian trixie/main amd64 libhwloc15 amd64 2.10.0-1+b1 [161 kB] Get:88 http://deb.debian.org/debian trixie/main amd64 libhwloc-plugins amd64 2.10.0-1+b1 [18.0 kB] Get:89 http://deb.debian.org/debian trixie/main amd64 libmunge2 amd64 0.5.15-4 [19.8 kB] Get:90 http://deb.debian.org/debian trixie/main amd64 libpmix2 amd64 5.0.1-4+b1 [645 kB] Get:91 http://deb.debian.org/debian trixie/main amd64 libucx0 amd64 1.15.0-1 [940 kB] Get:92 http://deb.debian.org/debian trixie/main amd64 libopenmpi3 amd64 4.1.6-5 [2427 kB] Get:93 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get:94 http://deb.debian.org/debian trixie/main amd64 libxmuu1 amd64 2:1.1.3-3 [23.9 kB] Get:95 http://deb.debian.org/debian trixie/main amd64 openmpi-common all 4.1.6-5 [168 kB] Get:96 http://deb.debian.org/debian trixie/main amd64 openmpi-bin amd64 4.1.6-5 [226 kB] Get:97 http://deb.debian.org/debian trixie/main amd64 mpi-default-bin amd64 1.15 [2408 B] Get:98 http://deb.debian.org/debian trixie/main amd64 ssh all 1:9.6p1-4 [155 kB] Get:99 http://deb.debian.org/debian trixie/main amd64 mrbayes-mpi amd64 3.2.7a-7+b1 [598 kB] Get:100 http://deb.debian.org/debian trixie/main amd64 psmisc amd64 23.7-1 [266 kB] Get:101 http://deb.debian.org/debian trixie/main amd64 xauth amd64 1:1.1.2-1 [36.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 108 MB in 4s (26.5 MB/s) Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5227 files and directories currently installed.) Preparing to unpack .../00-libapparmor1_3.0.13-2_amd64.deb ... Unpacking libapparmor1:amd64 (3.0.13-2) ... Selecting previously unselected package libargon2-1:amd64. Preparing to unpack .../01-libargon2-1_0~20190702+dfsg-4+b1_amd64.deb ... Unpacking libargon2-1:amd64 (0~20190702+dfsg-4+b1) ... Selecting previously unselected package dmsetup. Preparing to unpack .../02-dmsetup_2%3a1.02.196-1+b1_amd64.deb ... Unpacking dmsetup (2:1.02.196-1+b1) ... Selecting previously unselected package libdevmapper1.02.1:amd64. Preparing to unpack .../03-libdevmapper1.02.1_2%3a1.02.196-1+b1_amd64.deb ... Unpacking libdevmapper1.02.1:amd64 (2:1.02.196-1+b1) ... Selecting previously unselected package libjson-c5:amd64. Preparing to unpack .../04-libjson-c5_0.17-1+b1_amd64.deb ... Unpacking libjson-c5:amd64 (0.17-1+b1) ... Selecting previously unselected package libcryptsetup12:amd64. Preparing to unpack .../05-libcryptsetup12_2%3a2.6.1-6+b1_amd64.deb ... Unpacking libcryptsetup12:amd64 (2:2.6.1-6+b1) ... Selecting previously unselected package libfdisk1:amd64. Preparing to unpack .../06-libfdisk1_2.39.3-6_amd64.deb ... Unpacking libfdisk1:amd64 (2.39.3-6) ... Selecting previously unselected package libkmod2:amd64. Preparing to unpack .../07-libkmod2_31+20240202-2_amd64.deb ... Unpacking libkmod2:amd64 (31+20240202-2) ... Selecting previously unselected package libsystemd-shared:amd64. Preparing to unpack .../08-libsystemd-shared_255.4-1_amd64.deb ... Unpacking libsystemd-shared:amd64 (255.4-1) ... Selecting previously unselected package systemd-dev. Preparing to unpack .../09-systemd-dev_255.4-1_all.deb ... Unpacking systemd-dev (255.4-1) ... Selecting previously unselected package systemd. Preparing to unpack .../10-systemd_255.4-1_amd64.deb ... Unpacking systemd (255.4-1) ... Setting up libapparmor1:amd64 (3.0.13-2) ... Setting up libargon2-1:amd64 (0~20190702+dfsg-4+b1) ... Setting up libjson-c5:amd64 (0.17-1+b1) ... Setting up libfdisk1:amd64 (2.39.3-6) ... Setting up libkmod2:amd64 (31+20240202-2) ... Setting up libsystemd-shared:amd64 (255.4-1) ... Setting up systemd-dev (255.4-1) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.196-1+b1) ... Setting up libcryptsetup12:amd64 (2:2.6.1-6+b1) ... Setting up systemd (255.4-1) ... Created symlink /etc/systemd/system/getty.target.wants/getty@tty1.service → /usr/lib/systemd/system/getty@.service. Created symlink /etc/systemd/system/multi-user.target.wants/remote-fs.target → /usr/lib/systemd/system/remote-fs.target. Created symlink /etc/systemd/system/sysinit.target.wants/systemd-pstore.service → /usr/lib/systemd/system/systemd-pstore.service. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. [ESC][0;1;31m"/home" already exists and is not a directory.[ESC][0m Setting up dmsetup (2:1.02.196-1+b1) ... Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6324 files and directories currently installed.) Preparing to unpack .../0-systemd-sysv_255.4-1_amd64.deb ... Unpacking systemd-sysv (255.4-1) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../1-libdbus-1-3_1.14.10-4_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.14.10-4) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../2-dbus-bin_1.14.10-4_amd64.deb ... Unpacking dbus-bin (1.14.10-4) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../3-dbus-session-bus-common_1.14.10-4_all.deb ... Unpacking dbus-session-bus-common (1.14.10-4) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../4-libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../5-dbus-daemon_1.14.10-4_amd64.deb ... Unpacking dbus-daemon (1.14.10-4) ... Selecting previously unselected package adduser. Preparing to unpack .../6-adduser_3.137_all.deb ... Unpacking adduser (3.137) ... Setting up adduser (3.137) ... Selecting previously unselected package dbus-system-bus-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 6467 files and directories currently installed.) Preparing to unpack .../00-dbus-system-bus-common_1.14.10-4_all.deb ... Unpacking dbus-system-bus-common (1.14.10-4) ... Selecting previously unselected package dbus. Preparing to unpack .../01-dbus_1.14.10-4_amd64.deb ... Unpacking dbus (1.14.10-4) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../02-libbsd0_0.12.2-1_amd64.deb ... Unpacking libbsd0:amd64 (0.12.2-1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../03-libedit2_3.1-20230828-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20230828-1) ... Selecting previously unselected package libcbor0.10:amd64. Preparing to unpack .../04-libcbor0.10_0.10.2-1.1_amd64.deb ... Unpacking libcbor0.10:amd64 (0.10.2-1.1) ... Selecting previously unselected package libfido2-1:amd64. Preparing to unpack .../05-libfido2-1_1.14.0-1_amd64.deb ... Unpacking libfido2-1:amd64 (1.14.0-1) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../06-libkrb5support0_1.20.1-5+b1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.20.1-5+b1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../07-libk5crypto3_1.20.1-5+b1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.20.1-5+b1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../08-libkeyutils1_1.6.3-3_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../09-libkrb5-3_1.20.1-5+b1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.20.1-5+b1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../10-libgssapi-krb5-2_1.20.1-5+b1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../11-openssh-client_1%3a9.6p1-4_amd64.deb ... Unpacking openssh-client (1:9.6p1-4) ... Selecting previously unselected package openssh-sftp-server. Preparing to unpack .../12-openssh-sftp-server_1%3a9.6p1-4_amd64.deb ... Unpacking openssh-sftp-server (1:9.6p1-4) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../13-libncursesw6_6.4+20240414-1_amd64.deb ... Unpacking libncursesw6:amd64 (6.4+20240414-1) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../14-libproc2-0_2%3a4.0.4-4_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../15-procps_2%3a4.0.4-4_amd64.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../16-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package ucf. Preparing to unpack .../17-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package runit-helper. Preparing to unpack .../18-runit-helper_2.16.2_all.deb ... Unpacking runit-helper (2.16.2) ... Selecting previously unselected package libwrap0:amd64. Preparing to unpack .../19-libwrap0_7.6.q-33_amd64.deb ... Unpacking libwrap0:amd64 (7.6.q-33) ... Selecting previously unselected package openssh-server. Preparing to unpack .../20-openssh-server_1%3a9.6p1-4_amd64.deb ... Unpacking openssh-server (1:9.6p1-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../21-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package krb5-locales. Preparing to unpack .../22-krb5-locales_1.20.1-5_all.deb ... Unpacking krb5-locales (1.20.1-5) ... Selecting previously unselected package libnss-systemd:amd64. Preparing to unpack .../23-libnss-systemd_255.4-1_amd64.deb ... Unpacking libnss-systemd:amd64 (255.4-1) ... Selecting previously unselected package libpam-systemd:amd64. Preparing to unpack .../24-libpam-systemd_255.4-1_amd64.deb ... Unpacking libpam-systemd:amd64 (255.4-1) ... Selecting previously unselected package ncurses-term. Preparing to unpack .../25-ncurses-term_6.4+20240414-1_all.deb ... Unpacking ncurses-term (6.4+20240414-1) ... Selecting previously unselected package systemd-timesyncd. Preparing to unpack .../26-systemd-timesyncd_255.4-1_amd64.deb ... Unpacking systemd-timesyncd (255.4-1) ... Selecting previously unselected package dbus-user-session. Preparing to unpack .../27-dbus-user-session_1.14.10-4_amd64.deb ... Unpacking dbus-user-session (1.14.10-4) ... Selecting previously unselected package libnl-3-200:amd64. Preparing to unpack .../28-libnl-3-200_3.7.0-0.3_amd64.deb ... Unpacking libnl-3-200:amd64 (3.7.0-0.3) ... Selecting previously unselected package libnl-route-3-200:amd64. Preparing to unpack .../29-libnl-route-3-200_3.7.0-0.3_amd64.deb ... Unpacking libnl-route-3-200:amd64 (3.7.0-0.3) ... Selecting previously unselected package libibverbs1:amd64. Preparing to unpack .../30-libibverbs1_48.0-1.1_amd64.deb ... Unpacking libibverbs1:amd64 (48.0-1.1) ... Selecting previously unselected package ibverbs-providers:amd64. Preparing to unpack .../31-ibverbs-providers_48.0-1.1_amd64.deb ... Unpacking ibverbs-providers:amd64 (48.0-1.1) ... Selecting previously unselected package libatomic1:amd64. Preparing to unpack .../32-libatomic1_14-20240330-1_amd64.deb ... Unpacking libatomic1:amd64 (14-20240330-1) ... Selecting previously unselected package libclang-common-17-dev. Preparing to unpack .../33-libclang-common-17-dev_1%3a17.0.6-5_all.deb ... Unpacking libclang-common-17-dev (1:17.0.6-5) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../34-libicu72_72.1-4+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-4+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../35-libxml2_2.9.14+dfsg-1.3+b2_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package libz3-4:amd64. Preparing to unpack .../36-libz3-4_4.8.12-3.1+b2_amd64.deb ... Unpacking libz3-4:amd64 (4.8.12-3.1+b2) ... Selecting previously unselected package libllvm17:amd64. Preparing to unpack .../37-libllvm17_1%3a17.0.6-5_amd64.deb ... Unpacking libllvm17:amd64 (1:17.0.6-5) ... Selecting previously unselected package libclang-cpp17. Preparing to unpack .../38-libclang-cpp17_1%3a17.0.6-5_amd64.deb ... Unpacking libclang-cpp17 (1:17.0.6-5) ... Selecting previously unselected package libclang-rt-17-dev:amd64. Preparing to unpack .../39-libclang-rt-17-dev_1%3a17.0.6-5_amd64.deb ... Unpacking libclang-rt-17-dev:amd64 (1:17.0.6-5) ... Selecting previously unselected package libclc-17-dev. Preparing to unpack .../40-libclc-17-dev_1%3a17.0.6-5_all.deb ... Unpacking libclc-17-dev (1:17.0.6-5) ... Selecting previously unselected package libclc-17. Preparing to unpack .../41-libclc-17_1%3a17.0.6-5_all.deb ... Unpacking libclc-17 (1:17.0.6-5) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../42-libdrm-common_2.4.120-2_all.deb ... Unpacking libdrm-common (2.4.120-2) ... Selecting previously unselected package libdrm2:amd64. Preparing to unpack .../43-libdrm2_2.4.120-2_amd64.deb ... Unpacking libdrm2:amd64 (2.4.120-2) ... Selecting previously unselected package libdrm-amdgpu1:amd64. Preparing to unpack .../44-libdrm-amdgpu1_2.4.120-2_amd64.deb ... Unpacking libdrm-amdgpu1:amd64 (2.4.120-2) ... Selecting previously unselected package libdrm-nouveau2:amd64. Preparing to unpack .../45-libdrm-nouveau2_2.4.120-2_amd64.deb ... Unpacking libdrm-nouveau2:amd64 (2.4.120-2) ... Selecting previously unselected package libdrm-radeon1:amd64. Preparing to unpack .../46-libdrm-radeon1_2.4.120-2_amd64.deb ... Unpacking libdrm-radeon1:amd64 (2.4.120-2) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../47-libelf1_0.190-1+b1_amd64.deb ... Unpacking libelf1:amd64 (0.190-1+b1) ... Selecting previously unselected package libevent-core-2.1-7:amd64. Preparing to unpack .../48-libevent-core-2.1-7_2.1.12-stable-8_amd64.deb ... Unpacking libevent-core-2.1-7:amd64 (2.1.12-stable-8) ... Selecting previously unselected package libevent-pthreads-2.1-7:amd64. Preparing to unpack .../49-libevent-pthreads-2.1-7_2.1.12-stable-8_amd64.deb ... Unpacking libevent-pthreads-2.1-7:amd64 (2.1.12-stable-8) ... Selecting previously unselected package libpsm-infinipath1. Preparing to unpack .../50-libpsm-infinipath1_3.3+20.604758e7-6.3_amd64.deb ... Unpacking libpsm-infinipath1 (3.3+20.604758e7-6.3) ... Selecting previously unselected package libnuma1:amd64. Preparing to unpack .../51-libnuma1_2.0.18-1_amd64.deb ... Unpacking libnuma1:amd64 (2.0.18-1) ... Selecting previously unselected package libpsm2-2. Preparing to unpack .../52-libpsm2-2_11.2.185-2_amd64.deb ... Unpacking libpsm2-2 (11.2.185-2) ... Selecting previously unselected package librdmacm1:amd64. Preparing to unpack .../53-librdmacm1_48.0-1.1_amd64.deb ... Unpacking librdmacm1:amd64 (48.0-1.1) ... Selecting previously unselected package libfabric1:amd64. Preparing to unpack .../54-libfabric1_1.17.0-3_amd64.deb ... Unpacking libfabric1:amd64 (1.17.0-3) ... Selecting previously unselected package libgpm2:amd64. Preparing to unpack .../55-libgpm2_1.20.7-11_amd64.deb ... Unpacking libgpm2:amd64 (1.20.7-11) ... Selecting previously unselected package ocl-icd-libopencl1:amd64. Preparing to unpack .../56-ocl-icd-libopencl1_2.3.2-1+b1_amd64.deb ... Unpacking ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Selecting previously unselected package libllvmspirvlib17:amd64. Preparing to unpack .../57-libllvmspirvlib17_17.0.0-4_amd64.deb ... Unpacking libllvmspirvlib17:amd64 (17.0.0-4) ... Selecting previously unselected package mesa-opencl-icd:amd64. Preparing to unpack .../58-mesa-opencl-icd_23.3.5-1_amd64.deb ... Unpacking mesa-opencl-icd:amd64 (23.3.5-1) ... Selecting previously unselected package libhmsbeagle1v5:amd64. Preparing to unpack .../59-libhmsbeagle1v5_3.1.2+dfsg-13_amd64.deb ... Unpacking libhmsbeagle1v5:amd64 (3.1.2+dfsg-13) ... Selecting previously unselected package libpciaccess0:amd64. Preparing to unpack .../60-libpciaccess0_0.17-3_amd64.deb ... Unpacking libpciaccess0:amd64 (0.17-3) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../61-libxau6_1%3a1.0.9-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../62-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../63-libxcb1_1.15-1_amd64.deb ... Unpacking libxcb1:amd64 (1.15-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../64-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../65-libx11-6_2%3a1.8.7-1_amd64.deb ... Unpacking libx11-6:amd64 (2:1.8.7-1) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../66-libxext6_2%3a1.3.4-1+b1_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.4-1+b1) ... Selecting previously unselected package libxnvctrl0:amd64. Preparing to unpack .../67-libxnvctrl0_535.171.04-1_amd64.deb ... Unpacking libxnvctrl0:amd64 (535.171.04-1) ... Selecting previously unselected package libhwloc15:amd64. Preparing to unpack .../68-libhwloc15_2.10.0-1+b1_amd64.deb ... Unpacking libhwloc15:amd64 (2.10.0-1+b1) ... Selecting previously unselected package libhwloc-plugins:amd64. Preparing to unpack .../69-libhwloc-plugins_2.10.0-1+b1_amd64.deb ... Unpacking libhwloc-plugins:amd64 (2.10.0-1+b1) ... Selecting previously unselected package libmunge2:amd64. Preparing to unpack .../70-libmunge2_0.5.15-4_amd64.deb ... Unpacking libmunge2:amd64 (0.5.15-4) ... Selecting previously unselected package libpmix2:amd64. Preparing to unpack .../71-libpmix2_5.0.1-4+b1_amd64.deb ... Unpacking libpmix2:amd64 (5.0.1-4+b1) ... Selecting previously unselected package libucx0:amd64. Preparing to unpack .../72-libucx0_1.15.0-1_amd64.deb ... Unpacking libucx0:amd64 (1.15.0-1) ... Selecting previously unselected package libopenmpi3:amd64. Preparing to unpack .../73-libopenmpi3_4.1.6-5_amd64.deb ... Unpacking libopenmpi3:amd64 (4.1.6-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../74-libreadline8t64_8.2-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libxmuu1:amd64. Preparing to unpack .../75-libxmuu1_2%3a1.1.3-3_amd64.deb ... Unpacking libxmuu1:amd64 (2:1.1.3-3) ... Selecting previously unselected package openmpi-common. Preparing to unpack .../76-openmpi-common_4.1.6-5_all.deb ... Unpacking openmpi-common (4.1.6-5) ... Selecting previously unselected package openmpi-bin. Preparing to unpack .../77-openmpi-bin_4.1.6-5_amd64.deb ... Unpacking openmpi-bin (4.1.6-5) ... Selecting previously unselected package mpi-default-bin. Preparing to unpack .../78-mpi-default-bin_1.15_amd64.deb ... Unpacking mpi-default-bin (1.15) ... Selecting previously unselected package ssh. Preparing to unpack .../79-ssh_1%3a9.6p1-4_all.deb ... Unpacking ssh (1:9.6p1-4) ... Selecting previously unselected package mrbayes-mpi. Preparing to unpack .../80-mrbayes-mpi_3.2.7a-7+b1_amd64.deb ... Unpacking mrbayes-mpi (3.2.7a-7+b1) ... Selecting previously unselected package psmisc. Preparing to unpack .../81-psmisc_23.7-1_amd64.deb ... Unpacking psmisc (23.7-1) ... Selecting previously unselected package xauth. Preparing to unpack .../82-xauth_1%3a1.1.2-1_amd64.deb ... Unpacking xauth (1:1.1.2-1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up runit-helper (2.16.2) ... Setting up libpciaccess0:amd64 (0.17-3) ... Setting up systemd-sysv (255.4-1) ... Setting up libxau6:amd64 (1:1.0.9-1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libgpm2:amd64 (1.20.7-11) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up psmisc (23.7-1) ... Setting up libcbor0.10:amd64 (0.10.2-1.1) ... Setting up libnss-systemd:amd64 (255.4-1) ... Setting up krb5-locales (1.20.1-5) ... Setting up libkrb5support0:amd64 (1.20.1-5+b1) ... Setting up libz3-4:amd64 (4.8.12-3.1+b2) ... Setting up libmunge2:amd64 (0.5.15-4) ... Setting up libwrap0:amd64 (7.6.q-33) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libclc-17-dev (1:17.0.6-5) ... Setting up libdbus-1-3:amd64 (1.14.10-4) ... Setting up libproc2-0:amd64 (2:4.0.4-4) ... Setting up libhwloc15:amd64 (2.10.0-1+b1) ... Setting up systemd-timesyncd (255.4-1) ... Creating group 'systemd-timesync' with GID 997. Creating user 'systemd-timesync' (systemd Time Synchronization) with UID 997 and GID 997. Created symlink /etc/systemd/system/dbus-org.freedesktop.timesync1.service → /usr/lib/systemd/system/systemd-timesyncd.service. Created symlink /etc/systemd/system/sysinit.target.wants/systemd-timesyncd.service → /usr/lib/systemd/system/systemd-timesyncd.service. Setting up libevent-core-2.1-7:amd64 (2.1.12-stable-8) ... Setting up libatomic1:amd64 (14-20240330-1) ... Setting up libncursesw6:amd64 (6.4+20240414-1) ... Setting up libk5crypto3:amd64 (1.20.1-5+b1) ... Setting up libnuma1:amd64 (2.0.18-1) ... Setting up sensible-utils (0.0.22) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Setting up libclang-common-17-dev (1:17.0.6-5) ... Setting up libclc-17 (1:17.0.6-5) ... Setting up dbus-session-bus-common (1.14.10-4) ... Setting up libclang-rt-17-dev:amd64 (1:17.0.6-5) ... Setting up procps (2:4.0.4-4) ... Setting up libnl-3-200:amd64 (3.7.0-0.3) ... Setting up libpsm2-2 (11.2.185-2) ... Setting up openmpi-common (4.1.6-5) ... Setting up libkrb5-3:amd64 (1.20.1-5+b1) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up dbus-system-bus-common (1.14.10-4) ... Setting up libfido2-1:amd64 (1.14.0-1) ... Setting up libbsd0:amd64 (0.12.2-1) ... Setting up libdrm-common (2.4.120-2) ... Setting up libelf1:amd64 (0.190-1+b1) ... Setting up readline-common (8.2-4) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b2) ... Setting up dbus-bin (1.14.10-4) ... Setting up libevent-pthreads-2.1-7:amd64 (2.1.12-stable-8) ... Setting up ncurses-term (6.4+20240414-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.15-1) ... Setting up libedit2:amd64 (3.1-20230828-1) ... Setting up dbus-daemon (1.14.10-4) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3) ... Setting up dbus (1.14.10-4) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... Setting up ucf (3.0043+nmu1) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up libdrm2:amd64 (2.4.120-2) ... Setting up libpam-systemd:amd64 (255.4-1) ... Setting up libx11-6:amd64 (2:1.8.7-1) ... Setting up libllvm17:amd64 (1:17.0.6-5) ... Setting up libxmuu1:amd64 (2:1.1.3-3) ... Setting up libllvmspirvlib17:amd64 (17.0.0-4) ... Setting up libdrm-amdgpu1:amd64 (2.4.120-2) ... Setting up libibverbs1:amd64 (48.0-1.1) ... Setting up libdrm-nouveau2:amd64 (2.4.120-2) ... Setting up ibverbs-providers:amd64 (48.0-1.1) ... Setting up libdrm-radeon1:amd64 (2.4.120-2) ... Setting up openssh-client (1:9.6p1-4) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1) ... Setting up dbus-user-session (1.14.10-4) ... Setting up xauth (1:1.1.2-1) ... Setting up libclang-cpp17 (1:17.0.6-5) ... Setting up mesa-opencl-icd:amd64 (23.3.5-1) ... Setting up librdmacm1:amd64 (48.0-1.1) ... Setting up openssh-sftp-server (1:9.6p1-4) ... Setting up libucx0:amd64 (1.15.0-1) ... Setting up openssh-server (1:9.6p1-4) ... Creating config file /etc/ssh/sshd_config with new version Creating SSH2 RSA key; this may take some time ... 3072 SHA256:LN+YVd+PsKby9FsIB/Ufw7yALng2YSN9jM55XMGS2ZA root@piu-slave-ubc-01 (RSA) Creating SSH2 ECDSA key; this may take some time ... 256 SHA256:Nb7LfQZo1GzM4Ow213kuanN5ElAiSyV9k1TaaOywq/c root@piu-slave-ubc-01 (ECDSA) Creating SSH2 ED25519 key; this may take some time ... 256 SHA256:tZZcizMs9z37s6PDwI9dXh0Hjs2GGCFIk1UF5djHZOs root@piu-slave-ubc-01 (ED25519) Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Created symlink /etc/systemd/system/sshd.service → /usr/lib/systemd/system/ssh.service. Created symlink /etc/systemd/system/multi-user.target.wants/ssh.service → /usr/lib/systemd/system/ssh.service. Setting up libhmsbeagle1v5:amd64 (3.1.2+dfsg-13) ... Setting up libhwloc-plugins:amd64 (2.10.0-1+b1) ... Setting up libfabric1:amd64 (1.17.0-3) ... Setting up ssh (1:9.6p1-4) ... Setting up libpmix2:amd64 (5.0.1-4+b1) ... Setting up libopenmpi3:amd64 (4.1.6-5) ... Setting up openmpi-bin (4.1.6-5) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up mpi-default-bin (1.15) ... Setting up mrbayes-mpi (3.2.7a-7+b1) ... Processing triggers for libc-bin (2.37-18) ... 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', '-y', 'install', 'mrbayes-mpi=3.2.7a-7+b1'] 0m31.0s INFO: Running scripts post_install 0m31.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_install_exceptions'] 0m31.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_install_exceptions'] 0m31.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m31.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m32.7s ERROR: WARN: Broken symlinks: /etc/vconsole.conf -> default/keyboard /etc/default/locale -> ../locale.conf 0m32.7s INFO: /bin converted to /usr/bin by /usr merge 0m32.7s INFO: /lib converted to /usr/lib by /usr merge 0m32.7s INFO: /lib/runit-helper converted to /usr/lib/runit-helper by /usr merge 0m32.7s INFO: /lib/systemd converted to /usr/lib/systemd by /usr merge 0m32.7s INFO: /lib/systemd/system converted to /usr/lib/systemd/system by /usr merge 0m32.7s INFO: /lib/udev converted to /usr/lib/udev by /usr merge 0m32.7s INFO: /lib/udev/rules.d converted to /usr/lib/udev/rules.d by /usr merge 0m32.7s INFO: /lib/x86_64-linux-gnu converted to /usr/lib/x86_64-linux-gnu by /usr merge 0m32.7s INFO: /lib/x86_64-linux-gnu/security converted to /usr/lib/x86_64-linux-gnu/security by /usr merge 0m32.7s INFO: /lib64 converted to /usr/lib64 by /usr merge 0m32.7s INFO: /sbin converted to /usr/sbin by /usr merge 0m33.3s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', '-ac', '--ignore-obsolete'] 0m35.9s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', '-ac', '--ignore-obsolete'] 0m35.9s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.9s DUMP: 0.15.6 0m35.9s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m35.9s INFO: Running adequate version 0.15.6 now. 0m35.9s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'mrbayes-mpi'] 0m36.0s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'mrbayes-mpi'] 0m36.0s INFO: Running scripts pre_remove 0m36.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m36.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m36.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m36.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m36.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m39.2s DUMP: UNOWNED SYMLINK /usr/lib/x86_64-linux-gnu/libmpi_usempi_ignore_tkr-gfortranso.40 -> libmpi_usempi_ignore_tkr-gfortran.so.40.30.0 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m39.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m39.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m39.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m39.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_exceptions'] 0m39.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/pre_remove_exceptions'] 0m39.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m39.4s DUMP: install ok installed adduser adduser 3.137 install ok installed apt apt 2.7.12 install ok installed base-files base-files 13.1 install ok installed base-passwd base-passwd 3.6.3 install ok installed bash bash 5.2.21-2 install ok installed bsdutils bsdutils 1:2.39.3-6 install ok installed coreutils coreutils 9.4-3+b1 install ok installed dash dash 0.5.12-6 install ok installed dbus dbus 1.14.10-4 install ok installed dbus-bin dbus-bin 1.14.10-4 install ok installed dbus-daemon dbus-daemon 1.14.10-4 install ok installed dbus-session-bus-common dbus-session-bus-common 1.14.10-4 install ok installed dbus-system-bus-common dbus-system-bus-common 1.14.10-4 install ok installed dbus-user-session dbus-user-session 1.14.10-4 install ok installed debconf debconf 1.5.86 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.17 install ok installed diffutils diffutils 1:3.10-1 install ok installed dmsetup dmsetup 2:1.02.196-1+b1 install ok installed dpkg dpkg 1.22.6 install ok installed e2fsprogs e2fsprogs 1.47.0-2+b1 install ok installed findutils findutils 4.9.0-5 install ok installed gcc-14-base:amd64 gcc-14-base 14-20240330-1 install ok installed gpgv gpgv 2.2.40-1.1+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed ibverbs-providers:amd64 ibverbs-providers 48.0-1.1 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed krb5-locales krb5-locales 1.20.1-5 install ok installed libacl1:amd64 libacl1 2.3.2-1 install ok installed libapparmor1:amd64 libapparmor1 3.0.13-2 install ok installed libapt-pkg6.0:amd64 libapt-pkg6.0 2.7.12 install ok installed libargon2-1:amd64 libargon2-1 0~20190702+dfsg-4+b1 install ok installed libatomic1:amd64 libatomic1 14-20240330-1 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-2 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-2 install ok installed libblkid1:amd64 libblkid1 2.39.3-6 install ok installed libbsd0:amd64 libbsd0 0.12.2-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-5.1 install ok installed libc-bin libc-bin 2.37-18 install ok installed libc6:amd64 libc6 2.37-18 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-1 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcbor0.10:amd64 libcbor0.10 0.10.2-1.1 install ok installed libclang-common-17-dev libclang-common-17-dev 1:17.0.6-5 install ok installed libclang-cpp17 libclang-cpp17 1:17.0.6-5 install ok installed libclang-rt-17-dev:amd64 libclang-rt-17-dev 1:17.0.6-5 install ok installed libclc-17 libclc-17 1:17.0.6-5 install ok installed libclc-17-dev libclc-17-dev 1:17.0.6-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.0-2+b1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-4 install ok installed libcryptsetup12:amd64 libcryptsetup12 2:2.6.1-6+b1 install ok installed libdb5.3:amd64 libdb5.3 5.3.28+dfsg2-4+b1 install ok installed libdbus-1-3:amd64 libdbus-1-3 1.14.10-4 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.271+b1 install ok installed libdevmapper1.02.1:amd64 libdevmapper1.02.1 2:1.02.196-1+b1 install ok installed libdrm-amdgpu1:amd64 libdrm-amdgpu1 2.4.120-2 install ok installed libdrm-common libdrm-common 2.4.120-2 install ok installed libdrm-nouveau2:amd64 libdrm-nouveau2 2.4.120-2 install ok installed libdrm-radeon1:amd64 libdrm-radeon1 2.4.120-2 install ok installed libdrm2:amd64 libdrm2 2.4.120-2 install ok installed libedit2:amd64 libedit2 3.1-20230828-1 install ok installed libelf1:amd64 libelf1 0.190-1+b1 install ok installed libevent-core-2.1-7:amd64 libevent-core-2.1-7 2.1.12-stable-8 install ok installed libevent-pthreads-2.1-7:amd64 libevent-pthreads-2.1-7 2.1.12-stable-8 install ok installed libexpat1:amd64 libexpat1 2.6.2-1 install ok installed libext2fs2:amd64 libext2fs2 1.47.0-2+b1 install ok installed libfabric1:amd64 libfabric1 1.17.0-3 install ok installed libfdisk1:amd64 libfdisk1 2.39.3-6 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libfido2-1:amd64 libfido2-1 1.14.0-1 install ok installed libgcc-s1:amd64 libgcc-s1 14-20240330-1 install ok installed libgcrypt20:amd64 libgcrypt20 1.10.3-2 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30:amd64 libgnutls30 3.8.3-1 install ok installed libgpg-error0:amd64 libgpg-error0 1.47-3 install ok installed libgpm2:amd64 libgpm2 1.20.7-11 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.20.1-5+b1 install ok installed libhmsbeagle1v5:amd64 libhmsbeagle1v5 3.1.2+dfsg-13 install ok installed libhogweed6:amd64 libhogweed6 3.9.1-2+b1 install ok installed libhwloc-plugins:amd64 libhwloc-plugins 2.10.0-1+b1 install ok installed libhwloc15:amd64 libhwloc15 2.10.0-1+b1 install ok installed libibverbs1:amd64 libibverbs1 48.0-1.1 install ok installed libicu72:amd64 libicu72 72.1-4+b1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libjson-c5:amd64 libjson-c5 0.17-1+b1 install ok installed libk5crypto3:amd64 libk5crypto3 1.20.1-5+b1 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-3 install ok installed libkmod2:amd64 libkmod2 31+20240202-2 install ok installed libkrb5-3:amd64 libkrb5-3 1.20.1-5+b1 install ok installed libkrb5support0:amd64 libkrb5support0 1.20.1-5+b1 install ok installed libllvm17:amd64 libllvm17 1:17.0.6-5 install ok installed libllvmspirvlib17:amd64 libllvmspirvlib17 17.0.0-4 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-2 install ok installed liblzma5:amd64 liblzma5 5.6.1+really5.4.5-1 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.39.3-6 install ok installed libmunge2:amd64 libmunge2 0.5.15-4 install ok installed libncursesw6:amd64 libncursesw6 6.4+20240414-1 install ok installed libnettle8:amd64 libnettle8 3.9.1-2+b1 install ok installed libnl-3-200:amd64 libnl-3-200 3.7.0-0.3 install ok installed libnl-route-3-200:amd64 libnl-route-3-200 3.7.0-0.3 install ok installed libnss-systemd:amd64 libnss-systemd 255.4-1 install ok installed libnuma1:amd64 libnuma1 2.0.18-1 install ok installed libopenmpi3:amd64 libopenmpi3 4.1.6-5 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.3-4 install ok installed libpam-modules:amd64 libpam-modules 1.5.2-9.1+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.5.2-9.1+b1 install ok installed libpam-runtime libpam-runtime 1.5.2-9.1 install ok installed libpam-systemd:amd64 libpam-systemd 255.4-1 install ok installed libpam0g:amd64 libpam0g 1.5.2-9.1+b1 install ok installed libpciaccess0:amd64 libpciaccess0 0.17-3 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libpmix2:amd64 libpmix2 5.0.1-4+b1 install ok installed libproc2-0:amd64 libproc2-0 2:4.0.4-4 install ok installed libpsm-infinipath1 libpsm-infinipath1 3.3+20.604758e7-6.3 install ok installed libpsm2-2 libpsm2-2 11.2.185-2 install ok installed librdmacm1:amd64 librdmacm1 48.0-1.1 install ok installed libreadline8t64:amd64 libreadline8t64 8.2-4 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1 install ok installed libselinux1:amd64 libselinux1 3.5-2 install ok installed libsemanage-common libsemanage-common 3.5-1 install ok installed libsemanage2:amd64 libsemanage2 3.5-1+b2 install ok installed libsepol2:amd64 libsepol2 3.5-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.39.3-6 install ok installed libss2:amd64 libss2 1.47.0-2+b1 install ok installed libssl3:amd64 libssl3 3.1.5-1 install ok installed libstdc++6:amd64 libstdc++6 14-20240330-1 install ok installed libsystemd-shared:amd64 libsystemd-shared 255.4-1 install ok installed libsystemd0:amd64 libsystemd0 255.4-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.4+20240414-1 install ok installed libucx0:amd64 libucx0 1.15.0-1 install ok installed libudev1:amd64 libudev1 255.4-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.39.3-6 install ok installed libwrap0:amd64 libwrap0 7.6.q-33 install ok installed libx11-6:amd64 libx11-6 2:1.8.7-1 install ok installed libx11-data libx11-data 2:1.8.7-1 install ok installed libxau6:amd64 libxau6 1:1.0.9-1 install ok installed libxcb1:amd64 libxcb1 1.15-1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b1 install ok installed libxml2:amd64 libxml2 2.9.14+dfsg-1.3+b2 install ok installed libxmuu1:amd64 libxmuu1 2:1.1.3-3 install ok installed libxnvctrl0:amd64 libxnvctrl0 535.171.04-1 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libz3-4:amd64 libz3-4 4.8.12-3.1+b2 install ok installed libzstd1:amd64 libzstd1 1.5.5+dfsg2-2 install ok installed login login 1:4.13+dfsg1-4 install ok installed logsave logsave 1.47.0-2+b1 install ok installed mawk mawk 1.3.4.20240123-1 install ok installed mesa-opencl-icd:amd64 mesa-opencl-icd 23.3.5-1 install ok installed mount mount 2.39.3-6 install ok installed mpi-default-bin mpi-default-bin 1.15 install ok installed mrbayes-mpi mrbayes-mpi 3.2.7a-7+b1 install ok installed ncurses-base ncurses-base 6.4+20240414-1 install ok installed ncurses-bin ncurses-bin 6.4+20240414-1 install ok installed ncurses-term ncurses-term 6.4+20240414-1 install ok installed ocl-icd-libopencl1:amd64 ocl-icd-libopencl1 2.3.2-1+b1 install ok installed openmpi-bin openmpi-bin 4.1.6-5 install ok installed openmpi-common openmpi-common 4.1.6-5 install ok installed openssh-client openssh-client 1:9.6p1-4 install ok installed openssh-server openssh-server 1:9.6p1-4 install ok installed openssh-sftp-server openssh-sftp-server 1:9.6p1-4 install ok installed passwd passwd 1:4.13+dfsg1-4 install ok installed perl-base perl-base 5.38.2-3 install ok installed procps procps 2:4.0.4-4 install ok installed psmisc psmisc 23.7-1 install ok installed readline-common readline-common 8.2-4 install ok installed runit-helper runit-helper 2.16.2 install ok installed sed sed 4.9-2 install ok installed sensible-utils sensible-utils 0.0.22 install ok installed ssh ssh 1:9.6p1-4 install ok installed systemd systemd 255.4-1 install ok installed systemd-dev systemd-dev 255.4-1 install ok installed systemd-sysv systemd-sysv 255.4-1 install ok installed systemd-timesyncd systemd-timesyncd 255.4-1 install ok installed sysvinit-utils sysvinit-utils 3.08-7 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-1 install ok installed ucf ucf 3.0043+nmu1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.39.3-6 install ok installed xauth xauth 1:1.1.2-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg-3+b1 0m39.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m39.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', 'remove', 'adduser', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dmsetup', 'ibverbs-providers:amd64', 'krb5-locales', 'libapparmor1:amd64', 'libargon2-1:amd64', 'libatomic1:amd64', 'libbsd0:amd64', 'libcbor0.10:amd64', 'libclang-common-17-dev', 'libclang-cpp17', 'libclang-rt-17-dev:amd64', 'libclc-17', 'libclc-17-dev', 'libcryptsetup12:amd64', 'libdbus-1-3:amd64', 'libdevmapper1.02.1:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libevent-core-2.1-7:amd64', 'libevent-pthreads-2.1-7:amd64', 'libexpat1:amd64', 'libfabric1:amd64', 'libfdisk1:amd64', 'libfido2-1:amd64', 'libgpm2:amd64', 'libgssapi-krb5-2:amd64', 'libhmsbeagle1v5:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibverbs1:amd64', 'libicu72:amd64', 'libjson-c5:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libllvm17:amd64', 'libllvmspirvlib17:amd64', 'libmunge2:amd64', 'libncursesw6:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnss-systemd:amd64', 'libnuma1:amd64', 'libopenmpi3:amd64', 'libpam-systemd:amd64', 'libpciaccess0:amd64', 'libpmix2:amd64', 'libproc2-0:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'librdmacm1:amd64', 'libreadline8t64:amd64', 'libsystemd-shared:amd64', 'libucx0:amd64', 'libwrap0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxmuu1:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'mesa-opencl-icd:amd64', 'mpi-default-bin', 'ncurses-term', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssh-server', 'openssh-sftp-server', 'procps', 'psmisc', 'readline-common', 'runit-helper', 'sensible-utils', 'ssh', 'systemd', 'systemd-dev', 'systemd-sysv', 'systemd-timesyncd', 'ucf', 'xauth', 'mrbayes-mpi'] 0m41.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: adduser dbus dbus-bin dbus-daemon dbus-session-bus-common dbus-system-bus-common dbus-user-session dmsetup ibverbs-providers krb5-locales libapparmor1 libargon2-1 libatomic1 libbsd0 libcbor0.10 libclang-common-17-dev libclang-cpp17 libclang-rt-17-dev libclc-17 libclc-17-dev libcryptsetup12 libdbus-1-3 libdevmapper1.02.1 libdrm-amdgpu1 libdrm-common libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libevent-core-2.1-7 libevent-pthreads-2.1-7 libexpat1 libfabric1 libfdisk1 libfido2-1 libgpm2 libgssapi-krb5-2 libhmsbeagle1v5 libhwloc-plugins libhwloc15 libibverbs1 libicu72 libjson-c5 libk5crypto3 libkeyutils1 libkmod2 libkrb5-3 libkrb5support0 libllvm17 libllvmspirvlib17 libmunge2 libncursesw6 libnl-3-200 libnl-route-3-200 libnss-systemd libnuma1 libopenmpi3 libpam-systemd libpciaccess0 libpmix2 libproc2-0 libpsm-infinipath1 libpsm2-2 librdmacm1 libreadline8t64 libsystemd-shared libucx0 libwrap0 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxml2 libxmuu1 libxnvctrl0 libz3-4 mesa-opencl-icd mpi-default-bin mrbayes-mpi ncurses-term ocl-icd-libopencl1 openmpi-bin openmpi-common openssh-client openssh-server openssh-sftp-server procps psmisc readline-common runit-helper sensible-utils ssh systemd systemd-dev systemd-sysv systemd-timesyncd ucf xauth 0 upgraded, 0 newly installed, 101 to remove and 0 not upgraded. After this operation, 566 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11804 files and directories currently installed.) Removing mrbayes-mpi (3.2.7a-7+b1) ... Removing mpi-default-bin (1.15) ... Removing openmpi-bin (4.1.6-5) ... Removing libopenmpi3:amd64 (4.1.6-5) ... Removing libucx0:amd64 (1.15.0-1) ... Removing libfabric1:amd64 (1.17.0-3) ... Removing librdmacm1:amd64 (48.0-1.1) ... Removing ssh (1:9.6p1-4) ... Removing openssh-server (1:9.6p1-4) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of stop. Removing dbus-user-session (1.14.10-4) ... Removing libpam-systemd:amd64 (255.4-1) ... dpkg: warning: while removing libpam-systemd:amd64, directory '/usr/lib/x86_64-linux-gnu/security' not empty so not removed Removing dbus (1.14.10-4) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of stop. Removing dbus-daemon (1.14.10-4) ... Removing dbus-bin (1.14.10-4) ... Removing dbus-session-bus-common (1.14.10-4) ... Removing dbus-system-bus-common (1.14.10-4) ... Removing systemd-timesyncd (255.4-1) ... Removing systemd-sysv (255.4-1) ... Removing ibverbs-providers:amd64 (48.0-1.1) ... Removing krb5-locales (1.20.1-5) ... Removing libatomic1:amd64 (14-20240330-1) ... Removing xauth (1:1.1.2-1) ... Removing libpmix2:amd64 (5.0.1-4+b1) ... Removing libhwloc-plugins:amd64 (2.10.0-1+b1) ... Removing libxnvctrl0:amd64 (535.171.04-1) ... Removing openssh-sftp-server (1:9.6p1-4) ... Removing openssh-client (1:9.6p1-4) ... Removing libfido2-1:amd64 (1.14.0-1) ... Removing libcbor0.10:amd64 (0.10.2-1.1) ... Removing libhmsbeagle1v5:amd64 (3.1.2+dfsg-13) ... Removing mesa-opencl-icd:amd64 (23.3.5-1) ... Removing libclc-17 (1:17.0.6-5) ... Removing libclang-common-17-dev (1:17.0.6-5) ... Removing libclang-cpp17 (1:17.0.6-5) ... Removing libclang-rt-17-dev:amd64 (1:17.0.6-5) ... Removing libclc-17-dev (1:17.0.6-5) ... Removing libdbus-1-3:amd64 (1.14.10-4) ... Removing libdrm-amdgpu1:amd64 (2.4.120-2) ... Removing libdrm-radeon1:amd64 (2.4.120-2) ... Removing libdrm-nouveau2:amd64 (2.4.120-2) ... Removing libdrm2:amd64 (2.4.120-2) ... Removing libdrm-common (2.4.120-2) ... Removing libllvmspirvlib17:amd64 (17.0.0-4) ... Removing libllvm17:amd64 (1:17.0.6-5) ... Removing libelf1:amd64 (0.190-1+b1) ... Removing libevent-pthreads-2.1-7:amd64 (2.1.12-stable-8) ... Removing libevent-core-2.1-7:amd64 (2.1.12-stable-8) ... Removing libexpat1:amd64 (2.6.2-1) ... Removing libgpm2:amd64 (1.20.7-11) ... Removing libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... Removing libhwloc15:amd64 (2.10.0-1+b1) ... Removing libxml2:amd64 (2.9.14+dfsg-1.3+b2) ... Removing libicu72:amd64 (72.1-4+b1) ... Removing libkrb5-3:amd64 (1.20.1-5+b1) ... Removing libk5crypto3:amd64 (1.20.1-5+b1) ... Removing libkeyutils1:amd64 (1.6.3-3) ... Removing libkrb5support0:amd64 (1.20.1-5+b1) ... Removing libmunge2:amd64 (0.5.15-4) ... Removing procps (2:4.0.4-4) ... Removing libncursesw6:amd64 (6.4+20240414-1) ... Removing libnss-systemd:amd64 (255.4-1) ... Removing libpsm2-2 (11.2.185-2) ... Removing libnuma1:amd64 (2.0.18-1) ... Removing libpciaccess0:amd64 (0.17-3) ... Removing libproc2-0:amd64 (2:4.0.4-4) ... Removing libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: warning: alternative /usr/lib/libpsm1/libpsm_infinipath.so.1.16 (part of link group libpsm_infinipath.so.1) doesn't exist; removing from list of alternatives update-alternatives: warning: /etc/alternatives/libpsm_infinipath.so.1 is dangling; it will be updated with best choice Removing libreadline8t64:amd64 (8.2-4) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libwrap0:amd64 (7.6.q-33) ... Removing libxext6:amd64 (2:1.3.4-1+b1) ... Removing libxmuu1:amd64 (2:1.1.3-3) ... Removing libz3-4:amd64 (4.8.12-3.1+b2) ... Removing ncurses-term (6.4+20240414-1) ... Removing ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Removing openmpi-common (4.1.6-5) ... Removing psmisc (23.7-1) ... Removing readline-common (8.2-4) ... Removing runit-helper (2.16.2) ... Removing ucf (3.0043+nmu1) ... Removing sensible-utils (0.0.22) ... Removing libibverbs1:amd64 (48.0-1.1) ... Removing adduser (3.137) ... Removing systemd (255.4-1) ... Removing libcryptsetup12:amd64 (2:2.6.1-6+b1) ... Removing libsystemd-shared:amd64 (255.4-1) ... Removing libapparmor1:amd64 (3.0.13-2) ... Removing libargon2-1:amd64 (0~20190702+dfsg-4+b1) ... Removing libx11-6:amd64 (2:1.8.7-1) ... Removing libxcb1:amd64 (1.15-1) ... Removing libxdmcp6:amd64 (1:1.1.2-3) ... Removing libedit2:amd64 (3.1-20230828-1) ... Removing libbsd0:amd64 (0.12.2-1) ... Removing libfdisk1:amd64 (2.39.3-6) ... Removing libjson-c5:amd64 (0.17-1+b1) ... Removing libkmod2:amd64 (31+20240202-2) ... Removing libnl-route-3-200:amd64 (3.7.0-0.3) ... Removing libnl-3-200:amd64 (3.7.0-0.3) ... Removing libx11-data (2:1.8.7-1) ... Removing libxau6:amd64 (1:1.0.9-1) ... Removing systemd-dev (255.4-1) ... Removing dmsetup (2:1.02.196-1+b1) ... dpkg: warning: while removing dmsetup, directory '/usr/lib/udev/rules.d' not empty so not removed Removing libdevmapper1.02.1:amd64 (2:1.02.196-1+b1) ... Processing triggers for libc-bin (2.37-18) ... 0m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', 'remove', 'adduser', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dmsetup', 'ibverbs-providers:amd64', 'krb5-locales', 'libapparmor1:amd64', 'libargon2-1:amd64', 'libatomic1:amd64', 'libbsd0:amd64', 'libcbor0.10:amd64', 'libclang-common-17-dev', 'libclang-cpp17', 'libclang-rt-17-dev:amd64', 'libclc-17', 'libclc-17-dev', 'libcryptsetup12:amd64', 'libdbus-1-3:amd64', 'libdevmapper1.02.1:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libevent-core-2.1-7:amd64', 'libevent-pthreads-2.1-7:amd64', 'libexpat1:amd64', 'libfabric1:amd64', 'libfdisk1:amd64', 'libfido2-1:amd64', 'libgpm2:amd64', 'libgssapi-krb5-2:amd64', 'libhmsbeagle1v5:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibverbs1:amd64', 'libicu72:amd64', 'libjson-c5:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libllvm17:amd64', 'libllvmspirvlib17:amd64', 'libmunge2:amd64', 'libncursesw6:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnss-systemd:amd64', 'libnuma1:amd64', 'libopenmpi3:amd64', 'libpam-systemd:amd64', 'libpciaccess0:amd64', 'libpmix2:amd64', 'libproc2-0:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'librdmacm1:amd64', 'libreadline8t64:amd64', 'libsystemd-shared:amd64', 'libucx0:amd64', 'libwrap0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxmuu1:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'mesa-opencl-icd:amd64', 'mpi-default-bin', 'ncurses-term', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssh-server', 'openssh-sftp-server', 'procps', 'psmisc', 'readline-common', 'runit-helper', 'sensible-utils', 'ssh', 'systemd', 'systemd-dev', 'systemd-sysv', 'systemd-timesyncd', 'ucf', 'xauth', 'mrbayes-mpi'] 0m41.5s INFO: Running scripts post_remove 0m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_remove_exceptions'] 0m41.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_remove_exceptions'] 0m41.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg', '--purge', 'adduser', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dmsetup', 'ibverbs-providers:amd64', 'krb5-locales', 'libapparmor1:amd64', 'libargon2-1:amd64', 'libatomic1:amd64', 'libbsd0:amd64', 'libcbor0.10:amd64', 'libclang-common-17-dev', 'libclang-cpp17', 'libclang-rt-17-dev:amd64', 'libclc-17', 'libclc-17-dev', 'libcryptsetup12:amd64', 'libdbus-1-3:amd64', 'libdevmapper1.02.1:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libevent-core-2.1-7:amd64', 'libevent-pthreads-2.1-7:amd64', 'libexpat1:amd64', 'libfabric1:amd64', 'libfdisk1:amd64', 'libfido2-1:amd64', 'libgpm2:amd64', 'libgssapi-krb5-2:amd64', 'libhmsbeagle1v5:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibverbs1:amd64', 'libicu72:amd64', 'libjson-c5:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libllvm17:amd64', 'libllvmspirvlib17:amd64', 'libmunge2:amd64', 'libncursesw6:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnss-systemd:amd64', 'libnuma1:amd64', 'libopenmpi3:amd64', 'libpam-systemd:amd64', 'libpciaccess0:amd64', 'libpmix2:amd64', 'libproc2-0:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'librdmacm1:amd64', 'libreadline8t64:amd64', 'libsystemd-shared:amd64', 'libucx0:amd64', 'libwrap0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxmuu1:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'mesa-opencl-icd:amd64', 'mpi-default-bin', 'ncurses-term', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssh-server', 'openssh-sftp-server', 'procps', 'psmisc', 'readline-common', 'runit-helper', 'sensible-utils', 'ssh', 'systemd', 'systemd-dev', 'systemd-sysv', 'systemd-timesyncd', 'ucf', 'xauth'] 0m42.4s DUMP: (Reading database ... 5302 files and directories currently installed.) Purging configuration files for adduser (3.137) ... Purging configuration files for dbus (1.14.10-4) ... rmdir: failed to remove '/var/run/dbus': Directory not empty rmdir: failed to remove '/var/lib/dbus': Directory not empty dpkg: warning: while removing dbus, directory '/var/lib/dbus' not empty so not removed dpkg: warning: ignoring request to remove dbus-bin which isn't installed Purging configuration files for dbus-daemon (1.14.10-4) ... dpkg: warning: ignoring request to remove dbus-session-bus-common which isn't installed dpkg: warning: ignoring request to remove dbus-system-bus-common which isn't installed Purging configuration files for dbus-user-session (1.14.10-4) ... dpkg: warning: ignoring request to remove dmsetup which isn't installed Purging configuration files for ibverbs-providers:amd64 (48.0-1.1) ... dpkg: warning: ignoring request to remove krb5-locales which isn't installed dpkg: warning: ignoring request to remove libapparmor1 which isn't installed dpkg: warning: ignoring request to remove libargon2-1 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libbsd0 which isn't installed dpkg: warning: ignoring request to remove libcbor0.10 which isn't installed dpkg: warning: ignoring request to remove libclang-common-17-dev which isn't installed dpkg: warning: ignoring request to remove libclang-cpp17 which isn't installed dpkg: warning: ignoring request to remove libclang-rt-17-dev which isn't installed dpkg: warning: ignoring request to remove libclc-17 which isn't installed dpkg: warning: ignoring request to remove libclc-17-dev which isn't installed dpkg: warning: ignoring request to remove libcryptsetup12 which isn't installed dpkg: warning: ignoring request to remove libdbus-1-3 which isn't installed dpkg: warning: ignoring request to remove libdevmapper1.02.1 which isn't installed dpkg: warning: ignoring request to remove libdrm-amdgpu1 which isn't installed dpkg: warning: ignoring request to remove libdrm-common which isn't installed dpkg: warning: ignoring request to remove libdrm-nouveau2 which isn't installed dpkg: warning: ignoring request to remove libdrm-radeon1 which isn't installed dpkg: warning: ignoring request to remove libdrm2 which isn't installed dpkg: warning: ignoring request to remove libedit2 which isn't installed dpkg: warning: ignoring request to remove libelf1 which isn't installed dpkg: warning: ignoring request to remove libevent-core-2.1-7 which isn't installed dpkg: warning: ignoring request to remove libevent-pthreads-2.1-7 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfabric1 which isn't installed dpkg: warning: ignoring request to remove libfdisk1 which isn't installed dpkg: warning: ignoring request to remove libfido2-1 which isn't installed dpkg: warning: ignoring request to remove libgpm2 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.20.1-5+b1) ... dpkg: warning: ignoring request to remove libhmsbeagle1v5 which isn't installed dpkg: warning: ignoring request to remove libhwloc-plugins which isn't installed dpkg: warning: ignoring request to remove libhwloc15 which isn't installed dpkg: warning: ignoring request to remove libibverbs1 which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libjson-c5 which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkmod2 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove libllvm17 which isn't installed dpkg: warning: ignoring request to remove libllvmspirvlib17 which isn't installed dpkg: warning: ignoring request to remove libmunge2 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed Purging configuration files for libnl-3-200:amd64 (3.7.0-0.3) ... dpkg: warning: ignoring request to remove libnl-route-3-200 which isn't installed Purging configuration files for libnss-systemd:amd64 (255.4-1) ... dpkg: warning: ignoring request to remove libnuma1 which isn't installed dpkg: warning: ignoring request to remove libopenmpi3 which isn't installed dpkg: warning: ignoring request to remove libpam-systemd which isn't installed dpkg: warning: ignoring request to remove libpciaccess0 which isn't installed dpkg: warning: ignoring request to remove libpmix2 which isn't installed dpkg: warning: ignoring request to remove libproc2-0 which isn't installed Purging configuration files for libpsm-infinipath1 (3.3+20.604758e7-6.3) ... dpkg: warning: ignoring request to remove libpsm2-2 which isn't installed dpkg: warning: ignoring request to remove librdmacm1 which isn't installed Purging configuration files for libreadline8t64:amd64 (8.2-4) ... dpkg: warning: ignoring request to remove libsystemd-shared which isn't installed dpkg: warning: ignoring request to remove libucx0 which isn't installed Purging configuration files for libwrap0:amd64 (7.6.q-33) ... dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxmuu1 which isn't installed dpkg: warning: ignoring request to remove libxnvctrl0 which isn't installed dpkg: warning: ignoring request to remove libz3-4 which isn't installed Purging configuration files for mesa-opencl-icd:amd64 (23.3.5-1) ... dpkg: warning: ignoring request to remove mpi-default-bin which isn't installed dpkg: warning: ignoring request to remove ncurses-term which isn't installed dpkg: warning: ignoring request to remove ocl-icd-libopencl1 which isn't installed Purging configuration files for openmpi-bin (4.1.6-5) ... dpkg: warning: ignoring request to remove openmpi-common which isn't installed Purging configuration files for openssh-client (1:9.6p1-4) ... Purging configuration files for openssh-server (1:9.6p1-4) ... dpkg: warning: ignoring request to remove openssh-sftp-server which isn't installed Purging configuration files for procps (2:4.0.4-4) ... dpkg: warning: ignoring request to remove psmisc which isn't installed Purging configuration files for readline-common (8.2-4) ... dpkg: warning: ignoring request to remove runit-helper which isn't installed dpkg: warning: ignoring request to remove sensible-utils which isn't installed dpkg: warning: ignoring request to remove ssh which isn't installed Purging configuration files for systemd (255.4-1) ... dpkg: warning: ignoring request to remove systemd-dev which isn't installed dpkg: warning: ignoring request to remove systemd-sysv which isn't installed Purging configuration files for systemd-timesyncd (255.4-1) ... Purging configuration files for ucf (3.0043+nmu1) ... dpkg: warning: ignoring request to remove xauth which isn't installed 0m42.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg', '--purge', 'adduser', 'dbus', 'dbus-bin', 'dbus-daemon', 'dbus-session-bus-common', 'dbus-system-bus-common', 'dbus-user-session', 'dmsetup', 'ibverbs-providers:amd64', 'krb5-locales', 'libapparmor1:amd64', 'libargon2-1:amd64', 'libatomic1:amd64', 'libbsd0:amd64', 'libcbor0.10:amd64', 'libclang-common-17-dev', 'libclang-cpp17', 'libclang-rt-17-dev:amd64', 'libclc-17', 'libclc-17-dev', 'libcryptsetup12:amd64', 'libdbus-1-3:amd64', 'libdevmapper1.02.1:amd64', 'libdrm-amdgpu1:amd64', 'libdrm-common', 'libdrm-nouveau2:amd64', 'libdrm-radeon1:amd64', 'libdrm2:amd64', 'libedit2:amd64', 'libelf1:amd64', 'libevent-core-2.1-7:amd64', 'libevent-pthreads-2.1-7:amd64', 'libexpat1:amd64', 'libfabric1:amd64', 'libfdisk1:amd64', 'libfido2-1:amd64', 'libgpm2:amd64', 'libgssapi-krb5-2:amd64', 'libhmsbeagle1v5:amd64', 'libhwloc-plugins:amd64', 'libhwloc15:amd64', 'libibverbs1:amd64', 'libicu72:amd64', 'libjson-c5:amd64', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkmod2:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'libllvm17:amd64', 'libllvmspirvlib17:amd64', 'libmunge2:amd64', 'libncursesw6:amd64', 'libnl-3-200:amd64', 'libnl-route-3-200:amd64', 'libnss-systemd:amd64', 'libnuma1:amd64', 'libopenmpi3:amd64', 'libpam-systemd:amd64', 'libpciaccess0:amd64', 'libpmix2:amd64', 'libproc2-0:amd64', 'libpsm-infinipath1', 'libpsm2-2', 'librdmacm1:amd64', 'libreadline8t64:amd64', 'libsystemd-shared:amd64', 'libucx0:amd64', 'libwrap0:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxml2:amd64', 'libxmuu1:amd64', 'libxnvctrl0:amd64', 'libz3-4:amd64', 'mesa-opencl-icd:amd64', 'mpi-default-bin', 'ncurses-term', 'ocl-icd-libopencl1:amd64', 'openmpi-bin', 'openmpi-common', 'openssh-client', 'openssh-server', 'openssh-sftp-server', 'procps', 'psmisc', 'readline-common', 'runit-helper', 'sensible-utils', 'ssh', 'systemd', 'systemd-dev', 'systemd-sysv', 'systemd-timesyncd', 'ucf', 'xauth'] 0m42.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg', '--purge', 'mrbayes-mpi'] 0m42.4s DUMP: dpkg: warning: ignoring request to remove mrbayes-mpi which isn't installed 0m42.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg', '--purge', 'mrbayes-mpi'] 0m42.4s INFO: Running scripts post_purge 0m42.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_purge_exceptions'] 0m42.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_purge_exceptions'] 0m42.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg', '--purge', '--pending'] 0m42.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg', '--purge', '--pending'] 0m42.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg', '--remove', '--pending'] 0m42.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg', '--remove', '--pending'] 0m42.5s INFO: Running scripts post_test 0m42.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_test_exceptions'] 0m42.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'tmp/scripts/post_test_exceptions'] 0m42.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m42.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m43.2s ERROR: WARN: Broken symlinks: /etc/vconsole.conf -> default/keyboard /etc/default/locale -> ../locale.conf /usr/lib/x86_64-linux-gnu/libmpi_usempi_ignore_tkr-gfortranso.40 -> libmpi_usempi_ignore_tkr-gfortran.so.40.30.0 0m43.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg-divert', '--list'] 0m43.2s DUMP: local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged local diversion of /home to /home.distrib local diversion of /usr/bin/sync to /usr/bin/sync.distrib 0m43.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'dpkg-divert', '--list'] 0m43.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', 'clean'] 0m43.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7', 'apt-get', 'clean'] 0m43.3s DEBUG: Recording chroot state 0m43.8s INFO: Warning: Package purging left files on system: /etc/default/locale -> ../locale.conf not owned /etc/vconsole.conf -> default/keyboard not owned /root/.ssh/ not owned /usr/lib/x86_64-linux-gnu/libmpi_usempi_ignore_tkr-gfortranso.40 -> libmpi_usempi_ignore_tkr-gfortran.so.40.30.0 not owned /var/cache/private/ not owned /var/lib/private/ not owned /var/lib/systemd/coredump/ not owned /var/lib/systemd/ephemeral-trees/ not owned /var/lib/systemd/pstore/ not owned /var/log/private/ not owned 0m43.8s INFO: PASS: Installation and purging test. 0m44.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/shm'] 0m44.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/shm'] 0m44.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/console'] 0m44.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/console'] 0m44.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/ptmx'] 0m44.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/ptmx'] 0m44.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/pts'] 0m44.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/dev/pts'] 0m44.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/proc'] 0m44.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7/proc'] 0m44.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m44.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpgbejxbz7'] 0m44.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpgbejxbz7 0m44.3s INFO: PASS: All tests. 0m44.3s INFO: piuparts run ends. ret=0 End: 2024-04-24 16:37:42 GMT