Start: 2024-09-25 04:16:42 GMT Package: python3-cobra Source: python-cobra Version: 0.29.1-1 Installed-Size: 1877 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: python3-depinfo, python3-diskcache, python3-httpx, python3-importlib-resources, python3-numpy, python3-optlang (>= 1.7.0-1~), python3-pandas, python3-platformdirs, python3-pydantic, python3-rich, python3-ruamel.yaml, python3-swiglpk (>= 5.0.8-1~), python3:any, python-cobra-data (= 0.29.1-1), python3-tabulate, python3-sbml5 Suggests: python3-matplotlib, qsopt-ex Description: constraint-based modeling of biological networks with Python 3 Homepage: https://opencobra.github.io/cobrapy/ Description-md5: 0052f98776eccb61924a15b5d6618e25 Section: python Priority: optional Filename: pool/main/p/python-cobra/python3-cobra_0.29.1-1_amd64.deb Size: 1119236 MD5sum: 4d48b6813dbb603a20ea4fd8ad145ff3 SHA256: ef5f54c3547145e50a549a78b4977494290bf100e2b7fe34480c5a0b4386eab2 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt python3-cobra=0.29.1-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.4.4~202408201642~1.4.3-11-g36a88c35 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz -d trixie --no-upgrade-test --apt python3-cobra=0.29.1-1 0m0.0s INFO: Running on: Linux piu-slave-conova-01 5.10.0-32-amd64 #1 SMP Debian 5.10.223-1 (2024-08-10) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpiltrgohb 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpiltrgohb 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', '--auto-compress', '-xf', '/srv/piuparts.debian.org/slave/basetgz/trixie-merged-usr_amd64.tar.gz'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/proc'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/proc'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/pts'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/pts'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/ptmx'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/ptmx'] 0m0.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/console'] 0m0.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/5', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/console'] 0m0.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/shm'] 0m0.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/shm'] 0m0.3s DEBUG: sources.list: deb http://deb.debian.org/debian/ trixie main 0m0.4s DEBUG: Created policy-rc.d and chmodded it. 0m0.4s DEBUG: Created resolv.conf. 0m0.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpiltrgohb/tmp/scripts/ 0m0.4s INFO: Running scripts post_chroot_unpack 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m0.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', 'update'] 0m2.2s DUMP: Get:1 http://deb.debian.org/debian trixie InRelease [169 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 Packages [9303 kB] Get:3 http://deb.debian.org/debian trixie/main Translation-en [6200 kB] Fetched 15.7 MB in 1s (12.9 MB/s) Reading package lists... 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', 'update'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', '-yf', 'dist-upgrade'] 0m2.7s DUMP: Reading package lists... Building dependency tree... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m2.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', '-yf', 'dist-upgrade'] 0m2.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.2s DUMP: a7198c84b7488d561f402cabc7baa162 - 0m3.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.2s INFO: Running scripts post_setup 0m3.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_dummy_users'] 0m3.9s DUMP: useradd warning: dummy1000's uid 1000 is greater than SYS_UID_MAX 999 useradd warning: dummy1001's uid 1001 is greater than SYS_UID_MAX 999 useradd warning: dummy1002's uid 1002 is greater than SYS_UID_MAX 999 useradd warning: dummy1003's uid 1003 is greater than SYS_UID_MAX 999 useradd warning: dummy1004's uid 1004 is greater than SYS_UID_MAX 999 useradd warning: dummy1005's uid 1005 is greater than SYS_UID_MAX 999 useradd warning: dummy1006's uid 1006 is greater than SYS_UID_MAX 999 useradd warning: dummy1007's uid 1007 is greater than SYS_UID_MAX 999 useradd warning: dummy1008's uid 1008 is greater than SYS_UID_MAX 999 useradd warning: dummy1009's uid 1009 is greater than SYS_UID_MAX 999 useradd warning: dummy1010's uid 1010 is greater than SYS_UID_MAX 999 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_dummy_users'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_forbid_home'] 0m3.9s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m3.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_forbid_home'] 0m3.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.0s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /usr/bin/sync to /usr/bin/sync.distrib' Adding 'local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged' '/bin/sync' -> 'true' 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_minimize'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_minimize'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_zz_backports'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_setup_zz_backports'] 0m4.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', 'clean'] 0m4.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', 'clean'] 0m4.0s DEBUG: Recording chroot state 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.7s DUMP: install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed bsdutils bsdutils 1:2.40.2-8 install ok installed coreutils coreutils 9.4-3.1 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-3 install ok installed gpgv gpgv 2.2.43-8+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libblkid1:amd64 libblkid1 2.40.2-8 install ok installed libbsd0:amd64 libbsd0 0.12.2-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-2 install ok installed libc6:amd64 libc6 2.40-2 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-8 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-8 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-3 install ok installed libsystemd0:amd64 libsystemd0 256.6-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libudev1:amd64 libudev1 256.6-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-8 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed login login 1:4.16.0-2+really2.40.2-8 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed mount mount 2.40.2-8 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed sed sed 4.9-2 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tzdata tzdata 2024a-4 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-8 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg-divert', '--list'] 0m4.7s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg-divert', '--list'] 0m4.7s INFO: Running scripts is_testable 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/is_testable_uninstallable'] 0m4.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/is_testable_uninstallable'] 0m4.7s INFO: apt-cache does not know about any of the requested packages 0m4.7s INFO: Running scripts pre_test 0m4.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_test_exceptions'] 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_test_exceptions'] 0m4.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_test_root_password'] 0m4.8s DUMP: New password: Retype new password: passwd: password updated successfully 0m4.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_test_root_password'] 0m4.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 0m5.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 0m5.8s DEBUG: No broken symlinks as far as we can find. 0m5.8s INFO: Running scripts pre_install 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_database-server'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_database-server'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_exceptions'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_exceptions'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_extras'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_extras'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_foreign_architecture'] 0m5.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m5.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 0m6.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 0m6.8s DEBUG: No broken symlinks as far as we can find. 0m6.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-cache', 'policy'] 0m7.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://deb.debian.org/debian trixie/main amd64 Packages release o=Debian,a=testing,n=trixie,l=Debian,c=main,b=amd64 origin deb.debian.org Pinned packages: 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-cache', 'policy'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-cache', 'policy', 'python3-cobra'] 0m7.5s DUMP: python3-cobra: Installed: (none) Candidate: 0.29.1-1 Version table: 0.29.1-1 500 500 http://deb.debian.org/debian trixie/main amd64 Packages 0m7.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-cache', 'policy', 'python3-cobra'] 0m7.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', '-y', 'install', 'python3-cobra=0.29.1-1'] 1m2.9s DUMP: Reading package lists... Building dependency tree... The following additional packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu blt ca-certificates cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu isympy-common isympy3 javascript-common krb5-locales libaec0 libamd3 libasan8 libatomic1 libbinutils libblas3 libblosc1 libblosc2-4 libbrotli1 libc-dev-bin libc6-dev libcc1-0 libcolamd3 libcrypt-dev libctf-nobfd0 libctf0 libcurl4t64 libdeflate0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgcc-14-dev libgfortran5 libglib2.0-0t64 libglib2.0-data libglpk40 libgomp1 libgpm2 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhdf5-103-1t64 libhwasan0 libicu72 libimagequant0 libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libldap-2.5-0 libldap-common liblerc4 liblsan0 libltdl7 liblzo2-2 libmpc3 libmpfr6 libncursesw6 libnghttp2-14 libnsl2 libopenjp2-7 libpng16-16t64 libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libqhull-r8.0 libquadmath0 libraqm0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libsframe1 libsharpyuv0 libsnappy1v5 libsqlite3-0 libssh2-1t64 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 linux-libc-dev manpages manpages-dev media-types netbase openssl publicsuffix python-babel-localedata python-cobra-data python-matplotlib-data python-odf-doc python-odf-tools python-tables-data python3 python3-annotated-types python3-anyio python3-appdirs python3-attr python3-autocommand python3-babel python3-bcrypt python3-bottleneck python3-brotli python3-bs4 python3-certifi python3-cffi-backend python3-chardet python3-click python3-colorama python3-contourpy python3-cpuinfo python3-cryptography python3-cssselect python3-cycler python3-dateutil python3-decorator python3-defusedxml python3-depinfo python3-diskcache python3-dnspython python3-email-validator python3-et-xmlfile python3-fonttools python3-fs python3-h11 python3-h2 python3-hpack python3-html5lib python3-httpcore python3-httpx python3-hyperframe python3-idna python3-importlib-metadata python3-importlib-resources python3-inflect python3-jaraco.context python3-jaraco.functools python3-jinja2 python3-kiwisolver python3-lxml python3-lz4 python3-markdown-it python3-markupsafe python3-matplotlib python3-mdurl python3-minimal python3-more-itertools python3-mpmath python3-numexpr python3-numpy python3-odf python3-olefile python3-openpyxl python3-optlang python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pkg-resources python3-platformdirs python3-pydantic python3-pydantic-core python3-pygments python3-pyparsing python3-rich python3-ruamel.yaml python3-ruamel.yaml.clib python3-sbml5 python3-scipy python3-six python3-sniffio python3-soupsieve python3-swiglpk python3-sympy python3-tables python3-tables-lib python3-tabulate python3-tk python3-typeguard python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2 python3-webencodings python3-zipp python3.12 python3.12-minimal python3.12-tk python3.13-tk readline-common rpcsvc-proto shared-mime-info tk8.6-blt2.5 unicode-data x11-common xdg-user-dirs Suggested packages: binutils-doc gprofng-gui blt-demo cpp-doc gcc-14-locales cpp-14-doc g++-multilib g++-14-multilib gcc-14-doc gcc-multilib make autoconf automake libtool flex bison gdb gcc-doc gcc-14-multilib gdb-x86-64-linux-gnu apache2 | lighttpd | httpd libc-devtools glibc-doc low-memory-monitor libiodbc2-dev default-libmysqlclient-dev gpm krb5-doc krb5-user libjs-jquery-ui-docs liblcms2-utils libsasl2-modules-gssapi-mit | libsasl2-modules-gssapi-heimdal libsasl2-modules-ldap libsasl2-modules-otp libsasl2-modules-sql libstdc++-14-doc tcl8.6 tk8.6 man-browser python3-doc python3-venv python-attr-doc python-bottleneck-doc qsopt-ex python-cryptography-doc python3-cryptography-vectors python-cycler-doc python3-trio python3-aioquic python3-genshi python-jinja2-doc python-lxml-doc cm-super-minimal dvipng ffmpeg fonts-staypuft ghostscript gir1.2-gtk-3.0 inkscape ipython3 librsvg2-common python-matplotlib-doc python3-cairocffi python3-gi python3-gi-cairo python3-gobject python3-pyqt5 python3-sip python3-tornado texlive-extra-utils texlive-latex-extra python-mpmath-doc python3-gmpy2 gfortran python-numpy-doc python3-dev python3-pytest python-openpyxl-doc python-pandas-doc python3-statsmodels python-pil-doc python3-setuptools python-pygments-doc ttf-bitstream-vera python-pyparsing-doc python-scipy-doc texlive-fonts-extra python-sympy-doc python3-netcdf4 python-tables-doc vitables tix python3-tk-dbg python3.12-venv python3.12-doc binfmt-support readline-doc Recommended packages: python3-numba The following NEW packages will be installed: binutils binutils-common binutils-x86-64-linux-gnu blt ca-certificates cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu isympy-common isympy3 javascript-common krb5-locales libaec0 libamd3 libasan8 libatomic1 libbinutils libblas3 libblosc1 libblosc2-4 libbrotli1 libc-dev-bin libc6-dev libcc1-0 libcolamd3 libcrypt-dev libctf-nobfd0 libctf0 libcurl4t64 libdeflate0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgcc-14-dev libgfortran5 libglib2.0-0t64 libglib2.0-data libglpk40 libgomp1 libgpm2 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhdf5-103-1t64 libhwasan0 libicu72 libimagequant0 libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libldap-2.5-0 libldap-common liblerc4 liblsan0 libltdl7 liblzo2-2 libmpc3 libmpfr6 libncursesw6 libnghttp2-14 libnsl2 libopenjp2-7 libpng16-16t64 libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libqhull-r8.0 libquadmath0 libraqm0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libsframe1 libsharpyuv0 libsnappy1v5 libsqlite3-0 libssh2-1t64 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 linux-libc-dev manpages manpages-dev media-types netbase openssl publicsuffix python-babel-localedata python-cobra-data python-matplotlib-data python-odf-doc python-odf-tools python-tables-data python3 python3-annotated-types python3-anyio python3-appdirs python3-attr python3-autocommand python3-babel python3-bcrypt python3-bottleneck python3-brotli python3-bs4 python3-certifi python3-cffi-backend python3-chardet python3-click python3-cobra python3-colorama python3-contourpy python3-cpuinfo python3-cryptography python3-cssselect python3-cycler python3-dateutil python3-decorator python3-defusedxml python3-depinfo python3-diskcache python3-dnspython python3-email-validator python3-et-xmlfile python3-fonttools python3-fs python3-h11 python3-h2 python3-hpack python3-html5lib python3-httpcore python3-httpx python3-hyperframe python3-idna python3-importlib-metadata python3-importlib-resources python3-inflect python3-jaraco.context python3-jaraco.functools python3-jinja2 python3-kiwisolver python3-lxml python3-lz4 python3-markdown-it python3-markupsafe python3-matplotlib python3-mdurl python3-minimal python3-more-itertools python3-mpmath python3-numexpr python3-numpy python3-odf python3-olefile python3-openpyxl python3-optlang python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pkg-resources python3-platformdirs python3-pydantic python3-pydantic-core python3-pygments python3-pyparsing python3-rich python3-ruamel.yaml python3-ruamel.yaml.clib python3-sbml5 python3-scipy python3-six python3-sniffio python3-soupsieve python3-swiglpk python3-sympy python3-tables python3-tables-lib python3-tabulate python3-tk python3-typeguard python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2 python3-webencodings python3-zipp python3.12 python3.12-minimal python3.12-tk python3.13-tk readline-common rpcsvc-proto shared-mime-info tk8.6-blt2.5 unicode-data x11-common xdg-user-dirs 0 upgraded, 249 newly installed, 0 to remove and 0 not upgraded. Need to get 199 MB of archives. After this operation, 828 MB of additional disk space will be used. Get:1 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.6-1 [814 kB] Get:2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.3-1 [105 kB] Get:3 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.6-1 [2168 kB] Get:4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.12.5-1+b1 [27.0 kB] Get:5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get:6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get:7 http://deb.debian.org/debian trixie/main amd64 libncursesw6 amd64 6.5-2 [135 kB] Get:8 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:9 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:10 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get:11 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:12 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:13 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get:14 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3 [82.7 kB] Get:15 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b2 [40.3 kB] Get:16 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-5 [69.3 kB] Get:17 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get:18 http://deb.debian.org/debian trixie/main amd64 libsqlite3-0 amd64 3.46.0-1 [902 kB] Get:19 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.6-1 [1963 kB] Get:20 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.6-1 [669 kB] Get:21 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.12.5-1+b1 [9884 B] Get:22 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.12.5-1+b1 [27.9 kB] Get:23 http://deb.debian.org/debian trixie/main amd64 openssl amd64 3.3.2-1 [1381 kB] Get:24 http://deb.debian.org/debian trixie/main amd64 ca-certificates all 20240203 [158 kB] Get:25 http://deb.debian.org/debian trixie/main amd64 krb5-locales all 1.21.3-3 [101 kB] Get:26 http://deb.debian.org/debian trixie/main amd64 manpages all 6.8-2 [1389 kB] Get:27 http://deb.debian.org/debian trixie/main amd64 binutils-common amd64 2.43.1-3 [2633 kB] Get:28 http://deb.debian.org/debian trixie/main amd64 libsframe1 amd64 2.43.1-3 [77.0 kB] Get:29 http://deb.debian.org/debian trixie/main amd64 libbinutils amd64 2.43.1-3 [528 kB] Get:30 http://deb.debian.org/debian trixie/main amd64 libctf-nobfd0 amd64 2.43.1-3 [154 kB] Get:31 http://deb.debian.org/debian trixie/main amd64 libctf0 amd64 2.43.1-3 [88.2 kB] Get:32 http://deb.debian.org/debian trixie/main amd64 libgprofng0 amd64 2.43.1-3 [797 kB] Get:33 http://deb.debian.org/debian trixie/main amd64 libjansson4 amd64 2.14-2+b2 [39.9 kB] Get:34 http://deb.debian.org/debian trixie/main amd64 binutils-x86-64-linux-gnu amd64 2.43.1-3 [2254 kB] Get:35 http://deb.debian.org/debian trixie/main amd64 binutils amd64 2.43.1-3 [67.7 kB] Get:36 http://deb.debian.org/debian trixie/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1 [1034 kB] Get:37 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b4 [300 kB] Get:38 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.44-1 [280 kB] Get:39 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get:40 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:41 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:42 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get:43 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get:44 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get:45 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get:46 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2 [144 kB] Get:47 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get:48 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get:49 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get:50 http://deb.debian.org/debian trixie/main amd64 libxft2 amd64 2.3.6-1+b1 [54.2 kB] Get:51 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get:52 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get:53 http://deb.debian.org/debian trixie/main amd64 libxss1 amd64 1:1.2.3-1+b1 [17.0 kB] Get:54 http://deb.debian.org/debian trixie/main amd64 libtk8.6 amd64 8.6.14-1 [784 kB] Get:55 http://deb.debian.org/debian trixie/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get:56 http://deb.debian.org/debian trixie/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get:57 http://deb.debian.org/debian trixie/main amd64 libisl23 amd64 0.27-1 [659 kB] Get:58 http://deb.debian.org/debian trixie/main amd64 libmpfr6 amd64 4.2.1-1+b1 [714 kB] Get:59 http://deb.debian.org/debian trixie/main amd64 libmpc3 amd64 1.3.1-1+b2 [52.1 kB] Get:60 http://deb.debian.org/debian trixie/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-3 [11.1 MB] Get:61 http://deb.debian.org/debian trixie/main amd64 cpp-14 amd64 14.2.0-3 [1272 B] Get:62 http://deb.debian.org/debian trixie/main amd64 cpp-x86-64-linux-gnu amd64 4:14.1.0-2 [4784 B] Get:63 http://deb.debian.org/debian trixie/main amd64 cpp amd64 4:14.1.0-2 [1568 B] Get:64 http://deb.debian.org/debian trixie/main amd64 fonts-lyx all 2.4.1-2 [189 kB] Get:65 http://deb.debian.org/debian trixie/main amd64 libcc1-0 amd64 14.2.0-3 [42.9 kB] Get:66 http://deb.debian.org/debian trixie/main amd64 libgomp1 amd64 14.2.0-3 [137 kB] Get:67 http://deb.debian.org/debian trixie/main amd64 libitm1 amd64 14.2.0-3 [25.9 kB] Get:68 http://deb.debian.org/debian trixie/main amd64 libatomic1 amd64 14.2.0-3 [9288 B] Get:69 http://deb.debian.org/debian trixie/main amd64 libasan8 amd64 14.2.0-3 [2728 kB] Get:70 http://deb.debian.org/debian trixie/main amd64 liblsan0 amd64 14.2.0-3 [1205 kB] Get:71 http://deb.debian.org/debian trixie/main amd64 libtsan2 amd64 14.2.0-3 [2461 kB] Get:72 http://deb.debian.org/debian trixie/main amd64 libubsan1 amd64 14.2.0-3 [1075 kB] Get:73 http://deb.debian.org/debian trixie/main amd64 libhwasan0 amd64 14.2.0-3 [1488 kB] Get:74 http://deb.debian.org/debian trixie/main amd64 libquadmath0 amd64 14.2.0-3 [145 kB] Get:75 http://deb.debian.org/debian trixie/main amd64 libgcc-14-dev amd64 14.2.0-3 [2671 kB] Get:76 http://deb.debian.org/debian trixie/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-3 [21.4 MB] Get:77 http://deb.debian.org/debian trixie/main amd64 gcc-14 amd64 14.2.0-3 [522 kB] Get:78 http://deb.debian.org/debian trixie/main amd64 gcc-x86-64-linux-gnu amd64 4:14.1.0-2 [1436 B] Get:79 http://deb.debian.org/debian trixie/main amd64 gcc amd64 4:14.1.0-2 [5136 B] Get:80 http://deb.debian.org/debian trixie/main amd64 libc-dev-bin amd64 2.40-2 [51.8 kB] Get:81 http://deb.debian.org/debian trixie/main amd64 linux-libc-dev all 6.10.9-1 [2388 kB] Get:82 http://deb.debian.org/debian trixie/main amd64 libcrypt-dev amd64 1:4.4.36-5 [118 kB] Get:83 http://deb.debian.org/debian trixie/main amd64 rpcsvc-proto amd64 1.4.3-1 [63.3 kB] Get:84 http://deb.debian.org/debian trixie/main amd64 libc6-dev amd64 2.40-2 [1932 kB] Get:85 http://deb.debian.org/debian trixie/main amd64 libstdc++-14-dev amd64 14.2.0-3 [2365 kB] Get:86 http://deb.debian.org/debian trixie/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-3 [12.1 MB] Get:87 http://deb.debian.org/debian trixie/main amd64 g++-14 amd64 14.2.0-3 [19.1 kB] Get:88 http://deb.debian.org/debian trixie/main amd64 g++-x86-64-linux-gnu amd64 4:14.1.0-2 [1204 B] Get:89 http://deb.debian.org/debian trixie/main amd64 g++ amd64 4:14.1.0-2 [1344 B] Get:90 http://deb.debian.org/debian trixie/main amd64 isympy-common all 1.13.2-1 [234 kB] Get:91 http://deb.debian.org/debian trixie/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get:92 http://deb.debian.org/debian trixie/main amd64 python3-sympy all 1.13.2-1 [4147 kB] Get:93 http://deb.debian.org/debian trixie/main amd64 isympy3 all 1.13.2-1 [6280 B] Get:94 http://deb.debian.org/debian trixie/main amd64 javascript-common all 11+nmu1 [6260 B] Get:95 http://deb.debian.org/debian trixie/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get:96 http://deb.debian.org/debian trixie/main amd64 libsuitesparseconfig7 amd64 1:7.8.2+dfsg-2 [23.3 kB] Get:97 http://deb.debian.org/debian trixie/main amd64 libamd3 amd64 1:7.8.2+dfsg-2 [40.2 kB] Get:98 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get:99 http://deb.debian.org/debian trixie/main amd64 libsnappy1v5 amd64 1.2.1-1 [29.1 kB] Get:100 http://deb.debian.org/debian trixie/main amd64 libblosc1 amd64 1.21.5+ds-1+b1 [49.6 kB] Get:101 http://deb.debian.org/debian trixie/main amd64 libblosc2-4 amd64 2.15.1+ds-1 [192 kB] Get:102 http://deb.debian.org/debian trixie/main amd64 libcolamd3 amd64 1:7.8.2+dfsg-2 [32.0 kB] Get:103 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:104 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:105 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3 [187 kB] Get:106 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.63.0-1 [74.8 kB] Get:107 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get:108 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get:109 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.0-7 [216 kB] Get:110 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.9.1-2 [463 kB] Get:111 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.21-1 [47.3 kB] Get:112 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get:113 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-3 [837 kB] Get:114 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.82.1-1 [1499 kB] Get:115 http://deb.debian.org/debian trixie/main amd64 libglib2.0-data all 2.82.1-1 [1277 kB] Get:116 http://deb.debian.org/debian trixie/main amd64 libltdl7 amd64 2.4.7-7+b1 [393 kB] Get:117 http://deb.debian.org/debian trixie/main amd64 libglpk40 amd64 5.0-1+b1 [397 kB] Get:118 http://deb.debian.org/debian trixie/main amd64 libgpm2 amd64 1.20.7-11 [14.0 kB] Get:119 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get:120 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 9.0.0-1 [474 kB] Get:121 http://deb.debian.org/debian trixie/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get:122 http://deb.debian.org/debian trixie/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB] Get:123 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:124 http://deb.debian.org/debian trixie/main amd64 libimagequant0 amd64 2.18.0-1+b1 [35.3 kB] Get:125 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get:126 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get:127 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get:128 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get:129 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get:130 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b1 [29.1 kB] Get:131 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.14-2+b1 [154 kB] Get:132 http://deb.debian.org/debian trixie/main amd64 libldap-common all 2.5.18+dfsg-3 [32.0 kB] Get:133 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get:134 http://deb.debian.org/debian trixie/main amd64 liblzo2-2 amd64 2.10-3 [54.4 kB] Get:135 http://deb.debian.org/debian trixie/main amd64 libopenjp2-7 amd64 2.5.0-2+b3 [190 kB] Get:136 http://deb.debian.org/debian trixie/main amd64 libpython3.12t64 amd64 3.12.6-1 [2147 kB] Get:137 http://deb.debian.org/debian trixie/main amd64 libqhull-r8.0 amd64 2020.2-6+b1 [245 kB] Get:138 http://deb.debian.org/debian trixie/main amd64 libraqm0 amd64 0.10.1-1+b1 [14.2 kB] Get:139 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules amd64 2.1.28+dfsg1-8 [66.5 kB] Get:140 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get:141 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get:142 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get:143 http://deb.debian.org/debian trixie/main amd64 libwebpdemux2 amd64 1.4.0-0.1 [110 kB] Get:144 http://deb.debian.org/debian trixie/main amd64 libwebpmux3 amd64 1.4.0-0.1 [123 kB] Get:145 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get:146 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1.1 [232 kB] Get:147 http://deb.debian.org/debian trixie/main amd64 manpages-dev all 6.8-2 [2041 kB] Get:148 http://deb.debian.org/debian trixie/main amd64 publicsuffix all 20231001.0357-0.1 [125 kB] Get:149 http://deb.debian.org/debian trixie/main amd64 python-babel-localedata all 2.14.0-1 [5701 kB] Get:150 http://deb.debian.org/debian trixie/main amd64 python-cobra-data all 0.29.1-1 [1437 kB] Get:151 http://deb.debian.org/debian trixie/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get:152 http://deb.debian.org/debian trixie/main amd64 python-odf-doc all 1.4.2-2 [213 kB] Get:153 http://deb.debian.org/debian trixie/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB] Get:154 http://deb.debian.org/debian trixie/main amd64 python3-odf all 1.4.2-2 [78.0 kB] Get:155 http://deb.debian.org/debian trixie/main amd64 python-odf-tools all 1.4.2-2 [28.1 kB] Get:156 http://deb.debian.org/debian trixie/main amd64 python-tables-data all 3.10.1-1 [49.5 kB] Get:157 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get:158 http://deb.debian.org/debian trixie/main amd64 python3-annotated-types all 0.7.0-1 [18.8 kB] Get:159 http://deb.debian.org/debian trixie/main amd64 python3-idna all 3.6-2.1 [38.6 kB] Get:160 http://deb.debian.org/debian trixie/main amd64 python3-sniffio all 1.3.1-1 [7120 B] Get:161 http://deb.debian.org/debian trixie/main amd64 python3-anyio all 4.4.0-1 [57.3 kB] Get:162 http://deb.debian.org/debian trixie/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get:163 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.20.2-1 [10.3 kB] Get:164 http://deb.debian.org/debian trixie/main amd64 python3-importlib-metadata all 8.4.0-1 [20.8 kB] Get:165 http://deb.debian.org/debian trixie/main amd64 python3-attr all 23.2.0-2 [65.5 kB] Get:166 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get:167 http://deb.debian.org/debian trixie/main amd64 python3-importlib-resources all 6.0.1-1 [21.7 kB] Get:168 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.4.0-1 [63.7 kB] Get:169 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.3.0-1 [36.5 kB] Get:170 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get:171 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get:172 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.0.2-1 [11.7 kB] Get:173 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 74.1.2-2 [213 kB] Get:174 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get:175 http://deb.debian.org/debian trixie/main amd64 python3-babel all 2.14.0-1 [111 kB] Get:176 http://deb.debian.org/debian trixie/main amd64 python3-bcrypt amd64 4.2.0-1 [206 kB] Get:177 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB] Get:178 http://deb.debian.org/debian trixie/main amd64 python3-bottleneck amd64 1.3.8+ds1-1+b1 [88.2 kB] Get:179 http://deb.debian.org/debian trixie/main amd64 python3-brotli amd64 1.1.0-2+b4 [309 kB] Get:180 http://deb.debian.org/debian trixie/main amd64 python3-soupsieve all 2.6-1 [38.3 kB] Get:181 http://deb.debian.org/debian trixie/main amd64 python3-bs4 all 4.12.3-3 [133 kB] Get:182 http://deb.debian.org/debian trixie/main amd64 python3-certifi all 2024.8.30-1 [159 kB] Get:183 http://deb.debian.org/debian trixie/main amd64 python3-cffi-backend amd64 1.17.1-1 [87.1 kB] Get:184 http://deb.debian.org/debian trixie/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get:185 http://deb.debian.org/debian trixie/main amd64 python3-colorama all 0.4.6-4 [36.2 kB] Get:186 http://deb.debian.org/debian trixie/main amd64 python3-click all 8.1.7-2 [94.3 kB] Get:187 http://deb.debian.org/debian trixie/main amd64 python3-depinfo amd64 2.2.0-2 [11.5 kB] Get:188 http://deb.debian.org/debian trixie/main amd64 python3-diskcache all 5.6.3-1 [34.4 kB] Get:189 http://deb.debian.org/debian trixie/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get:190 http://deb.debian.org/debian trixie/main amd64 python3-mdurl all 0.1.2-1 [9444 B] Get:191 http://deb.debian.org/debian trixie/main amd64 python3-markdown-it all 3.0.0-2 [62.5 kB] Get:192 http://deb.debian.org/debian trixie/main amd64 python3-rich all 13.7.1-1 [201 kB] Get:193 http://deb.debian.org/debian trixie/main amd64 python3-h11 all 0.14.0-1 [50.1 kB] Get:194 http://deb.debian.org/debian trixie/main amd64 python3-httpcore all 1.0.4-1 [44.5 kB] Get:195 http://deb.debian.org/debian trixie/main amd64 python3-httpx all 0.27.0-1 [76.8 kB] Get:196 http://deb.debian.org/debian trixie/main amd64 python3-swiglpk amd64 5.0.10-2 [64.0 kB] Get:197 http://deb.debian.org/debian trixie/main amd64 python3-optlang all 1.8.2-2 [5375 kB] Get:198 http://deb.debian.org/debian trixie/main amd64 python3-six all 1.16.0-7 [16.4 kB] Get:199 http://deb.debian.org/debian trixie/main amd64 python3-dateutil all 2.9.0-2 [79.4 kB] Get:200 http://deb.debian.org/debian trixie/main amd64 python3-pandas-lib amd64 2.2.2+dfsg-4+b1 [4115 kB] Get:201 http://deb.debian.org/debian trixie/main amd64 python3-pandas all 2.2.2+dfsg-4 [3095 kB] Get:202 http://deb.debian.org/debian trixie/main amd64 python3-platformdirs all 4.3.2-1 [16.5 kB] Get:203 http://deb.debian.org/debian trixie/main amd64 python3-pydantic-core amd64 2.23.4-1 [1486 kB] Get:204 http://deb.debian.org/debian trixie/main amd64 python3-dnspython all 2.6.1-1 [161 kB] Get:205 http://deb.debian.org/debian trixie/main amd64 python3-email-validator all 2.2.0-1 [31.6 kB] Get:206 http://deb.debian.org/debian trixie/main amd64 python3-pydantic amd64 2.9.1-2 [342 kB] Get:207 http://deb.debian.org/debian trixie/main amd64 python3-ruamel.yaml.clib amd64 0.2.8+ds-2 [130 kB] Get:208 http://deb.debian.org/debian trixie/main amd64 python3-ruamel.yaml all 0.18.6+ds-3 [145 kB] Get:209 http://deb.debian.org/debian trixie/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB] Get:210 http://deb.debian.org/debian trixie/main amd64 python3-sbml5 amd64 5.20.2+dfsg-8 [3392 kB] Get:211 http://deb.debian.org/debian trixie/main amd64 python3-cobra amd64 0.29.1-1 [1119 kB] Get:212 http://deb.debian.org/debian trixie/main amd64 python3-contourpy amd64 1.3.0-1 [212 kB] Get:213 http://deb.debian.org/debian trixie/main amd64 python3-cpuinfo all 9.0.0+git20221119-2 [23.4 kB] Get:214 http://deb.debian.org/debian trixie/main amd64 python3-cryptography amd64 43.0.0-1 [935 kB] Get:215 http://deb.debian.org/debian trixie/main amd64 python3-cssselect all 1.2.0-4 [21.7 kB] Get:216 http://deb.debian.org/debian trixie/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get:217 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get:218 http://deb.debian.org/debian trixie/main amd64 python3-et-xmlfile all 1.0.1-2.1 [9180 B] Get:219 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.13.1-5 [16.7 MB] Get:220 http://deb.debian.org/debian trixie/main amd64 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get:221 http://deb.debian.org/debian trixie/main amd64 python3-fs all 2.4.16-4 [95.4 kB] Get:222 http://deb.debian.org/debian trixie/main amd64 python3-lxml amd64 5.3.0-1 [1251 kB] Get:223 http://deb.debian.org/debian trixie/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b4 [25.2 kB] Get:224 http://deb.debian.org/debian trixie/main amd64 python3-unicodedata2 amd64 15.1.0+ds-1+b2 [298 kB] Get:225 http://deb.debian.org/debian trixie/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get:226 http://deb.debian.org/debian trixie/main amd64 python3-fonttools amd64 4.46.0-1+b1 [1382 kB] Get:227 http://deb.debian.org/debian trixie/main amd64 python3-hpack all 4.0.0-2 [25.0 kB] Get:228 http://deb.debian.org/debian trixie/main amd64 python3-hyperframe all 6.0.0-1 [14.5 kB] Get:229 http://deb.debian.org/debian trixie/main amd64 python3-h2 all 4.1.0-4 [80.8 kB] Get:230 http://deb.debian.org/debian trixie/main amd64 python3-webencodings all 0.5.1-5 [11.1 kB] Get:231 http://deb.debian.org/debian trixie/main amd64 python3-html5lib all 1.1-6 [90.5 kB] Get:232 http://deb.debian.org/debian trixie/main amd64 python3-markupsafe amd64 2.1.5-1+b1 [13.6 kB] Get:233 http://deb.debian.org/debian trixie/main amd64 python3-jinja2 all 3.1.3-1 [119 kB] Get:234 http://deb.debian.org/debian trixie/main amd64 python3-kiwisolver amd64 1.4.5-1+b1 [59.5 kB] Get:235 http://deb.debian.org/debian trixie/main amd64 python3-pil amd64 10.4.0-1 [502 kB] Get:236 http://deb.debian.org/debian trixie/main amd64 python3.12-tk amd64 3.12.6-1 [112 kB] Get:237 http://deb.debian.org/debian trixie/main amd64 python3.13-tk amd64 3.13.0~rc2-1 [103 kB] Get:238 http://deb.debian.org/debian trixie/main amd64 python3-tk amd64 3.12.6-1 [9428 B] Get:239 http://deb.debian.org/debian trixie/main amd64 python3-pil.imagetk amd64 10.4.0-1 [79.4 kB] Get:240 http://deb.debian.org/debian trixie/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get:241 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.1-1 [45.8 kB] Get:242 http://deb.debian.org/debian trixie/main amd64 python3-matplotlib amd64 3.8.3-3 [5560 kB] Get:243 http://deb.debian.org/debian trixie/main amd64 python3-numexpr amd64 2.10.1-2+b1 [125 kB] Get:244 http://deb.debian.org/debian trixie/main amd64 python3-olefile all 0.46-3 [36.1 kB] Get:245 http://deb.debian.org/debian trixie/main amd64 python3-openpyxl all 3.1.5+dfsg-1 [166 kB] Get:246 http://deb.debian.org/debian trixie/main amd64 python3-tables-lib amd64 3.10.1-1 [512 kB] Get:247 http://deb.debian.org/debian trixie/main amd64 python3-tables all 3.10.1-1 [355 kB] Get:248 http://deb.debian.org/debian trixie/main amd64 shared-mime-info amd64 2.4-5 [758 kB] Get:249 http://deb.debian.org/debian trixie/main amd64 xdg-user-dirs amd64 0.18-1 [54.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 199 MB in 1s (160 MB/s) Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5145 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.6-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.6-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.3-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.6-1_amd64.deb ... Unpacking python3.12-minimal (3.12.6-1) ... Setting up libpython3.12-minimal:amd64 (3.12.6-1) ... Setting up libexpat1:amd64 (2.6.3-1) ... Setting up python3.12-minimal (3.12.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 5465 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.5-1+b1_amd64.deb ... 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Unpacking python3-hyperframe (6.0.0-1) ... Selecting previously unselected package python3-h2. Preparing to unpack .../207-python3-h2_4.1.0-4_all.deb ... Unpacking python3-h2 (4.1.0-4) ... Selecting previously unselected package python3-webencodings. Preparing to unpack .../208-python3-webencodings_0.5.1-5_all.deb ... Unpacking python3-webencodings (0.5.1-5) ... Selecting previously unselected package python3-html5lib. Preparing to unpack .../209-python3-html5lib_1.1-6_all.deb ... Unpacking python3-html5lib (1.1-6) ... Selecting previously unselected package python3-markupsafe. Preparing to unpack .../210-python3-markupsafe_2.1.5-1+b1_amd64.deb ... Unpacking python3-markupsafe (2.1.5-1+b1) ... Selecting previously unselected package python3-jinja2. Preparing to unpack .../211-python3-jinja2_3.1.3-1_all.deb ... Unpacking python3-jinja2 (3.1.3-1) ... Selecting previously unselected package python3-kiwisolver. Preparing to unpack .../212-python3-kiwisolver_1.4.5-1+b1_amd64.deb ... Unpacking python3-kiwisolver (1.4.5-1+b1) ... Selecting previously unselected package python3-pil:amd64. Preparing to unpack .../213-python3-pil_10.4.0-1_amd64.deb ... Unpacking python3-pil:amd64 (10.4.0-1) ... Selecting previously unselected package python3.12-tk. Preparing to unpack .../214-python3.12-tk_3.12.6-1_amd64.deb ... Unpacking python3.12-tk (3.12.6-1) ... Selecting previously unselected package python3.13-tk. Preparing to unpack .../215-python3.13-tk_3.13.0~rc2-1_amd64.deb ... Unpacking python3.13-tk (3.13.0~rc2-1) ... Selecting previously unselected package python3-tk:amd64. Preparing to unpack .../216-python3-tk_3.12.6-1_amd64.deb ... Unpacking python3-tk:amd64 (3.12.6-1) ... Selecting previously unselected package python3-pil.imagetk:amd64. Preparing to unpack .../217-python3-pil.imagetk_10.4.0-1_amd64.deb ... Unpacking python3-pil.imagetk:amd64 (10.4.0-1) ... Selecting previously unselected package python3-pyparsing. 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Selecting previously unselected package python3-tables-lib. Preparing to unpack .../224-python3-tables-lib_3.10.1-1_amd64.deb ... Unpacking python3-tables-lib (3.10.1-1) ... Selecting previously unselected package python3-tables. Preparing to unpack .../225-python3-tables_3.10.1-1_all.deb ... Unpacking python3-tables (3.10.1-1) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../226-shared-mime-info_2.4-5_amd64.deb ... Unpacking shared-mime-info (2.4-5) ... Selecting previously unselected package xdg-user-dirs. Preparing to unpack .../227-xdg-user-dirs_0.18-1_amd64.deb ... Unpacking xdg-user-dirs (0.18-1) ... Setting up media-types (10.1.0) ... Setting up javascript-common (11+nmu1) ... Setting up libgraphite2-3:amd64 (1.3.14-2) ... Setting up liblcms2-2:amd64 (2.14-2+b1) ... Setting up libsharpyuv0:amd64 (1.4.0-0.1) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up libkeyutils1:amd64 (1.6.3-3) ... Setting up libxcb1:amd64 (1.17.0-2) ... Setting up libgpm2:amd64 (1.20.7-11) ... Setting up libicu72:amd64 (72.1-5) ... Setting up liblerc4:amd64 (4.0.0+ds-4+b1) ... Setting up xdg-user-dirs (0.18-1) ... Setting up manpages (6.8-2) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up fonts-lyx (2.4.1-2) ... Setting up libbrotli1:amd64 (1.1.0-2+b4) ... Setting up libsqlite3-0:amd64 (3.46.0-1) ... Setting up libsasl2-modules:amd64 (2.1.28+dfsg1-8) ... Setting up binutils-common:amd64 (2.43.1-3) ... Setting up x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.63.0-1) ... Setting up libdeflate0:amd64 (1.21-1) ... Setting up linux-libc-dev (6.10.9-1) ... Setting up libctf-nobfd0:amd64 (2.43.1-3) ... Setting up libqhull-r8.0:amd64 (2020.2-6+b1) ... Setting up liblzo2-2:amd64 (2.10-3) ... Setting up krb5-locales (1.21.3-3) ... Setting up libgomp1:amd64 (14.2.0-3) ... Setting up libldap-common (2.5.18+dfsg-3) ... Setting up libjbig0:amd64 (2.1-6.1+b1) ... Setting up libaec0:amd64 (1.1.3-1) ... Setting up libsframe1:amd64 (2.43.1-3) ... Setting up python-babel-localedata (2.14.0-1) ... Setting up libjansson4:amd64 (2.14-2+b2) ... Setting up libsnappy1v5:amd64 (1.2.1-1) ... Setting up libkrb5support0:amd64 (1.21.3-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Setting up unicode-data (15.1.0-1) ... Setting up libblosc2-4:amd64 (2.15.1+ds-1) ... Setting up libblas3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libglib2.0-data (2.82.1-1) ... Setting up rpcsvc-proto (1.4.3-1) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libmpfr6:amd64 (4.2.1-1+b1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libfribidi0:amd64 (1.0.15-1) ... Setting up libquadmath0:amd64 (14.2.0-3) ... Setting up libimagequant0:amd64 (2.18.0-1+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.44-1) ... Setting up libmpc3:amd64 (1.3.1-1+b2) ... Setting up libatomic1:amd64 (14.2.0-3) ... Setting up libtcl8.6:amd64 (8.6.14+dfsg-1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libncursesw6:amd64 (6.5-2) ... Setting up libk5crypto3:amd64 (1.21.3-3) ... Setting up libltdl7:amd64 (2.4.7-7+b1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Setting up libgfortran5:amd64 (14.2.0-3) ... Setting up libwebp7:amd64 (1.4.0-0.1) ... Setting up libubsan1:amd64 (14.2.0-3) ... Setting up libhwasan0:amd64 (14.2.0-3) ... Setting up libcrypt-dev:amd64 (1:4.4.36-5) ... Setting up libtiff6:amd64 (4.5.1+git230720-5) ... Setting up libasan8:amd64 (14.2.0-3) ... Setting up libblosc1:amd64 (1.21.5+ds-1+b1) ... Setting up libsuitesparseconfig7:amd64 (1:7.8.2+dfsg-2) ... Setting up libopenjp2-7:amd64 (2.5.0-2+b3) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up netbase (6.4) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libssh2-1t64:amd64 (1.11.0-7) ... Setting up libtsan2:amd64 (14.2.0-3) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libbinutils:amd64 (2.43.1-3) ... Setting up libisl23:amd64 (0.27-1) ... Setting up libc-dev-bin (2.40-2) ... Setting up python-matplotlib-data (3.8.3-3) ... Setting up openssl (3.3.2-1) ... Setting up libwebpmux3:amd64 (1.4.0-0.1) ... Setting up python-cobra-data (0.29.1-1) ... Setting up readline-common (8.2-5) ... Setting up publicsuffix (20231001.0357-0.1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Setting up python-tables-data (3.10.1-1) ... Setting up libcc1-0:amd64 (14.2.0-3) ... Setting up liblsan0:amd64 (14.2.0-3) ... Setting up libsz2:amd64 (1.1.3-1) ... Setting up libitm1:amd64 (14.2.0-3) ... Setting up libctf0:amd64 (2.43.1-3) ... Setting up manpages-dev (6.8-2) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libamd3:amd64 (1:7.8.2+dfsg-2) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up libcolamd3:amd64 (1:7.8.2+dfsg-2) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libwebpdemux2:amd64 (1.4.0-0.1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libglib2.0-0t64:amd64 (2.82.1-1) ... No schema files found: doing nothing. Setting up libgprofng0:amd64 (2.43.1-3) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:amd64 (2.13.3+dfsg-1) ... Setting up libglpk40:amd64 (5.0-1+b1) ... Setting up shared-mime-info (2.4-5) ... Warning: program compiled against libxml 212 using older 209 Setting up python-odf-doc (1.4.2-2) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up cpp-14-x86-64-linux-gnu (14.2.0-3) ... Setting up cpp-14 (14.2.0-3) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up libxslt1.1:amd64 (1.1.35-1.1) ... Setting up libc6-dev:amd64 (2.40-2) ... Setting up libharfbuzz0b:amd64 (9.0.0-1) ... Setting up libxss1:amd64 (1:1.2.3-1+b1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up libgcc-14-dev:amd64 (14.2.0-3) ... Setting up libstdc++-14-dev:amd64 (14.2.0-3) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Setting up binutils-x86-64-linux-gnu (2.43.1-3) ... Setting up cpp-x86-64-linux-gnu (4:14.1.0-2) ... Setting up libxft2:amd64 (2.3.6-1+b1) ... Setting up libcurl4t64:amd64 (8.9.1-2) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Setting up libtk8.6:amd64 (8.6.14-1) ... Setting up python3.12-tk (3.12.6-1) ... Setting up binutils (2.43.1-3) ... Setting up python3.13-tk (3.13.0~rc2-1) ... Setting up libraqm0:amd64 (0.10.1-1+b1) ... Setting up cpp (4:14.1.0-2) ... Setting up libnsl2:amd64 (1.3.0-3+b2) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-3) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libpython3.12-stdlib:amd64 (3.12.6-1) ... Setting up gcc-x86-64-linux-gnu (4:14.1.0-2) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.6-1) ... Setting up gcc-14 (14.2.0-3) ... Setting up libpython3.12t64:amd64 (3.12.6-1) ... Setting up g++-14-x86-64-linux-gnu (14.2.0-3) ... Setting up g++-x86-64-linux-gnu (4:14.1.0-2) ... Setting up g++-14 (14.2.0-3) ... Setting up libpython3-stdlib:amd64 (3.12.5-1+b1) ... Setting up python3 (3.12.5-1+b1) ... Setting up python3-zipp (3.20.2-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b1) ... Setting up python3-webencodings (0.5.1-5) ... Setting up python3-annotated-types (0.7.0-1) ... Setting up python3-sbml5 (5.20.2+dfsg-8) ... Setting up python3-platformdirs (4.3.2-1) ... Setting up python3-tz (2024.1-2) ... Setting up gcc (4:14.1.0-2) ... Setting up python3-six (1.16.0-7) ... Setting up python3-pil:amd64 (10.4.0-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30-1) ... Setting up python3-brotli (1.1.0-2+b4) ... Setting up python3-mdurl (0.1.2-1) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.5-1+b1) ... Setting up python3-idna (3.6-2.1) ... Setting up python3-h11 (0.14.0-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-cpuinfo (9.0.0+git20221119-2) ... Setting up python3-html5lib (1.1-6) ... Setting up python3-markdown-it (3.0.0-2) ... Setting up g++ (4:14.1.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up python3-lxml:amd64 (5.3.0-1) ... Setting up python3-dnspython (2.6.1-1) ... Setting up python3-et-xmlfile (1.0.1-2.1) ... Setting up python3-dateutil (2.9.0-2) ... Setting up python3-email-validator (2.2.0-1) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-diskcache (5.6.3-1) ... Setting up python3-cssselect (1.2.0-4) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-swiglpk (5.0.10-2) ... Setting up python3-soupsieve (2.6-1) ... Setting up python3-cffi-backend:amd64 (1.17.1-1) ... Setting up python3-more-itertools (10.4.0-1) ... Setting up python3-httpcore (1.0.4-1) ... Setting up python3-sniffio (1.3.1-1) ... Setting up python3-sympy (1.13.2-1) ... Setting up python3-attr (23.2.0-2) ... Setting up python3-pydantic-core (2.23.4-1) ... Setting up python3-importlib-metadata (8.4.0-1) ... Setting up python3-jaraco.functools (4.0.2-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-anyio (4.4.0-1) ... Setting up python3-importlib-resources (6.0.1-1) ... Setting up python3-hyperframe (6.0.0-1) ... Setting up python3-hpack (4.0.0-2) ... Setting up python3-colorama (0.4.6-4) ... Setting up python3-lz4 (4.0.2+dfsg-1+b4) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-unicodedata2 (15.1.0+ds-1+b2) ... Setting up python3-olefile (0.46-3) ... Setting up python3-bcrypt (4.2.0-1) ... Setting up python3-typeguard (4.3.0-1) ... Setting up python3-ruamel.yaml.clib:amd64 (0.2.8+ds-2) ... Setting up isympy-common (1.13.2-1) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-tk:amd64 (3.12.6-1) ... Setting up python3-click (8.1.7-2) ... Setting up python3-bs4 (4.12.3-3) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1) ... Setting up python3-openpyxl (3.1.5+dfsg-1) ... Setting up python3-cryptography (43.0.0-1) ... Setting up isympy3 (1.13.2-1) ... Setting up python3-pydantic (2.9.1-2) ... Setting up python3-ruamel.yaml (0.18.6+ds-3) ... Setting up python3-h2 (4.1.0-4) ... Setting up python3-odf (1.4.2-2) ... Setting up python3-optlang (1.8.2-2) ... /usr/lib/python3/dist-packages/optlang/matrix_interface.py:60: SyntaxWarning: invalid escape sequence '\m' """A representation of the convex optimizatgion problem in standard form. /usr/lib/python3/dist-packages/optlang/tests/data/parse_the_final_netlib_results.py:34: SyntaxWarning: invalid escape sequence '\*' OBJ_REGEX = re.compile('\* Objvalue : -?\d+/\d+') /usr/lib/python3/dist-packages/optlang/tests/test_cplex_interface.py:222: SyntaxWarning: invalid escape sequence '\s' self.assertRegexpMatches(str(self.model), '\s*Dummy_\d+:\s*y \+ z \+ 2\.333 x - .* = -300') Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python-odf-tools (1.4.2-2) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-depinfo (2.2.0-2) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up python3-contourpy (1.3.0-1) ... Setting up python3-scipy (1.13.1-5) ... Setting up python3-rich (13.7.1-1) ... Setting up python3-tables-lib (3.10.1-1) ... Setting up python3-pandas-lib:amd64 (2.2.2+dfsg-4+b1) ... Setting up python3-pandas (2.2.2+dfsg-4) ... Setting up python3-httpx (0.27.0-1) ... Setting up python3-bottleneck (1.3.8+ds1-1+b1) ... Setting up python3-numexpr (2.10.1-2+b1) ... Setting up python3-cobra (0.29.1-1) ... Setting up python3-tables (3.10.1-1) ... Setting up python3-fonttools (4.46.0-1+b1) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-3) ... Processing triggers for libc-bin (2.40-2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. 1m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', '-y', 'install', 'python3-cobra=0.29.1-1'] 1m2.9s INFO: Running scripts post_install 1m2.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_install_exceptions'] 1m2.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_install_exceptions'] 1m2.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 1m4.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 1m7.5s DEBUG: No broken symlinks as far as we can find. 1m9.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', '-ac', '--ignore-obsolete'] 1m12.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', '-ac', '--ignore-obsolete'] 1m12.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m12.2s DUMP: 0.15.6 1m12.2s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m12.2s INFO: Running adequate version 0.15.6 now. 1m12.2s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'python3-cobra'] 1m12.3s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'python3-cobra'] 1m12.3s INFO: Running scripts pre_remove 1m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m15.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m15.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m15.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m15.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_exceptions'] 1m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/pre_remove_exceptions'] 1m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m15.6s DUMP: install ok installed apt apt 2.9.8 install ok installed base-files base-files 13.5 install ok installed base-passwd base-passwd 3.6.4 install ok installed bash bash 5.2.32-1+b1 install ok installed binutils binutils 2.43.1-3 install ok installed binutils-common:amd64 binutils-common 2.43.1-3 install ok installed binutils-x86-64-linux-gnu binutils-x86-64-linux-gnu 2.43.1-3 install ok installed blt blt 2.5.3+dfsg-7 install ok installed bsdutils bsdutils 1:2.40.2-8 install ok installed ca-certificates ca-certificates 20240203 install ok installed coreutils coreutils 9.4-3.1 install ok installed cpp cpp 4:14.1.0-2 install ok installed cpp-14 cpp-14 14.2.0-3 install ok installed cpp-14-x86-64-linux-gnu cpp-14-x86-64-linux-gnu 14.2.0-3 install ok installed cpp-x86-64-linux-gnu cpp-x86-64-linux-gnu 4:14.1.0-2 install ok installed dash dash 0.5.12-9 install ok installed debconf debconf 1.5.87 install ok installed debian-archive-keyring debian-archive-keyring 2023.4 install ok installed debianutils debianutils 5.20 install ok installed diffutils diffutils 1:3.10-1 install ok installed dpkg dpkg 1.22.11 install ok installed e2fsprogs e2fsprogs 1.47.1-1 install ok installed findutils findutils 4.10.0-3 install ok installed fontconfig-config fontconfig-config 2.15.0-1.1 install ok installed fonts-dejavu-core fonts-dejavu-core 2.37-8 install ok installed fonts-dejavu-mono fonts-dejavu-mono 2.37-8 install ok installed fonts-lyx fonts-lyx 2.4.1-2 install ok installed g++ g++ 4:14.1.0-2 install ok installed g++-14 g++-14 14.2.0-3 install ok installed g++-14-x86-64-linux-gnu g++-14-x86-64-linux-gnu 14.2.0-3 install ok installed g++-x86-64-linux-gnu g++-x86-64-linux-gnu 4:14.1.0-2 install ok installed gcc gcc 4:14.1.0-2 install ok installed gcc-14 gcc-14 14.2.0-3 install ok installed gcc-14-base:amd64 gcc-14-base 14.2.0-3 install ok installed gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu 14.2.0-3 install ok installed gcc-x86-64-linux-gnu gcc-x86-64-linux-gnu 4:14.1.0-2 install ok installed gpgv gpgv 2.2.43-8+b1 install ok installed grep grep 3.11-4 install ok installed gzip gzip 1.12-1.1 install ok installed hostname hostname 3.23+nmu2 install ok installed init-system-helpers init-system-helpers 1.66 install ok installed isympy-common isympy-common 1.13.2-1 install ok installed isympy3 isympy3 1.13.2-1 install ok installed javascript-common javascript-common 11+nmu1 install ok installed krb5-locales krb5-locales 1.21.3-3 install ok installed libacl1:amd64 libacl1 2.3.2-2 install ok installed libaec0:amd64 libaec0 1.1.3-1 install ok installed libamd3:amd64 libamd3 1:7.8.2+dfsg-2 install ok installed libapt-pkg6.0t64:amd64 libapt-pkg6.0t64 2.9.8 install ok installed libasan8:amd64 libasan8 14.2.0-3 install ok installed libatomic1:amd64 libatomic1 14.2.0-3 install ok installed libattr1:amd64 libattr1 1:2.5.2-1 install ok installed libaudit-common libaudit-common 1:3.1.2-4 install ok installed libaudit1:amd64 libaudit1 1:3.1.2-4+b1 install ok installed libbinutils:amd64 libbinutils 2.43.1-3 install ok installed libblas3:amd64 libblas3 3.12.0-3 install ok installed libblkid1:amd64 libblkid1 2.40.2-8 install ok installed libblosc1:amd64 libblosc1 1.21.5+ds-1+b1 install ok installed libblosc2-4:amd64 libblosc2-4 2.15.1+ds-1 install ok installed libbrotli1:amd64 libbrotli1 1.1.0-2+b4 install ok installed libbsd0:amd64 libbsd0 0.12.2-1 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.8-6 install ok installed libc-bin libc-bin 2.40-2 install ok installed libc-dev-bin libc-dev-bin 2.40-2 install ok installed libc6:amd64 libc6 2.40-2 install ok installed libc6-dev:amd64 libc6-dev 2.40-2 install ok installed libcap-ng0:amd64 libcap-ng0 0.8.5-2 install ok installed libcap2:amd64 libcap2 1:2.66-5 install ok installed libcc1-0:amd64 libcc1-0 14.2.0-3 install ok installed libcolamd3:amd64 libcolamd3 1:7.8.2+dfsg-2 install ok installed libcom-err2:amd64 libcom-err2 1.47.1-1 install ok installed libcrypt-dev:amd64 libcrypt-dev 1:4.4.36-5 install ok installed libcrypt1:amd64 libcrypt1 1:4.4.36-5 install ok installed libctf-nobfd0:amd64 libctf-nobfd0 2.43.1-3 install ok installed libctf0:amd64 libctf0 2.43.1-3 install ok installed libcurl4t64:amd64 libcurl4t64 8.9.1-2 install ok installed libdb5.3t64:amd64 libdb5.3t64 5.3.28+dfsg2-7 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.272 install ok installed libdeflate0:amd64 libdeflate0 1.21-1 install ok installed libexpat1:amd64 libexpat1 2.6.3-1 install ok installed libext2fs2t64:amd64 libext2fs2t64 1.47.1-1 install ok installed libffi8:amd64 libffi8 3.4.6-1 install ok installed libfontconfig1:amd64 libfontconfig1 2.15.0-1.1 install ok installed libfreetype6:amd64 libfreetype6 2.13.3+dfsg-1 install ok installed libfribidi0:amd64 libfribidi0 1.0.15-1 install ok installed libgcc-14-dev:amd64 libgcc-14-dev 14.2.0-3 install ok installed libgcc-s1:amd64 libgcc-s1 14.2.0-3 install ok installed libgcrypt20:amd64 libgcrypt20 1.11.0-6 install ok installed libgfortran5:amd64 libgfortran5 14.2.0-3 install ok installed libglib2.0-0t64:amd64 libglib2.0-0t64 2.82.1-1 install ok installed libglib2.0-data libglib2.0-data 2.82.1-1 install ok installed libglpk40:amd64 libglpk40 5.0-1+b1 install ok installed libgmp10:amd64 libgmp10 2:6.3.0+dfsg-2+b1 install ok installed libgnutls30t64:amd64 libgnutls30t64 3.8.6-2 install ok installed libgomp1:amd64 libgomp1 14.2.0-3 install ok installed libgpg-error0:amd64 libgpg-error0 1.50-4 install ok installed libgpm2:amd64 libgpm2 1.20.7-11 install ok installed libgprofng0:amd64 libgprofng0 2.43.1-3 install ok installed libgraphite2-3:amd64 libgraphite2-3 1.3.14-2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.21.3-3 install ok installed libharfbuzz0b:amd64 libharfbuzz0b 9.0.0-1 install ok installed libhdf5-103-1t64:amd64 libhdf5-103-1t64 1.10.10+repack-4 install ok installed libhogweed6t64:amd64 libhogweed6t64 3.10-1 install ok installed libhwasan0:amd64 libhwasan0 14.2.0-3 install ok installed libicu72:amd64 libicu72 72.1-5 install ok installed libidn2-0:amd64 libidn2-0 2.3.7-2 install ok installed libimagequant0:amd64 libimagequant0 2.18.0-1+b1 install ok installed libisl23:amd64 libisl23 0.27-1 install ok installed libitm1:amd64 libitm1 14.2.0-3 install ok installed libjansson4:amd64 libjansson4 2.14-2+b2 install ok installed libjbig0:amd64 libjbig0 2.1-6.1+b1 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:2.1.5-3 install ok installed libjs-jquery libjs-jquery 3.6.1+dfsg+~3.5.14-1 install ok installed libjs-jquery-ui libjs-jquery-ui 1.13.2+dfsg-1 install ok installed libk5crypto3:amd64 libk5crypto3 1.21.3-3 install ok installed libkeyutils1:amd64 libkeyutils1 1.6.3-3 install ok installed libkrb5-3:amd64 libkrb5-3 1.21.3-3 install ok installed libkrb5support0:amd64 libkrb5support0 1.21.3-3 install ok installed liblapack3:amd64 liblapack3 3.12.0-3 install ok installed liblbfgsb0:amd64 liblbfgsb0 3.0+dfsg.4-1+b1 install ok installed liblcms2-2:amd64 liblcms2-2 2.14-2+b1 install ok installed libldap-2.5-0:amd64 libldap-2.5-0 2.5.18+dfsg-3 install ok installed libldap-common libldap-common 2.5.18+dfsg-3 install ok installed liblerc4:amd64 liblerc4 4.0.0+ds-4+b1 install ok installed liblsan0:amd64 liblsan0 14.2.0-3 install ok installed libltdl7:amd64 libltdl7 2.4.7-7+b1 install ok installed liblz4-1:amd64 liblz4-1 1.9.4-3 install ok installed liblzma5:amd64 liblzma5 5.6.2-2 install ok installed liblzo2-2:amd64 liblzo2-2 2.10-3 install ok installed libmd0:amd64 libmd0 1.1.0-2 install ok installed libmount1:amd64 libmount1 2.40.2-8 install ok installed libmpc3:amd64 libmpc3 1.3.1-1+b2 install ok installed libmpfr6:amd64 libmpfr6 4.2.1-1+b1 install ok installed libncursesw6:amd64 libncursesw6 6.5-2 install ok installed libnettle8t64:amd64 libnettle8t64 3.10-1 install ok installed libnghttp2-14:amd64 libnghttp2-14 1.63.0-1 install ok installed libnsl2:amd64 libnsl2 1.3.0-3+b2 install ok installed libopenjp2-7:amd64 libopenjp2-7 2.5.0-2+b3 install ok installed libp11-kit0:amd64 libp11-kit0 0.25.5-2 install ok installed libpam-modules:amd64 libpam-modules 1.5.3-7 install ok installed libpam-modules-bin libpam-modules-bin 1.5.3-7 install ok installed libpam-runtime libpam-runtime 1.5.3-7 install ok installed libpam0g:amd64 libpam0g 1.5.3-7 install ok installed libpcre2-8-0:amd64 libpcre2-8-0 10.42-4+b1 install ok installed libpng16-16t64:amd64 libpng16-16t64 1.6.44-1 install ok installed libpsl5t64:amd64 libpsl5t64 0.21.2-1.1 install ok installed libpython3-stdlib:amd64 libpython3-stdlib 3.12.5-1+b1 install ok installed libpython3.12-minimal:amd64 libpython3.12-minimal 3.12.6-1 install ok installed libpython3.12-stdlib:amd64 libpython3.12-stdlib 3.12.6-1 install ok installed libpython3.12t64:amd64 libpython3.12t64 3.12.6-1 install ok installed libqhull-r8.0:amd64 libqhull-r8.0 2020.2-6+b1 install ok installed libquadmath0:amd64 libquadmath0 14.2.0-3 install ok installed libraqm0:amd64 libraqm0 0.10.1-1+b1 install ok installed libreadline8t64:amd64 libreadline8t64 8.2-5 install ok installed librtmp1:amd64 librtmp1 2.4+20151223.gitfa8646d.1-2+b4 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.28+dfsg1-8 install ok installed libsasl2-modules:amd64 libsasl2-modules 2.1.28+dfsg1-8 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.28+dfsg1-8 install ok installed libseccomp2:amd64 libseccomp2 2.5.5-1+b1 install ok installed libselinux1:amd64 libselinux1 3.7-3 install ok installed libsemanage-common libsemanage-common 3.7-2 install ok installed libsemanage2:amd64 libsemanage2 3.7-2 install ok installed libsepol2:amd64 libsepol2 3.7-1 install ok installed libsframe1:amd64 libsframe1 2.43.1-3 install ok installed libsharpyuv0:amd64 libsharpyuv0 1.4.0-0.1 install ok installed libsmartcols1:amd64 libsmartcols1 2.40.2-8 install ok installed libsnappy1v5:amd64 libsnappy1v5 1.2.1-1 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.46.0-1 install ok installed libss2:amd64 libss2 1.47.1-1 install ok installed libssh2-1t64:amd64 libssh2-1t64 1.11.0-7 install ok installed libssl3t64:amd64 libssl3t64 3.3.2-1 install ok installed libstdc++-14-dev:amd64 libstdc++-14-dev 14.2.0-3 install ok installed libstdc++6:amd64 libstdc++6 14.2.0-3 install ok installed libsuitesparseconfig7:amd64 libsuitesparseconfig7 1:7.8.2+dfsg-2 install ok installed libsystemd0:amd64 libsystemd0 256.6-1 install ok installed libsz2:amd64 libsz2 1.1.3-1 install ok installed libtasn1-6:amd64 libtasn1-6 4.19.0-3+b2 install ok installed libtcl8.6:amd64 libtcl8.6 8.6.14+dfsg-1 install ok installed libtiff6:amd64 libtiff6 4.5.1+git230720-5 install ok installed libtinfo6:amd64 libtinfo6 6.5-2 install ok installed libtirpc-common libtirpc-common 1.3.4+ds-1.3 install ok installed libtirpc3t64:amd64 libtirpc3t64 1.3.4+ds-1.3 install ok installed libtk8.6:amd64 libtk8.6 8.6.14-1 install ok installed libtsan2:amd64 libtsan2 14.2.0-3 install ok installed libubsan1:amd64 libubsan1 14.2.0-3 install ok installed libudev1:amd64 libudev1 256.6-1 install ok installed libunistring5:amd64 libunistring5 1.2-1 install ok installed libuuid1:amd64 libuuid1 2.40.2-8 install ok installed libwebp7:amd64 libwebp7 1.4.0-0.1 install ok installed libwebpdemux2:amd64 libwebpdemux2 1.4.0-0.1 install ok installed libwebpmux3:amd64 libwebpmux3 1.4.0-0.1 install ok installed libx11-6:amd64 libx11-6 2:1.8.7-1+b1 install ok installed libx11-data libx11-data 2:1.8.7-1 install ok installed libxau6:amd64 libxau6 1:1.0.9-1+b1 install ok installed libxcb1:amd64 libxcb1 1.17.0-2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.2-3+b1 install ok installed libxext6:amd64 libxext6 2:1.3.4-1+b1 install ok installed libxft2:amd64 libxft2 2.3.6-1+b1 install ok installed libxml2:amd64 libxml2 2.9.14+dfsg-1.3+b3 install ok installed libxrender1:amd64 libxrender1 1:0.9.10-1.1+b1 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.35-1.1 install ok installed libxss1:amd64 libxss1 1:1.2.3-1+b1 install ok installed libxxhash0:amd64 libxxhash0 0.8.2-2+b1 install ok installed libzstd1:amd64 libzstd1 1.5.6+dfsg-1 install ok installed linux-libc-dev linux-libc-dev 6.10.9-1 install ok installed login login 1:4.16.0-2+really2.40.2-8 install ok installed login.defs login.defs 1:4.16.0-4 install ok installed logsave logsave 1.47.1-1 install ok installed manpages manpages 6.8-2 install ok installed manpages-dev manpages-dev 6.8-2 install ok installed mawk mawk 1.3.4.20240905-1 install ok installed media-types media-types 10.1.0 install ok installed mount mount 2.40.2-8 install ok installed ncurses-base ncurses-base 6.5-2 install ok installed ncurses-bin ncurses-bin 6.5-2 install ok installed netbase netbase 6.4 install ok installed openssl openssl 3.3.2-1 install ok installed openssl-provider-legacy openssl-provider-legacy 3.3.2-1 install ok installed passwd passwd 1:4.16.0-4 install ok installed perl-base perl-base 5.38.2-5 install ok installed publicsuffix publicsuffix 20231001.0357-0.1 install ok installed python-babel-localedata python-babel-localedata 2.14.0-1 install ok installed python-cobra-data python-cobra-data 0.29.1-1 install ok installed python-matplotlib-data python-matplotlib-data 3.8.3-3 install ok installed python-odf-doc python-odf-doc 1.4.2-2 install ok installed python-odf-tools python-odf-tools 1.4.2-2 install ok installed python-tables-data python-tables-data 3.10.1-1 install ok installed python3 python3 3.12.5-1+b1 install ok installed python3-annotated-types python3-annotated-types 0.7.0-1 install ok installed python3-anyio python3-anyio 4.4.0-1 install ok installed python3-appdirs python3-appdirs 1.4.4-4 install ok installed python3-attr python3-attr 23.2.0-2 install ok installed python3-autocommand python3-autocommand 2.2.2-3 install ok installed python3-babel python3-babel 2.14.0-1 install ok installed python3-bcrypt python3-bcrypt 4.2.0-1 install ok installed python3-bottleneck python3-bottleneck 1.3.8+ds1-1+b1 install ok installed python3-brotli python3-brotli 1.1.0-2+b4 install ok installed python3-bs4 python3-bs4 4.12.3-3 install ok installed python3-certifi python3-certifi 2024.8.30-1 install ok installed python3-cffi-backend:amd64 python3-cffi-backend 1.17.1-1 install ok installed python3-chardet python3-chardet 5.2.0+dfsg-1 install ok installed python3-click python3-click 8.1.7-2 install ok installed python3-cobra python3-cobra 0.29.1-1 install ok installed python3-colorama python3-colorama 0.4.6-4 install ok installed python3-contourpy python3-contourpy 1.3.0-1 install ok installed python3-cpuinfo python3-cpuinfo 9.0.0+git20221119-2 install ok installed python3-cryptography python3-cryptography 43.0.0-1 install ok installed python3-cssselect python3-cssselect 1.2.0-4 install ok installed python3-cycler python3-cycler 0.12.1-1 install ok installed python3-dateutil python3-dateutil 2.9.0-2 install ok installed python3-decorator python3-decorator 5.1.1-5 install ok installed python3-defusedxml python3-defusedxml 0.7.1-2 install ok installed python3-depinfo python3-depinfo 2.2.0-2 install ok installed python3-diskcache python3-diskcache 5.6.3-1 install ok installed python3-dnspython python3-dnspython 2.6.1-1 install ok installed python3-email-validator python3-email-validator 2.2.0-1 install ok installed python3-et-xmlfile python3-et-xmlfile 1.0.1-2.1 install ok installed python3-fonttools python3-fonttools 4.46.0-1+b1 install ok installed python3-fs python3-fs 2.4.16-4 install ok installed python3-h11 python3-h11 0.14.0-1 install ok installed python3-h2 python3-h2 4.1.0-4 install ok installed python3-hpack python3-hpack 4.0.0-2 install ok installed python3-html5lib python3-html5lib 1.1-6 install ok installed python3-httpcore python3-httpcore 1.0.4-1 install ok installed python3-httpx python3-httpx 0.27.0-1 install ok installed python3-hyperframe python3-hyperframe 6.0.0-1 install ok installed python3-idna python3-idna 3.6-2.1 install ok installed python3-importlib-metadata python3-importlib-metadata 8.4.0-1 install ok installed python3-importlib-resources python3-importlib-resources 6.0.1-1 install ok installed python3-inflect python3-inflect 7.3.1-2 install ok installed python3-jaraco.context python3-jaraco.context 6.0.0-1 install ok installed python3-jaraco.functools python3-jaraco.functools 4.0.2-1 install ok installed python3-jinja2 python3-jinja2 3.1.3-1 install ok installed python3-kiwisolver python3-kiwisolver 1.4.5-1+b1 install ok installed python3-lxml:amd64 python3-lxml 5.3.0-1 install ok installed python3-lz4 python3-lz4 4.0.2+dfsg-1+b4 install ok installed python3-markdown-it python3-markdown-it 3.0.0-2 install ok installed python3-markupsafe python3-markupsafe 2.1.5-1+b1 install ok installed python3-matplotlib python3-matplotlib 3.8.3-3 install ok installed python3-mdurl python3-mdurl 0.1.2-1 install ok installed python3-minimal python3-minimal 3.12.5-1+b1 install ok installed python3-more-itertools python3-more-itertools 10.4.0-1 install ok installed python3-mpmath python3-mpmath 1.3.0-1 install ok installed python3-numexpr python3-numexpr 2.10.1-2+b1 install ok installed python3-numpy python3-numpy 1:1.26.4+ds-11 install ok installed python3-odf python3-odf 1.4.2-2 install ok installed python3-olefile python3-olefile 0.46-3 install ok installed python3-openpyxl python3-openpyxl 3.1.5+dfsg-1 install ok installed python3-optlang python3-optlang 1.8.2-2 install ok installed python3-packaging python3-packaging 24.1-1 install ok installed python3-pandas python3-pandas 2.2.2+dfsg-4 install ok installed python3-pandas-lib:amd64 python3-pandas-lib 2.2.2+dfsg-4+b1 install ok installed python3-pil:amd64 python3-pil 10.4.0-1 install ok installed python3-pil.imagetk:amd64 python3-pil.imagetk 10.4.0-1 install ok installed python3-pkg-resources python3-pkg-resources 74.1.2-2 install ok installed python3-platformdirs python3-platformdirs 4.3.2-1 install ok installed python3-pydantic python3-pydantic 2.9.1-2 install ok installed python3-pydantic-core python3-pydantic-core 2.23.4-1 install ok installed python3-pygments python3-pygments 2.18.0+dfsg-1 install ok installed python3-pyparsing python3-pyparsing 3.1.2-1 install ok installed python3-rich python3-rich 13.7.1-1 install ok installed python3-ruamel.yaml python3-ruamel.yaml 0.18.6+ds-3 install ok installed python3-ruamel.yaml.clib:amd64 python3-ruamel.yaml.clib 0.2.8+ds-2 install ok installed python3-sbml5 python3-sbml5 5.20.2+dfsg-8 install ok installed python3-scipy python3-scipy 1.13.1-5 install ok installed python3-six python3-six 1.16.0-7 install ok installed python3-sniffio python3-sniffio 1.3.1-1 install ok installed python3-soupsieve python3-soupsieve 2.6-1 install ok installed python3-swiglpk python3-swiglpk 5.0.10-2 install ok installed python3-sympy python3-sympy 1.13.2-1 install ok installed python3-tables python3-tables 3.10.1-1 install ok installed python3-tables-lib python3-tables-lib 3.10.1-1 install ok installed python3-tabulate python3-tabulate 0.9.0-1 install ok installed python3-tk:amd64 python3-tk 3.12.6-1 install ok installed python3-typeguard python3-typeguard 4.3.0-1 install ok installed python3-typing-extensions python3-typing-extensions 4.12.2-2 install ok installed python3-tz python3-tz 2024.1-2 install ok installed python3-ufolib2 python3-ufolib2 0.16.0+dfsg1-1 install ok installed python3-unicodedata2 python3-unicodedata2 15.1.0+ds-1+b2 install ok installed python3-webencodings python3-webencodings 0.5.1-5 install ok installed python3-zipp python3-zipp 3.20.2-1 install ok installed python3.12 python3.12 3.12.6-1 install ok installed python3.12-minimal python3.12-minimal 3.12.6-1 install ok installed python3.12-tk python3.12-tk 3.12.6-1 install ok installed python3.13-tk python3.13-tk 3.13.0~rc2-1 install ok installed readline-common readline-common 8.2-5 install ok installed rpcsvc-proto rpcsvc-proto 1.4.3-1 install ok installed sed sed 4.9-2 install ok installed shared-mime-info shared-mime-info 2.4-5 install ok installed sysvinit-utils sysvinit-utils 3.10-2 install ok installed tar tar 1.35+dfsg-3 install ok installed tk8.6-blt2.5 tk8.6-blt2.5 2.5.3+dfsg-7 install ok installed tzdata tzdata 2024a-4 install ok installed unicode-data unicode-data 15.1.0-1 install ok installed usr-is-merged usr-is-merged 39 install ok installed util-linux util-linux 2.40.2-8 install ok installed x11-common x11-common 1:7.7+23.1 install ok installed xdg-user-dirs xdg-user-dirs 0.18-1 install ok installed zlib1g:amd64 zlib1g 1:1.3.dfsg+really1.3.1-1 1m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'blt', 'ca-certificates', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-lyx', 'g++-', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'isympy-common', 'isympy3', 'javascript-common', 'krb5-locales', 'libaec0:amd64', 'libamd3:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libblosc2-4:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcolamd3:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4t64:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglpk40:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1t64:amd64', 'libhwasan0:amd64', 'libicu72:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblsan0:amd64', 'libltdl7:amd64', 'liblzo2-2:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libopenjp2-7:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-14-dev:amd64', 'libsuitesparseconfig7:amd64', 'libsz2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'linux-libc-dev', 'manpages', 'manpages-dev', 'media-types', 'netbase', 'openssl', 'publicsuffix', 'python-babel-localedata', 'python-cobra-data', 'python-matplotlib-data', 'python-odf-doc', 'python-odf-tools', 'python-tables-data', 'python3', 'python3-annotated-types', 'python3-anyio', 'python3-appdirs', 'python3-attr', 'python3-autocommand', 'python3-babel', 'python3-bcrypt', 'python3-bottleneck', 'python3-brotli', 'python3-bs4', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-click', 'python3-colorama', 'python3-contourpy', 'python3-cpuinfo', 'python3-cryptography', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-defusedxml', 'python3-depinfo', 'python3-diskcache', 'python3-dnspython', 'python3-email-validator', 'python3-et-xmlfile', 'python3-fonttools', 'python3-fs', 'python3-h11', 'python3-h2', 'python3-hpack', 'python3-html5lib', 'python3-httpcore', 'python3-httpx', 'python3-hyperframe', 'python3-idna', 'python3-importlib-metadata', 'python3-importlib-resources', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jinja2', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-markdown-it', 'python3-markupsafe', 'python3-matplotlib', 'python3-mdurl', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-numexpr', 'python3-numpy', 'python3-odf', 'python3-olefile', 'python3-openpyxl', 'python3-optlang', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-platformdirs', 'python3-pydantic', 'python3-pydantic-core', 'python3-pygments', 'python3-pyparsing', 'python3-rich', 'python3-ruamel.yaml', 'python3-ruamel.yaml.clib:amd64', 'python3-sbml5', 'python3-scipy', 'python3-six', 'python3-sniffio', 'python3-soupsieve', 'python3-swiglpk', 'python3-sympy', 'python3-tables', 'python3-tables-lib', 'python3-tabulate', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-unicodedata2', 'python3-webencodings', 'python3-zipp', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'readline-common', 'rpcsvc-proto', 'shared-mime-info', 'tk8.6-blt2.5', 'unicode-data', 'x11-common', 'xdg-user-dirs', 'python3-cobra'] 1m26.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: binutils binutils-common binutils-x86-64-linux-gnu blt ca-certificates cpp cpp-14 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lyx g++ g++-14 g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc gcc-14 gcc-14-x86-64-linux-gnu gcc-x86-64-linux-gnu isympy-common isympy3 javascript-common krb5-locales libaec0 libamd3 libasan8 libatomic1 libbinutils libblas3 libblosc1 libblosc2-4 libbrotli1 libc-dev-bin libc6-dev libcc1-0 libcolamd3 libcrypt-dev libctf-nobfd0 libctf0 libcurl4t64 libdeflate0 libexpat1 libfontconfig1 libfreetype6 libfribidi0 libgcc-14-dev libgfortran5 libglib2.0-0t64 libglib2.0-data libglpk40 libgomp1 libgpm2 libgprofng0 libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libhdf5-103-1t64 libhwasan0 libicu72 libimagequant0 libisl23 libitm1 libjansson4 libjbig0 libjpeg62-turbo libjs-jquery libjs-jquery-ui libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack3 liblbfgsb0 liblcms2-2 libldap-2.5-0 libldap-common liblerc4 liblsan0 libltdl7 liblzo2-2 libmpc3 libmpfr6 libncursesw6 libnghttp2-14 libnsl2 libopenjp2-7 libpng16-16t64 libpsl5t64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libpython3.12t64 libqhull-r8.0 libquadmath0 libraqm0 libreadline8t64 librtmp1 libsasl2-2 libsasl2-modules libsasl2-modules-db libsframe1 libsharpyuv0 libsnappy1v5 libsqlite3-0 libssh2-1t64 libstdc++-14-dev libsuitesparseconfig7 libsz2 libtcl8.6 libtiff6 libtirpc-common libtirpc3t64 libtk8.6 libtsan2 libubsan1 libwebp7 libwebpdemux2 libwebpmux3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxslt1.1 libxss1 linux-libc-dev manpages manpages-dev media-types netbase openssl publicsuffix python-babel-localedata python-cobra-data python-matplotlib-data python-odf-doc python-odf-tools python-tables-data python3 python3-annotated-types python3-anyio python3-appdirs python3-attr python3-autocommand python3-babel python3-bcrypt python3-bottleneck python3-brotli python3-bs4 python3-certifi python3-cffi-backend python3-chardet python3-click python3-cobra python3-colorama python3-contourpy python3-cpuinfo python3-cryptography python3-cssselect python3-cycler python3-dateutil python3-decorator python3-defusedxml python3-depinfo python3-diskcache python3-dnspython python3-email-validator python3-et-xmlfile python3-fonttools python3-fs python3-h11 python3-h2 python3-hpack python3-html5lib python3-httpcore python3-httpx python3-hyperframe python3-idna python3-importlib-metadata python3-importlib-resources python3-inflect python3-jaraco.context python3-jaraco.functools python3-jinja2 python3-kiwisolver python3-lxml python3-lz4 python3-markdown-it python3-markupsafe python3-matplotlib python3-mdurl python3-minimal python3-more-itertools python3-mpmath python3-numexpr python3-numpy python3-odf python3-olefile python3-openpyxl python3-optlang python3-packaging python3-pandas python3-pandas-lib python3-pil python3-pil.imagetk python3-pkg-resources python3-platformdirs python3-pydantic python3-pydantic-core python3-pygments python3-pyparsing python3-rich python3-ruamel.yaml python3-ruamel.yaml.clib python3-sbml5 python3-scipy python3-six python3-sniffio python3-soupsieve python3-swiglpk python3-sympy python3-tables python3-tables-lib python3-tabulate python3-tk python3-typeguard python3-typing-extensions python3-tz python3-ufolib2 python3-unicodedata2 python3-webencodings python3-zipp python3.12 python3.12-minimal python3.12-tk python3.13-tk readline-common rpcsvc-proto shared-mime-info tk8.6-blt2.5 unicode-data x11-common xdg-user-dirs 0 upgraded, 0 newly installed, 249 to remove and 0 not upgraded. After this operation, 828 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 28456 files and directories currently installed.) Removing g++ (4:14.1.0-2) ... Removing gcc (4:14.1.0-2) ... Removing g++-x86-64-linux-gnu (4:14.1.0-2) ... Removing gcc-x86-64-linux-gnu (4:14.1.0-2) ... Removing g++-14 (14.2.0-3) ... Removing g++-14-x86-64-linux-gnu (14.2.0-3) ... Removing python3-matplotlib (3.8.3-3) ... Removing python3-pil.imagetk:amd64 (10.4.0-1) ... Removing python3-pil:amd64 (10.4.0-1) ... Removing python3-tk:amd64 (3.12.6-1) ... Removing blt (2.5.3+dfsg-7) ... Removing python3-cobra (0.29.1-1) ... Removing python3-httpx (0.27.0-1) ... Removing python3-httpcore (1.0.4-1) ... Removing python3-certifi (2024.8.30-1) ... Removing ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Removing cpp (4:14.1.0-2) ... Removing cpp-x86-64-linux-gnu (4:14.1.0-2) ... Removing tk8.6-blt2.5 (2.5.3+dfsg-7) ... Removing python3.13-tk (3.13.0~rc2-1) ... Removing python-matplotlib-data (3.8.3-3) ... Removing fonts-lyx (2.4.1-2) ... Removing isympy3 (1.13.2-1) ... Removing isympy-common (1.13.2-1) ... Removing javascript-common (11+nmu1) ... Removing krb5-locales (1.21.3-3) ... Removing python3-tables (3.10.1-1) ... Removing python3-tables-lib (3.10.1-1) ... Removing libhdf5-103-1t64:amd64 (1.10.10+repack-4) ... Removing libsz2:amd64 (1.1.3-1) ... Removing libaec0:amd64 (1.1.3-1) ... Removing python3-optlang (1.8.2-2) ... Removing python3-swiglpk (5.0.10-2) ... Removing libglpk40:amd64 (5.0-1+b1) ... Removing libamd3:amd64 (1:7.8.2+dfsg-2) ... Removing libstdc++-14-dev:amd64 (14.2.0-3) ... Removing shared-mime-info (2.4-5) ... Removing libraqm0:amd64 (0.10.1-1+b1) ... Removing libharfbuzz0b:amd64 (9.0.0-1) ... Removing libglib2.0-0t64:amd64 (2.82.1-1) ... Removing python3-pandas (2.2.2+dfsg-4) ... Removing python3-pandas-lib:amd64 (2.2.2+dfsg-4+b1) ... Removing python3-numexpr (2.10.1-2+b1) ... Removing python3-bottleneck (1.3.8+ds1-1+b1) ... Removing libblosc1:amd64 (1.21.5+ds-1+b1) ... Removing libblosc2-4:amd64 (2.15.1+ds-1) ... Removing libcurl4t64:amd64 (8.9.1-2) ... Removing libc6-dev:amd64 (2.40-2) ... Removing libc-dev-bin (2.40-2) ... Removing libcolamd3:amd64 (1:7.8.2+dfsg-2) ... Removing libcrypt-dev:amd64 (1:4.4.36-5) ... Removing libtiff6:amd64 (4.5.1+git230720-5) ... Removing libdeflate0:amd64 (1.21-1) ... Removing python3-ruamel.yaml (0.18.6+ds-3) ... Removing python3-ruamel.yaml.clib:amd64 (0.2.8+ds-2) ... Removing python3-depinfo (2.2.0-2) ... Removing python3-pydantic (2.9.1-2) ... Removing python3-bs4 (4.12.3-3) ... Removing python3-soupsieve (2.6-1) ... Removing python3-rich (13.7.1-1) ... Removing python3-sbml5 (5.20.2+dfsg-8) ... Removing libpython3.12t64:amd64 (3.12.6-1) ... Removing libfribidi0:amd64 (1.0.15-1) ... Removing libglib2.0-data (2.82.1-1) ... Removing libsuitesparseconfig7:amd64 (1:7.8.2+dfsg-2) ... Removing libimagequant0:amd64 (2.18.0-1+b1) ... Removing libgpm2:amd64 (1.20.7-11) ... Removing libgraphite2-3:amd64 (1.3.14-2) ... Removing python3-openpyxl (3.1.5+dfsg-1) ... Removing libjbig0:amd64 (2.1-6.1+b1) ... Removing libjpeg62-turbo:amd64 (1:2.1.5-3) ... Removing python-odf-doc (1.4.2-2) ... Removing libjs-jquery-ui (1.13.2+dfsg-1) ... Removing libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Removing liblcms2-2:amd64 (2.14-2+b1) ... Removing libldap-2.5-0:amd64 (2.5.18+dfsg-3) ... Removing libldap-common (2.5.18+dfsg-3) ... Removing liblerc4:amd64 (4.0.0+ds-4+b1) ... Removing libltdl7:amd64 (2.4.7-7+b1) ... Removing liblzo2-2:amd64 (2.10-3) ... Removing libnghttp2-14:amd64 (1.63.0-1) ... Removing libopenjp2-7:amd64 (2.5.0-2+b3) ... Removing libpsl5t64:amd64 (0.21.2-1.1) ... Removing libqhull-r8.0:amd64 (2020.2-6+b1) ... Removing librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Removing libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Removing libsasl2-modules:amd64 (2.1.28+dfsg1-8) ... Removing libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Removing libwebpmux3:amd64 (1.4.0-0.1) ... Removing libwebpdemux2:amd64 (1.4.0-0.1) ... Removing libwebp7:amd64 (1.4.0-0.1) ... Removing libsharpyuv0:amd64 (1.4.0-0.1) ... Removing libsnappy1v5:amd64 (1.2.1-1) ... Removing libssh2-1t64:amd64 (1.11.0-7) ... Removing python3.12-tk (3.12.6-1) ... Removing linux-libc-dev (6.10.9-1) ... Removing manpages-dev (6.8-2) ... Removing manpages (6.8-2) ... Removing python3-email-validator (2.2.0-1) ... Removing python3-dnspython (2.6.1-1) ... Removing openssl (3.3.2-1) ... Removing publicsuffix (20231001.0357-0.1) ... Removing python3-babel (2.14.0-1) ... Removing python-babel-localedata (2.14.0-1) ... Removing python-cobra-data (0.29.1-1) ... Removing python-odf-tools (1.4.2-2) ... Removing python-tables-data (3.10.1-1) ... Removing python3-annotated-types (0.7.0-1) ... Removing python3-anyio (4.4.0-1) ... Removing python3-cryptography (43.0.0-1) ... Removing python3-bcrypt (4.2.0-1) ... Removing python3-cffi-backend:amd64 (1.17.1-1) ... Removing python3-chardet (5.2.0+dfsg-1) ... Removing python3-click (8.1.7-2) ... Removing python3-colorama (0.4.6-4) ... Removing python3-contourpy (1.3.0-1) ... Removing python3-cpuinfo (9.0.0+git20221119-2) ... Removing python3-cssselect (1.2.0-4) ... Removing python3-cycler (0.12.1-1) ... Removing python3-dateutil (2.9.0-2) ... Removing python3-odf (1.4.2-2) ... Removing python3-defusedxml (0.7.1-2) ... Removing python3-diskcache (5.6.3-1) ... Removing python3-et-xmlfile (1.0.1-2.1) ... Removing python3-h11 (0.14.0-1) ... Removing python3-h2 (4.1.0-4) ... Removing python3-hpack (4.0.0-2) ... Removing python3-html5lib (1.1-6) ... Removing python3-hyperframe (6.0.0-1) ... Removing python3-idna (3.6-2.1) ... Removing python3-importlib-metadata (8.4.0-1) ... Removing python3-importlib-resources (6.0.1-1) ... Removing python3-jinja2 (3.1.3-1) ... Removing python3-kiwisolver (1.4.5-1+b1) ... Removing python3-markdown-it (3.0.0-2) ... Removing python3-markupsafe (2.1.5-1+b1) ... Removing python3-mdurl (0.1.2-1) ... Removing python3-olefile (0.46-3) ... Removing python3-packaging (24.1-1) ... Removing python3-platformdirs (4.3.2-1) ... Removing python3-pydantic-core (2.23.4-1) ... Removing python3-pygments (2.18.0+dfsg-1) ... Removing python3-pyparsing (3.1.2-1) ... Removing python3-sniffio (1.3.1-1) ... Removing python3-tabulate (0.9.0-1) ... Removing python3-webencodings (0.5.1-5) ... Removing python3-zipp (3.20.2-1) ... Removing rpcsvc-proto (1.4.3-1) ... Removing xdg-user-dirs (0.18-1) ... Removing gcc-14 (14.2.0-3) ... Removing binutils (2.43.1-3) ... Removing gcc-14-x86-64-linux-gnu (14.2.0-3) ... Removing binutils-x86-64-linux-gnu (2.43.1-3) ... Removing libgprofng0:amd64 (2.43.1-3) ... Removing libctf0:amd64 (2.43.1-3) ... Removing libbinutils:amd64 (2.43.1-3) ... Removing binutils-common:amd64 (2.43.1-3) ... Removing cpp-14 (14.2.0-3) ... Removing cpp-14-x86-64-linux-gnu (14.2.0-3) ... Removing libtk8.6:amd64 (8.6.14-1) ... Removing libxft2:amd64 (2.3.6-1+b1) ... Removing libfontconfig1:amd64 (2.15.0-1.1) ... Removing fontconfig-config (2.15.0-1.1) ... Removing fonts-dejavu-core (2.37-8) ... Removing fonts-dejavu-mono (2.37-8) ... Removing libgcc-14-dev:amd64 (14.2.0-3) ... Removing libasan8:amd64 (14.2.0-3) ... Removing libatomic1:amd64 (14.2.0-3) ... Removing libfreetype6:amd64 (2.13.3+dfsg-1) ... Removing libbrotli1:amd64 (1.1.0-2+b4) ... Removing libcc1-0:amd64 (14.2.0-3) ... Removing libctf-nobfd0:amd64 (2.43.1-3) ... Removing libgomp1:amd64 (14.2.0-3) ... Removing libhwasan0:amd64 (14.2.0-3) ... Removing libisl23:amd64 (0.27-1) ... Removing libitm1:amd64 (14.2.0-3) ... Removing libjansson4:amd64 (2.14-2+b2) ... Removing liblsan0:amd64 (14.2.0-3) ... Removing libmpc3:amd64 (1.3.1-1+b2) ... Removing libmpfr6:amd64 (4.2.1-1+b1) ... Removing libpng16-16t64:amd64 (1.6.44-1) ... Removing libquadmath0:amd64 (14.2.0-3) ... Removing libsframe1:amd64 (2.43.1-3) ... Removing libtcl8.6:amd64 (8.6.14+dfsg-1) ... Removing libtsan2:amd64 (14.2.0-3) ... Removing libubsan1:amd64 (14.2.0-3) ... Removing libxss1:amd64 (1:1.2.3-1+b1) ... Removing libxrender1:amd64 (1:0.9.10-1.1+b1) ... Removing libxext6:amd64 (2:1.3.4-1+b1) ... Removing x11-common (1:7.7+23.1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of stop. Removing libx11-6:amd64 (2:1.8.7-1+b1) ... Removing libx11-data (2:1.8.7-1) ... Removing libxcb1:amd64 (1.17.0-2) ... Removing libxau6:amd64 (1:1.0.9-1+b1) ... Removing libxdmcp6:amd64 (1:1.1.2-3+b1) ... Removing python3-ufolib2 (0.16.0+dfsg1-1) ... Removing python3-attr (23.2.0-2) ... Removing python3-fonttools (4.46.0-1+b1) ... Removing python3-scipy (1.13.1-5) ... Removing python3-numpy (1:1.26.4+ds-11) ... Removing liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Removing liblapack3:amd64 (3.12.0-3) ... Removing libblas3:amd64 (3.12.0-3) ... Removing python3-sympy (1.13.2-1) ... Removing python3-fs (2.4.16-4) ... Removing python3-pkg-resources (74.1.2-2) ... Removing python3-unicodedata2 (15.1.0+ds-1+b2) ... Removing libgfortran5:amd64 (14.2.0-3) ... Removing python3-lxml:amd64 (5.3.0-1) ... Removing libxslt1.1:amd64 (1.1.35-1.1) ... Removing libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Removing libicu72:amd64 (72.1-5) ... Removing python3-appdirs (1.4.4-4) ... Removing python3-autocommand (2.2.2-3) ... Removing python3-brotli (1.1.0-2+b4) ... Removing python3-decorator (5.1.1-5) ... Removing python3-inflect (7.3.1-2) ... Removing python3-typeguard (4.3.0-1) ... Removing python3-jaraco.context (6.0.0-1) ... Removing python3-jaraco.functools (4.0.2-1) ... Removing python3-lz4 (4.0.2+dfsg-1+b4) ... Removing python3-more-itertools (10.4.0-1) ... Removing python3-mpmath (1.3.0-1) ... Removing python3-six (1.16.0-7) ... Removing python3-typing-extensions (4.12.2-2) ... Removing python3-tz (2024.1-2) ... Removing unicode-data (15.1.0-1) ... Removing python3 (3.12.5-1+b1) ... Removing python3.12 (3.12.6-1) ... Removing python3-minimal (3.12.5-1+b1) ... Removing python3.12-minimal (3.12.6-1) ... Removing libexpat1:amd64 (2.6.3-1) ... Removing libpython3-stdlib:amd64 (3.12.5-1+b1) ... Removing libpython3.12-stdlib:amd64 (3.12.6-1) ... find: '/usr/lib/python3': No such file or directory Removing libnsl2:amd64 (1.3.0-3+b2) ... Removing libtirpc3t64:amd64 (1.3.4+ds-1.3) ... Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Removing 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Removing libgssapi-krb5-2:amd64 (1.21.3-3) ... Removing libkrb5-3:amd64 (1.21.3-3) ... Removing libk5crypto3:amd64 (1.21.3-3) ... Removing libkeyutils1:amd64 (1.6.3-3) ... Removing libkrb5support0:amd64 (1.21.3-3) ... Removing libncursesw6:amd64 (6.5-2) ... Removing libpython3.12-minimal:amd64 (3.12.6-1) ... find: '/usr/lib/python3': No such file or directory Removing libreadline8t64:amd64 (8.2-5) ... Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Removing 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Removing libsqlite3-0:amd64 (3.46.0-1) ... Removing libtirpc-common (1.3.4+ds-1.3) ... Removing media-types (10.1.0) ... Removing netbase (6.4) ... Removing readline-common (8.2-5) ... Processing triggers for libc-bin (2.40-2) ... 1m26.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', 'remove', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'blt', 'ca-certificates', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-lyx', 'g++-', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'isympy-common', 'isympy3', 'javascript-common', 'krb5-locales', 'libaec0:amd64', 'libamd3:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libblosc2-4:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcolamd3:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4t64:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglpk40:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1t64:amd64', 'libhwasan0:amd64', 'libicu72:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblsan0:amd64', 'libltdl7:amd64', 'liblzo2-2:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libopenjp2-7:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-14-dev:amd64', 'libsuitesparseconfig7:amd64', 'libsz2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'linux-libc-dev', 'manpages', 'manpages-dev', 'media-types', 'netbase', 'openssl', 'publicsuffix', 'python-babel-localedata', 'python-cobra-data', 'python-matplotlib-data', 'python-odf-doc', 'python-odf-tools', 'python-tables-data', 'python3', 'python3-annotated-types', 'python3-anyio', 'python3-appdirs', 'python3-attr', 'python3-autocommand', 'python3-babel', 'python3-bcrypt', 'python3-bottleneck', 'python3-brotli', 'python3-bs4', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-click', 'python3-colorama', 'python3-contourpy', 'python3-cpuinfo', 'python3-cryptography', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-defusedxml', 'python3-depinfo', 'python3-diskcache', 'python3-dnspython', 'python3-email-validator', 'python3-et-xmlfile', 'python3-fonttools', 'python3-fs', 'python3-h11', 'python3-h2', 'python3-hpack', 'python3-html5lib', 'python3-httpcore', 'python3-httpx', 'python3-hyperframe', 'python3-idna', 'python3-importlib-metadata', 'python3-importlib-resources', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jinja2', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-markdown-it', 'python3-markupsafe', 'python3-matplotlib', 'python3-mdurl', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-numexpr', 'python3-numpy', 'python3-odf', 'python3-olefile', 'python3-openpyxl', 'python3-optlang', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-platformdirs', 'python3-pydantic', 'python3-pydantic-core', 'python3-pygments', 'python3-pyparsing', 'python3-rich', 'python3-ruamel.yaml', 'python3-ruamel.yaml.clib:amd64', 'python3-sbml5', 'python3-scipy', 'python3-six', 'python3-sniffio', 'python3-soupsieve', 'python3-swiglpk', 'python3-sympy', 'python3-tables', 'python3-tables-lib', 'python3-tabulate', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-unicodedata2', 'python3-webencodings', 'python3-zipp', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'readline-common', 'rpcsvc-proto', 'shared-mime-info', 'tk8.6-blt2.5', 'unicode-data', 'x11-common', 'xdg-user-dirs', 'python3-cobra'] 1m26.6s INFO: Running scripts post_remove 1m26.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_remove_exceptions'] 1m26.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_remove_exceptions'] 1m26.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'blt', 'ca-certificates', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-lyx', 'g++', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'isympy-common', 'isympy3', 'javascript-common', 'krb5-locales', 'libaec0:amd64', 'libamd3:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libblosc2-4:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcolamd3:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4t64:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglpk40:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1t64:amd64', 'libhwasan0:amd64', 'libicu72:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblsan0:amd64', 'libltdl7:amd64', 'liblzo2-2:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libopenjp2-7:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-14-dev:amd64', 'libsuitesparseconfig7:amd64', 'libsz2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'linux-libc-dev', 'manpages', 'manpages-dev', 'media-types', 'netbase', 'openssl', 'publicsuffix', 'python-babel-localedata', 'python-cobra-data', 'python-matplotlib-data', 'python-odf-doc', 'python-odf-tools', 'python-tables-data', 'python3', 'python3-annotated-types', 'python3-anyio', 'python3-appdirs', 'python3-attr', 'python3-autocommand', 'python3-babel', 'python3-bcrypt', 'python3-bottleneck', 'python3-brotli', 'python3-bs4', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-click', 'python3-colorama', 'python3-contourpy', 'python3-cpuinfo', 'python3-cryptography', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-defusedxml', 'python3-depinfo', 'python3-diskcache', 'python3-dnspython', 'python3-email-validator', 'python3-et-xmlfile', 'python3-fonttools', 'python3-fs', 'python3-h11', 'python3-h2', 'python3-hpack', 'python3-html5lib', 'python3-httpcore', 'python3-httpx', 'python3-hyperframe', 'python3-idna', 'python3-importlib-metadata', 'python3-importlib-resources', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jinja2', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-markdown-it', 'python3-markupsafe', 'python3-matplotlib', 'python3-mdurl', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-numexpr', 'python3-numpy', 'python3-odf', 'python3-olefile', 'python3-openpyxl', 'python3-optlang', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-platformdirs', 'python3-pydantic', 'python3-pydantic-core', 'python3-pygments', 'python3-pyparsing', 'python3-rich', 'python3-ruamel.yaml', 'python3-ruamel.yaml.clib:amd64', 'python3-sbml5', 'python3-scipy', 'python3-six', 'python3-sniffio', 'python3-soupsieve', 'python3-swiglpk', 'python3-sympy', 'python3-tables', 'python3-tables-lib', 'python3-tabulate', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-unicodedata2', 'python3-webencodings', 'python3-zipp', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'readline-common', 'rpcsvc-proto', 'shared-mime-info', 'tk8.6-blt2.5', 'unicode-data', 'x11-common', 'xdg-user-dirs'] 1m27.0s DUMP: dpkg: warning: ignoring request to remove binutils which isn't installed (Reading database ... 5208 files and directories currently installed.) Purging configuration files for binutils-common:amd64 (2.43.1-3) ... dpkg: warning: ignoring request to remove binutils-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove blt which isn't installed Purging configuration files for ca-certificates (20240203) ... Removing dangling symlinks from /etc/ssl/certs... done. Purging configuration files for cpp (4:14.1.0-2) ... dpkg: warning: ignoring request to remove cpp-14 which isn't installed dpkg: warning: ignoring request to remove cpp-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove cpp-x86-64-linux-gnu which isn't installed Purging configuration files for fontconfig-config (2.15.0-1.1) ... dpkg: warning: while removing fontconfig-config, directory '/etc/fonts/conf.d' not empty so not removed Purging configuration files for fonts-dejavu-core (2.37-8) ... Purging configuration files for fonts-dejavu-mono (2.37-8) ... dpkg: warning: while removing fonts-dejavu-mono, directory '/etc/fonts' not empty so not removed dpkg: warning: ignoring request to remove fonts-lyx which isn't installed dpkg: warning: ignoring request to remove g++ which isn't installed dpkg: warning: ignoring request to remove g++-14 which isn't installed dpkg: warning: ignoring request to remove g++-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove g++-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gcc which isn't installed dpkg: warning: ignoring request to remove gcc-14 which isn't installed dpkg: warning: ignoring request to remove gcc-14-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove gcc-x86-64-linux-gnu which isn't installed dpkg: warning: ignoring request to remove isympy-common which isn't installed dpkg: warning: ignoring request to remove isympy3 which isn't installed Purging configuration files for javascript-common (11+nmu1) ... dpkg: warning: ignoring request to remove krb5-locales which isn't installed dpkg: warning: ignoring request to remove libaec0 which isn't installed dpkg: warning: ignoring request to remove libamd3 which isn't installed dpkg: warning: ignoring request to remove libasan8 which isn't installed dpkg: warning: ignoring request to remove libatomic1 which isn't installed dpkg: warning: ignoring request to remove libbinutils which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed dpkg: warning: ignoring request to remove libblosc1 which isn't installed dpkg: warning: ignoring request to remove libblosc2-4 which isn't installed dpkg: warning: ignoring request to remove libbrotli1 which isn't installed dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove libc6-dev which isn't installed dpkg: warning: ignoring request to remove libcc1-0 which isn't installed dpkg: warning: ignoring request to remove libcolamd3 which isn't installed Purging configuration files for libcrypt-dev:amd64 (1:4.4.36-5) ... dpkg: warning: ignoring request to remove libctf-nobfd0 which isn't installed dpkg: warning: ignoring request to remove libctf0 which isn't installed dpkg: warning: ignoring request to remove libcurl4t64 which isn't installed dpkg: warning: ignoring request to remove libdeflate0 which isn't installed dpkg: warning: ignoring request to remove libexpat1 which isn't installed dpkg: warning: ignoring request to remove libfontconfig1 which isn't installed dpkg: warning: ignoring request to remove libfreetype6 which isn't installed dpkg: warning: ignoring request to remove libfribidi0 which isn't installed dpkg: warning: ignoring request to remove libgcc-14-dev which isn't installed dpkg: warning: ignoring request to remove libgfortran5 which isn't installed Purging configuration files for libglib2.0-0t64:amd64 (2.82.1-1) ... dpkg: warning: ignoring request to remove libglib2.0-data which isn't installed dpkg: warning: ignoring request to remove libglpk40 which isn't installed dpkg: warning: ignoring request to remove libgomp1 which isn't installed dpkg: warning: ignoring request to remove libgpm2 which isn't installed dpkg: warning: ignoring request to remove libgprofng0 which isn't installed dpkg: warning: ignoring request to remove libgraphite2-3 which isn't installed Purging configuration files for libgssapi-krb5-2:amd64 (1.21.3-3) ... dpkg: warning: ignoring request to remove libharfbuzz0b which isn't installed dpkg: warning: ignoring request to remove libhdf5-103-1t64 which isn't installed dpkg: warning: ignoring request to remove libhwasan0 which isn't installed dpkg: warning: ignoring request to remove libicu72 which isn't installed dpkg: warning: ignoring request to remove libimagequant0 which isn't installed dpkg: warning: ignoring request to remove libisl23 which isn't installed dpkg: warning: ignoring request to remove libitm1 which isn't installed dpkg: warning: ignoring request to remove libjansson4 which isn't installed dpkg: warning: ignoring request to remove libjbig0 which isn't installed dpkg: warning: ignoring request to remove libjpeg62-turbo which isn't installed Purging configuration files for libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... dpkg: warning: ignoring request to remove libjs-jquery-ui which isn't installed dpkg: warning: ignoring request to remove libk5crypto3 which isn't installed dpkg: warning: ignoring request to remove libkeyutils1 which isn't installed dpkg: warning: ignoring request to remove libkrb5-3 which isn't installed dpkg: warning: ignoring request to remove libkrb5support0 which isn't installed dpkg: warning: ignoring request to remove liblapack3 which isn't installed dpkg: warning: ignoring request to remove liblbfgsb0 which isn't installed dpkg: warning: ignoring request to remove liblcms2-2 which isn't installed dpkg: warning: ignoring request to remove libldap-2.5-0 which isn't installed Purging configuration files for libldap-common (2.5.18+dfsg-3) ... dpkg: warning: ignoring request to remove liblerc4 which isn't installed dpkg: warning: ignoring request to remove liblsan0 which isn't installed dpkg: warning: ignoring request to remove libltdl7 which isn't installed dpkg: warning: ignoring request to remove liblzo2-2 which isn't installed dpkg: warning: ignoring request to remove libmpc3 which isn't installed dpkg: warning: ignoring request to remove libmpfr6 which isn't installed dpkg: warning: ignoring request to remove libncursesw6 which isn't installed dpkg: warning: ignoring request to remove libnghttp2-14 which isn't installed dpkg: warning: ignoring request to remove libnsl2 which isn't installed dpkg: warning: ignoring request to remove libopenjp2-7 which isn't installed dpkg: warning: ignoring request to remove libpng16-16t64 which isn't installed dpkg: warning: ignoring request to remove libpsl5t64 which isn't installed dpkg: warning: ignoring request to remove libpython3-stdlib which isn't installed Purging configuration files for libpython3.12-minimal:amd64 (3.12.6-1) ... dpkg: warning: ignoring request to remove libpython3.12-stdlib which isn't installed dpkg: warning: ignoring request to remove libpython3.12t64 which isn't installed dpkg: warning: ignoring request to remove libqhull-r8.0 which isn't installed dpkg: warning: ignoring request to remove libquadmath0 which isn't installed dpkg: warning: ignoring request to remove libraqm0 which isn't installed Purging configuration files for libreadline8t64:amd64 (8.2-5) ... dpkg: warning: ignoring request to remove librtmp1 which isn't installed dpkg: warning: ignoring request to remove libsasl2-2 which isn't installed Purging configuration files for libsasl2-modules:amd64 (2.1.28+dfsg1-8) ... dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed dpkg: warning: ignoring request to remove libsframe1 which isn't installed dpkg: warning: ignoring request to remove libsharpyuv0 which isn't installed dpkg: warning: ignoring request to remove libsnappy1v5 which isn't installed dpkg: warning: ignoring request to remove libsqlite3-0 which isn't installed dpkg: warning: ignoring request to remove libssh2-1t64 which isn't installed dpkg: warning: ignoring request to remove libstdc++-14-dev which isn't installed dpkg: warning: ignoring request to remove libsuitesparseconfig7 which isn't installed dpkg: warning: ignoring request to remove libsz2 which isn't installed dpkg: warning: ignoring request to remove libtcl8.6 which isn't installed dpkg: warning: ignoring request to remove libtiff6 which isn't installed Purging configuration files for libtirpc-common (1.3.4+ds-1.3) ... Purging configuration files for libtirpc3t64:amd64 (1.3.4+ds-1.3) ... dpkg: warning: ignoring request to remove libtk8.6 which isn't installed dpkg: warning: ignoring request to remove libtsan2 which isn't installed dpkg: warning: ignoring request to remove libubsan1 which isn't installed dpkg: warning: ignoring request to remove libwebp7 which isn't installed dpkg: warning: ignoring request to remove libwebpdemux2 which isn't installed dpkg: warning: ignoring request to remove libwebpmux3 which isn't installed dpkg: warning: ignoring request to remove libx11-6 which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libxau6 which isn't installed dpkg: warning: ignoring request to remove libxcb1 which isn't installed dpkg: warning: ignoring request to remove libxdmcp6 which isn't installed dpkg: warning: ignoring request to remove libxext6 which isn't installed dpkg: warning: ignoring request to remove libxft2 which isn't installed dpkg: warning: ignoring request to remove libxml2 which isn't installed dpkg: warning: ignoring request to remove libxrender1 which isn't installed dpkg: warning: ignoring request to remove libxslt1.1 which isn't installed dpkg: warning: ignoring request to remove libxss1 which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed dpkg: warning: ignoring request to remove manpages which isn't installed dpkg: warning: ignoring request to remove manpages-dev which isn't installed Purging configuration files for media-types (10.1.0) ... Purging configuration files for netbase (6.4) ... Purging configuration files for openssl (3.3.2-1) ... dpkg: warning: ignoring request to remove publicsuffix which isn't installed dpkg: warning: ignoring request to remove python-babel-localedata which isn't installed dpkg: warning: ignoring request to remove python-cobra-data which isn't installed Purging configuration files for python-matplotlib-data (3.8.3-3) ... dpkg: warning: ignoring request to remove python-odf-doc which isn't installed dpkg: warning: ignoring request to remove python-odf-tools which isn't installed dpkg: warning: ignoring request to remove python-tables-data which isn't installed Purging configuration files for python3 (3.12.5-1+b1) ... dpkg: warning: ignoring request to remove python3-annotated-types which isn't installed dpkg: warning: ignoring request to remove python3-anyio which isn't installed dpkg: warning: ignoring request to remove python3-appdirs which isn't installed dpkg: warning: ignoring request to remove python3-attr which isn't installed dpkg: warning: ignoring request to remove python3-autocommand which isn't installed dpkg: warning: ignoring request to remove python3-babel which isn't installed dpkg: warning: ignoring request to remove python3-bcrypt which isn't installed dpkg: warning: ignoring request to remove python3-bottleneck which isn't installed dpkg: warning: ignoring request to remove python3-brotli which isn't installed dpkg: warning: ignoring request to remove python3-bs4 which isn't installed dpkg: warning: ignoring request to remove python3-certifi which isn't installed dpkg: warning: ignoring request to remove python3-cffi-backend which isn't installed dpkg: warning: ignoring request to remove python3-chardet which isn't installed dpkg: warning: ignoring request to remove python3-click which isn't installed dpkg: warning: ignoring request to remove python3-colorama which isn't installed dpkg: warning: ignoring request to remove python3-contourpy which isn't installed dpkg: warning: ignoring request to remove python3-cpuinfo which isn't installed dpkg: warning: ignoring request to remove python3-cryptography which isn't installed dpkg: warning: ignoring request to remove python3-cssselect which isn't installed dpkg: warning: ignoring request to remove python3-cycler which isn't installed dpkg: warning: ignoring request to remove python3-dateutil which isn't installed dpkg: warning: ignoring request to remove python3-decorator which isn't installed dpkg: warning: ignoring request to remove python3-defusedxml which isn't installed dpkg: warning: ignoring request to remove python3-depinfo which isn't installed dpkg: warning: ignoring request to remove python3-diskcache which isn't installed dpkg: warning: ignoring request to remove python3-dnspython which isn't installed dpkg: warning: ignoring request to remove python3-email-validator which isn't installed dpkg: warning: ignoring request to remove python3-et-xmlfile which isn't installed dpkg: warning: ignoring request to remove python3-fonttools which isn't installed dpkg: warning: ignoring request to remove python3-fs which isn't installed dpkg: warning: ignoring request to remove python3-h11 which isn't installed dpkg: warning: ignoring request to remove python3-h2 which isn't installed dpkg: warning: ignoring request to remove python3-hpack which isn't installed dpkg: warning: ignoring request to remove python3-html5lib which isn't installed dpkg: warning: ignoring request to remove python3-httpcore which isn't installed dpkg: warning: ignoring request to remove python3-httpx which isn't installed dpkg: warning: ignoring request to remove python3-hyperframe which isn't installed dpkg: warning: ignoring request to remove python3-idna which isn't installed dpkg: warning: ignoring request to remove python3-importlib-metadata which isn't installed dpkg: warning: ignoring request to remove python3-importlib-resources which isn't installed dpkg: warning: ignoring request to remove python3-inflect which isn't installed dpkg: warning: ignoring request to remove python3-jaraco.context which isn't installed dpkg: warning: ignoring request to remove python3-jaraco.functools which isn't installed dpkg: warning: ignoring request to remove python3-jinja2 which isn't installed dpkg: warning: ignoring request to remove python3-kiwisolver which isn't installed dpkg: warning: ignoring request to remove python3-lxml which isn't installed dpkg: warning: ignoring request to remove python3-lz4 which isn't installed dpkg: warning: ignoring request to remove python3-markdown-it which isn't installed dpkg: warning: ignoring request to remove python3-markupsafe which isn't installed dpkg: warning: ignoring request to remove python3-matplotlib which isn't installed dpkg: warning: ignoring request to remove python3-mdurl which isn't installed dpkg: warning: ignoring request to remove python3-minimal which isn't installed dpkg: warning: ignoring request to remove python3-more-itertools which isn't installed dpkg: warning: ignoring request to remove python3-mpmath which isn't installed dpkg: warning: ignoring request to remove python3-numexpr which isn't installed dpkg: warning: ignoring request to remove python3-numpy which isn't installed dpkg: warning: ignoring request to remove python3-odf which isn't installed dpkg: warning: ignoring request to remove python3-olefile which isn't installed dpkg: warning: ignoring request to remove python3-openpyxl which isn't installed dpkg: warning: ignoring request to remove python3-optlang which isn't installed dpkg: warning: ignoring request to remove python3-packaging which isn't installed dpkg: warning: ignoring request to remove python3-pandas which isn't installed dpkg: warning: ignoring request to remove python3-pandas-lib which isn't installed dpkg: warning: ignoring request to remove python3-pil which isn't installed dpkg: warning: ignoring request to remove python3-pil.imagetk which isn't installed dpkg: warning: ignoring request to remove python3-pkg-resources which isn't installed dpkg: warning: ignoring request to remove python3-platformdirs which isn't installed dpkg: warning: ignoring request to remove python3-pydantic which isn't installed dpkg: warning: ignoring request to remove python3-pydantic-core which isn't installed dpkg: warning: ignoring request to remove python3-pygments which isn't installed dpkg: warning: ignoring request to remove python3-pyparsing which isn't installed dpkg: warning: ignoring request to remove python3-rich which isn't installed dpkg: warning: ignoring request to remove python3-ruamel.yaml which isn't installed dpkg: warning: ignoring request to remove python3-ruamel.yaml.clib which isn't installed dpkg: warning: ignoring request to remove python3-sbml5 which isn't installed dpkg: warning: ignoring request to remove python3-scipy which isn't installed dpkg: warning: ignoring request to remove python3-six which isn't installed dpkg: warning: ignoring request to remove python3-sniffio which isn't installed dpkg: warning: ignoring request to remove python3-soupsieve which isn't installed dpkg: warning: ignoring request to remove python3-swiglpk which isn't installed Purging configuration files for python3-sympy (1.13.2-1) ... dpkg: warning: ignoring request to remove python3-tables which isn't installed dpkg: warning: ignoring request to remove python3-tables-lib which isn't installed dpkg: warning: ignoring request to remove python3-tabulate which isn't installed dpkg: warning: ignoring request to remove python3-tk which isn't installed dpkg: warning: ignoring request to remove python3-typeguard which isn't installed dpkg: warning: ignoring request to remove python3-typing-extensions which isn't installed dpkg: warning: ignoring request to remove python3-tz which isn't installed dpkg: warning: ignoring request to remove python3-ufolib2 which isn't installed dpkg: warning: ignoring request to remove python3-unicodedata2 which isn't installed dpkg: warning: ignoring request to remove python3-webencodings which isn't installed dpkg: warning: ignoring request to remove python3-zipp which isn't installed dpkg: warning: ignoring request to remove python3.12 which isn't installed Purging configuration files for python3.12-minimal (3.12.6-1) ... dpkg: warning: ignoring request to remove python3.12-tk which isn't installed dpkg: warning: ignoring request to remove python3.13-tk which isn't installed Purging configuration files for readline-common (8.2-5) ... dpkg: warning: ignoring request to remove rpcsvc-proto which isn't installed Purging configuration files for shared-mime-info (2.4-5) ... dpkg: warning: ignoring request to remove tk8.6-blt2.5 which isn't installed dpkg: warning: ignoring request to remove unicode-data which isn't installed Purging configuration files for x11-common (1:7.7+23.1) ... Purging configuration files for xdg-user-dirs (0.18-1) ... 1m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg', '--purge', 'binutils', 'binutils-common:amd64', 'binutils-x86-64-linux-gnu', 'blt', 'ca-certificates', 'cpp', 'cpp-14', 'cpp-14-x86-64-linux-gnu', 'cpp-x86-64-linux-gnu', 'fontconfig-config', 'fonts-dejavu-core', 'fonts-dejavu-mono', 'fonts-lyx', 'g++', 'g++-14', 'g++-14-x86-64-linux-gnu', 'g++-x86-64-linux-gnu', 'gcc', 'gcc-14', 'gcc-14-x86-64-linux-gnu', 'gcc-x86-64-linux-gnu', 'isympy-common', 'isympy3', 'javascript-common', 'krb5-locales', 'libaec0:amd64', 'libamd3:amd64', 'libasan8:amd64', 'libatomic1:amd64', 'libbinutils:amd64', 'libblas3:amd64', 'libblosc1:amd64', 'libblosc2-4:amd64', 'libbrotli1:amd64', 'libc-dev-bin', 'libc6-dev:amd64', 'libcc1-0:amd64', 'libcolamd3:amd64', 'libcrypt-dev:amd64', 'libctf-nobfd0:amd64', 'libctf0:amd64', 'libcurl4t64:amd64', 'libdeflate0:amd64', 'libexpat1:amd64', 'libfontconfig1:amd64', 'libfreetype6:amd64', 'libfribidi0:amd64', 'libgcc-14-dev:amd64', 'libgfortran5:amd64', 'libglib2.0-0t64:amd64', 'libglib2.0-data', 'libglpk40:amd64', 'libgomp1:amd64', 'libgpm2:amd64', 'libgprofng0:amd64', 'libgraphite2-3:amd64', 'libgssapi-krb5-2:amd64', 'libharfbuzz0b:amd64', 'libhdf5-103-1t64:amd64', 'libhwasan0:amd64', 'libicu72:amd64', 'libimagequant0:amd64', 'libisl23:amd64', 'libitm1:amd64', 'libjansson4:amd64', 'libjbig0:amd64', 'libjpeg62-turbo:amd64', 'libjs-jquery', 'libjs-jquery-ui', 'libk5crypto3:amd64', 'libkeyutils1:amd64', 'libkrb5-3:amd64', 'libkrb5support0:amd64', 'liblapack3:amd64', 'liblbfgsb0:amd64', 'liblcms2-2:amd64', 'libldap-2.5-0:amd64', 'libldap-common', 'liblerc4:amd64', 'liblsan0:amd64', 'libltdl7:amd64', 'liblzo2-2:amd64', 'libmpc3:amd64', 'libmpfr6:amd64', 'libncursesw6:amd64', 'libnghttp2-14:amd64', 'libnsl2:amd64', 'libopenjp2-7:amd64', 'libpng16-16t64:amd64', 'libpsl5t64:amd64', 'libpython3-stdlib:amd64', 'libpython3.12-minimal:amd64', 'libpython3.12-stdlib:amd64', 'libpython3.12t64:amd64', 'libqhull-r8.0:amd64', 'libquadmath0:amd64', 'libraqm0:amd64', 'libreadline8t64:amd64', 'librtmp1:amd64', 'libsasl2-2:amd64', 'libsasl2-modules:amd64', 'libsasl2-modules-db:amd64', 'libsframe1:amd64', 'libsharpyuv0:amd64', 'libsnappy1v5:amd64', 'libsqlite3-0:amd64', 'libssh2-1t64:amd64', 'libstdc++-14-dev:amd64', 'libsuitesparseconfig7:amd64', 'libsz2:amd64', 'libtcl8.6:amd64', 'libtiff6:amd64', 'libtirpc-common', 'libtirpc3t64:amd64', 'libtk8.6:amd64', 'libtsan2:amd64', 'libubsan1:amd64', 'libwebp7:amd64', 'libwebpdemux2:amd64', 'libwebpmux3:amd64', 'libx11-6:amd64', 'libx11-data', 'libxau6:amd64', 'libxcb1:amd64', 'libxdmcp6:amd64', 'libxext6:amd64', 'libxft2:amd64', 'libxml2:amd64', 'libxrender1:amd64', 'libxslt1.1:amd64', 'libxss1:amd64', 'linux-libc-dev', 'manpages', 'manpages-dev', 'media-types', 'netbase', 'openssl', 'publicsuffix', 'python-babel-localedata', 'python-cobra-data', 'python-matplotlib-data', 'python-odf-doc', 'python-odf-tools', 'python-tables-data', 'python3', 'python3-annotated-types', 'python3-anyio', 'python3-appdirs', 'python3-attr', 'python3-autocommand', 'python3-babel', 'python3-bcrypt', 'python3-bottleneck', 'python3-brotli', 'python3-bs4', 'python3-certifi', 'python3-cffi-backend:amd64', 'python3-chardet', 'python3-click', 'python3-colorama', 'python3-contourpy', 'python3-cpuinfo', 'python3-cryptography', 'python3-cssselect', 'python3-cycler', 'python3-dateutil', 'python3-decorator', 'python3-defusedxml', 'python3-depinfo', 'python3-diskcache', 'python3-dnspython', 'python3-email-validator', 'python3-et-xmlfile', 'python3-fonttools', 'python3-fs', 'python3-h11', 'python3-h2', 'python3-hpack', 'python3-html5lib', 'python3-httpcore', 'python3-httpx', 'python3-hyperframe', 'python3-idna', 'python3-importlib-metadata', 'python3-importlib-resources', 'python3-inflect', 'python3-jaraco.context', 'python3-jaraco.functools', 'python3-jinja2', 'python3-kiwisolver', 'python3-lxml:amd64', 'python3-lz4', 'python3-markdown-it', 'python3-markupsafe', 'python3-matplotlib', 'python3-mdurl', 'python3-minimal', 'python3-more-itertools', 'python3-mpmath', 'python3-numexpr', 'python3-numpy', 'python3-odf', 'python3-olefile', 'python3-openpyxl', 'python3-optlang', 'python3-packaging', 'python3-pandas', 'python3-pandas-lib:amd64', 'python3-pil:amd64', 'python3-pil.imagetk:amd64', 'python3-pkg-resources', 'python3-platformdirs', 'python3-pydantic', 'python3-pydantic-core', 'python3-pygments', 'python3-pyparsing', 'python3-rich', 'python3-ruamel.yaml', 'python3-ruamel.yaml.clib:amd64', 'python3-sbml5', 'python3-scipy', 'python3-six', 'python3-sniffio', 'python3-soupsieve', 'python3-swiglpk', 'python3-sympy', 'python3-tables', 'python3-tables-lib', 'python3-tabulate', 'python3-tk:amd64', 'python3-typeguard', 'python3-typing-extensions', 'python3-tz', 'python3-ufolib2', 'python3-unicodedata2', 'python3-webencodings', 'python3-zipp', 'python3.12', 'python3.12-minimal', 'python3.12-tk', 'python3.13-tk', 'readline-common', 'rpcsvc-proto', 'shared-mime-info', 'tk8.6-blt2.5', 'unicode-data', 'x11-common', 'xdg-user-dirs'] 1m27.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg', '--purge', 'python3-cobra'] 1m27.0s DUMP: dpkg: warning: ignoring request to remove python3-cobra which isn't installed 1m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg', '--purge', 'python3-cobra'] 1m27.0s INFO: Running scripts post_purge 1m27.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_purge_exceptions'] 1m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_purge_exceptions'] 1m27.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg', '--purge', '--pending'] 1m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg', '--purge', '--pending'] 1m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg', '--remove', '--pending'] 1m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg', '--remove', '--pending'] 1m27.1s INFO: Running scripts post_test 1m27.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_test_exceptions'] 1m27.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'tmp/scripts/post_test_exceptions'] 1m27.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 1m27.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 1m28.1s ERROR: WARN: Broken symlinks: /etc/fonts/conf.d/70-no-bitmaps-except-emoji.conf -> /usr/share/fontconfig/conf.avail/70-no-bitmaps-except-emoji.conf 1m28.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg-divert', '--list'] 1m28.2s DUMP: diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64 local diversion of /bin/sync to /bin/sync.distrib.usr-is-merged diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64 local diversion of /home to /home.distrib diversion of /lib64/ld-linux-x86-64.so.2 to /lib64/ld-linux-x86-64.so.2.usr-is-merged by libc6 diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64 diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64 diversion of /libx32 to /.libx32.usr-is-merged by base-files local diversion of /usr/bin/sync to /usr/bin/sync.distrib diversion of /lib32 to /.lib32.usr-is-merged by base-files diversion of /libo32 to /.libo32.usr-is-merged by base-files 1m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'dpkg-divert', '--list'] 1m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', 'clean'] 1m28.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpiltrgohb', 'apt-get', 'clean'] 1m28.2s DEBUG: Recording chroot state 1m28.7s INFO: Warning: Package purging left files on system: /etc/fonts/ owned by: fontconfig-config, fonts-dejavu-core, fonts-dejavu-mono /etc/fonts/conf.d/ owned by: fontconfig-config, fonts-dejavu-core, fonts-dejavu-mono /etc/fonts/conf.d/70-no-bitmaps-except-emoji.conf -> /usr/share/fontconfig/conf.avail/70-no-bitmaps-except-emoji.conf not owned 1m28.7s INFO: PASS: Installation and purging test. 1m29.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/shm'] 1m29.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/shm'] 1m29.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/console'] 1m29.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/console'] 1m29.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/ptmx'] 1m29.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/ptmx'] 1m29.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/pts'] 1m29.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/dev/pts'] 1m29.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/proc'] 1m29.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpiltrgohb/proc'] 1m29.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 1m29.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpiltrgohb'] 1m29.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpiltrgohb 1m29.3s INFO: PASS: All tests. 1m29.3s INFO: piuparts run ends. ret=0 End: 2024-09-25 04:18:11 GMT