Start: 2018-02-27 14:33:27 UTC Package: python-nipype Source: nipype Version: 0.5.3-2wheezy2 Installed-Size: 2245 Maintainer: NeuroDebian Team Architecture: all Provides: python2.6-nipype, python2.7-nipype Depends: python (>= 2.6), python-support (>= 0.90.0), python-scipy, python-simplejson, python-traits (>= 4.0) | python-traits4, python-nibabel (>= 1.0.0~), python-networkx (>= 1.3), python-cfflib Recommends: ipython, python-nose, graphviz Suggests: fsl, afni, python-nipy, slicer, matlab-spm8, python-pyxnat Description: Neuroimaging data analysis pipelines in Python Homepage: http://nipy.sourceforge.net/nipype/ Description-md5: a27048e552e9a1a94c57b117b61b6b2a Section: python Priority: optional Filename: pool/main/n/nipype/python-nipype_0.5.3-2wheezy2_all.deb Size: 501308 MD5sum: f166c4dd168cd51cd8e22cead8c50e84 SHA1: a5a0742780c42b9ed1bfdca839b349eba7b20491 SHA256: 7fd9c23956eb9c19111e6fcf0f41281699e2ec42ff4ae2a4f43361539dbefba7 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy --no-upgrade-test --apt python-nipype=0.5.3-2wheezy2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.84~201801121524~0.83-4-g6e16ed9a starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy --no-upgrade-test --apt python-nipype=0.5.3-2wheezy2 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.9.0-6-amd64 #1 SMP Debian 4.9.82-1+deb9u2 (2018-02-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpQdOwjk 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpQdOwjk 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/proc'] 0m1.5s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/proc'] 0m1.5s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/pts'] 0m1.5s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/pts'] 0m1.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/ptmx'] 0m1.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/ptmx'] 0m1.5s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/console'] 0m1.5s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/console'] 0m1.5s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/run/shm'] 0m1.5s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/run/shm'] 0m1.6s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ wheezy main 0m1.6s DEBUG: Created policy-rc.d and chmodded it. 0m1.6s DEBUG: Created resolv.conf. 0m1.6s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpQdOwjk/tmp/scripts/ 0m1.6s DEBUG: Copying scriptsdir /etc/piuparts/scripts-wheezy to /srv/piuparts.debian.org/tmp/tmpQdOwjk/tmp/scripts/ 0m1.6s INFO: Running scripts post_chroot_unpack 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'update'] 0m3.5s DUMP: Hit http://mirror-ubc.debian.org wheezy Release.gpg Hit http://mirror-ubc.debian.org wheezy Release Hit http://mirror-ubc.debian.org wheezy/main amd64 Packages Hit http://mirror-ubc.debian.org wheezy/main Translation-en Reading package lists... 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'update'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', '-yf', 'dist-upgrade'] 0m3.7s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', '-yf', 'dist-upgrade'] 0m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s DUMP: 0c96df6df725ee7ec7aebd2b6a77fb72 - 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s INFO: Running scripts post_setup 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_dummy_users'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_dummy_users'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_forbid_home'] 0m4.6s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_forbid_home'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.6s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' `/bin/sync' -> `true' 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_minimize'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_minimize'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m5.4s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 335 kB of archives. After this operation, 1327 kB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main adduser all 3.113+nmu3 [264 kB] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main ucf all 3.0025+nmu3 [70.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 335 kB in 0s (3336 kB/s) Selecting previously unselected package adduser. (Reading database ... 6639 files and directories currently installed.) Unpacking adduser (from .../adduser_3.113+nmu3_all.deb) ... Selecting previously unselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ... Moving old data out of the way Setting up adduser (3.113+nmu3) ... Setting up ucf (3.0025+nmu3) ... 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_zz_backports'] 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_setup_zz_backports'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'clean'] 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'clean'] 0m5.4s DEBUG: Recording chroot state 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.1s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u3 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u7 install ok installed gpgv gpgv 1.4.12-7+deb7u7 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u10 install ok installed libc6:amd64 libc6 2.13-38+deb7u10 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed login login 1:4.1.5.1-1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u10 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1 install ok installed perl-base perl-base 5.14.2-21+deb7u3 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1 install ok installed tzdata tzdata 2016d-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-divert', '--list'] 0m6.1s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-divert', '--list'] 0m6.1s INFO: Running scripts is_testable 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/is_testable_uninstallable'] 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/is_testable_uninstallable'] 0m6.1s INFO: apt-cache does not know about any of the requested packages 0m6.1s INFO: Running scripts pre_test 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_test_exceptions'] 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_test_exceptions'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_test_root_password'] 0m6.1s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_test_root_password'] 0m6.1s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m6.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m7.3s DEBUG: No broken symlinks as far as we can find. 0m7.3s INFO: Running scripts pre_install 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_database-server'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_database-server'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_exceptions'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_exceptions'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_extras'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_extras'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-cache', 'show', 'python-nipype=0.5.3-2wheezy2'] 0m8.4s DUMP: Package: python-nipype Source: nipype Version: 0.5.3-2wheezy2 Installed-Size: 2245 Maintainer: NeuroDebian Team Architecture: all Provides: python2.6-nipype, python2.7-nipype Depends: python (>= 2.6), python-support (>= 0.90.0), python-scipy, python-simplejson, python-traits (>= 4.0) | python-traits4, python-nibabel (>= 1.0.0~), python-networkx (>= 1.3), python-cfflib Recommends: ipython, python-nose, graphviz Suggests: fsl, afni, python-nipy, slicer, matlab-spm8, python-pyxnat Description-en: Neuroimaging data analysis pipelines in Python Nipype interfaces Python to other neuroimaging packages and creates an API for specifying a full analysis pipeline in Python. Currently, it has interfaces for SPM, FSL, AFNI, Freesurfer, but could be extended for other packages (such as lipsia). Homepage: http://nipy.sourceforge.net/nipype/ Description-md5: a27048e552e9a1a94c57b117b61b6b2a Section: python Priority: optional Filename: pool/main/n/nipype/python-nipype_0.5.3-2wheezy2_all.deb Size: 501308 MD5sum: f166c4dd168cd51cd8e22cead8c50e84 SHA1: a5a0742780c42b9ed1bfdca839b349eba7b20491 SHA256: 7fd9c23956eb9c19111e6fcf0f41281699e2ec42ff4ae2a4f43361539dbefba7 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-cache', 'show', 'python-nipype=0.5.3-2wheezy2'] 0m8.4s DEBUG: metapackage: Package: piuparts-depends-dummy Version: 0.invalid.0 Architecture: all Maintainer: piuparts developers team Description: Dummy package to satisfy dependencies - created by piuparts This package was created automatically by piuparts and can safely be removed Depends: python (>= 2.6), python-support (>= 0.90.0), python-scipy, python-simplejson, python-traits (>= 4.0) | python-traits4, python-nibabel (>= 1.0.0~), python-networkx (>= 1.3), python-cfflib 0m8.4s DEBUG: Starting command: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpn3I7uL/piuparts-depends-dummy'] 0m8.4s DUMP: dpkg-deb: warning: not checking contents of control area dpkg-deb: building an unknown package in '/srv/piuparts.debian.org/tmp/tmpn3I7uL/piuparts-depends-dummy.deb'. 0m8.4s DEBUG: Command ok: ['dpkg-deb', '-b', '-Zgzip', '--nocheck', '/srv/piuparts.debian.org/tmp/tmpn3I7uL/piuparts-depends-dummy'] 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m8.4s DUMP: 0.9.7.9+deb7u7 0m8.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-query', '-f', '${Version}\n', '-W', 'apt'] 0m8.4s DEBUG: Copying /srv/piuparts.debian.org/tmp/tmpn3I7uL/piuparts-depends-dummy.deb to /srv/piuparts.debian.org/tmp/tmpQdOwjk/tmp 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '-i', './tmp/piuparts-depends-dummy.deb'] 0m8.4s DUMP: Selecting previously unselected package piuparts-depends-dummy. (Reading database ... 6768 files and directories currently installed.) Unpacking piuparts-depends-dummy (from .../tmp/piuparts-depends-dummy.deb) ... dpkg: dependency problems prevent configuration of piuparts-depends-dummy: piuparts-depends-dummy depends on python (>= 2.6); however: Package python is not installed. piuparts-depends-dummy depends on python-support (>= 0.90.0); however: Package python-support is not installed. piuparts-depends-dummy depends on python-scipy; however: Package python-scipy is not installed. piuparts-depends-dummy depends on python-simplejson; however: Package python-simplejson is not installed. piuparts-depends-dummy depends on python-traits (>= 4.0) | python-traits4; however: Package python-traits is not installed. Package python-traits4 is not installed. piuparts-depends-dummy depends on python-nibabel (>= 1.0.0~); however: Package python-nibabel is not installed. piuparts-depends-dummy depends on python-networkx (>= 1.3); however: Package python-networkx is not installed. piuparts-depends-dummy depends on python-cfflib; however: Package python-cfflib is not installed. dpkg: error processing piuparts-depends-dummy (--install): dependency problems - leaving unconfigured Errors were encountered while processing: piuparts-depends-dummy 0m8.4s DEBUG: Command failed (status=1), but ignoring error: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '-i', './tmp/piuparts-depends-dummy.deb'] 0m8.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', '-yf', 'install'] 0m22.2s DUMP: Reading package lists... Building dependency tree... Reading state information... Correcting dependencies... Done The following extra packages will be installed: libamd2.2.0 libblas3 libexpat1 libgcrypt11 libgfortran3 libgpg-error0 liblapack3 libncursesw5 libquadmath0 libsqlite3-0 libssl1.0.0 libumfpack5.4.0 libxml2 libxslt1.1 mime-support python python-cfflib python-lxml python-minimal python-networkx python-nibabel python-numpy python-scipy python-simplejson python-support python-traits python2.7 python2.7-minimal Suggested packages: rng-tools python-doc python-tk python-lxml-dbg python-nibabel-doc python-numpy-doc python-numpy-dbg python-dev gfortran gcc python-profiler python-traitsui python2.7-doc binutils binfmt-support Recommended packages: libgpm2 xml-core file python-nose python-sphinx python-tables python-h5py python-pygraphviz python-pydot python-pkg-resources python-matplotlib python-yaml python-dicom python-fuse g++ c++-compiler python-imaging libjs-jquery The following NEW packages will be installed: libamd2.2.0 libblas3 libexpat1 libgcrypt11 libgfortran3 libgpg-error0 liblapack3 libncursesw5 libquadmath0 libsqlite3-0 libssl1.0.0 libumfpack5.4.0 libxml2 libxslt1.1 mime-support python python-cfflib python-lxml python-minimal python-networkx python-nibabel python-numpy python-scipy python-simplejson python-support python-traits python2.7 python2.7-minimal 0 upgraded, 28 newly installed, 0 to remove and 0 not upgraded. 1 not fully installed or removed. Need to get 34.0 MB of archives. After this operation, 99.0 MB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main libssl1.0.0 amd64 1.0.1e-2+deb7u20 [1263 kB] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main python2.7-minimal amd64 2.7.3-6+deb7u2 [1785 kB] Get:3 http://mirror-ubc.debian.org/debian/ wheezy/main mime-support all 3.52-1+deb7u1 [35.5 kB] Get:4 http://mirror-ubc.debian.org/debian/ wheezy/main libexpat1 amd64 2.1.0-1+deb7u2 [139 kB] Get:5 http://mirror-ubc.debian.org/debian/ wheezy/main libncursesw5 amd64 5.9-10 [141 kB] Get:6 http://mirror-ubc.debian.org/debian/ wheezy/main libsqlite3-0 amd64 3.7.13-1+deb7u2 [454 kB] Get:7 http://mirror-ubc.debian.org/debian/ wheezy/main python2.7 amd64 2.7.3-6+deb7u2 [2728 kB] Get:8 http://mirror-ubc.debian.org/debian/ wheezy/main python-minimal all 2.7.3-4+deb7u1 [42.8 kB] Get:9 http://mirror-ubc.debian.org/debian/ wheezy/main python all 2.7.3-4+deb7u1 [181 kB] Get:10 http://mirror-ubc.debian.org/debian/ wheezy/main python-support all 1.0.15 [33.6 kB] Get:11 http://mirror-ubc.debian.org/debian/ wheezy/main libquadmath0 amd64 4.7.2-5 [125 kB] Get:12 http://mirror-ubc.debian.org/debian/ wheezy/main libgfortran3 amd64 4.7.2-5 [351 kB] Get:13 http://mirror-ubc.debian.org/debian/ wheezy/main libblas3 amd64 1.2.20110419-5 [293 kB] Get:14 http://mirror-ubc.debian.org/debian/ wheezy/main liblapack3 amd64 3.4.1+dfsg-1+deb70u1 [5036 kB] Get:15 http://mirror-ubc.debian.org/debian/ wheezy/main python-numpy amd64 1:1.6.2-1.2 [2632 kB] Get:16 http://mirror-ubc.debian.org/debian/ wheezy/main libamd2.2.0 amd64 1:3.4.0-3 [29.2 kB] Get:17 http://mirror-ubc.debian.org/debian/ wheezy/main libumfpack5.4.0 amd64 1:3.4.0-3 [360 kB] Get:18 http://mirror-ubc.debian.org/debian/ wheezy/main python-scipy amd64 0.10.1+dfsg2-1 [12.4 MB] Get:19 http://mirror-ubc.debian.org/debian/ wheezy/main python-simplejson amd64 2.5.2-1 [97.6 kB] Get:20 http://mirror-ubc.debian.org/debian/ wheezy/main python-traits amd64 4.1.0-1 [401 kB] Get:21 http://mirror-ubc.debian.org/debian/ wheezy/main python-nibabel all 1.2.2-1 [1822 kB] Get:22 http://mirror-ubc.debian.org/debian/ wheezy/main python-networkx all 1.7~rc1-3 [743 kB] Get:23 http://mirror-ubc.debian.org/debian/ wheezy/main libxml2 amd64 2.8.0+dfsg1-7+wheezy5 [906 kB] Get:24 http://mirror-ubc.debian.org/debian/ wheezy/main libgpg-error0 amd64 1.10-3.1 [77.9 kB] Get:25 http://mirror-ubc.debian.org/debian/ wheezy/main libgcrypt11 amd64 1.5.0-5+deb7u4 [301 kB] Get:26 http://mirror-ubc.debian.org/debian/ wheezy/main libxslt1.1 amd64 1.1.26-14.1 [254 kB] Get:27 http://mirror-ubc.debian.org/debian/ wheezy/main python-lxml amd64 2.3.2-1+deb7u1 [1238 kB] Get:28 http://mirror-ubc.debian.org/debian/ wheezy/main python-cfflib all 2.0.5-1 [217 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 34.0 MB in 5s (6337 kB/s) Selecting previously unselected package libssl1.0.0:amd64. (Reading database ... 6768 files and directories currently installed.) Unpacking libssl1.0.0:amd64 (from .../libssl1.0.0_1.0.1e-2+deb7u20_amd64.deb) ... Selecting previously unselected package python2.7-minimal. Unpacking python2.7-minimal (from .../python2.7-minimal_2.7.3-6+deb7u2_amd64.deb) ... Selecting previously unselected package mime-support. Unpacking mime-support (from .../mime-support_3.52-1+deb7u1_all.deb) ... Selecting previously unselected package libexpat1:amd64. Unpacking libexpat1:amd64 (from .../libexpat1_2.1.0-1+deb7u2_amd64.deb) ... Selecting previously unselected package libncursesw5:amd64. Unpacking libncursesw5:amd64 (from .../libncursesw5_5.9-10_amd64.deb) ... Selecting previously unselected package libsqlite3-0:amd64. Unpacking libsqlite3-0:amd64 (from .../libsqlite3-0_3.7.13-1+deb7u2_amd64.deb) ... Selecting previously unselected package python2.7. Unpacking python2.7 (from .../python2.7_2.7.3-6+deb7u2_amd64.deb) ... Selecting previously unselected package python-minimal. Unpacking python-minimal (from .../python-minimal_2.7.3-4+deb7u1_all.deb) ... Selecting previously unselected package python. Unpacking python (from .../python_2.7.3-4+deb7u1_all.deb) ... Selecting previously unselected package python-support. Unpacking python-support (from .../python-support_1.0.15_all.deb) ... Selecting previously unselected package libquadmath0:amd64. Unpacking libquadmath0:amd64 (from .../libquadmath0_4.7.2-5_amd64.deb) ... Selecting previously unselected package libgfortran3:amd64. Unpacking libgfortran3:amd64 (from .../libgfortran3_4.7.2-5_amd64.deb) ... Selecting previously unselected package libblas3. Unpacking libblas3 (from .../libblas3_1.2.20110419-5_amd64.deb) ... Selecting previously unselected package liblapack3. Unpacking liblapack3 (from .../liblapack3_3.4.1+dfsg-1+deb70u1_amd64.deb) ... Selecting previously unselected package python-numpy. Unpacking python-numpy (from .../python-numpy_1%3a1.6.2-1.2_amd64.deb) ... Selecting previously unselected package libamd2.2.0. Unpacking libamd2.2.0 (from .../libamd2.2.0_1%3a3.4.0-3_amd64.deb) ... Selecting previously unselected package libumfpack5.4.0. Unpacking libumfpack5.4.0 (from .../libumfpack5.4.0_1%3a3.4.0-3_amd64.deb) ... Selecting previously unselected package python-scipy. Unpacking python-scipy (from .../python-scipy_0.10.1+dfsg2-1_amd64.deb) ... Selecting previously unselected package python-simplejson. Unpacking python-simplejson (from .../python-simplejson_2.5.2-1_amd64.deb) ... Selecting previously unselected package python-traits. Unpacking python-traits (from .../python-traits_4.1.0-1_amd64.deb) ... Selecting previously unselected package python-nibabel. Unpacking python-nibabel (from .../python-nibabel_1.2.2-1_all.deb) ... Selecting previously unselected package python-networkx. Unpacking python-networkx (from .../python-networkx_1.7~rc1-3_all.deb) ... Selecting previously unselected package libxml2:amd64. Unpacking libxml2:amd64 (from .../libxml2_2.8.0+dfsg1-7+wheezy5_amd64.deb) ... Selecting previously unselected package libgpg-error0:amd64. Unpacking libgpg-error0:amd64 (from .../libgpg-error0_1.10-3.1_amd64.deb) ... Selecting previously unselected package libgcrypt11:amd64. Unpacking libgcrypt11:amd64 (from .../libgcrypt11_1.5.0-5+deb7u4_amd64.deb) ... Selecting previously unselected package libxslt1.1:amd64. Unpacking libxslt1.1:amd64 (from .../libxslt1.1_1.1.26-14.1_amd64.deb) ... Selecting previously unselected package python-lxml. Unpacking python-lxml (from .../python-lxml_2.3.2-1+deb7u1_amd64.deb) ... Selecting previously unselected package python-cfflib. Unpacking python-cfflib (from .../python-cfflib_2.0.5-1_all.deb) ... Setting up libssl1.0.0:amd64 (1.0.1e-2+deb7u20) ... Setting up python2.7-minimal (2.7.3-6+deb7u2) ... Setting up mime-support (3.52-1+deb7u1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up libexpat1:amd64 (2.1.0-1+deb7u2) ... Setting up libncursesw5:amd64 (5.9-10) ... Setting up libsqlite3-0:amd64 (3.7.13-1+deb7u2) ... Setting up python2.7 (2.7.3-6+deb7u2) ... Setting up python-minimal (2.7.3-4+deb7u1) ... Setting up python (2.7.3-4+deb7u1) ... Setting up python-support (1.0.15) ... Setting up libquadmath0:amd64 (4.7.2-5) ... Setting up libgfortran3:amd64 (4.7.2-5) ... Setting up libblas3 (1.2.20110419-5) ... update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode Setting up liblapack3 (3.4.1+dfsg-1+deb70u1) ... update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode Setting up python-numpy (1:1.6.2-1.2) ... Setting up libamd2.2.0 (1:3.4.0-3) ... Setting up libumfpack5.4.0 (1:3.4.0-3) ... Setting up python-scipy (0.10.1+dfsg2-1) ... Setting up python-simplejson (2.5.2-1) ... Setting up python-traits (4.1.0-1) ... Setting up python-nibabel (1.2.2-1) ... Setting up python-networkx (1.7~rc1-3) ... Setting up libxml2:amd64 (2.8.0+dfsg1-7+wheezy5) ... Setting up libgpg-error0:amd64 (1.10-3.1) ... Setting up libgcrypt11:amd64 (1.5.0-5+deb7u4) ... Setting up libxslt1.1:amd64 (1.1.26-14.1) ... Setting up python-lxml (2.3.2-1+deb7u1) ... Setting up python-cfflib (2.0.5-1) ... Setting up piuparts-depends-dummy (0.invalid.0) ... Processing triggers for python-support ... 0m22.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', '-yf', 'install'] 0m22.2s INFO: Installation of ['./tmp/piuparts-depends-dummy.deb'] ok 0m22.2s DEBUG: Removing /srv/piuparts.debian.org/tmp/tmpQdOwjk/./tmp/piuparts-depends-dummy.deb 0m22.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m22.2s DUMP: piuparts-depends-dummy install ok installed 0m22.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-query', '-f', '${Package} ${Status}\n', '-W', 'piuparts-depends-dummy'] 0m22.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m22.3s DUMP: (Reading database ... 12700 files and directories currently installed.) Removing piuparts-depends-dummy ... 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--purge', 'piuparts-depends-dummy'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'clean'] 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'clean'] 0m22.3s DEBUG: Recording chroot state 0m23.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m23.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m25.4s ERROR: WARN: Broken symlinks: /usr/share/doc/python-simplejson/_static/underscore.js -> ../../../javascript/sphinxdoc/1.0/underscore.js /usr/share/doc/python-simplejson/_static/doctools.js -> ../../../javascript/sphinxdoc/1.0/doctools.js /usr/share/doc/python-simplejson/_static/sidebar.js -> ../../../javascript/sphinxdoc/1.0/sidebar.js /usr/share/doc/python-simplejson/_static/jquery.js -> ../../../javascript/sphinxdoc/1.0/jquery.js /usr/share/doc/python-simplejson/_static/searchtools.js -> ../../../javascript/sphinxdoc/1.0/searchtools.js /usr/include/python2.6_d/numpy -> ../../lib/pymodules/python2.6/numpy/core/include/numpy /usr/include/python2.6/numpy -> ../../lib/pymodules/python2.6/numpy/core/include/numpy 0m25.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-cache', 'policy'] 0m26.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-cache', 'policy'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-cache', 'policy', 'python-nipype'] 0m26.4s DUMP: python-nipype: Installed: (none) Candidate: 0.5.3-2wheezy2 Version table: 0.5.3-2wheezy2 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 0m26.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-cache', 'policy', 'python-nipype'] 0m26.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', '-y', 'install', 'python-nipype=0.5.3-2wheezy2'] 0m27.6s DUMP: Reading package lists... Building dependency tree... Reading state information... Suggested packages: fsl afni python-nipy slicer matlab-spm8 python-pyxnat Recommended packages: ipython python-nose graphviz The following NEW packages will be installed: python-nipype 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 501 kB of archives. After this operation, 2299 kB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main python-nipype all 0.5.3-2wheezy2 [501 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 501 kB in 0s (8950 kB/s) Selecting previously unselected package python-nipype. (Reading database ... 12700 files and directories currently installed.) Unpacking python-nipype (from .../python-nipype_0.5.3-2wheezy2_all.deb) ... Setting up python-nipype (0.5.3-2wheezy2) ... Processing triggers for python-support ... 0m27.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', '-y', 'install', 'python-nipype=0.5.3-2wheezy2'] 0m27.6s INFO: Running scripts post_install 0m27.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_install_exceptions'] 0m27.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_install_exceptions'] 0m27.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m28.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m30.3s ERROR: WARN: Broken symlinks: /usr/share/doc/python-simplejson/_static/underscore.js -> ../../../javascript/sphinxdoc/1.0/underscore.js /usr/share/doc/python-simplejson/_static/doctools.js -> ../../../javascript/sphinxdoc/1.0/doctools.js /usr/share/doc/python-simplejson/_static/sidebar.js -> ../../../javascript/sphinxdoc/1.0/sidebar.js /usr/share/doc/python-simplejson/_static/jquery.js -> ../../../javascript/sphinxdoc/1.0/jquery.js /usr/share/doc/python-simplejson/_static/searchtools.js -> ../../../javascript/sphinxdoc/1.0/searchtools.js /usr/include/python2.6_d/numpy -> ../../lib/pymodules/python2.6/numpy/core/include/numpy /usr/include/python2.6/numpy -> ../../lib/pymodules/python2.6/numpy/core/include/numpy 0m30.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m30.3s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u3 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u7 install ok installed gpgv gpgv 1.4.12-7+deb7u7 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libamd2.2.0 libamd2.2.0 1:3.4.0-3 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblas3 libblas3 1.2.20110419-5 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u10 install ok installed libc6:amd64 libc6 2.13-38+deb7u10 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5 install ok installed libexpat1:amd64 libexpat1 2.1.0-1+deb7u2 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed libgcrypt11:amd64 libgcrypt11 1.5.0-5+deb7u4 install ok installed libgfortran3:amd64 libgfortran3 4.7.2-5 install ok installed libgpg-error0:amd64 libgpg-error0 1.10-3.1 install ok installed liblapack3 liblapack3 3.4.1+dfsg-1+deb70u1 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libncursesw5:amd64 libncursesw5 5.9-10 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libquadmath0:amd64 libquadmath0 4.7.2-5 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.7.13-1+deb7u2 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libssl1.0.0:amd64 libssl1.0.0 1.0.1e-2+deb7u20 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libumfpack5.4.0 libumfpack5.4.0 1:3.4.0-3 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed libxml2:amd64 libxml2 2.8.0+dfsg1-7+wheezy5 install ok installed libxslt1.1:amd64 libxslt1.1 1.1.26-14.1 install ok installed login login 1:4.1.5.1-1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mime-support mime-support 3.52-1+deb7u1 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u10 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1 install ok installed perl-base perl-base 5.14.2-21+deb7u3 install ok installed python python 2.7.3-4+deb7u1 install ok installed python-cfflib python-cfflib 2.0.5-1 install ok installed python-lxml python-lxml 2.3.2-1+deb7u1 install ok installed python-minimal python-minimal 2.7.3-4+deb7u1 install ok installed python-networkx python-networkx 1.7~rc1-3 install ok installed python-nibabel python-nibabel 1.2.2-1 install ok installed python-nipype python-nipype 0.5.3-2wheezy2 install ok installed python-numpy python-numpy 1:1.6.2-1.2 install ok installed python-scipy python-scipy 0.10.1+dfsg2-1 install ok installed python-simplejson python-simplejson 2.5.2-1 install ok installed python-support python-support 1.0.15 install ok installed python-traits python-traits 4.1.0-1 install ok installed python2.7 python2.7 2.7.3-6+deb7u2 install ok installed python2.7-minimal python2.7-minimal 2.7.3-6+deb7u2 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1 install ok installed tzdata tzdata 2016d-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m30.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m31.0s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', '-ac', '--ignore-obsolete'] 0m31.8s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', '-ac', '--ignore-obsolete'] 0m31.8s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m31.8s DUMP: 0.15.1 0m31.8s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m31.8s INFO: Running adequate version 0.15.1 now. 0m31.8s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'python-nipype'] 0m31.9s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'python-nipype'] 0m31.9s INFO: Running scripts pre_remove 0m31.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m32.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m32.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m33.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m33.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m33.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m33.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m33.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m33.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_exceptions'] 0m33.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/pre_remove_exceptions'] 0m33.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'remove', 'libumfpack5.4.0', 'libamd2.2.0', 'libgcrypt11:amd64', 'python-scipy', 'python-support', 'python-lxml', 'libgfortran3:amd64', 'libsqlite3-0:amd64', 'liblapack3', 'python-nibabel', 'libssl1.0.0:amd64', 'python-cfflib', 'libquadmath0:amd64', 'libexpat1:amd64', 'python-traits', 'libxslt1.1:amd64', 'python', 'python-numpy', 'libgpg-error0:amd64', 'python2.7', 'python-simplejson', 'python2.7-minimal', 'mime-support', 'libxml2:amd64', 'python-minimal', 'libblas3', 'libncursesw5:amd64', 'python-networkx', 'python-nipype'] 0m34.4s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: libamd2.2.0 libblas3 libexpat1 libgcrypt11 libgfortran3 libgpg-error0 liblapack3 libncursesw5 libquadmath0 libsqlite3-0 libssl1.0.0 libumfpack5.4.0 libxml2 libxslt1.1 mime-support python python-cfflib python-lxml python-minimal python-networkx python-nibabel python-nipype python-numpy python-scipy python-simplejson python-support python-traits python2.7 python2.7-minimal 0 upgraded, 0 newly installed, 29 to remove and 0 not upgraded. After this operation, 101 MB disk space will be freed. (Reading database ... 13129 files and directories currently installed.) Removing python-nipype ... Removing python-cfflib ... Removing python-nibabel ... Removing python-scipy ... Removing libumfpack5.4.0 ... Removing libamd2.2.0 ... Removing python-numpy ... Removing liblapack3 ... Removing libblas3 ... Removing python-simplejson ... Removing python-traits ... Removing python-networkx ... Removing python-support ... Removing python-lxml ... Removing python ... Removing python2.7 ... Removing libexpat1:amd64 ... Removing libxslt1.1:amd64 ... Removing libgcrypt11:amd64 ... Removing libgfortran3:amd64 ... Removing libgpg-error0:amd64 ... Removing libncursesw5:amd64 ... Removing libquadmath0:amd64 ... Removing libsqlite3-0:amd64 ... Removing python-minimal ... Removing python2.7-minimal ... Removing libssl1.0.0:amd64 ... Removing libxml2:amd64 ... Removing mime-support ... 0m34.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'remove', 'libumfpack5.4.0', 'libamd2.2.0', 'libgcrypt11:amd64', 'python-scipy', 'python-support', 'python-lxml', 'libgfortran3:amd64', 'libsqlite3-0:amd64', 'liblapack3', 'python-nibabel', 'libssl1.0.0:amd64', 'python-cfflib', 'libquadmath0:amd64', 'libexpat1:amd64', 'python-traits', 'libxslt1.1:amd64', 'python', 'python-numpy', 'libgpg-error0:amd64', 'python2.7', 'python-simplejson', 'python2.7-minimal', 'mime-support', 'libxml2:amd64', 'python-minimal', 'libblas3', 'libncursesw5:amd64', 'python-networkx', 'python-nipype'] 0m34.4s INFO: Running scripts post_remove 0m34.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_remove_exceptions'] 0m34.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_remove_exceptions'] 0m34.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--purge', 'libumfpack5.4.0', 'libamd2.2.0', 'libgcrypt11:amd64', 'python-scipy', 'python-support', 'python-lxml', 'libgfortran3:amd64', 'libsqlite3-0:amd64', 'liblapack3', 'python-nibabel', 'libssl1.0.0:amd64', 'python-cfflib', 'libquadmath0:amd64', 'libexpat1:amd64', 'python-traits', 'libxslt1.1:amd64', 'python', 'python-numpy', 'libgpg-error0:amd64', 'python2.7', 'python-simplejson', 'python2.7-minimal', 'mime-support', 'libxml2:amd64', 'python-minimal', 'libblas3', 'libncursesw5:amd64', 'python-networkx'] 0m34.7s DUMP: (Reading database ... 6773 files and directories currently installed.) Removing libumfpack5.4.0 ... Purging configuration files for libumfpack5.4.0 ... Removing libamd2.2.0 ... Purging configuration files for libamd2.2.0 ... Removing libgcrypt11:amd64 ... Purging configuration files for libgcrypt11:amd64 ... dpkg: warning: ignoring request to remove python-scipy which isn't installed Removing python-support ... Purging configuration files for python-support ... dpkg: warning: ignoring request to remove python-lxml which isn't installed Removing libgfortran3:amd64 ... Purging configuration files for libgfortran3:amd64 ... Removing libsqlite3-0:amd64 ... Purging configuration files for libsqlite3-0:amd64 ... Removing liblapack3 ... Purging configuration files for liblapack3 ... dpkg: warning: ignoring request to remove python-nibabel which isn't installed Removing libssl1.0.0:amd64 ... Purging configuration files for libssl1.0.0:amd64 ... dpkg: warning: ignoring request to remove python-cfflib which isn't installed Removing libquadmath0:amd64 ... Purging configuration files for libquadmath0:amd64 ... Removing libexpat1:amd64 ... Purging configuration files for libexpat1:amd64 ... dpkg: warning: ignoring request to remove python-traits which isn't installed Removing libxslt1.1:amd64 ... Purging configuration files for libxslt1.1:amd64 ... Removing python ... Purging configuration files for python ... dpkg: warning: ignoring request to remove python-numpy which isn't installed Removing libgpg-error0:amd64 ... Purging configuration files for libgpg-error0:amd64 ... Removing python2.7 ... Purging configuration files for python2.7 ... dpkg: warning: ignoring request to remove python-simplejson which isn't installed Removing python2.7-minimal ... Purging configuration files for python2.7-minimal ... Removing mime-support ... Purging configuration files for mime-support ... Removing libxml2:amd64 ... Purging configuration files for libxml2:amd64 ... dpkg: warning: ignoring request to remove python-minimal which isn't installed dpkg: warning: ignoring request to remove libblas3 which isn't installed Removing libncursesw5:amd64 ... Purging configuration files for libncursesw5:amd64 ... dpkg: warning: ignoring request to remove python-networkx which isn't installed 0m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--purge', 'libumfpack5.4.0', 'libamd2.2.0', 'libgcrypt11:amd64', 'python-scipy', 'python-support', 'python-lxml', 'libgfortran3:amd64', 'libsqlite3-0:amd64', 'liblapack3', 'python-nibabel', 'libssl1.0.0:amd64', 'python-cfflib', 'libquadmath0:amd64', 'libexpat1:amd64', 'python-traits', 'libxslt1.1:amd64', 'python', 'python-numpy', 'libgpg-error0:amd64', 'python2.7', 'python-simplejson', 'python2.7-minimal', 'mime-support', 'libxml2:amd64', 'python-minimal', 'libblas3', 'libncursesw5:amd64', 'python-networkx'] 0m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--purge', 'python-nipype'] 0m34.7s DUMP: dpkg: warning: ignoring request to remove python-nipype which isn't installed 0m34.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--purge', 'python-nipype'] 0m34.7s INFO: Running scripts post_purge 0m34.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_purge_exceptions'] 0m34.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_purge_exceptions'] 0m34.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--purge', '--pending'] 0m34.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--purge', '--pending'] 0m34.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--remove', '--pending'] 0m34.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg', '--remove', '--pending'] 0m34.8s INFO: Running scripts post_test 0m34.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_test_exceptions'] 0m34.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'tmp/scripts/post_test_exceptions'] 0m34.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m35.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m35.7s DEBUG: No broken symlinks as far as we can find. 0m35.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-divert', '--list'] 0m35.7s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m35.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'dpkg-divert', '--list'] 0m35.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'clean'] 0m35.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpQdOwjk', 'apt-get', 'clean'] 0m35.7s DEBUG: Recording chroot state 0m36.6s INFO: PASS: Installation and purging test. 0m37.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/run/shm'] 0m37.1s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/run/shm'] 0m37.1s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/console'] 0m37.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/console'] 0m37.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/ptmx'] 0m37.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/ptmx'] 0m37.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/pts'] 0m37.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/dev/pts'] 0m37.2s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/proc'] 0m37.2s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpQdOwjk/proc'] 0m37.2s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m37.3s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpQdOwjk'] 0m37.3s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpQdOwjk 0m37.3s INFO: PASS: All tests. 0m37.3s INFO: piuparts run ends. ret=0 End: 2018-02-27 14:34:05 UTC