Start: 2023-03-22 19:02:01 GMT [wheezy] Package: gromacs-data Source: gromacs Version: 4.5.5-2 Installed-Size: 8157 Maintainer: Debichem Team Architecture: all Replaces: gromacs-doc Recommends: gromacs Suggests: tcsh | c-shell Conflicts: gromacs-doc Breaks: gromacs (<< 3.3.3-1) Description: GROMACS molecular dynamics sim, data and documentation Homepage: http://www.gromacs.org/ Description-md5: 03ddef80c5d959a0289c77ec8b295eee Tag: field::biology, field::chemistry, role::app-data, role::documentation Section: science Priority: extra Filename: pool/main/g/gromacs/gromacs-data_4.5.5-2_all.deb Size: 1853126 MD5sum: c18d72bff19d1ff9ffccc6fd64157270 SHA1: 8dfcb0b6c94547cef0fb0df541329553b5c4a404 SHA256: 335ad807a19e21c32594f63c385c217d63ab9c10e216353930f61824c4231900 [jessie-lts] Package: gromacs-data Source: gromacs Version: 5.0.2-1 Installed-Size: 7635 Maintainer: Debichem Team Architecture: all Replaces: gromacs-doc Recommends: gromacs Suggests: tcsh | c-shell Conflicts: gromacs-doc Breaks: gromacs (<< 3.3.3-1) Description: GROMACS molecular dynamics sim, data and documentation Homepage: http://www.gromacs.org/ Description-md5: 03ddef80c5d959a0289c77ec8b295eee Tag: field::biology, field::chemistry, role::app-data, role::documentation Section: science Priority: extra Filename: pool/main/g/gromacs/gromacs-data_5.0.2-1_all.deb Size: 784982 MD5sum: 9bf6101ab3ac8ce972455d738d06098d SHA1: dc274ab62dacf8dccfcfded772a0fb901d60f505 SHA256: 376e1fba1dabf6ac30279a9fe9ee2102f65c568ca81437da640d4c361f749f42 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie-lts -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie-lts/reference-chroot-metadata.dat --apt gromacs-data=5.0.2-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie-lts -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie-lts/reference-chroot-metadata.dat --apt gromacs-data=5.0.2-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpir4ytuns 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpir4ytuns 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpir4ytuns', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpir4ytuns', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/proc'] 0m1.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/proc'] 0m1.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/pts'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/pts'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/ptmx'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/ptmx'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/console'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/console'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/run/shm'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/run/shm'] 0m1.4s DEBUG: sources.list: deb http://archive.debian.org/debian wheezy main 0m1.4s DEBUG: Created policy-rc.d and chmodded it. 0m1.4s DEBUG: Created resolv.conf. 0m1.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpir4ytuns/tmp/scripts/ 0m1.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts-jessie to /srv/piuparts.debian.org/tmp/tmpir4ytuns/tmp/scripts/ 0m1.4s INFO: Running scripts post_chroot_unpack 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpir4ytuns', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DUMP: Creating /etc/apt/apt.conf.d/unauthenticated-wheezy ... # The Release file is not getting updated. Acquire::Check-Valid-Until "false"; 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpir4ytuns', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpir4ytuns', 'apt-get', 'update'] 0m1.5s DUMP: E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m1.5s ERROR: Command failed (status=100): ['chroot', '/srv/piuparts.debian.org/tmp/tmpir4ytuns', 'apt-get', 'update'] E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/run/shm'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/run/shm'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/console'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/console'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/ptmx'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/ptmx'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/pts'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/dev/pts'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/proc'] 0m1.9s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpir4ytuns/proc'] 0m1.9s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpir4ytuns'] 0m1.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpir4ytuns'] 0m1.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpir4ytuns 0m1.9s ERROR: piuparts run ends. ret=1 End: 2023-03-22 19:02:03 GMT