Start: 2019-02-04 00:58:59 UTC [wheezy] Package: xmds Version: 1.6.6-7 Installed-Size: 2487 Maintainer: Debian Science Team Architecture: amd64 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.6), fftw-dev, libfftw3-dev, mpi-default-dev Suggests: octave Description: eXtensible Multi-Dimensional Simulator Homepage: http://xmds.sourceforge.net/ Description-md5: c704afd7e308c3a31863389f98d203a0 Tag: implemented-in::c++, role::program Section: science Priority: extra Filename: pool/main/x/xmds/xmds_1.6.6-7_amd64.deb Size: 732506 MD5sum: f9f5f1950d512cca5274a661325a8161 SHA1: 10411b7fed24bce826baa2e408768ad8806bf4d7 SHA256: 739f73bb812fac8e3774f90c6e7ac6a4daed18a89f094bb5bc20744cf33d2785 [jessie-lts] Package: xmds Version: 1.6.6-7 Installed-Size: 2487 Maintainer: Debian Science Team Architecture: amd64 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.6), fftw-dev, libfftw3-dev, mpi-default-dev Suggests: octave Description: eXtensible Multi-Dimensional Simulator Homepage: http://xmds.sourceforge.net/ Description-md5: c704afd7e308c3a31863389f98d203a0 Tag: implemented-in::c++, role::program Section: science Priority: extra Filename: pool/main/x/xmds/xmds_1.6.6-7_amd64.deb Size: 732506 MD5sum: f9f5f1950d512cca5274a661325a8161 SHA1: 10411b7fed24bce826baa2e408768ad8806bf4d7 SHA256: 739f73bb812fac8e3774f90c6e7ac6a4daed18a89f094bb5bc20744cf33d2785 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie-lts -B reference-chroot-metadata.dat --apt xmds=1.6.6-7 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.97~201901311528~0.96-4-g2f67d80c starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie-lts -B reference-chroot-metadata.dat --apt xmds=1.6.6-7 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.9.0-8-amd64 #1 SMP Debian 4.9.130-2 (2018-10-27) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmphl1p9s 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmphl1p9s 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmphl1p9s', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m2.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmphl1p9s', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m2.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmphl1p9s/proc'] 0m2.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmphl1p9s/proc'] 0m2.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/pts'] 0m2.3s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/pts'] 0m2.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/ptmx'] 0m2.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/ptmx'] 0m2.3s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/console'] 0m2.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/console'] 0m2.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmphl1p9s/run/shm'] 0m2.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmphl1p9s/run/shm'] 0m2.4s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ wheezy main 0m2.4s DEBUG: Created policy-rc.d and chmodded it. 0m2.4s DEBUG: Created resolv.conf. 0m2.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmphl1p9s/tmp/scripts/ 0m2.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts-jessie to /srv/piuparts.debian.org/tmp/tmphl1p9s/tmp/scripts/ 0m2.4s INFO: Running scripts post_chroot_unpack 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', 'update'] 0m4.6s DUMP: Hit http://mirror-ubc.debian.org wheezy Release.gpg Hit http://mirror-ubc.debian.org wheezy Release Hit http://mirror-ubc.debian.org wheezy/main amd64 Packages Hit http://mirror-ubc.debian.org wheezy/main Translation-en Reading package lists... 0m4.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', 'update'] 0m4.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-yf', 'dist-upgrade'] 0m4.9s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m4.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-yf', 'dist-upgrade'] 0m4.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.1s DUMP: 0c96df6df725ee7ec7aebd2b6a77fb72 - 0m5.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m5.1s INFO: Running scripts post_setup 0m5.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_dummy_users'] 0m6.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_dummy_users'] 0m6.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_forbid_home'] 0m6.2s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_forbid_home'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.2s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' `/bin/sync' -> `true' 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_force-unsafe-io'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_jessie-fake-essential'] 0m6.9s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... The following NEW packages will be installed: ucf 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 70.8 kB of archives. After this operation, 236 kB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main ucf all 3.0025+nmu3 [70.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 70.8 kB in 0s (0 B/s) Selecting previously unselected package ucf. (Reading database ... 6639 files and directories currently installed.) Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ... Moving old data out of the way Setting up ucf (3.0025+nmu3) ... 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_jessie-fake-essential'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_minimize'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_minimize'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_squeeze-backports'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_zz_backports'] 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_setup_zz_backports'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.9s DUMP: install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u3 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u7 install ok installed gpgv gpgv 1.4.12-7+deb7u7 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u10 install ok installed libc6:amd64 libc6 2.13-38+deb7u10 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed login login 1:4.1.5.1-1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u10 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1 install ok installed perl-base perl-base 5.14.2-21+deb7u3 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1 install ok installed tzdata tzdata 2016d-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.9s DEBUG: Loading chroot meta data from reference-chroot-metadata.dat 0m7.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m8.0s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m8.0s INFO: Running scripts is_testable 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/is_testable_uninstallable'] 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/is_testable_uninstallable'] 0m8.0s INFO: Running scripts pre_test 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_test_exceptions'] 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_test_exceptions'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_test_root_password'] 0m8.0s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_test_root_password'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'show', '--no-all-versions', 'xmds'] 0m8.0s DUMP: Package: xmds Version: 1.6.6-7 Installed-Size: 2487 Maintainer: Debian Science Team Architecture: amd64 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.6), fftw-dev, libfftw3-dev, mpi-default-dev Suggests: octave Description-en: eXtensible Multi-Dimensional Simulator XMDS is a code generator that integrates equations, from Ordinary Differential Equations (ODEs) up to stochastic Partial Differential Equations (PDEs). You write them down in human readable form in an XML file, and it goes away and writes and compiles a C++ program that integrates those equations as fast as it can possibly be done in your architecture. Homepage: http://xmds.sourceforge.net/ Description-md5: c704afd7e308c3a31863389f98d203a0 Tag: implemented-in::c++, role::program Section: science Priority: extra Filename: pool/main/x/xmds/xmds_1.6.6-7_amd64.deb Size: 732506 MD5sum: f9f5f1950d512cca5274a661325a8161 SHA1: 10411b7fed24bce826baa2e408768ad8806bf4d7 SHA256: 739f73bb812fac8e3774f90c6e7ac6a4daed18a89f094bb5bc20744cf33d2785 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'show', '--no-all-versions', 'xmds'] 0m8.0s INFO: apt-cache knows about the following packages: xmds 0m8.0s INFO: Running scripts pre_install 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_database-server'] 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_database-server'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_exceptions'] 0m8.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_exceptions'] 0m8.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_extras'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_extras'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy'] 0m8.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy', 'xmds'] 0m8.1s DUMP: xmds: Installed: (none) Candidate: 1.6.6-7 Version table: 1.6.6-7 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 0m8.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy', 'xmds'] 0m8.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-y', 'install', 'xmds'] 0m10.8s DUMP: Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: adduser fftw-dev fftw2 libfftw3-3 libfftw3-bin libfftw3-dev libgfortran3 libgomp1 libibverbs-dev libibverbs1 libnuma1 libopenmpi-dev libopenmpi1.3 libquadmath0 libtorque2 mpi-default-dev openmpi-common Suggested packages: perl-modules mpi-defaults-bin octave The following NEW packages will be installed: adduser fftw-dev fftw2 libfftw3-3 libfftw3-bin libfftw3-dev libgfortran3 libgomp1 libibverbs-dev libibverbs1 libnuma1 libopenmpi-dev libopenmpi1.3 libquadmath0 libtorque2 mpi-default-dev openmpi-common xmds 0 upgraded, 18 newly installed, 0 to remove and 0 not upgraded. Need to get 10.3 MB of archives. After this operation, 42.0 MB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main libgomp1 amd64 4.7.2-5 [27.5 kB] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main libfftw3-3 amd64 3.3.2-3.1 [1665 kB] Get:3 http://mirror-ubc.debian.org/debian/ wheezy/main libquadmath0 amd64 4.7.2-5 [125 kB] Get:4 http://mirror-ubc.debian.org/debian/ wheezy/main libgfortran3 amd64 4.7.2-5 [351 kB] Get:5 http://mirror-ubc.debian.org/debian/ wheezy/main adduser all 3.113+nmu3 [264 kB] Get:6 http://mirror-ubc.debian.org/debian/ wheezy/main libfftw3-bin amd64 3.3.2-3.1 [202 kB] Get:7 http://mirror-ubc.debian.org/debian/ wheezy/main libfftw3-dev amd64 3.3.2-3.1 [1767 kB] Get:8 http://mirror-ubc.debian.org/debian/ wheezy/main libnuma1 amd64 2.0.8~rc4-1 [33.7 kB] Get:9 http://mirror-ubc.debian.org/debian/ wheezy/main libtorque2 amd64 2.4.16+dfsg-1+deb7u4 [121 kB] Get:10 http://mirror-ubc.debian.org/debian/ wheezy/main libibverbs1 amd64 1.1.6-1 [35.3 kB] Get:11 http://mirror-ubc.debian.org/debian/ wheezy/main libopenmpi1.3 amd64 1.4.5-1 [1436 kB] Get:12 http://mirror-ubc.debian.org/debian/ wheezy/main fftw2 amd64 2.1.5-1 [283 kB] Get:13 http://mirror-ubc.debian.org/debian/ wheezy/main fftw-dev amd64 2.1.5-1 [325 kB] Get:14 http://mirror-ubc.debian.org/debian/ wheezy/main libibverbs-dev amd64 1.1.6-1 [84.8 kB] Get:15 http://mirror-ubc.debian.org/debian/ wheezy/main openmpi-common all 1.4.5-1 [101 kB] Get:16 http://mirror-ubc.debian.org/debian/ wheezy/main libopenmpi-dev amd64 1.4.5-1 [2778 kB] Get:17 http://mirror-ubc.debian.org/debian/ wheezy/main mpi-default-dev amd64 1.0.1 [3604 B] Get:18 http://mirror-ubc.debian.org/debian/ wheezy/main xmds amd64 1.6.6-7 [733 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 10.3 MB in 0s (15.8 MB/s) Selecting previously unselected package libgomp1:amd64. (Reading database ... 6657 files and directories currently installed.) Unpacking libgomp1:amd64 (from .../libgomp1_4.7.2-5_amd64.deb) ... Selecting previously unselected package libfftw3-3:amd64. Unpacking libfftw3-3:amd64 (from .../libfftw3-3_3.3.2-3.1_amd64.deb) ... Selecting previously unselected package libquadmath0:amd64. Unpacking libquadmath0:amd64 (from .../libquadmath0_4.7.2-5_amd64.deb) ... Selecting previously unselected package libgfortran3:amd64. Unpacking libgfortran3:amd64 (from .../libgfortran3_4.7.2-5_amd64.deb) ... Selecting previously unselected package adduser. Unpacking adduser (from .../adduser_3.113+nmu3_all.deb) ... Selecting previously unselected package libfftw3-bin. Unpacking libfftw3-bin (from .../libfftw3-bin_3.3.2-3.1_amd64.deb) ... Selecting previously unselected package libfftw3-dev:amd64. Unpacking libfftw3-dev:amd64 (from .../libfftw3-dev_3.3.2-3.1_amd64.deb) ... Selecting previously unselected package libnuma1. Unpacking libnuma1 (from .../libnuma1_2.0.8~rc4-1_amd64.deb) ... Selecting previously unselected package libtorque2. Unpacking libtorque2 (from .../libtorque2_2.4.16+dfsg-1+deb7u4_amd64.deb) ... Selecting previously unselected package libibverbs1. Unpacking libibverbs1 (from .../libibverbs1_1.1.6-1_amd64.deb) ... Selecting previously unselected package libopenmpi1.3. Unpacking libopenmpi1.3 (from .../libopenmpi1.3_1.4.5-1_amd64.deb) ... Selecting previously unselected package fftw2. Unpacking fftw2 (from .../fftw2_2.1.5-1_amd64.deb) ... Selecting previously unselected package fftw-dev. Unpacking fftw-dev (from .../fftw-dev_2.1.5-1_amd64.deb) ... Selecting previously unselected package libibverbs-dev. Unpacking libibverbs-dev (from .../libibverbs-dev_1.1.6-1_amd64.deb) ... Selecting previously unselected package openmpi-common. Unpacking openmpi-common (from .../openmpi-common_1.4.5-1_all.deb) ... Selecting previously unselected package libopenmpi-dev. Unpacking libopenmpi-dev (from .../libopenmpi-dev_1.4.5-1_amd64.deb) ... Selecting previously unselected package mpi-default-dev. Unpacking mpi-default-dev (from .../mpi-default-dev_1.0.1_amd64.deb) ... Selecting previously unselected package xmds. Unpacking xmds (from .../xmds_1.6.6-7_amd64.deb) ... Setting up libgomp1:amd64 (4.7.2-5) ... Setting up libfftw3-3:amd64 (3.3.2-3.1) ... Setting up libquadmath0:amd64 (4.7.2-5) ... Setting up libgfortran3:amd64 (4.7.2-5) ... Setting up adduser (3.113+nmu3) ... Setting up libfftw3-bin (3.3.2-3.1) ... Setting up libfftw3-dev:amd64 (3.3.2-3.1) ... Setting up libnuma1 (2.0.8~rc4-1) ... Setting up libtorque2 (2.4.16+dfsg-1+deb7u4) ... Setting up libibverbs1 (1.1.6-1) ... Setting up libopenmpi1.3 (1.4.5-1) ... Setting up fftw2 (2.1.5-1) ... Setting up fftw-dev (2.1.5-1) ... Setting up libibverbs-dev (1.1.6-1) ... Setting up openmpi-common (1.4.5-1) ... Setting up libopenmpi-dev (1.4.5-1) ... update-alternatives: using /usr/lib/openmpi/include to provide /usr/include/mpi (mpi) in auto mode Setting up mpi-default-dev (1.0.1) ... Setting up xmds (1.6.6-7) ... 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-y', 'install', 'xmds'] 0m10.8s INFO: Running scripts post_install 0m10.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_install_exceptions'] 0m10.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_install_exceptions'] 0m10.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m11.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m11.5s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmphl1p9s to jessie-lts 0m11.5s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ jessie main deb http://security.debian.org jessie/updates main 0m11.5s INFO: Running scripts pre_distupgrade 0m11.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m11.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m11.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m11.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m11.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m11.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m11.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', 'update'] 0m15.6s DUMP: Get:1 http://mirror-ubc.debian.org jessie Release.gpg [2420 B] Get:2 http://mirror-ubc.debian.org jessie Release [148 kB] Get:3 http://mirror-ubc.debian.org jessie/main amd64 Packages [6818 kB] Get:4 http://mirror-ubc.debian.org jessie/main Translation-en [4581 kB] Get:5 http://security.debian.org jessie/updates Release.gpg [1601 B] Get:6 http://security.debian.org jessie/updates Release [43.3 kB] Get:7 http://security.debian.org jessie/updates/main amd64 Packages [639 kB] Get:8 http://security.debian.org jessie/updates/main Translation-en [322 kB] Fetched 12.6 MB in 2s (5070 kB/s) Reading package lists... 0m15.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', 'update'] 0m15.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-yf', 'dist-upgrade'] 0m33.3s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: gcc-4.7-base libopenmpi1.3 The following NEW packages will be installed: acl dmsetup gcc-4.9-base init libaudit-common libaudit1 libc-dev-bin libc6-dev libcap2 libcap2-bin libcr0 libcryptsetup4 libdb5.3 libdebconfclient0 libdevmapper1.02.1 libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libgcrypt20 libgpg-error0 libhwloc-dev libhwloc5 libkmod2 libltdl-dev libltdl7 libncursesw5 libnuma-dev libopenmpi1.6 libpcre3 libprocps3 libsmartcols1 libsystemd0 libudev1 linux-libc-dev procps startpar systemd systemd-sysv udev The following packages will be upgraded: apt base-files base-passwd bash bsdutils coreutils dash debconf debconf-i18n debian-archive-keyring debianutils diffutils dpkg e2fslibs e2fsprogs fftw-dev fftw2 findutils gnupg gpgv grep gzip hostname initscripts libacl1 libapt-pkg4.12 libattr1 libblkid1 libbz2-1.0 libc-bin libc6 libcomerr2 libfftw3-3 libfftw3-bin libfftw3-dev libgcc1 libgfortran3 libgomp1 libibverbs-dev libibverbs1 liblocale-gettext-perl liblzma5 libmount1 libncurses5 libnuma1 libopenmpi-dev libpam-modules libpam-modules-bin libpam-runtime libpam0g libquadmath0 libreadline6 libselinux1 libsemanage-common libsemanage1 libsepol1 libslang2 libss2 libstdc++6 libtext-charwidth-perl libtext-iconv-perl libtinfo5 libusb-0.1-4 libustr-1.0-1 libuuid1 login lsb-base mount mpi-default-dev multiarch-support ncurses-base ncurses-bin openmpi-common passwd perl-base readline-common sed sensible-utils sysv-rc sysvinit sysvinit-utils tar tzdata ucf util-linux xz-utils zlib1g 87 upgraded, 40 newly installed, 2 to remove and 0 not upgraded. Need to get 47.2 MB of archives. After this operation, 47.0 MB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ jessie/main libc6 amd64 2.19-18+deb8u10 [4665 kB] Get:2 http://security.debian.org/ jessie/updates/main libgomp1 amd64 4.9.2-10+deb8u2 [37.8 kB] Get:3 http://security.debian.org/ jessie/updates/main gcc-4.9-base amd64 4.9.2-10+deb8u2 [160 kB] Get:4 http://mirror-ubc.debian.org/debian/ jessie/main libc-bin amd64 2.19-18+deb8u10 [1281 kB] Get:5 http://security.debian.org/ jessie/updates/main libstdc++6 amd64 4.9.2-10+deb8u2 [273 kB] Get:6 http://mirror-ubc.debian.org/debian/ jessie/main libltdl7 amd64 2.4.2-1.11+b1 [45.4 kB] Get:7 http://mirror-ubc.debian.org/debian/ jessie/main libnuma1 amd64 2.0.10-1 [32.5 kB] Get:8 http://mirror-ubc.debian.org/debian/ jessie/main libhwloc5 amd64 1.10.0-3 [86.9 kB] Get:9 http://mirror-ubc.debian.org/debian/ jessie/main libcr0 amd64 0.8.5-2.2 [32.7 kB] Get:10 http://security.debian.org/ jessie/updates/main libgfortran3 amd64 4.9.2-10+deb8u2 [254 kB] Get:11 http://mirror-ubc.debian.org/debian/ jessie/main libibverbs-dev amd64 1.1.8-1.1 [85.6 kB] Get:12 http://security.debian.org/ jessie/updates/main libgcc1 amd64 1:4.9.2-10+deb8u2 [39.4 kB] Get:13 http://mirror-ubc.debian.org/debian/ jessie/main libopenmpi-dev amd64 1.6.5-9.1+deb8u1 [449 kB] Get:14 http://security.debian.org/ jessie/updates/main libquadmath0 amd64 4.9.2-10+deb8u2 [129 kB] Get:15 http://mirror-ubc.debian.org/debian/ jessie/main fftw-dev amd64 2.1.5-1+b1 [334 kB] Get:16 http://mirror-ubc.debian.org/debian/ jessie/main fftw2 amd64 2.1.5-1+b1 [290 kB] Get:17 http://security.debian.org/ jessie/updates/main linux-libc-dev amd64 3.16.59-1 [1107 kB] Get:18 http://mirror-ubc.debian.org/debian/ jessie/main libibverbs1 amd64 1.1.8-1.1 [32.2 kB] Get:19 http://mirror-ubc.debian.org/debian/ jessie/main libopenmpi1.6 amd64 1.6.5-9.1+deb8u1 [1455 kB] Get:20 http://security.debian.org/ jessie/updates/main libgcrypt20 amd64 1.6.3-2+deb8u5 [394 kB] Get:21 http://mirror-ubc.debian.org/debian/ jessie/main openmpi-common all 1.6.5-9.1+deb8u1 [110 kB] Get:22 http://mirror-ubc.debian.org/debian/ jessie/main libc-dev-bin amd64 2.19-18+deb8u10 [238 kB] Get:23 http://mirror-ubc.debian.org/debian/ jessie/main libc6-dev amd64 2.19-18+deb8u10 [2003 kB] Get:24 http://mirror-ubc.debian.org/debian/ jessie/main libnuma-dev amd64 2.0.10-1 [45.3 kB] Get:25 http://mirror-ubc.debian.org/debian/ jessie/main libltdl-dev amd64 2.4.2-1.11+b1 [157 kB] Get:26 http://mirror-ubc.debian.org/debian/ jessie/main libhwloc-dev amd64 1.10.0-3 [142 kB] Get:27 http://mirror-ubc.debian.org/debian/ jessie/main base-files amd64 8+deb8u11 [78.2 kB] Get:28 http://mirror-ubc.debian.org/debian/ jessie/main sensible-utils all 0.0.9+deb8u1 [10.9 kB] Get:29 http://mirror-ubc.debian.org/debian/ jessie/main debianutils amd64 4.4+b1 [99.1 kB] Get:30 http://mirror-ubc.debian.org/debian/ jessie/main bash amd64 4.3-11+deb8u1 [1172 kB] Get:31 http://mirror-ubc.debian.org/debian/ jessie/main libgpg-error0 amd64 1.17-3 [94.9 kB] Get:32 http://security.debian.org/ jessie/updates/main libsystemd0 amd64 215-17+deb8u9 [89.8 kB] Get:33 http://security.debian.org/ jessie/updates/main libudev1 amd64 215-17+deb8u9 [58.1 kB] Get:34 http://mirror-ubc.debian.org/debian/ jessie/main bsdutils amd64 1:2.25.2-6 [94.0 kB] Get:35 http://mirror-ubc.debian.org/debian/ jessie/main libpcre3 amd64 2:8.35-3.3+deb8u4 [322 kB] Get:36 http://security.debian.org/ jessie/updates/main perl-base amd64 5.20.2-3+deb8u12 [1231 kB] Get:37 http://mirror-ubc.debian.org/debian/ jessie/main libselinux1 amd64 2.3-2 [89.8 kB] Get:38 http://mirror-ubc.debian.org/debian/ jessie/main coreutils amd64 8.23-4 [2727 kB] Get:39 http://security.debian.org/ jessie/updates/main tzdata all 2018i-0+deb8u1 [233 kB] Get:40 http://security.debian.org/ jessie/updates/main udev amd64 215-17+deb8u9 [877 kB] Get:41 http://mirror-ubc.debian.org/debian/ jessie/main dpkg amd64 1.17.27 [2994 kB] Get:42 http://security.debian.org/ jessie/updates/main systemd amd64 215-17+deb8u9 [2557 kB] Get:43 http://mirror-ubc.debian.org/debian/ jessie/main dash amd64 0.5.7-4+b1 [109 kB] Get:44 http://security.debian.org/ jessie/updates/main systemd-sysv amd64 215-17+deb8u9 [37.0 kB] Get:45 http://mirror-ubc.debian.org/debian/ jessie/main diffutils amd64 1:3.3-1+b1 [267 kB] Get:46 http://security.debian.org/ jessie/updates/main tar amd64 1.27.1-2+deb8u2 [676 kB] Get:47 http://mirror-ubc.debian.org/debian/ jessie/main e2fslibs amd64 1.42.12-2+b1 [186 kB] Get:48 http://mirror-ubc.debian.org/debian/ jessie/main e2fsprogs amd64 1.42.12-2+b1 [750 kB] Get:49 http://security.debian.org/ jessie/updates/main libapt-pkg4.12 amd64 1.0.9.8.5 [792 kB] Get:50 http://mirror-ubc.debian.org/debian/ jessie/main findutils amd64 4.4.2-9+b1 [485 kB] Get:51 http://security.debian.org/ jessie/updates/main apt amd64 1.0.9.8.5 [1109 kB] Get:52 http://mirror-ubc.debian.org/debian/ jessie/main grep amd64 2.20-4.1 [325 kB] Get:53 http://mirror-ubc.debian.org/debian/ jessie/main gzip amd64 1.6-4 [111 kB] Get:54 http://mirror-ubc.debian.org/debian/ jessie/main hostname amd64 3.15 [13.9 kB] Get:55 http://mirror-ubc.debian.org/debian/ jessie/main libaudit-common all 1:2.4-1 [13.5 kB] Get:56 http://mirror-ubc.debian.org/debian/ jessie/main libaudit1 amd64 1:2.4-1+b1 [44.7 kB] Get:57 http://mirror-ubc.debian.org/debian/ jessie/main libattr1 amd64 1:2.4.47-2 [18.3 kB] Get:58 http://mirror-ubc.debian.org/debian/ jessie/main libcap2 amd64 1:2.24-8 [15.3 kB] Get:59 http://mirror-ubc.debian.org/debian/ jessie/main libtext-charwidth-perl amd64 0.04-7+b3 [10.7 kB] Get:60 http://mirror-ubc.debian.org/debian/ jessie/main libtext-iconv-perl amd64 1.7-5+b2 [16.2 kB] Get:61 http://mirror-ubc.debian.org/debian/ jessie/main liblocale-gettext-perl amd64 1.05-8+b1 [19.0 kB] Get:62 http://mirror-ubc.debian.org/debian/ jessie/main debconf all 1.5.56+deb8u1 [167 kB] Get:63 http://mirror-ubc.debian.org/debian/ jessie/main libpam0g amd64 1.1.8-3.1+deb8u2+b1 [126 kB] Get:64 http://mirror-ubc.debian.org/debian/ jessie/main libsemanage-common all 2.3-1 [24.6 kB] Get:65 http://mirror-ubc.debian.org/debian/ jessie/main libsemanage1 amd64 2.3-1+b1 [90.2 kB] Get:66 http://mirror-ubc.debian.org/debian/ jessie/main libbz2-1.0 amd64 1.0.6-7+b3 [43.5 kB] Get:67 http://mirror-ubc.debian.org/debian/ jessie/main libsepol1 amd64 2.3-2 [127 kB] Get:68 http://mirror-ubc.debian.org/debian/ jessie/main libustr-1.0-1 amd64 1.0.4-3+b2 [79.6 kB] Get:69 http://mirror-ubc.debian.org/debian/ jessie/main libdb5.3 amd64 5.3.28-9+deb8u1 [680 kB] Get:70 http://mirror-ubc.debian.org/debian/ jessie/main libpam-modules-bin amd64 1.1.8-3.1+deb8u2+b1 [104 kB] Get:71 http://mirror-ubc.debian.org/debian/ jessie/main libpam-modules amd64 1.1.8-3.1+deb8u2+b1 [307 kB] Get:72 http://mirror-ubc.debian.org/debian/ jessie/main passwd amd64 1:4.2-3+deb8u4 [971 kB] Get:73 http://mirror-ubc.debian.org/debian/ jessie/main libuuid1 amd64 2.25.2-6 [64.7 kB] Get:74 http://mirror-ubc.debian.org/debian/ jessie/main libblkid1 amd64 2.25.2-6 [156 kB] Get:75 http://mirror-ubc.debian.org/debian/ jessie/main libmount1 amd64 2.25.2-6 [164 kB] Get:76 http://mirror-ubc.debian.org/debian/ jessie/main libsmartcols1 amd64 2.25.2-6 [110 kB] Get:77 http://mirror-ubc.debian.org/debian/ jessie/main startpar amd64 0.59-3 [21.8 kB] Get:78 http://mirror-ubc.debian.org/debian/ jessie/main sysvinit-utils amd64 2.88dsf-59 [84.4 kB] Get:79 http://mirror-ubc.debian.org/debian/ jessie/main sysv-rc all 2.88dsf-59 [82.8 kB] Get:80 http://mirror-ubc.debian.org/debian/ jessie/main mount amd64 2.25.2-6 [168 kB] Get:81 http://mirror-ubc.debian.org/debian/ jessie/main lsb-base all 4.1+Debian13+nmu1 [26.7 kB] Get:82 http://mirror-ubc.debian.org/debian/ jessie/main initscripts amd64 2.88dsf-59 [87.2 kB] Get:83 http://mirror-ubc.debian.org/debian/ jessie/main util-linux amd64 2.25.2-6 [845 kB] Get:84 http://mirror-ubc.debian.org/debian/ jessie/main libdevmapper1.02.1 amd64 2:1.02.90-2.2+deb8u1 [145 kB] Get:85 http://mirror-ubc.debian.org/debian/ jessie/main dmsetup amd64 2:1.02.90-2.2+deb8u1 [69.1 kB] Get:86 http://mirror-ubc.debian.org/debian/ jessie/main libcryptsetup4 amd64 2:1.6.6-5 [103 kB] Get:87 http://mirror-ubc.debian.org/debian/ jessie/main libkmod2 amd64 18-3 [46.2 kB] Get:88 http://mirror-ubc.debian.org/debian/ jessie/main libtinfo5 amd64 5.9+20140913-1+deb8u3 [282 kB] Get:89 http://mirror-ubc.debian.org/debian/ jessie/main libncurses5 amd64 5.9+20140913-1+deb8u3 [96.6 kB] Get:90 http://mirror-ubc.debian.org/debian/ jessie/main libncursesw5 amd64 5.9+20140913-1+deb8u3 [123 kB] Get:91 http://mirror-ubc.debian.org/debian/ jessie/main libprocps3 amd64 2:3.3.9-9+deb8u1 [56.7 kB] Get:92 http://mirror-ubc.debian.org/debian/ jessie/main procps amd64 2:3.3.9-9+deb8u1 [236 kB] Get:93 http://mirror-ubc.debian.org/debian/ jessie/main libacl1 amd64 2.2.52-2 [27.9 kB] Get:94 http://mirror-ubc.debian.org/debian/ jessie/main acl amd64 2.2.52-2 [58.4 kB] Get:95 http://mirror-ubc.debian.org/debian/ jessie/main libcap2-bin amd64 1:2.24-8 [25.4 kB] Get:96 http://mirror-ubc.debian.org/debian/ jessie/main init amd64 1.22 [4674 B] Get:97 http://mirror-ubc.debian.org/debian/ jessie/main login amd64 1:4.2-3+deb8u4 [722 kB] Get:98 http://mirror-ubc.debian.org/debian/ jessie/main ncurses-bin amd64 5.9+20140913-1+deb8u3 [347 kB] Get:99 http://mirror-ubc.debian.org/debian/ jessie/main sed amd64 4.2.2-4+deb8u1 [243 kB] Get:100 http://mirror-ubc.debian.org/debian/ jessie/main sysvinit amd64 2.88dsf-59 [99.9 kB] Get:101 http://mirror-ubc.debian.org/debian/ jessie/main liblzma5 amd64 5.1.1alpha+20120614-2+b3 [194 kB] Get:102 http://mirror-ubc.debian.org/debian/ jessie/main zlib1g amd64 1:1.2.8.dfsg-2+b1 [88.8 kB] Get:103 http://mirror-ubc.debian.org/debian/ jessie/main gpgv amd64 1.4.18-7+deb8u5 [209 kB] Get:104 http://mirror-ubc.debian.org/debian/ jessie/main debian-archive-keyring all 2017.5~deb8u1 [56.7 kB] Get:105 http://mirror-ubc.debian.org/debian/ jessie/main readline-common all 6.3-8 [57.7 kB] Get:106 http://mirror-ubc.debian.org/debian/ jessie/main libreadline6 amd64 6.3-8+b3 [143 kB] Get:107 http://mirror-ubc.debian.org/debian/ jessie/main libusb-0.1-4 amd64 2:0.1.12-25 [21.9 kB] Get:108 http://mirror-ubc.debian.org/debian/ jessie/main gnupg amd64 1.4.18-7+deb8u5 [1150 kB] Get:109 http://mirror-ubc.debian.org/debian/ jessie/main libdebconfclient0 amd64 0.192 [46.2 kB] Get:110 http://mirror-ubc.debian.org/debian/ jessie/main base-passwd amd64 3.5.37 [64.5 kB] Get:111 http://mirror-ubc.debian.org/debian/ jessie/main ncurses-base all 5.9+20140913-1+deb8u3 [222 kB] Get:112 http://mirror-ubc.debian.org/debian/ jessie/main libslang2 amd64 2.3.0-2 [491 kB] Get:113 http://mirror-ubc.debian.org/debian/ jessie/main libcomerr2 amd64 1.42.12-2+b1 [60.7 kB] Get:114 http://mirror-ubc.debian.org/debian/ jessie/main libss2 amd64 1.42.12-2+b1 [65.0 kB] Get:115 http://mirror-ubc.debian.org/debian/ jessie/main libfftw3-bin amd64 3.3.4-2 [48.6 kB] Get:116 http://mirror-ubc.debian.org/debian/ jessie/main libfftw3-dev amd64 3.3.4-2 [2180 kB] Get:117 http://mirror-ubc.debian.org/debian/ jessie/main libfftw3-3 amd64 3.3.4-2 [18.7 kB] Get:118 http://mirror-ubc.debian.org/debian/ jessie/main libfftw3-long3 amd64 3.3.4-2 [312 kB] Get:119 http://mirror-ubc.debian.org/debian/ jessie/main libfftw3-quad3 amd64 3.3.4-2 [556 kB] Get:120 http://mirror-ubc.debian.org/debian/ jessie/main libfftw3-single3 amd64 3.3.4-2 [754 kB] Get:121 http://mirror-ubc.debian.org/debian/ jessie/main libfftw3-double3 amd64 3.3.4-2 [722 kB] Get:122 http://mirror-ubc.debian.org/debian/ jessie/main libpam-runtime all 1.1.8-3.1+deb8u2 [212 kB] Get:123 http://mirror-ubc.debian.org/debian/ jessie/main multiarch-support amd64 2.19-18+deb8u10 [181 kB] Get:124 http://mirror-ubc.debian.org/debian/ jessie/main debconf-i18n all 1.5.56+deb8u1 [206 kB] Get:125 http://mirror-ubc.debian.org/debian/ jessie/main ucf all 3.0030 [69.7 kB] Get:126 http://mirror-ubc.debian.org/debian/ jessie/main xz-utils amd64 5.1.1alpha+20120614-2+b3 [221 kB] Get:127 http://mirror-ubc.debian.org/debian/ jessie/main mpi-default-dev amd64 1.0.2+nmu2 [3962 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 47.2 MB in 1s (25.5 MB/s) (Reading database ... 7808 files and directories currently installed.) Preparing to replace libc6:amd64 2.13-38+deb7u10 (using .../libc6_2.19-18+deb8u10_amd64.deb) ... Checking for services that may need to be restarted... Checking init scripts... Unpacking replacement libc6:amd64 ... Setting up libc6:amd64 (2.19-18+deb8u10) ... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. (Reading database ... 7811 files and directories currently installed.) Preparing to replace libc-bin 2.13-38+deb7u10 (using .../libc-bin_2.19-18+deb8u10_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.19-18+deb8u10) ... Installing new version of config file /etc/bindresvport.blacklist ... Installing new version of config file /etc/gai.conf ... (Reading database ... 7801 files and directories currently installed.) Preparing to replace libgomp1:amd64 4.7.2-5 (using .../libgomp1_4.9.2-10+deb8u2_amd64.deb) ... Unpacking replacement libgomp1:amd64 ... dpkg: gcc-4.7-base:amd64: dependency problems, but removing anyway as you requested: libstdc++6:amd64 depends on gcc-4.7-base (= 4.7.2-5). libgfortran3:amd64 depends on gcc-4.7-base (= 4.7.2-5). libgcc1:amd64 depends on gcc-4.7-base (= 4.7.2-5). libquadmath0:amd64 depends on gcc-4.7-base (= 4.7.2-5). (Reading database ... 7801 files and directories currently installed.) Removing gcc-4.7-base:amd64 ... Selecting previously unselected package gcc-4.9-base:amd64. (Reading database ... 7792 files and directories currently installed.) Unpacking gcc-4.9-base:amd64 (from .../gcc-4.9-base_4.9.2-10+deb8u2_amd64.deb) ... Setting up gcc-4.9-base:amd64 (4.9.2-10+deb8u2) ... (Reading database ... 7801 files and directories currently installed.) Preparing to replace libstdc++6:amd64 4.7.2-5 (using .../libstdc++6_4.9.2-10+deb8u2_amd64.deb) ... Unpacking replacement libstdc++6:amd64 ... Setting up libstdc++6:amd64 (4.9.2-10+deb8u2) ... 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Selecting previously unselected package libhwloc5:amd64. Unpacking libhwloc5:amd64 (from .../libhwloc5_1.10.0-3_amd64.deb) ... Selecting previously unselected package libcr0. Unpacking libcr0 (from .../libcr0_0.8.5-2.2_amd64.deb) ... Preparing to replace libibverbs-dev 1.1.6-1 (using .../libibverbs-dev_1.1.8-1.1_amd64.deb) ... Unpacking replacement libibverbs-dev ... Preparing to replace libopenmpi-dev 1.4.5-1 (using .../libopenmpi-dev_1.6.5-9.1+deb8u1_amd64.deb) ... Unpacking replacement libopenmpi-dev ... Preparing to replace fftw-dev 2.1.5-1 (using .../fftw-dev_2.1.5-1+b1_amd64.deb) ... Unpacking replacement fftw-dev ... Preparing to replace fftw2 2.1.5-1 (using .../fftw2_2.1.5-1+b1_amd64.deb) ... Unpacking replacement fftw2 ... (Reading database ... 7858 files and directories currently installed.) Removing libopenmpi1.3 ... Processing triggers for libc-bin ... (Reading database ... 7755 files and directories currently installed.) Preparing to replace libibverbs1 1.1.6-1 (using .../libibverbs1_1.1.8-1.1_amd64.deb) ... Unpacking replacement libibverbs1 ... Selecting previously unselected package libopenmpi1.6. Unpacking libopenmpi1.6 (from .../libopenmpi1.6_1.6.5-9.1+deb8u1_amd64.deb) ... Preparing to replace openmpi-common 1.4.5-1 (using .../openmpi-common_1.6.5-9.1+deb8u1_all.deb) ... Unpacking replacement openmpi-common ... Selecting previously unselected package libc-dev-bin. Unpacking libc-dev-bin (from .../libc-dev-bin_2.19-18+deb8u10_amd64.deb) ... Selecting previously unselected package linux-libc-dev:amd64. Unpacking linux-libc-dev:amd64 (from .../linux-libc-dev_3.16.59-1_amd64.deb) ... Selecting previously unselected package libc6-dev:amd64. Unpacking libc6-dev:amd64 (from .../libc6-dev_2.19-18+deb8u10_amd64.deb) ... Selecting previously unselected package libnuma-dev:amd64. Unpacking libnuma-dev:amd64 (from .../libnuma-dev_2.0.10-1_amd64.deb) ... Selecting previously unselected package libltdl-dev:amd64. Unpacking libltdl-dev:amd64 (from .../libltdl-dev_2.4.2-1.11+b1_amd64.deb) ... Selecting previously unselected package libhwloc-dev:amd64. Unpacking libhwloc-dev:amd64 (from .../libhwloc-dev_1.10.0-3_amd64.deb) ... Preparing to replace base-files 7.1wheezy11 (using .../base-files_8+deb8u11_amd64.deb) ... Unpacking replacement base-files ... Setting up base-files (8+deb8u11) ... Installing new version of config file /etc/debian_version ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Updating /etc/profile to current default. Updating /etc/nsswitch.conf to current default. (Reading database ... 9261 files and directories currently installed.) Preparing to replace sensible-utils 0.0.7 (using .../sensible-utils_0.0.9+deb8u1_all.deb) ... Unpacking replacement sensible-utils ... Setting up sensible-utils (0.0.9+deb8u1) ... (Reading database ... 9263 files and directories currently installed.) Preparing to replace debianutils 4.3.2 (using .../debianutils_4.4+b1_amd64.deb) ... Unpacking replacement debianutils ... Setting up debianutils (4.4+b1) ... (Reading database ... 9284 files and directories currently installed.) Preparing to replace bash 4.2+dfsg-0.1+deb7u3 (using .../bash_4.3-11+deb8u1_amd64.deb) ... Unpacking replacement bash ... Setting up bash (4.3-11+deb8u1) ... Installing new version of config file /etc/bash.bashrc ... Installing new version of config file /etc/skel/.bashrc ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode Selecting previously unselected package libgpg-error0:amd64. (Reading database ... 9292 files and directories currently installed.) Unpacking libgpg-error0:amd64 (from .../libgpg-error0_1.17-3_amd64.deb) ... Setting up libgpg-error0:amd64 (1.17-3) ... Processing triggers for libc-bin ... Selecting previously unselected package libgcrypt20:amd64. (Reading database ... 9317 files and directories currently installed.) Unpacking libgcrypt20:amd64 (from .../libgcrypt20_1.6.3-2+deb8u5_amd64.deb) ... Setting up libgcrypt20:amd64 (1.6.3-2+deb8u5) ... Processing triggers for libc-bin ... Selecting previously unselected package libsystemd0:amd64. (Reading database ... 9327 files and directories currently installed.) Unpacking libsystemd0:amd64 (from .../libsystemd0_215-17+deb8u9_amd64.deb) ... Setting up libsystemd0:amd64 (215-17+deb8u9) ... Processing triggers for libc-bin ... (Reading database ... 9332 files and directories currently installed.) Preparing to replace bsdutils 1:2.20.1-5.3 (using .../bsdutils_1%3a2.25.2-6_amd64.deb) ... Unpacking replacement bsdutils ... Setting up bsdutils (1:2.25.2-6) ... Selecting previously unselected package libpcre3:amd64. (Reading database ... 9338 files and directories currently installed.) Unpacking libpcre3:amd64 (from .../libpcre3_2%3a8.35-3.3+deb8u4_amd64.deb) ... Setting up libpcre3:amd64 (2:8.35-3.3+deb8u4) ... Processing triggers for libc-bin ... (Reading database ... 9351 files and directories currently installed.) Preparing to replace libselinux1:amd64 2.1.9-5 (using .../libselinux1_2.3-2_amd64.deb) ... Unpacking replacement libselinux1:amd64 ... Setting up libselinux1:amd64 (2.3-2) ... Processing triggers for libc-bin ... (Reading database ... 9349 files and directories currently installed.) Preparing to replace coreutils 8.13-3.5 (using .../coreutils_8.23-4_amd64.deb) ... Unpacking replacement coreutils ... Setting up coreutils (8.23-4) ... (Reading database ... 9357 files and directories currently installed.) Preparing to replace dpkg 1.16.18 (using .../dpkg_1.17.27_amd64.deb) ... Unpacking replacement dpkg ... Setting up dpkg (1.17.27) ... Installing new version of config file /etc/cron.daily/dpkg ... (Reading database ... 9348 files and directories currently installed.) Preparing to unpack .../dash_0.5.7-4+b1_amd64.deb ... Unpacking dash (0.5.7-4+b1) over (0.5.7-3) ... Setting up dash (0.5.7-4+b1) ... (Reading database ... 9348 files and directories currently installed.) Preparing to unpack .../diffutils_1%3a3.3-1+b1_amd64.deb ... Unpacking diffutils (1:3.3-1+b1) over (1:3.2-6) ... Setting up diffutils (1:3.3-1+b1) ... (Reading database ... 9350 files and directories currently installed.) Preparing to unpack .../e2fslibs_1.42.12-2+b1_amd64.deb ... Unpacking e2fslibs:amd64 (1.42.12-2+b1) over (1.42.5-1.1+deb7u1) ... Setting up e2fslibs:amd64 (1.42.12-2+b1) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... (Reading database ... 9351 files and directories currently installed.) Preparing to unpack .../e2fsprogs_1.42.12-2+b1_amd64.deb ... Unpacking e2fsprogs (1.42.12-2+b1) over (1.42.5-1.1+deb7u1) ... Setting up e2fsprogs (1.42.12-2+b1) ... (Reading database ... 9357 files and directories currently installed.) Preparing to unpack .../findutils_4.4.2-9+b1_amd64.deb ... Unpacking findutils (4.4.2-9+b1) over (4.4.2-4) ... Setting up findutils (4.4.2-9+b1) ... (Reading database ... 9358 files and directories currently installed.) Preparing to unpack .../grep_2.20-4.1_amd64.deb ... Unpacking grep (2.20-4.1) over (2.12-2) ... Setting up grep (2.20-4.1) ... (Reading database ... 9359 files and directories currently installed.) Preparing to unpack .../archives/gzip_1.6-4_amd64.deb ... Unpacking gzip (1.6-4) over (1.5-1.1) ... Setting up gzip (1.6-4) ... (Reading database ... 9358 files and directories currently installed.) Preparing to unpack .../hostname_3.15_amd64.deb ... Unpacking hostname (3.15) over (3.11) ... Setting up hostname (3.15) ... Selecting previously unselected package libaudit-common. (Reading database ... 9358 files and directories currently installed.) 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Installing new version of config file /etc/cron.daily/apt ... Processing triggers for libc-bin (2.19-18+deb8u10) ... Selecting previously unselected package libdebconfclient0:amd64. (Reading database ... 9956 files and directories currently installed.) Preparing to unpack .../libdebconfclient0_0.192_amd64.deb ... Unpacking libdebconfclient0:amd64 (0.192) ... Setting up libdebconfclient0:amd64 (0.192) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... (Reading database ... 9961 files and directories currently installed.) Preparing to unpack .../base-passwd_3.5.37_amd64.deb ... Unpacking base-passwd (3.5.37) over (3.5.26) ... Setting up base-passwd (3.5.37) ... Changing shell of daemon from /bin/sh to /usr/sbin/nologin Changing shell of bin from /bin/sh to /usr/sbin/nologin Changing shell of sys from /bin/sh to /usr/sbin/nologin Changing shell of games from /bin/sh to /usr/sbin/nologin Changing shell of man from /bin/sh to /usr/sbin/nologin Changing shell of lp from /bin/sh to /usr/sbin/nologin Changing shell of mail from /bin/sh to /usr/sbin/nologin Changing shell of news from /bin/sh to /usr/sbin/nologin Changing shell of uucp from /bin/sh to /usr/sbin/nologin Changing shell of proxy from /bin/sh to /usr/sbin/nologin Changing shell of www-data from /bin/sh to /usr/sbin/nologin Changing shell of backup from /bin/sh to /usr/sbin/nologin Changing shell of list from /bin/sh to /usr/sbin/nologin Changing shell of irc from /bin/sh to /usr/sbin/nologin Changing shell of gnats from /bin/sh to /usr/sbin/nologin Changing shell of nobody from /bin/sh to /usr/sbin/nologin 16 changes have been made, rewriting files Writing passwd-file to /etc/passwd Writing shadow-file to /etc/shadow Writing group-file to /etc/group (Reading database ... 9962 files and directories currently installed.) Preparing to unpack .../ncurses-base_5.9+20140913-1+deb8u3_all.deb ... Unpacking ncurses-base (5.9+20140913-1+deb8u3) over (5.9-10) ... Setting up ncurses-base (5.9+20140913-1+deb8u3) ... (Reading database ... 9962 files and directories currently installed.) Preparing to unpack .../libslang2_2.3.0-2_amd64.deb ... Unpacking libslang2:amd64 (2.3.0-2) over (2.2.4-15) ... Setting up libslang2:amd64 (2.3.0-2) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... (Reading database ... 9962 files and directories currently installed.) Preparing to unpack .../libcomerr2_1.42.12-2+b1_amd64.deb ... Unpacking libcomerr2:amd64 (1.42.12-2+b1) over (1.42.5-1.1+deb7u1) ... Setting up libcomerr2:amd64 (1.42.12-2+b1) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... (Reading database ... 9963 files and directories currently installed.) Preparing to unpack .../libss2_1.42.12-2+b1_amd64.deb ... Unpacking libss2:amd64 (1.42.12-2+b1) over (1.42.5-1.1+deb7u1) ... Setting up libss2:amd64 (1.42.12-2+b1) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... (Reading database ... 9964 files and directories currently installed.) Preparing to unpack .../libfftw3-bin_3.3.4-2_amd64.deb ... Unpacking libfftw3-bin (3.3.4-2) over (3.3.2-3.1) ... Preparing to unpack .../libfftw3-dev_3.3.4-2_amd64.deb ... Unpacking libfftw3-dev:amd64 (3.3.4-2) over (3.3.2-3.1) ... Preparing to unpack .../libfftw3-3_3.3.4-2_amd64.deb ... Unpacking libfftw3-3:amd64 (3.3.4-2) over (3.3.2-3.1) ... Selecting previously unselected package libfftw3-long3:amd64. Preparing to unpack .../libfftw3-long3_3.3.4-2_amd64.deb ... Unpacking libfftw3-long3:amd64 (3.3.4-2) ... Selecting previously unselected package libfftw3-quad3:amd64. Preparing to unpack .../libfftw3-quad3_3.3.4-2_amd64.deb ... Unpacking libfftw3-quad3:amd64 (3.3.4-2) ... Selecting previously unselected package libfftw3-single3:amd64. Preparing to unpack .../libfftw3-single3_3.3.4-2_amd64.deb ... Unpacking libfftw3-single3:amd64 (3.3.4-2) ... Selecting previously unselected package libfftw3-double3:amd64. Preparing to unpack .../libfftw3-double3_3.3.4-2_amd64.deb ... Unpacking libfftw3-double3:amd64 (3.3.4-2) ... Preparing to unpack .../libpam-runtime_1.1.8-3.1+deb8u2_all.deb ... Unpacking libpam-runtime (1.1.8-3.1+deb8u2) over (1.1.3-7.1) ... Setting up libpam-runtime (1.1.8-3.1+deb8u2) ... (Reading database ... 10048 files and directories currently installed.) Preparing to unpack .../multiarch-support_2.19-18+deb8u10_amd64.deb ... Unpacking multiarch-support (2.19-18+deb8u10) over (2.13-38+deb7u10) ... Setting up multiarch-support (2.19-18+deb8u10) ... (Reading database ... 10048 files and directories currently installed.) Preparing to unpack .../debconf-i18n_1.5.56+deb8u1_all.deb ... Unpacking debconf-i18n (1.5.56+deb8u1) over (1.5.49) ... Preparing to unpack .../archives/ucf_3.0030_all.deb ... Unpacking ucf (3.0030) over (3.0025+nmu3) ... Preparing to unpack .../xz-utils_5.1.1alpha+20120614-2+b3_amd64.deb ... Unpacking xz-utils (5.1.1alpha+20120614-2+b3) over (5.1.1alpha+20120614-2) ... Preparing to unpack .../mpi-default-dev_1.0.2+nmu2_amd64.deb ... Unpacking mpi-default-dev (1.0.2+nmu2) over (1.0.1) ... Setting up libgomp1:amd64 (4.9.2-10+deb8u2) ... Setting up libquadmath0:amd64 (4.9.2-10+deb8u2) ... Setting up libgfortran3:amd64 (4.9.2-10+deb8u2) ... Setting up libltdl7:amd64 (2.4.2-1.11+b1) ... Setting up libnuma1:amd64 (2.0.10-1) ... Setting up libhwloc5:amd64 (1.10.0-3) ... Setting up libcr0 (0.8.5-2.2) ... Setting up libibverbs1 (1.1.8-1.1) ... Setting up libibverbs-dev (1.1.8-1.1) ... Setting up libopenmpi1.6 (1.6.5-9.1+deb8u1) ... Setting up openmpi-common (1.6.5-9.1+deb8u1) ... Setting up libc-dev-bin (2.19-18+deb8u10) ... Setting up linux-libc-dev:amd64 (3.16.59-1) ... Setting up libc6-dev:amd64 (2.19-18+deb8u10) ... Setting up libnuma-dev:amd64 (2.0.10-1) ... Setting up libltdl-dev:amd64 (2.4.2-1.11+b1) ... Setting up libhwloc-dev:amd64 (1.10.0-3) ... Setting up libopenmpi-dev (1.6.5-9.1+deb8u1) ... Setting up fftw2 (2.1.5-1+b1) ... Setting up fftw-dev (2.1.5-1+b1) ... Setting up libtext-charwidth-perl (0.04-7+b3) ... Setting up libtext-iconv-perl (1.7-5+b2) ... Setting up liblocale-gettext-perl (1.05-8+b1) ... Setting up libfftw3-double3:amd64 (3.3.4-2) ... Setting up libfftw3-long3:amd64 (3.3.4-2) ... Setting up libfftw3-quad3:amd64 (3.3.4-2) ... Setting up libfftw3-single3:amd64 (3.3.4-2) ... Setting up libfftw3-bin (3.3.4-2) ... Setting up libfftw3-dev:amd64 (3.3.4-2) ... Setting up libfftw3-3:amd64 (3.3.4-2) ... Setting up debconf-i18n (1.5.56+deb8u1) ... Setting up ucf (3.0030) ... Setting up xz-utils (5.1.1alpha+20120614-2+b3) ... Setting up mpi-default-dev (1.0.2+nmu2) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... 0m33.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-yf', 'dist-upgrade'] 0m33.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m35.0s DUMP: 0d9b1a13797d09b04ee5bcaca8c8e441 - 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'show', '--no-all-versions', 'xmds'] 0m35.0s DUMP: Package: xmds Version: 1.6.6-7 Installed-Size: 2487 Maintainer: Debian Science Team Architecture: amd64 Depends: libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.6), fftw-dev, libfftw3-dev, mpi-default-dev Suggests: octave Description-en: eXtensible Multi-Dimensional Simulator XMDS is a code generator that integrates equations, from Ordinary Differential Equations (ODEs) up to stochastic Partial Differential Equations (PDEs). You write them down in human readable form in an XML file, and it goes away and writes and compiles a C++ program that integrates those equations as fast as it can possibly be done in your architecture. Description-md5: c704afd7e308c3a31863389f98d203a0 Homepage: http://xmds.sourceforge.net/ Tag: implemented-in::c++, role::program Section: science Priority: extra Filename: pool/main/x/xmds/xmds_1.6.6-7_amd64.deb Size: 732506 MD5sum: f9f5f1950d512cca5274a661325a8161 SHA1: 10411b7fed24bce826baa2e408768ad8806bf4d7 SHA256: 739f73bb812fac8e3774f90c6e7ac6a4daed18a89f094bb5bc20744cf33d2785 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'show', '--no-all-versions', 'xmds'] 0m35.0s INFO: apt-cache knows about the following packages: xmds 0m35.0s INFO: Running scripts pre_install 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_database-server'] 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_database-server'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_exceptions'] 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_exceptions'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_extras'] 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_extras'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture'] 0m35.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture'] 0m35.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m35.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m35.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy'] 0m35.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ jessie/updates/main Translation-en 500 http://security.debian.org/ jessie/updates/main amd64 Packages release v=8,o=Debian,a=oldstable,n=jessie,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ jessie/main Translation-en 500 http://mirror-ubc.debian.org/debian/ jessie/main amd64 Packages release v=8.11,o=Debian,a=oldstable,n=jessie,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m35.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy'] 0m35.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy', 'xmds'] 0m35.1s DUMP: xmds: Installed: 1.6.6-7 Candidate: 1.6.6-7 Version table: *** 1.6.6-7 0 500 http://mirror-ubc.debian.org/debian/ jessie/main amd64 Packages 100 /var/lib/dpkg/status 0m35.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy', 'xmds'] 0m35.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-y', 'install', 'xmds'] 0m35.5s DUMP: Reading package lists... Building dependency tree... Reading state information... xmds is already the newest version. The following packages were automatically installed and are no longer required: libfftw3-3 libtorque2 Use 'apt-get autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-y', 'install', 'xmds'] 0m35.5s INFO: Running scripts post_install 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_install_exceptions'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_install_exceptions'] 0m35.5s INFO: Running scripts post_distupgrade 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_exceptions'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_exceptions'] 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m35.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m35.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_zz_backports'] 0m35.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_distupgrade_zz_backports'] 0m35.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m36.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m36.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m37.1s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m37.1s INFO: Running scripts pre_install 0m37.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_database-server'] 0m37.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_database-server'] 0m37.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_exceptions'] 0m37.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_exceptions'] 0m37.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_extras'] 0m37.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_extras'] 0m37.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture'] 0m37.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture'] 0m37.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m37.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m37.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy'] 0m37.2s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ jessie/updates/main Translation-en 500 http://security.debian.org/ jessie/updates/main amd64 Packages release v=8,o=Debian,a=oldstable,n=jessie,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ jessie/main Translation-en 500 http://mirror-ubc.debian.org/debian/ jessie/main amd64 Packages release v=8.11,o=Debian,a=oldstable,n=jessie,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m37.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy'] 0m37.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy', 'xmds'] 0m37.3s DUMP: xmds: Installed: 1.6.6-7 Candidate: 1.6.6-7 Version table: *** 1.6.6-7 0 500 http://mirror-ubc.debian.org/debian/ jessie/main amd64 Packages 100 /var/lib/dpkg/status 0m37.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-cache', 'policy', 'xmds'] 0m37.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-y', 'install', 'xmds=1.6.6-7'] 0m37.6s DUMP: Reading package lists... Building dependency tree... Reading state information... xmds is already the newest version. The following packages were automatically installed and are no longer required: libfftw3-3 libtorque2 Use 'apt-get autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m37.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', '-y', 'install', 'xmds=1.6.6-7'] 0m37.6s INFO: Running scripts post_install 0m37.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_install_exceptions'] 0m37.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_install_exceptions'] 0m37.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m38.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m38.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m38.4s DUMP: install ok installed acl acl 2.2.52-2 install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 1.0.9.8.5 install ok installed base-files base-files 8+deb8u11 install ok installed base-passwd base-passwd 3.5.37 install ok installed bash bash 4.3-11+deb8u1 install ok installed bsdutils bsdutils 1:2.25.2-6 install ok installed coreutils coreutils 8.23-4 install ok installed dash dash 0.5.7-4+b1 install ok installed debconf debconf 1.5.56+deb8u1 install ok installed debconf-i18n debconf-i18n 1.5.56+deb8u1 install ok installed debian-archive-keyring debian-archive-keyring 2017.5~deb8u1 install ok installed debianutils debianutils 4.4+b1 install ok installed diffutils diffutils 1:3.3-1+b1 install ok installed dmsetup dmsetup 2:1.02.90-2.2+deb8u1 install ok installed dpkg dpkg 1.17.27 install ok installed e2fslibs:amd64 e2fslibs 1.42.12-2+b1 install ok installed e2fsprogs e2fsprogs 1.42.12-2+b1 install ok installed fftw-dev fftw-dev 2.1.5-1+b1 install ok installed fftw2 fftw2 2.1.5-1+b1 install ok installed findutils findutils 4.4.2-9+b1 install ok installed gcc-4.9-base:amd64 gcc-4.9-base 4.9.2-10+deb8u2 install ok installed gnupg gnupg 1.4.18-7+deb8u5 install ok installed gpgv gpgv 1.4.18-7+deb8u5 install ok installed grep grep 2.20-4.1 install ok installed gzip gzip 1.6-4 install ok installed hostname hostname 3.15 install ok installed init init 1.22 install ok installed initscripts initscripts 2.88dsf-59 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.52-2 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 1.0.9.8.5 install ok installed libattr1:amd64 libattr1 1:2.4.47-2 install ok installed libaudit-common libaudit-common 1:2.4-1 install ok installed libaudit1:amd64 libaudit1 1:2.4-1+b1 install ok installed libblkid1:amd64 libblkid1 2.25.2-6 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-7+b3 install ok installed libc-bin libc-bin 2.19-18+deb8u10 install ok installed libc-dev-bin libc-dev-bin 2.19-18+deb8u10 install ok installed libc6:amd64 libc6 2.19-18+deb8u10 install ok installed libc6-dev:amd64 libc6-dev 2.19-18+deb8u10 install ok installed libcap2:amd64 libcap2 1:2.24-8 install ok installed libcap2-bin libcap2-bin 1:2.24-8 install ok installed libcomerr2:amd64 libcomerr2 1.42.12-2+b1 install ok installed libcr0 libcr0 0.8.5-2.2 install ok installed libcryptsetup4:amd64 libcryptsetup4 2:1.6.6-5 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-9+deb8u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.192 install ok installed libdevmapper1.02.1:amd64 libdevmapper1.02.1 2:1.02.90-2.2+deb8u1 install ok installed libfftw3-3:amd64 libfftw3-3 3.3.4-2 install ok installed libfftw3-bin libfftw3-bin 3.3.4-2 install ok installed libfftw3-dev:amd64 libfftw3-dev 3.3.4-2 install ok installed libfftw3-double3:amd64 libfftw3-double3 3.3.4-2 install ok installed libfftw3-long3:amd64 libfftw3-long3 3.3.4-2 install ok installed libfftw3-quad3:amd64 libfftw3-quad3 3.3.4-2 install ok installed libfftw3-single3:amd64 libfftw3-single3 3.3.4-2 install ok installed libgcc1:amd64 libgcc1 1:4.9.2-10+deb8u2 install ok installed libgcrypt20:amd64 libgcrypt20 1.6.3-2+deb8u5 install ok installed libgfortran3:amd64 libgfortran3 4.9.2-10+deb8u2 install ok installed libgomp1:amd64 libgomp1 4.9.2-10+deb8u2 install ok installed libgpg-error0:amd64 libgpg-error0 1.17-3 install ok installed libhwloc-dev:amd64 libhwloc-dev 1.10.0-3 install ok installed libhwloc5:amd64 libhwloc5 1.10.0-3 install ok installed libibverbs-dev libibverbs-dev 1.1.8-1.1 install ok installed libibverbs1 libibverbs1 1.1.8-1.1 install ok installed libkmod2:amd64 libkmod2 18-3 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-8+b1 install ok installed libltdl-dev:amd64 libltdl-dev 2.4.2-1.11+b1 install ok installed libltdl7:amd64 libltdl7 2.4.2-1.11+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2+b3 install ok installed libmount1:amd64 libmount1 2.25.2-6 install ok installed libncurses5:amd64 libncurses5 5.9+20140913-1+deb8u3 install ok installed libncursesw5:amd64 libncursesw5 5.9+20140913-1+deb8u3 install ok installed libnuma-dev:amd64 libnuma-dev 2.0.10-1 install ok installed libnuma1:amd64 libnuma1 2.0.10-1 install ok installed libopenmpi-dev libopenmpi-dev 1.6.5-9.1+deb8u1 deinstall ok config-files libopenmpi1.3 libopenmpi1.3 1.4.5-1 install ok installed libopenmpi1.6 libopenmpi1.6 1.6.5-9.1+deb8u1 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.1+deb8u2+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.1+deb8u2+b1 install ok installed libpam-runtime libpam-runtime 1.1.8-3.1+deb8u2 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.1+deb8u2+b1 install ok installed libpcre3:amd64 libpcre3 2:8.35-3.3+deb8u4 install ok installed libprocps3:amd64 libprocps3 2:3.3.9-9+deb8u1 install ok installed libquadmath0:amd64 libquadmath0 4.9.2-10+deb8u2 install ok installed libreadline6:amd64 libreadline6 6.3-8+b3 install ok installed libselinux1:amd64 libselinux1 2.3-2 install ok installed libsemanage-common libsemanage-common 2.3-1 install ok installed libsemanage1:amd64 libsemanage1 2.3-1+b1 install ok installed libsepol1:amd64 libsepol1 2.3-2 install ok installed libslang2:amd64 libslang2 2.3.0-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.25.2-6 install ok installed libss2:amd64 libss2 1.42.12-2+b1 install ok installed libstdc++6:amd64 libstdc++6 4.9.2-10+deb8u2 install ok installed libsystemd0:amd64 libsystemd0 215-17+deb8u9 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b3 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5+b2 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9+20140913-1+deb8u3 install ok installed libtorque2 libtorque2 2.4.16+dfsg-1+deb7u4 install ok installed libudev1:amd64 libudev1 215-17+deb8u9 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-25 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3+b2 install ok installed libuuid1:amd64 libuuid1 2.25.2-6 install ok installed linux-libc-dev:amd64 linux-libc-dev 3.16.59-1 install ok installed login login 1:4.2-3+deb8u4 install ok installed lsb-base lsb-base 4.1+Debian13+nmu1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.25.2-6 install ok installed mpi-default-dev mpi-default-dev 1.0.2+nmu2 install ok installed multiarch-support multiarch-support 2.19-18+deb8u10 install ok installed ncurses-base ncurses-base 5.9+20140913-1+deb8u3 install ok installed ncurses-bin ncurses-bin 5.9+20140913-1+deb8u3 install ok installed openmpi-common openmpi-common 1.6.5-9.1+deb8u1 install ok installed passwd passwd 1:4.2-3+deb8u4 install ok installed perl-base perl-base 5.20.2-3+deb8u12 install ok installed procps procps 2:3.3.9-9+deb8u1 install ok installed readline-common readline-common 6.3-8 install ok installed sed sed 4.2.2-4+deb8u1 install ok installed sensible-utils sensible-utils 0.0.9+deb8u1 install ok installed startpar startpar 0.59-3 install ok installed systemd systemd 215-17+deb8u9 install ok installed systemd-sysv systemd-sysv 215-17+deb8u9 install ok installed sysv-rc sysv-rc 2.88dsf-59 install ok installed sysvinit sysvinit 2.88dsf-59 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59 install ok installed tar tar 1.27.1-2+deb8u2 install ok installed tzdata tzdata 2018i-0+deb8u1 install ok installed ucf ucf 3.0030 install ok installed udev udev 215-17+deb8u9 install ok installed util-linux util-linux 2.25.2-6 install ok installed xmds xmds 1.6.6-7 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2+b3 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-2+b1 0m38.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m39.0s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmphl1p9s', '-ac', '--ignore-obsolete'] 0m40.2s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmphl1p9s', '-ac', '--ignore-obsolete'] 0m40.2s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m40.3s DUMP: 0.15.1 0m40.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m40.3s INFO: Running adequate version 0.15.1 now. 0m40.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'xmds'] 0m40.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'xmds'] 0m40.4s INFO: Running scripts pre_remove 0m40.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m40.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m40.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m43.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m43.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_exceptions'] 0m43.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/pre_remove_exceptions'] 0m43.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', 'remove', 'fftw-dev', 'openmpi-common', 'libopenmpi-dev', 'libopenmpi1.6', 'libfftw3-bin', 'libgfortran3:amd64', 'libhwloc5:amd64', 'libquadmath0:amd64', 'libnuma-dev:amd64', 'libopenmpi1.3', 'libfftw3-3:amd64', 'libfftw3-single3:amd64', 'fftw2', 'libc6-dev:amd64', 'libdb5.1:amd64', 'libhwloc-dev:amd64', 'libibverbs1', 'mpi-default-dev', 'libltdl7:amd64', 'libfftw3-quad3:amd64', 'libibverbs-dev', 'libfftw3-dev:amd64', 'libtorque2', 'libfftw3-long3:amd64', 'libfftw3-double3:amd64', 'libltdl-dev:amd64', 'libgomp1:amd64', 'libcr0', 'libnuma1:amd64', 'libc-dev-bin', 'linux-libc-dev:amd64', 'xmds'] 0m44.1s DUMP: Reading package lists... Building dependency tree... Reading state information... Package 'libopenmpi1.3' is not installed, so not removed The following packages will be REMOVED: fftw-dev fftw2 libc-dev-bin libc6-dev libcr0 libdb5.1 libfftw3-3 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libgfortran3 libgomp1 libhwloc-dev libhwloc5 libibverbs-dev libibverbs1 libltdl-dev libltdl7 libnuma-dev libnuma1 libopenmpi-dev libopenmpi1.6 libquadmath0 libtorque2 linux-libc-dev mpi-default-dev openmpi-common xmds 0 upgraded, 0 newly installed, 31 to remove and 0 not upgraded. After this operation, 59.3 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10049 files and directories currently installed.) Removing xmds (1.6.6-7) ... Removing fftw-dev (2.1.5-1+b1) ... Removing fftw2 (2.1.5-1+b1) ... Removing mpi-default-dev (1.0.2+nmu2) ... Removing libopenmpi-dev (1.6.5-9.1+deb8u1) ... Removing libhwloc-dev:amd64 (1.10.0-3) ... Removing libnuma-dev:amd64 (2.0.10-1) ... Removing libc6-dev:amd64 (2.19-18+deb8u10) ... Removing libc-dev-bin (2.19-18+deb8u10) ... Removing libopenmpi1.6 (1.6.5-9.1+deb8u1) ... Removing libcr0 (0.8.5-2.2) ... Removing libdb5.1:amd64 (5.1.29-5) ... Removing libfftw3-3:amd64 (3.3.4-2) ... Removing libfftw3-dev:amd64 (3.3.4-2) ... Removing libfftw3-bin (3.3.4-2) ... Removing libfftw3-double3:amd64 (3.3.4-2) ... Removing libfftw3-long3:amd64 (3.3.4-2) ... Removing libfftw3-quad3:amd64 (3.3.4-2) ... Removing libfftw3-single3:amd64 (3.3.4-2) ... Removing libgfortran3:amd64 (4.9.2-10+deb8u2) ... Removing libgomp1:amd64 (4.9.2-10+deb8u2) ... Removing libhwloc5:amd64 (1.10.0-3) ... Removing libibverbs-dev (1.1.8-1.1) ... Removing libibverbs1 (1.1.8-1.1) ... Removing libltdl-dev:amd64 (2.4.2-1.11+b1) ... Removing libltdl7:amd64 (2.4.2-1.11+b1) ... Removing libnuma1:amd64 (2.0.10-1) ... Removing libquadmath0:amd64 (4.9.2-10+deb8u2) ... Removing libtorque2 (2.4.16+dfsg-1+deb7u4) ... Removing linux-libc-dev:amd64 (3.16.59-1) ... Removing openmpi-common (1.6.5-9.1+deb8u1) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... 0m44.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', 'remove', 'fftw-dev', 'openmpi-common', 'libopenmpi-dev', 'libopenmpi1.6', 'libfftw3-bin', 'libgfortran3:amd64', 'libhwloc5:amd64', 'libquadmath0:amd64', 'libnuma-dev:amd64', 'libopenmpi1.3', 'libfftw3-3:amd64', 'libfftw3-single3:amd64', 'fftw2', 'libc6-dev:amd64', 'libdb5.1:amd64', 'libhwloc-dev:amd64', 'libibverbs1', 'mpi-default-dev', 'libltdl7:amd64', 'libfftw3-quad3:amd64', 'libibverbs-dev', 'libfftw3-dev:amd64', 'libtorque2', 'libfftw3-long3:amd64', 'libfftw3-double3:amd64', 'libltdl-dev:amd64', 'libgomp1:amd64', 'libcr0', 'libnuma1:amd64', 'libc-dev-bin', 'linux-libc-dev:amd64', 'xmds'] 0m44.1s INFO: Running scripts post_remove 0m44.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_remove_exceptions'] 0m44.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_remove_exceptions'] 0m44.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg', '--purge', 'fftw-dev', 'openmpi-common', 'libopenmpi-dev', 'libopenmpi1.6', 'libfftw3-bin', 'libgfortran3:amd64', 'libhwloc5:amd64', 'libquadmath0:amd64', 'libnuma-dev:amd64', 'libopenmpi1.3', 'libfftw3-3:amd64', 'libfftw3-single3:amd64', 'fftw2', 'libc6-dev:amd64', 'libdb5.1:amd64', 'libhwloc-dev:amd64', 'libibverbs1', 'mpi-default-dev', 'libltdl7:amd64', 'libfftw3-quad3:amd64', 'libibverbs-dev', 'libfftw3-dev:amd64', 'libtorque2', 'libfftw3-long3:amd64', 'libfftw3-double3:amd64', 'libltdl-dev:amd64', 'libgomp1:amd64', 'libcr0', 'libnuma1:amd64', 'libc-dev-bin', 'linux-libc-dev:amd64'] 0m44.1s DUMP: dpkg: warning: ignoring request to remove fftw-dev which isn't installed dpkg: warning: ignoring request to remove openmpi-common which isn't installed dpkg: warning: ignoring request to remove libopenmpi-dev which isn't installed (Reading database ... 7523 files and directories currently installed.) Removing libopenmpi1.6 (1.6.5-9.1+deb8u1) ... Purging configuration files for libopenmpi1.6 (1.6.5-9.1+deb8u1) ... dpkg: warning: ignoring request to remove libfftw3-bin which isn't installed Removing libgfortran3:amd64 (4.9.2-10+deb8u2) ... Purging configuration files for libgfortran3:amd64 (4.9.2-10+deb8u2) ... Removing libhwloc5:amd64 (1.10.0-3) ... Purging configuration files for libhwloc5:amd64 (1.10.0-3) ... Removing libquadmath0:amd64 (4.9.2-10+deb8u2) ... Purging configuration files for libquadmath0:amd64 (4.9.2-10+deb8u2) ... dpkg: warning: ignoring request to remove libnuma-dev which isn't installed Removing libopenmpi1.3 (1.4.5-1) ... Purging configuration files for libopenmpi1.3 (1.4.5-1) ... dpkg: warning: ignoring request to remove libfftw3-3 which isn't installed Removing libfftw3-single3:amd64 (3.3.4-2) ... Purging configuration files for libfftw3-single3:amd64 (3.3.4-2) ... Removing fftw2 (2.1.5-1+b1) ... Purging configuration files for fftw2 (2.1.5-1+b1) ... dpkg: warning: ignoring request to remove libc6-dev which isn't installed Removing libdb5.1:amd64 (5.1.29-5) ... Purging configuration files for libdb5.1:amd64 (5.1.29-5) ... dpkg: warning: ignoring request to remove libhwloc-dev which isn't installed Removing libibverbs1 (1.1.8-1.1) ... Purging configuration files for libibverbs1 (1.1.8-1.1) ... dpkg: warning: ignoring request to remove mpi-default-dev which isn't installed Removing libltdl7:amd64 (2.4.2-1.11+b1) ... Purging configuration files for libltdl7:amd64 (2.4.2-1.11+b1) ... Removing libfftw3-quad3:amd64 (3.3.4-2) ... Purging configuration files for libfftw3-quad3:amd64 (3.3.4-2) ... dpkg: warning: ignoring request to remove libibverbs-dev which isn't installed dpkg: warning: ignoring request to remove libfftw3-dev which isn't installed Removing libtorque2 (2.4.16+dfsg-1+deb7u4) ... Purging configuration files for libtorque2 (2.4.16+dfsg-1+deb7u4) ... Removing libfftw3-long3:amd64 (3.3.4-2) ... Purging configuration files for libfftw3-long3:amd64 (3.3.4-2) ... Removing libfftw3-double3:amd64 (3.3.4-2) ... Purging configuration files for libfftw3-double3:amd64 (3.3.4-2) ... dpkg: warning: ignoring request to remove libltdl-dev which isn't installed Removing libgomp1:amd64 (4.9.2-10+deb8u2) ... Purging configuration files for libgomp1:amd64 (4.9.2-10+deb8u2) ... Removing libcr0 (0.8.5-2.2) ... Purging configuration files for libcr0 (0.8.5-2.2) ... Removing libnuma1:amd64 (2.0.10-1) ... Purging configuration files for libnuma1:amd64 (2.0.10-1) ... dpkg: warning: ignoring request to remove libc-dev-bin which isn't installed dpkg: warning: ignoring request to remove linux-libc-dev which isn't installed 0m44.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg', '--purge', 'fftw-dev', 'openmpi-common', 'libopenmpi-dev', 'libopenmpi1.6', 'libfftw3-bin', 'libgfortran3:amd64', 'libhwloc5:amd64', 'libquadmath0:amd64', 'libnuma-dev:amd64', 'libopenmpi1.3', 'libfftw3-3:amd64', 'libfftw3-single3:amd64', 'fftw2', 'libc6-dev:amd64', 'libdb5.1:amd64', 'libhwloc-dev:amd64', 'libibverbs1', 'mpi-default-dev', 'libltdl7:amd64', 'libfftw3-quad3:amd64', 'libibverbs-dev', 'libfftw3-dev:amd64', 'libtorque2', 'libfftw3-long3:amd64', 'libfftw3-double3:amd64', 'libltdl-dev:amd64', 'libgomp1:amd64', 'libcr0', 'libnuma1:amd64', 'libc-dev-bin', 'linux-libc-dev:amd64'] 0m44.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg', '--purge', 'xmds'] 0m44.1s DUMP: dpkg: warning: ignoring request to remove xmds which isn't installed 0m44.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg', '--purge', 'xmds'] 0m44.1s INFO: Running scripts post_purge 0m44.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_purge_exceptions'] 0m44.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_purge_exceptions'] 0m44.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg', '--purge', '--pending'] 0m44.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg', '--purge', '--pending'] 0m44.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg', '--remove', '--pending'] 0m44.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg', '--remove', '--pending'] 0m44.2s INFO: Running scripts post_test 0m44.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_test_exceptions'] 0m44.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'tmp/scripts/post_test_exceptions'] 0m44.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m44.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m44.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg-divert', '--list'] 0m44.7s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m44.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'dpkg-divert', '--list'] 0m44.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', 'clean'] 0m44.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphl1p9s', 'apt-get', 'clean'] 0m44.8s DEBUG: Recording chroot state 0m46.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/run/shm'] 0m46.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/run/shm'] 0m46.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/console'] 0m46.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/console'] 0m46.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/ptmx'] 0m46.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/ptmx'] 0m46.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/pts'] 0m46.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/dev/pts'] 0m46.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/proc'] 0m46.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphl1p9s/proc'] 0m46.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m46.7s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmphl1p9s'] 0m46.7s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmphl1p9s 0m46.8s INFO: PASS: Upgrading between Debian distributions. 0m46.8s INFO: PASS: All tests. 0m46.8s INFO: piuparts run ends. ret=0 End: 2019-02-04 00:59:46 UTC