Start: 2023-03-22 20:11:57 GMT [wheezy] Package: mcl Version: 1:12-068-1 Installed-Size: 3219 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.7) Suggests: mcl-doc Enhances: bioperl-run, blast2, ncbi-tools-bin Description: Markov Cluster algorithm Homepage: http://micans.org/mcl/ Description-md5: 5ade6456c0a34cadb40315ab8fedf0bb Tag: field::mathematics, implemented-in::c, role::program Section: math Priority: optional Filename: pool/main/m/mcl/mcl_12-068-1_amd64.deb Size: 1653212 MD5sum: 097f78e2965022d1ed37be3834deb882 SHA1: 027672b8b6477b662eba9c6204e072a1da7faed7 SHA256: a180980b2d83947cac691cb58450b02ffc763d80a9c16da45a2a48c0893886ce [jessie] Package: mcl Version: 1:14-137-1 Installed-Size: 3543 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.14) Suggests: mcl-doc Enhances: bioperl-run, blast2, ncbi-tools-bin Description: Markov Cluster algorithm Homepage: http://micans.org/mcl/ Description-md5: 5ade6456c0a34cadb40315ab8fedf0bb Tag: field::mathematics, implemented-in::c, role::program Section: math Priority: optional Filename: pool/main/m/mcl/mcl_14-137-1_amd64.deb Size: 574416 MD5sum: 4eda7f2c9173bad2ec5d4d3f4b3e6946 SHA1: 472ca5ae446b20df7b40cdf1322ec63a11378165 SHA256: 41cf22cfe5894bc1dcf694e28ad28051b62bb212bb9b26e8ae717d9c73bec720 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink -i /usr/lib/dbus-1.0/dbus-daemon-launch-helper --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie-rcmd/reference-chroot-metadata.dat --apt mcl=1:14-137-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink -i /usr/lib/dbus-1.0/dbus-daemon-launch-helper --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie-rcmd/reference-chroot-metadata.dat --apt mcl=1:14-137-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpg5a186yf 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpg5a186yf 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpg5a186yf', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpg5a186yf', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/proc'] 0m1.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/proc'] 0m1.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/pts'] 0m1.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/pts'] 0m1.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/ptmx'] 0m1.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/ptmx'] 0m1.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/console'] 0m1.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/console'] 0m1.2s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/run/shm'] 0m1.2s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/run/shm'] 0m1.2s DEBUG: sources.list: deb http://archive.debian.org/debian wheezy main 0m1.2s DEBUG: Created policy-rc.d and chmodded it. 0m1.2s DEBUG: Created resolv.conf. 0m1.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpg5a186yf/tmp/scripts/ 0m1.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts-jessie to /srv/piuparts.debian.org/tmp/tmpg5a186yf/tmp/scripts/ 0m1.2s INFO: Running scripts post_chroot_unpack 0m1.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg5a186yf', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.2s DUMP: Creating /etc/apt/apt.conf.d/unauthenticated-wheezy ... # The Release file is not getting updated. Acquire::Check-Valid-Until "false"; 0m1.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg5a186yf', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg5a186yf', 'apt-get', 'update'] 0m1.2s DUMP: E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m1.2s ERROR: Command failed (status=100): ['chroot', '/srv/piuparts.debian.org/tmp/tmpg5a186yf', 'apt-get', 'update'] E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m1.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/run/shm'] 0m1.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/run/shm'] 0m1.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/console'] 0m1.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/console'] 0m1.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/ptmx'] 0m1.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/ptmx'] 0m1.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/pts'] 0m1.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/dev/pts'] 0m1.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/proc'] 0m1.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg5a186yf/proc'] 0m1.5s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpg5a186yf'] 0m1.6s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpg5a186yf'] 0m1.6s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpg5a186yf 0m1.6s ERROR: piuparts run ends. ret=1 End: 2023-03-22 20:11:59 GMT