Start: 2023-03-22 20:08:41 GMT [wheezy] Package: readseq Version: 1-9 Installed-Size: 133 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.7), libncbi6 (>= 6.1.20030421) Description: Conversion between sequence formats Homepage: http://iubio.bio.indiana.edu/soft/molbio/readseq/ Description-md5: ea5b579d2401da971810ba00ea4b7cc8 Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::program, scope::utility, use::converting, works-with-format::plaintext, works-with::TODO Section: science Priority: optional Filename: pool/main/r/readseq/readseq_1-9_amd64.deb Size: 59526 MD5sum: 0be20852881d2208830636ca45745b76 SHA1: 81db346d51cf3d58d9c435c61f4d5356ed837a69 SHA256: 0cb0b97b2a15948519d4ff2b9f066454eb6c5ce3df83a4a426982b195842c78f [jessie] Package: readseq Version: 1-11 Installed-Size: 135 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libc6 (>= 2.14), libncbi6 (>= 6.1.20030421) Description: Conversion between sequence formats Homepage: http://iubio.bio.indiana.edu/soft/molbio/readseq/ Description-md5: ea5b579d2401da971810ba00ea4b7cc8 Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::program, scope::utility, use::converting, works-with-format::plaintext, works-with::TODO Section: science Priority: optional Filename: pool/main/r/readseq/readseq_1-11_amd64.deb Size: 54460 MD5sum: 28c8e1f7d9dabd9947ea2e9260d82c07 SHA1: 6c5d6d54b65da69abefd91a925e6d143e8481e1a SHA256: e7cae77c832652028bd3ab1761fe8e6772ea10bff6ed603d40cdd11f630d35b2 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink -i /usr/lib/dbus-1.0/dbus-daemon-launch-helper --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie-rcmd/reference-chroot-metadata.dat --apt readseq=1-11 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink -i /usr/lib/dbus-1.0/dbus-daemon-launch-helper --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie-rcmd/reference-chroot-metadata.dat --apt readseq=1-11 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmp0dewh265 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmp0dewh265 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp0dewh265', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.2s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmp0dewh265', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.2s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp0dewh265/proc'] 0m1.2s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmp0dewh265/proc'] 0m1.2s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/pts'] 0m1.2s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/pts'] 0m1.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/ptmx'] 0m1.2s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/ptmx'] 0m1.2s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/console'] 0m1.3s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/3', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/console'] 0m1.3s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp0dewh265/run/shm'] 0m1.3s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmp0dewh265/run/shm'] 0m1.3s DEBUG: sources.list: deb http://archive.debian.org/debian wheezy main 0m1.3s DEBUG: Created policy-rc.d and chmodded it. 0m1.3s DEBUG: Created resolv.conf. 0m1.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmp0dewh265/tmp/scripts/ 0m1.3s DEBUG: Copying scriptsdir /etc/piuparts/scripts-jessie to /srv/piuparts.debian.org/tmp/tmp0dewh265/tmp/scripts/ 0m1.3s INFO: Running scripts post_chroot_unpack 0m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0dewh265', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.3s DUMP: Creating /etc/apt/apt.conf.d/unauthenticated-wheezy ... # The Release file is not getting updated. Acquire::Check-Valid-Until "false"; 0m1.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0dewh265', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmp0dewh265', 'apt-get', 'update'] 0m1.3s DUMP: E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m1.3s ERROR: Command failed (status=100): ['chroot', '/srv/piuparts.debian.org/tmp/tmp0dewh265', 'apt-get', 'update'] E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m1.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/run/shm'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/run/shm'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/console'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/console'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/ptmx'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/ptmx'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/pts'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/dev/pts'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/proc'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmp0dewh265/proc'] 0m1.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp0dewh265'] 0m1.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmp0dewh265'] 0m1.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmp0dewh265 0m1.9s ERROR: piuparts run ends. ret=1 End: 2023-03-22 20:08:44 GMT