Start: 2019-04-17 22:54:58 UTC [wheezy] Package: embassy-domalign Version: 0.1.0+20110714-1 Installed-Size: 643 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (>= 6.4.0-1~), libc6 (>= 2.2.5), libx11-6, emboss-lib (<< 6.4.1~) Recommends: emboss Suggests: embassy Description: Extra EMBOSS commands for protein domain alignment Homepage: http://emboss.sourceforge.net/apps/cvs/embassy/index.html#DOMALIGN Description-md5: 4149429333c4c57628815096efc54167 Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::program, scope::utility, suite::TODO, use::analysing, use::comparing, use::editing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO Section: science Priority: optional Filename: pool/main/e/embassy-domalign/embassy-domalign_0.1.0+20110714-1_amd64.deb Size: 114198 MD5sum: 23571ec9bacfebeff0c2ad696072596a SHA1: 46b4e6b7a3ec30bb88bb6aaca55e7aba497e7392 SHA256: 3a74ec492565b896f12341319ab6eab9020c563e906266043ffa19b03a81f2d9 [jessie] Package: embassy-domalign Version: 0.1.650-1 Installed-Size: 638 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (>= 6.6.0-1~), libc6 (>= 2.2.5), libx11-6, emboss-lib (<< 6.6.1~) Recommends: emboss Suggests: embassy Description: Extra EMBOSS commands for protein domain alignment Homepage: http://emboss.sourceforge.net/apps/cvs/embassy/index.html#DOMALIGN Description-md5: 4149429333c4c57628815096efc54167 Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::program, scope::utility, suite::TODO, use::analysing, use::comparing, use::editing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO Section: science Priority: optional Filename: pool/main/e/embassy-domalign/embassy-domalign_0.1.650-1_amd64.deb Size: 66588 MD5sum: ebdb2b0295019fce3adbc26b8a721742 SHA1: 2e4647c315759ca91557a649a3e3f191510eaa89 SHA256: f38b910cd82b92cfb73b1f30a1b73d8b0efdfa66b45d7b1e5dcc5baf865469cf Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink -i /usr/lib/dbus-1.0/dbus-daemon-launch-helper --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -B reference-chroot-metadata.dat --apt embassy-domalign=0.1.650-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.99~201904111231~0.98-33-g659bba96 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --install-recommends --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink -i /usr/lib/dbus-1.0/dbus-daemon-launch-helper --mirror 'http://mirror.bm.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -B reference-chroot-metadata.dat --apt embassy-domalign=0.1.650-1 0m0.0s INFO: Running on: Linux piu-slave-bm-a 4.9.0-8-amd64 #1 SMP Debian 4.9.144-3.1 (2019-02-19) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpg552SV 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpg552SV 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpg552SV', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m2.1s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpg552SV', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m2.1s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpg552SV/proc'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpg552SV/proc'] 0m2.1s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/pts'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/pts'] 0m2.1s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/ptmx'] 0m2.1s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/ptmx'] 0m2.1s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/console'] 0m2.1s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/console'] 0m2.1s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpg552SV/run/shm'] 0m2.1s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpg552SV/run/shm'] 0m2.1s DEBUG: sources.list: deb http://archive.debian.org/debian wheezy main 0m2.2s DEBUG: Created policy-rc.d and chmodded it. 0m2.2s DEBUG: Created resolv.conf. 0m2.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpg552SV/tmp/scripts/ 0m2.2s DEBUG: Copying scriptsdir /etc/piuparts/scripts-jessie to /srv/piuparts.debian.org/tmp/tmpg552SV/tmp/scripts/ 0m2.2s INFO: Running scripts post_chroot_unpack 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.2s DUMP: Creating /etc/apt/apt.conf.d/unauthenticated-wheezy ... # The Release file is not getting updated. Acquire::Check-Valid-Until "false"; 0m2.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m2.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', 'update'] 0m6.3s DUMP: Get:1 http://archive.debian.org wheezy Release.gpg [2373 B] Get:2 http://archive.debian.org wheezy Release [191 kB] Get:3 http://archive.debian.org wheezy/main Translation-en [3846 kB] Get:4 http://archive.debian.org wheezy/main amd64 Packages [7634 kB] Fetched 11.7 MB in 2s (4372 kB/s) Reading package lists... 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', 'update'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-yf', 'dist-upgrade'] 0m6.9s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m6.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-yf', 'dist-upgrade'] 0m6.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.3s DUMP: 0c96df6df725ee7ec7aebd2b6a77fb72 - 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m7.3s INFO: Running scripts post_setup 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_dummy_users'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_dummy_users'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_experimental'] 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_experimental'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_forbid_home'] 0m9.0s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_forbid_home'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.0s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' `/bin/sync' -> `true' 0m9.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_force-unsafe-io'] 0m9.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_jessie-fake-essential'] 0m10.2s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... The following NEW packages will be installed: ucf 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 70.8 kB of archives. After this operation, 236 kB of additional disk space will be used. Get:1 http://archive.debian.org/debian/ wheezy/main ucf all 3.0025+nmu3 [70.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 70.8 kB in 0s (803 kB/s) Selecting previously unselected package ucf. (Reading database ... 6639 files and directories currently installed.) Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ... Moving old data out of the way Setting up ucf (3.0025+nmu3) ... 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_jessie-fake-essential'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_minimize'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_minimize'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_squeeze-backports'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_squeeze-backports'] 0m10.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_zz_backports'] 0m10.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_setup_zz_backports'] 0m10.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m10.3s DUMP: install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u3 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u7 install ok installed gpgv gpgv 1.4.12-7+deb7u7 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u10 install ok installed libc6:amd64 libc6 2.13-38+deb7u10 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed login login 1:4.1.5.1-1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u10 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1 install ok installed perl-base perl-base 5.14.2-21+deb7u3 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1 install ok installed tzdata tzdata 2016d-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m10.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m10.3s DEBUG: Loading chroot meta data from reference-chroot-metadata.dat 0m11.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 0m12.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 0m12.3s INFO: Running scripts is_testable 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/is_testable_uninstallable'] 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/is_testable_uninstallable'] 0m12.3s INFO: Running scripts pre_test 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_test_exceptions'] 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_test_exceptions'] 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_test_root_password'] 0m12.3s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m12.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_test_root_password'] 0m12.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'show', '--no-all-versions', 'embassy-domalign'] 0m12.4s DUMP: Package: embassy-domalign Version: 0.1.0+20110714-1 Installed-Size: 643 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (>= 6.4.0-1~), libc6 (>= 2.2.5), libx11-6, emboss-lib (<< 6.4.1~) Recommends: emboss Suggests: embassy Description-en: Extra EMBOSS commands for protein domain alignment The DOMALIGN programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress. . Applications in the current domalign release are allversusall (sequence similarity data from all-versus-all comparison), domainalign (generates alignments (DAF file) for nodes in a DCF file), domainrep (reorders DCF file to identify representative structures) and seqalign (extend alignments (DAF file) with sequences (DHF file)). Homepage: http://emboss.sourceforge.net/apps/cvs/embassy/index.html#DOMALIGN Description-md5: 4149429333c4c57628815096efc54167 Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::program, scope::utility, suite::TODO, use::analysing, use::comparing, use::editing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO Section: science Priority: optional Filename: pool/main/e/embassy-domalign/embassy-domalign_0.1.0+20110714-1_amd64.deb Size: 114198 MD5sum: 23571ec9bacfebeff0c2ad696072596a SHA1: 46b4e6b7a3ec30bb88bb6aaca55e7aba497e7392 SHA256: 3a74ec492565b896f12341319ab6eab9020c563e906266043ffa19b03a81f2d9 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'show', '--no-all-versions', 'embassy-domalign'] 0m12.4s INFO: apt-cache knows about the following packages: embassy-domalign 0m12.4s INFO: Running scripts pre_install 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_database-server'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_database-server'] 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_exceptions'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_exceptions'] 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_extras'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_extras'] 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture'] 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m12.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m12.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy'] 0m12.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://archive.debian.org/debian/ wheezy/main Translation-en 500 http://archive.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin archive.debian.org Pinned packages: 0m12.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy'] 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy', 'embassy-domalign'] 0m12.5s DUMP: embassy-domalign: Installed: (none) Candidate: 0.1.0+20110714-1 Version table: 0.1.0+20110714-1 0 500 http://archive.debian.org/debian/ wheezy/main amd64 Packages 0m12.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy', 'embassy-domalign'] 0m12.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-y', 'install', 'embassy-domalign'] 0m25.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: dialign emboss emboss-data emboss-lib krb5-locales libexpat1 libfreetype6 libgcrypt11 libgd2-noxpm libgnutls26 libgpg-error0 libgssapi-krb5-2 libhpdf-2.2.1 libjpeg8 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libmysqlclient18 libp11-kit0 libpng12-0 libpq5 libsasl2-2 libsasl2-modules libssl1.0.0 libtasn1-3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 mysql-common primer3 Suggested packages: embassy emboss-doc emboss-test clustalw rng-tools libgd-tools krb5-doc krb5-user libsasl2-modules-otp libsasl2-modules-ldap libsasl2-modules-sql libsasl2-modules-gssapi-mit libsasl2-modules-gssapi-heimdal ncbi-epcr The following NEW packages will be installed: dialign embassy-domalign emboss emboss-data emboss-lib krb5-locales libexpat1 libfreetype6 libgcrypt11 libgd2-noxpm libgnutls26 libgpg-error0 libgssapi-krb5-2 libhpdf-2.2.1 libjpeg8 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libmysqlclient18 libp11-kit0 libpng12-0 libpq5 libsasl2-2 libsasl2-modules libssl1.0.0 libtasn1-3 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 mysql-common primer3 0 upgraded, 35 newly installed, 0 to remove and 0 not upgraded. Need to get 52.2 MB of archives. After this operation, 355 MB of additional disk space will be used. Get:1 http://archive.debian.org/debian/ wheezy/main libssl1.0.0 amd64 1.0.1e-2+deb7u20 [1263 kB] Get:2 http://archive.debian.org/debian/ wheezy/main libgpg-error0 amd64 1.10-3.1 [77.9 kB] Get:3 http://archive.debian.org/debian/ wheezy/main libgcrypt11 amd64 1.5.0-5+deb7u4 [301 kB] Get:4 http://archive.debian.org/debian/ wheezy/main libp11-kit0 amd64 0.12-3 [52.8 kB] Get:5 http://archive.debian.org/debian/ wheezy/main libtasn1-3 amd64 2.13-2+deb7u2 [67.8 kB] Get:6 http://archive.debian.org/debian/ wheezy/main libgnutls26 amd64 2.12.20-8+deb7u5 [620 kB] Get:7 http://archive.debian.org/debian/ wheezy/main libkeyutils1 amd64 1.5.5-3+deb7u1 [8664 B] Get:8 http://archive.debian.org/debian/ wheezy/main libkrb5support0 amd64 1.10.1+dfsg-5+deb7u7 [50.5 kB] Get:9 http://archive.debian.org/debian/ wheezy/main libk5crypto3 amd64 1.10.1+dfsg-5+deb7u7 [113 kB] Get:10 http://archive.debian.org/debian/ wheezy/main libkrb5-3 amd64 1.10.1+dfsg-5+deb7u7 [394 kB] Get:11 http://archive.debian.org/debian/ wheezy/main libgssapi-krb5-2 amd64 1.10.1+dfsg-5+deb7u7 [150 kB] Get:12 http://archive.debian.org/debian/ wheezy/main libsasl2-2 amd64 2.1.25.dfsg1-6+deb7u1 [120 kB] Get:13 http://archive.debian.org/debian/ wheezy/main libldap-2.4-2 amd64 2.4.31-2+deb7u2 [243 kB] Get:14 http://archive.debian.org/debian/ wheezy/main libexpat1 amd64 2.1.0-1+deb7u2 [139 kB] Get:15 http://archive.debian.org/debian/ wheezy/main libfreetype6 amd64 2.4.9-1.1+deb7u3 [452 kB] Get:16 http://archive.debian.org/debian/ wheezy/main libjpeg8 amd64 8d-1+deb7u1 [138 kB] Get:17 http://archive.debian.org/debian/ wheezy/main libpng12-0 amd64 1.2.49-1+deb7u2 [191 kB] Get:18 http://archive.debian.org/debian/ wheezy/main libgd2-noxpm amd64 2.0.36~rc1~dfsg-6.1+deb7u2 [231 kB] Get:19 http://archive.debian.org/debian/ wheezy/main mysql-common all 5.5.47-0+deb7u1 [81.9 kB] Get:20 http://archive.debian.org/debian/ wheezy/main libmysqlclient18 amd64 5.5.47-0+deb7u1 [686 kB] Get:21 http://archive.debian.org/debian/ wheezy/main libxau6 amd64 1:1.0.7-1 [18.8 kB] Get:22 http://archive.debian.org/debian/ wheezy/main libxdmcp6 amd64 1:1.1.1-1 [26.3 kB] Get:23 http://archive.debian.org/debian/ wheezy/main libxcb1 amd64 1.8.1-2+deb7u1 [50.2 kB] Get:24 http://archive.debian.org/debian/ wheezy/main libx11-data all 2:1.5.0-1+deb7u2 [194 kB] Get:25 http://archive.debian.org/debian/ wheezy/main libx11-6 amd64 2:1.5.0-1+deb7u2 [901 kB] Get:26 http://archive.debian.org/debian/ wheezy/main krb5-locales all 1.10.1+dfsg-5+deb7u7 [1504 kB] Get:27 http://archive.debian.org/debian/ wheezy/main dialign amd64 2.2.1-5 [205 kB] Get:28 http://archive.debian.org/debian/ wheezy/main libhpdf-2.2.1 amd64 2.2.1-1 [504 kB] Get:29 http://archive.debian.org/debian/ wheezy/main libpq5 amd64 9.1.21-0+deb7u1 [140 kB] Get:30 http://archive.debian.org/debian/ wheezy/main emboss-lib amd64 6.4.0-2 [2823 kB] Get:31 http://archive.debian.org/debian/ wheezy/main embassy-domalign amd64 0.1.0+20110714-1 [114 kB] Get:32 http://archive.debian.org/debian/ wheezy/main emboss-data all 6.4.0-2 [39.0 MB] Get:33 http://archive.debian.org/debian/ wheezy/main emboss amd64 6.4.0-2 [1009 kB] Get:34 http://archive.debian.org/debian/ wheezy/main libsasl2-modules amd64 2.1.25.dfsg1-6+deb7u1 [116 kB] Get:35 http://archive.debian.org/debian/ wheezy/main primer3 amd64 2.2.3-1 [189 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 52.2 MB in 2s (18.1 MB/s) Selecting previously unselected package libssl1.0.0:amd64. (Reading database ... 6657 files and directories currently installed.) Unpacking libssl1.0.0:amd64 (from .../libssl1.0.0_1.0.1e-2+deb7u20_amd64.deb) ... Selecting previously unselected package libgpg-error0:amd64. Unpacking libgpg-error0:amd64 (from .../libgpg-error0_1.10-3.1_amd64.deb) ... Selecting previously unselected package libgcrypt11:amd64. Unpacking libgcrypt11:amd64 (from .../libgcrypt11_1.5.0-5+deb7u4_amd64.deb) ... Selecting previously unselected package libp11-kit0:amd64. Unpacking libp11-kit0:amd64 (from .../libp11-kit0_0.12-3_amd64.deb) ... Selecting previously unselected package libtasn1-3:amd64. Unpacking libtasn1-3:amd64 (from .../libtasn1-3_2.13-2+deb7u2_amd64.deb) ... Selecting previously unselected package libgnutls26:amd64. Unpacking libgnutls26:amd64 (from .../libgnutls26_2.12.20-8+deb7u5_amd64.deb) ... Selecting previously unselected package libkeyutils1:amd64. Unpacking libkeyutils1:amd64 (from .../libkeyutils1_1.5.5-3+deb7u1_amd64.deb) ... Selecting previously unselected package libkrb5support0:amd64. Unpacking libkrb5support0:amd64 (from .../libkrb5support0_1.10.1+dfsg-5+deb7u7_amd64.deb) ... Selecting previously unselected package libk5crypto3:amd64. Unpacking libk5crypto3:amd64 (from .../libk5crypto3_1.10.1+dfsg-5+deb7u7_amd64.deb) ... Selecting previously unselected package libkrb5-3:amd64. Unpacking libkrb5-3:amd64 (from .../libkrb5-3_1.10.1+dfsg-5+deb7u7_amd64.deb) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Unpacking libgssapi-krb5-2:amd64 (from .../libgssapi-krb5-2_1.10.1+dfsg-5+deb7u7_amd64.deb) ... Selecting previously unselected package libsasl2-2:amd64. Unpacking libsasl2-2:amd64 (from .../libsasl2-2_2.1.25.dfsg1-6+deb7u1_amd64.deb) ... Selecting previously unselected package libldap-2.4-2:amd64. Unpacking libldap-2.4-2:amd64 (from .../libldap-2.4-2_2.4.31-2+deb7u2_amd64.deb) ... Selecting previously unselected package libexpat1:amd64. Unpacking libexpat1:amd64 (from .../libexpat1_2.1.0-1+deb7u2_amd64.deb) ... Selecting previously unselected package libfreetype6:amd64. Unpacking libfreetype6:amd64 (from .../libfreetype6_2.4.9-1.1+deb7u3_amd64.deb) ... Selecting previously unselected package libjpeg8:amd64. Unpacking libjpeg8:amd64 (from .../libjpeg8_8d-1+deb7u1_amd64.deb) ... Selecting previously unselected package libpng12-0:amd64. Unpacking libpng12-0:amd64 (from .../libpng12-0_1.2.49-1+deb7u2_amd64.deb) ... Selecting previously unselected package libgd2-noxpm:amd64. Unpacking libgd2-noxpm:amd64 (from .../libgd2-noxpm_2.0.36~rc1~dfsg-6.1+deb7u2_amd64.deb) ... Selecting previously unselected package mysql-common. Unpacking mysql-common (from .../mysql-common_5.5.47-0+deb7u1_all.deb) ... Selecting previously unselected package libmysqlclient18:amd64. Unpacking libmysqlclient18:amd64 (from .../libmysqlclient18_5.5.47-0+deb7u1_amd64.deb) ... Selecting previously unselected package libxau6:amd64. Unpacking libxau6:amd64 (from .../libxau6_1%3a1.0.7-1_amd64.deb) ... Selecting previously unselected package libxdmcp6:amd64. Unpacking libxdmcp6:amd64 (from .../libxdmcp6_1%3a1.1.1-1_amd64.deb) ... Selecting previously unselected package libxcb1:amd64. Unpacking libxcb1:amd64 (from .../libxcb1_1.8.1-2+deb7u1_amd64.deb) ... Selecting previously unselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1+deb7u2_all.deb) ... Selecting previously unselected package libx11-6:amd64. Unpacking libx11-6:amd64 (from .../libx11-6_2%3a1.5.0-1+deb7u2_amd64.deb) ... Selecting previously unselected package krb5-locales. Unpacking krb5-locales (from .../krb5-locales_1.10.1+dfsg-5+deb7u7_all.deb) ... Selecting previously unselected package dialign. Unpacking dialign (from .../dialign_2.2.1-5_amd64.deb) ... Selecting previously unselected package libhpdf-2.2.1. Unpacking libhpdf-2.2.1 (from .../libhpdf-2.2.1_2.2.1-1_amd64.deb) ... Selecting previously unselected package libpq5. Unpacking libpq5 (from .../libpq5_9.1.21-0+deb7u1_amd64.deb) ... Selecting previously unselected package emboss-lib. Unpacking emboss-lib (from .../emboss-lib_6.4.0-2_amd64.deb) ... Selecting previously unselected package embassy-domalign. Unpacking embassy-domalign (from .../embassy-domalign_0.1.0+20110714-1_amd64.deb) ... Selecting previously unselected package emboss-data. Unpacking emboss-data (from .../emboss-data_6.4.0-2_all.deb) ... Selecting previously unselected package emboss. Unpacking emboss (from .../emboss_6.4.0-2_amd64.deb) ... Selecting previously unselected package libsasl2-modules:amd64. Unpacking libsasl2-modules:amd64 (from .../libsasl2-modules_2.1.25.dfsg1-6+deb7u1_amd64.deb) ... Selecting previously unselected package primer3. Unpacking primer3 (from .../primer3_2.2.3-1_amd64.deb) ... Setting up libssl1.0.0:amd64 (1.0.1e-2+deb7u20) ... Setting up libgpg-error0:amd64 (1.10-3.1) ... Setting up libgcrypt11:amd64 (1.5.0-5+deb7u4) ... Setting up libp11-kit0:amd64 (0.12-3) ... Setting up libtasn1-3:amd64 (2.13-2+deb7u2) ... Setting up libgnutls26:amd64 (2.12.20-8+deb7u5) ... Setting up libkeyutils1:amd64 (1.5.5-3+deb7u1) ... Setting up libkrb5support0:amd64 (1.10.1+dfsg-5+deb7u7) ... Setting up libk5crypto3:amd64 (1.10.1+dfsg-5+deb7u7) ... Setting up libkrb5-3:amd64 (1.10.1+dfsg-5+deb7u7) ... Setting up libgssapi-krb5-2:amd64 (1.10.1+dfsg-5+deb7u7) ... Setting up libsasl2-2:amd64 (2.1.25.dfsg1-6+deb7u1) ... Setting up libldap-2.4-2:amd64 (2.4.31-2+deb7u2) ... Setting up libexpat1:amd64 (2.1.0-1+deb7u2) ... Setting up libfreetype6:amd64 (2.4.9-1.1+deb7u3) ... Setting up libjpeg8:amd64 (8d-1+deb7u1) ... Setting up libpng12-0:amd64 (1.2.49-1+deb7u2) ... Setting up libgd2-noxpm:amd64 (2.0.36~rc1~dfsg-6.1+deb7u2) ... Setting up mysql-common (5.5.47-0+deb7u1) ... Setting up libmysqlclient18:amd64 (5.5.47-0+deb7u1) ... Setting up libxau6:amd64 (1:1.0.7-1) ... Setting up libxdmcp6:amd64 (1:1.1.1-1) ... Setting up libxcb1:amd64 (1.8.1-2+deb7u1) ... Setting up libx11-data (2:1.5.0-1+deb7u2) ... Setting up libx11-6:amd64 (2:1.5.0-1+deb7u2) ... Setting up krb5-locales (1.10.1+dfsg-5+deb7u7) ... Setting up dialign (2.2.1-5) ... Setting up libhpdf-2.2.1 (2.2.1-1) ... Setting up libpq5 (9.1.21-0+deb7u1) ... Setting up emboss-lib (6.4.0-2) ... Setting up embassy-domalign (0.1.0+20110714-1) ... Setting up emboss-data (6.4.0-2) ... Setting up emboss (6.4.0-2) ... Setting up libsasl2-modules:amd64 (2.1.25.dfsg1-6+deb7u1) ... Setting up primer3 (2.2.3-1) ... 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-y', 'install', 'embassy-domalign'] 0m25.5s INFO: Running scripts post_install 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_install_exceptions'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_install_exceptions'] 0m25.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 0m26.9s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 0m26.9s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpg552SV to jessie 0m26.9s DEBUG: sources.list: deb http://mirror.bm.debian.org/debian/ jessie main 0m26.9s INFO: Running scripts pre_distupgrade 0m26.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m26.9s DUMP: removed `/etc/apt/apt.conf.d/unauthenticated-wheezy' 0m26.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m26.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_exceptions'] 0m26.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_exceptions'] 0m26.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m26.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m26.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m27.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m27.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m27.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', 'update'] 0m31.5s DUMP: Get:1 http://mirror.bm.debian.org jessie Release.gpg [2420 B] Get:2 http://mirror.bm.debian.org jessie Release [148 kB] Get:3 http://mirror.bm.debian.org jessie/main amd64 Packages [6818 kB] Get:4 http://mirror.bm.debian.org jessie/main Translation-en [4581 kB] Fetched 11.5 MB in 2s (4404 kB/s) Reading package lists... 0m31.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', 'update'] 0m31.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-yf', 'dist-upgrade'] 1m14.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: gcc-4.7-base The following NEW packages will be installed: acl adduser dbus dmsetup fontconfig-config fonts-dejavu-core gcc-4.9-base init libaudit-common libaudit1 libcap-ng0 libcap2 libcap2-bin libcryptsetup4 libdb5.3 libdbus-1-3 libdebconfclient0 libdevmapper1.02.1 libffi6 libfontconfig1 libgcrypt20 libgd3 libgmp10 libgnutls-deb0-28 libgpm2 libhogweed2 libjbig0 libjpeg62-turbo libkmod2 libncursesw5 libnettle4 libpam-cap libpam-systemd libpcre3 libprocps3 libsasl2-modules-db libsmartcols1 libsystemd0 libtasn1-6 libtiff5 libudev1 libvpx1 libxpm4 procps psmisc startpar systemd systemd-sysv udev The following packages will be upgraded: apt base-files base-passwd bash bsdutils coreutils dash debconf debconf-i18n debian-archive-keyring debianutils dialign diffutils dpkg e2fslibs e2fsprogs embassy-domalign emboss emboss-data emboss-lib findutils gnupg gpgv grep gzip hostname initscripts krb5-locales libacl1 libapt-pkg4.12 libattr1 libblkid1 libbz2-1.0 libc-bin libc6 libcomerr2 libexpat1 libfreetype6 libgcc1 libgpg-error0 libgssapi-krb5-2 libhpdf-2.2.1 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 liblocale-gettext-perl liblzma5 libmount1 libmysqlclient18 libncurses5 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpng12-0 libpq5 libreadline6 libsasl2-2 libsasl2-modules libselinux1 libsemanage-common libsemanage1 libsepol1 libslang2 libss2 libssl1.0.0 libstdc++6 libtext-charwidth-perl libtext-iconv-perl libtinfo5 libusb-0.1-4 libustr-1.0-1 libuuid1 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 login lsb-base mount multiarch-support mysql-common ncurses-base ncurses-bin passwd perl-base primer3 readline-common sed sensible-utils sysv-rc sysvinit sysvinit-utils tar tzdata ucf util-linux xz-utils zlib1g 103 upgraded, 49 newly installed, 1 to remove and 0 not upgraded. Need to get 114 MB of archives. After this operation, 207 MB of additional disk space will be used. Get:1 http://mirror.bm.debian.org/debian/ jessie/main libc6 amd64 2.19-18+deb8u10 [4665 kB] Get:2 http://mirror.bm.debian.org/debian/ jessie/main libc-bin amd64 2.19-18+deb8u10 [1281 kB] Get:3 http://mirror.bm.debian.org/debian/ jessie/main gcc-4.9-base amd64 4.9.2-10+deb8u1 [160 kB] Get:4 http://mirror.bm.debian.org/debian/ jessie/main libstdc++6 amd64 4.9.2-10+deb8u1 [273 kB] Get:5 http://mirror.bm.debian.org/debian/ jessie/main libgcc1 amd64 1:4.9.2-10+deb8u1 [39.5 kB] Get:6 http://mirror.bm.debian.org/debian/ jessie/main base-files amd64 8+deb8u11 [78.2 kB] Get:7 http://mirror.bm.debian.org/debian/ jessie/main sensible-utils all 0.0.9+deb8u1 [10.9 kB] Get:8 http://mirror.bm.debian.org/debian/ jessie/main debianutils amd64 4.4+b1 [99.1 kB] Get:9 http://mirror.bm.debian.org/debian/ jessie/main bash amd64 4.3-11+deb8u1 [1172 kB] Get:10 http://mirror.bm.debian.org/debian/ jessie/main libgpg-error0 amd64 1.17-3 [94.9 kB] Get:11 http://mirror.bm.debian.org/debian/ jessie/main libgcrypt20 amd64 1.6.3-2+deb8u4 [392 kB] Get:12 http://mirror.bm.debian.org/debian/ jessie/main libsystemd0 amd64 215-17+deb8u7 [89.4 kB] Get:13 http://mirror.bm.debian.org/debian/ jessie/main bsdutils amd64 1:2.25.2-6 [94.0 kB] Get:14 http://mirror.bm.debian.org/debian/ jessie/main libpcre3 amd64 2:8.35-3.3+deb8u4 [322 kB] Get:15 http://mirror.bm.debian.org/debian/ jessie/main libselinux1 amd64 2.3-2 [89.8 kB] Get:16 http://mirror.bm.debian.org/debian/ jessie/main coreutils amd64 8.23-4 [2727 kB] Get:17 http://mirror.bm.debian.org/debian/ jessie/main dpkg amd64 1.17.27 [2994 kB] Get:18 http://mirror.bm.debian.org/debian/ jessie/main dash amd64 0.5.7-4+b1 [109 kB] Get:19 http://mirror.bm.debian.org/debian/ jessie/main diffutils amd64 1:3.3-1+b1 [267 kB] Get:20 http://mirror.bm.debian.org/debian/ jessie/main e2fslibs amd64 1.42.12-2+b1 [186 kB] Get:21 http://mirror.bm.debian.org/debian/ jessie/main e2fsprogs amd64 1.42.12-2+b1 [750 kB] Get:22 http://mirror.bm.debian.org/debian/ jessie/main findutils amd64 4.4.2-9+b1 [485 kB] Get:23 http://mirror.bm.debian.org/debian/ jessie/main grep amd64 2.20-4.1 [325 kB] Get:24 http://mirror.bm.debian.org/debian/ jessie/main gzip amd64 1.6-4 [111 kB] Get:25 http://mirror.bm.debian.org/debian/ jessie/main hostname amd64 3.15 [13.9 kB] Get:26 http://mirror.bm.debian.org/debian/ jessie/main libaudit-common all 1:2.4-1 [13.5 kB] Get:27 http://mirror.bm.debian.org/debian/ jessie/main libaudit1 amd64 1:2.4-1+b1 [44.7 kB] Get:28 http://mirror.bm.debian.org/debian/ jessie/main libattr1 amd64 1:2.4.47-2 [18.3 kB] Get:29 http://mirror.bm.debian.org/debian/ jessie/main libcap2 amd64 1:2.24-8 [15.3 kB] Get:30 http://mirror.bm.debian.org/debian/ jessie/main libudev1 amd64 215-17+deb8u7 [57.8 kB] Get:31 http://mirror.bm.debian.org/debian/ jessie/main libtext-charwidth-perl amd64 0.04-7+b3 [10.7 kB] Get:32 http://mirror.bm.debian.org/debian/ jessie/main libtext-iconv-perl amd64 1.7-5+b2 [16.2 kB] Get:33 http://mirror.bm.debian.org/debian/ jessie/main perl-base amd64 5.20.2-3+deb8u11 [1230 kB] Get:34 http://mirror.bm.debian.org/debian/ jessie/main liblocale-gettext-perl amd64 1.05-8+b1 [19.0 kB] Get:35 http://mirror.bm.debian.org/debian/ jessie/main debconf all 1.5.56+deb8u1 [167 kB] Get:36 http://mirror.bm.debian.org/debian/ jessie/main libpam0g amd64 1.1.8-3.1+deb8u2+b1 [126 kB] Get:37 http://mirror.bm.debian.org/debian/ jessie/main libsemanage-common all 2.3-1 [24.6 kB] Get:38 http://mirror.bm.debian.org/debian/ jessie/main libsemanage1 amd64 2.3-1+b1 [90.2 kB] Get:39 http://mirror.bm.debian.org/debian/ jessie/main libbz2-1.0 amd64 1.0.6-7+b3 [43.5 kB] Get:40 http://mirror.bm.debian.org/debian/ jessie/main libsepol1 amd64 2.3-2 [127 kB] Get:41 http://mirror.bm.debian.org/debian/ jessie/main libustr-1.0-1 amd64 1.0.4-3+b2 [79.6 kB] Get:42 http://mirror.bm.debian.org/debian/ jessie/main libdb5.3 amd64 5.3.28-9+deb8u1 [680 kB] Get:43 http://mirror.bm.debian.org/debian/ jessie/main libpam-modules-bin amd64 1.1.8-3.1+deb8u2+b1 [104 kB] Get:44 http://mirror.bm.debian.org/debian/ jessie/main libpam-modules amd64 1.1.8-3.1+deb8u2+b1 [307 kB] Get:45 http://mirror.bm.debian.org/debian/ jessie/main passwd amd64 1:4.2-3+deb8u4 [971 kB] Get:46 http://mirror.bm.debian.org/debian/ jessie/main libuuid1 amd64 2.25.2-6 [64.7 kB] Get:47 http://mirror.bm.debian.org/debian/ jessie/main libblkid1 amd64 2.25.2-6 [156 kB] Get:48 http://mirror.bm.debian.org/debian/ jessie/main libmount1 amd64 2.25.2-6 [164 kB] Get:49 http://mirror.bm.debian.org/debian/ jessie/main libsmartcols1 amd64 2.25.2-6 [110 kB] Get:50 http://mirror.bm.debian.org/debian/ jessie/main startpar amd64 0.59-3 [21.8 kB] Get:51 http://mirror.bm.debian.org/debian/ jessie/main sysvinit-utils amd64 2.88dsf-59 [84.4 kB] Get:52 http://mirror.bm.debian.org/debian/ jessie/main sysv-rc all 2.88dsf-59 [82.8 kB] Get:53 http://mirror.bm.debian.org/debian/ jessie/main mount amd64 2.25.2-6 [168 kB] Get:54 http://mirror.bm.debian.org/debian/ jessie/main lsb-base all 4.1+Debian13+nmu1 [26.7 kB] Get:55 http://mirror.bm.debian.org/debian/ jessie/main initscripts amd64 2.88dsf-59 [87.2 kB] Get:56 http://mirror.bm.debian.org/debian/ jessie/main tzdata all 2018e-0+deb8u1 [233 kB] Get:57 http://mirror.bm.debian.org/debian/ jessie/main util-linux amd64 2.25.2-6 [845 kB] Get:58 http://mirror.bm.debian.org/debian/ jessie/main libdevmapper1.02.1 amd64 2:1.02.90-2.2+deb8u1 [145 kB] Get:59 http://mirror.bm.debian.org/debian/ jessie/main dmsetup amd64 2:1.02.90-2.2+deb8u1 [69.1 kB] Get:60 http://mirror.bm.debian.org/debian/ jessie/main libcryptsetup4 amd64 2:1.6.6-5 [103 kB] Get:61 http://mirror.bm.debian.org/debian/ jessie/main libkmod2 amd64 18-3 [46.2 kB] Get:62 http://mirror.bm.debian.org/debian/ jessie/main adduser all 3.113+nmu3 [264 kB] Get:63 http://mirror.bm.debian.org/debian/ jessie/main libtinfo5 amd64 5.9+20140913-1+deb8u3 [282 kB] Get:64 http://mirror.bm.debian.org/debian/ jessie/main libncurses5 amd64 5.9+20140913-1+deb8u3 [96.6 kB] Get:65 http://mirror.bm.debian.org/debian/ jessie/main libncursesw5 amd64 5.9+20140913-1+deb8u3 [123 kB] Get:66 http://mirror.bm.debian.org/debian/ jessie/main libprocps3 amd64 2:3.3.9-9+deb8u1 [56.7 kB] Get:67 http://mirror.bm.debian.org/debian/ jessie/main procps amd64 2:3.3.9-9+deb8u1 [236 kB] Get:68 http://mirror.bm.debian.org/debian/ jessie/main libacl1 amd64 2.2.52-2 [27.9 kB] Get:69 http://mirror.bm.debian.org/debian/ jessie/main udev amd64 215-17+deb8u7 [876 kB] Get:70 http://mirror.bm.debian.org/debian/ jessie/main acl amd64 2.2.52-2 [58.4 kB] Get:71 http://mirror.bm.debian.org/debian/ jessie/main libcap2-bin amd64 1:2.24-8 [25.4 kB] Get:72 http://mirror.bm.debian.org/debian/ jessie/main systemd amd64 215-17+deb8u7 [2545 kB] Get:73 http://mirror.bm.debian.org/debian/ jessie/main systemd-sysv amd64 215-17+deb8u7 [36.7 kB] Get:74 http://mirror.bm.debian.org/debian/ jessie/main init amd64 1.22 [4674 B] Get:75 http://mirror.bm.debian.org/debian/ jessie/main login amd64 1:4.2-3+deb8u4 [722 kB] Get:76 http://mirror.bm.debian.org/debian/ jessie/main ncurses-bin amd64 5.9+20140913-1+deb8u3 [347 kB] Get:77 http://mirror.bm.debian.org/debian/ jessie/main sed amd64 4.2.2-4+deb8u1 [243 kB] Get:78 http://mirror.bm.debian.org/debian/ jessie/main tar amd64 1.27.1-2+deb8u1 [676 kB] Get:79 http://mirror.bm.debian.org/debian/ jessie/main sysvinit amd64 2.88dsf-59 [99.9 kB] Get:80 http://mirror.bm.debian.org/debian/ jessie/main liblzma5 amd64 5.1.1alpha+20120614-2+b3 [194 kB] Get:81 http://mirror.bm.debian.org/debian/ jessie/main zlib1g amd64 1:1.2.8.dfsg-2+b1 [88.8 kB] Get:82 http://mirror.bm.debian.org/debian/ jessie/main libapt-pkg4.12 amd64 1.0.9.8.4 [792 kB] Get:83 http://mirror.bm.debian.org/debian/ jessie/main gpgv amd64 1.4.18-7+deb8u5 [209 kB] Get:84 http://mirror.bm.debian.org/debian/ jessie/main debian-archive-keyring all 2017.5~deb8u1 [56.7 kB] Get:85 http://mirror.bm.debian.org/debian/ jessie/main readline-common all 6.3-8 [57.7 kB] Get:86 http://mirror.bm.debian.org/debian/ jessie/main libreadline6 amd64 6.3-8+b3 [143 kB] Get:87 http://mirror.bm.debian.org/debian/ jessie/main libusb-0.1-4 amd64 2:0.1.12-25 [21.9 kB] Get:88 http://mirror.bm.debian.org/debian/ jessie/main gnupg amd64 1.4.18-7+deb8u5 [1150 kB] Get:89 http://mirror.bm.debian.org/debian/ jessie/main apt amd64 1.0.9.8.4 [1109 kB] Get:90 http://mirror.bm.debian.org/debian/ jessie/main libdebconfclient0 amd64 0.192 [46.2 kB] Get:91 http://mirror.bm.debian.org/debian/ jessie/main base-passwd amd64 3.5.37 [64.5 kB] Get:92 http://mirror.bm.debian.org/debian/ jessie/main ncurses-base all 5.9+20140913-1+deb8u3 [222 kB] Get:93 http://mirror.bm.debian.org/debian/ jessie/main libslang2 amd64 2.3.0-2 [491 kB] Get:94 http://mirror.bm.debian.org/debian/ jessie/main libcomerr2 amd64 1.42.12-2+b1 [60.7 kB] Get:95 http://mirror.bm.debian.org/debian/ jessie/main libss2 amd64 1.42.12-2+b1 [65.0 kB] Get:96 http://mirror.bm.debian.org/debian/ jessie/main libssl1.0.0 amd64 1.0.1t-1+deb8u8 [1044 kB] Get:97 http://mirror.bm.debian.org/debian/ jessie/main libgmp10 amd64 2:6.0.0+dfsg-6 [253 kB] Get:98 http://mirror.bm.debian.org/debian/ jessie/main libnettle4 amd64 2.7.1-5+deb8u2 [176 kB] Get:99 http://mirror.bm.debian.org/debian/ jessie/main libhogweed2 amd64 2.7.1-5+deb8u2 [125 kB] Get:100 http://mirror.bm.debian.org/debian/ jessie/main libffi6 amd64 3.1-2+deb8u1 [20.2 kB] Get:101 http://mirror.bm.debian.org/debian/ jessie/main libp11-kit0 amd64 0.20.7-1 [81.2 kB] Get:102 http://mirror.bm.debian.org/debian/ jessie/main libtasn1-6 amd64 4.2-3+deb8u3 [49.2 kB] Get:103 http://mirror.bm.debian.org/debian/ jessie/main libgnutls-deb0-28 amd64 3.3.8-6+deb8u7 [696 kB] Get:104 http://mirror.bm.debian.org/debian/ jessie/main libgpm2 amd64 1.20.4-6.1+b2 [34.0 kB] Get:105 http://mirror.bm.debian.org/debian/ jessie/main libkeyutils1 amd64 1.5.9-5+b1 [12.0 kB] Get:106 http://mirror.bm.debian.org/debian/ jessie/main libk5crypto3 amd64 1.12.1+dfsg-19+deb8u4 [116 kB] Get:107 http://mirror.bm.debian.org/debian/ jessie/main libgssapi-krb5-2 amd64 1.12.1+dfsg-19+deb8u4 [152 kB] Get:108 http://mirror.bm.debian.org/debian/ jessie/main libkrb5-3 amd64 1.12.1+dfsg-19+deb8u4 [303 kB] Get:109 http://mirror.bm.debian.org/debian/ jessie/main libkrb5support0 amd64 1.12.1+dfsg-19+deb8u4 [59.4 kB] Get:110 http://mirror.bm.debian.org/debian/ jessie/main libsasl2-modules amd64 2.1.26.dfsg1-13+deb8u1 [101 kB] Get:111 http://mirror.bm.debian.org/debian/ jessie/main libsasl2-2 amd64 2.1.26.dfsg1-13+deb8u1 [105 kB] Get:112 http://mirror.bm.debian.org/debian/ jessie/main libsasl2-modules-db amd64 2.1.26.dfsg1-13+deb8u1 [67.1 kB] Get:113 http://mirror.bm.debian.org/debian/ jessie/main libldap-2.4-2 amd64 2.4.40+dfsg-1+deb8u4 [218 kB] Get:114 http://mirror.bm.debian.org/debian/ jessie/main libcap-ng0 amd64 0.7.4-2 [13.2 kB] Get:115 http://mirror.bm.debian.org/debian/ jessie/main libdbus-1-3 amd64 1.8.22-0+deb8u1 [170 kB] Get:116 http://mirror.bm.debian.org/debian/ jessie/main libexpat1 amd64 2.1.0-6+deb8u4 [80.2 kB] Get:117 http://mirror.bm.debian.org/debian/ jessie/main libpng12-0 amd64 1.2.50-2+deb8u3 [173 kB] Get:118 http://mirror.bm.debian.org/debian/ jessie/main libfreetype6 amd64 2.5.2-3+deb8u2 [466 kB] Get:119 http://mirror.bm.debian.org/debian/ jessie/main ucf all 3.0030 [69.7 kB] Get:120 http://mirror.bm.debian.org/debian/ jessie/main fonts-dejavu-core all 2.34-1 [1047 kB] Get:121 http://mirror.bm.debian.org/debian/ jessie/main fontconfig-config all 2.11.0-6.3+deb8u1 [274 kB] Get:122 http://mirror.bm.debian.org/debian/ jessie/main libfontconfig1 amd64 2.11.0-6.3+deb8u1 [329 kB] Get:123 http://mirror.bm.debian.org/debian/ jessie/main libjpeg62-turbo amd64 1:1.3.1-12 [116 kB] Get:124 http://mirror.bm.debian.org/debian/ jessie/main libjbig0 amd64 2.1-3.1 [30.7 kB] Get:125 http://mirror.bm.debian.org/debian/ jessie/main libtiff5 amd64 4.0.3-12.3+deb8u5 [221 kB] Get:126 http://mirror.bm.debian.org/debian/ jessie/main libvpx1 amd64 1.3.0-3+deb8u1 [600 kB] Get:127 http://mirror.bm.debian.org/debian/ jessie/main libx11-data all 2:1.6.2-3+deb8u1 [126 kB] Get:128 http://mirror.bm.debian.org/debian/ jessie/main libxau6 amd64 1:1.0.8-1 [20.7 kB] Get:129 http://mirror.bm.debian.org/debian/ jessie/main libxdmcp6 amd64 1:1.1.1-1+b1 [24.9 kB] Get:130 http://mirror.bm.debian.org/debian/ jessie/main libxcb1 amd64 1.10-3+b1 [44.4 kB] Get:131 http://mirror.bm.debian.org/debian/ jessie/main libx11-6 amd64 2:1.6.2-3+deb8u1 [728 kB] Get:132 http://mirror.bm.debian.org/debian/ jessie/main libxpm4 amd64 1:3.5.12-0+deb8u1 [49.2 kB] Get:133 http://mirror.bm.debian.org/debian/ jessie/main libgd3 amd64 2.1.0-5+deb8u11 [148 kB] Get:134 http://mirror.bm.debian.org/debian/ jessie/main mysql-common all 5.5.60-0+deb8u1 [75.4 kB] Get:135 http://mirror.bm.debian.org/debian/ jessie/main libmysqlclient18 amd64 5.5.60-0+deb8u1 [671 kB] Get:136 http://mirror.bm.debian.org/debian/ jessie/main libpam-runtime all 1.1.8-3.1+deb8u2 [212 kB] Get:137 http://mirror.bm.debian.org/debian/ jessie/main dbus amd64 1.8.22-0+deb8u1 [292 kB] Get:138 http://mirror.bm.debian.org/debian/ jessie/main libpam-systemd amd64 215-17+deb8u7 [126 kB] Get:139 http://mirror.bm.debian.org/debian/ jessie/main libpq5 amd64 9.4.18-0+deb8u1 [128 kB] Get:140 http://mirror.bm.debian.org/debian/ jessie/main multiarch-support amd64 2.19-18+deb8u10 [181 kB] Get:141 http://mirror.bm.debian.org/debian/ jessie/main debconf-i18n all 1.5.56+deb8u1 [206 kB] Get:142 http://mirror.bm.debian.org/debian/ jessie/main krb5-locales all 1.12.1+dfsg-19+deb8u4 [2649 kB] Get:143 http://mirror.bm.debian.org/debian/ jessie/main xz-utils amd64 5.1.1alpha+20120614-2+b3 [221 kB] Get:144 http://mirror.bm.debian.org/debian/ jessie/main dialign amd64 2.2.1-7 [135 kB] Get:145 http://mirror.bm.debian.org/debian/ jessie/main libhpdf-2.2.1 amd64 2.2.1-1.1 [322 kB] Get:146 http://mirror.bm.debian.org/debian/ jessie/main emboss amd64 6.6.0+dfsg-1 [1023 kB] Get:147 http://mirror.bm.debian.org/debian/ jessie/main emboss-data all 6.6.0+dfsg-1 [60.8 MB] Get:148 http://mirror.bm.debian.org/debian/ jessie/main embassy-domalign amd64 0.1.650-1 [66.6 kB] Get:149 http://mirror.bm.debian.org/debian/ jessie/main emboss-lib amd64 6.6.0+dfsg-1 [3102 kB] Get:150 http://mirror.bm.debian.org/debian/ jessie/main libpam-cap amd64 1:2.24-8 [12.5 kB] Get:151 http://mirror.bm.debian.org/debian/ jessie/main primer3 amd64 2.3.6-1 [168 kB] Get:152 http://mirror.bm.debian.org/debian/ jessie/main psmisc amd64 22.21-2 [119 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 114 MB in 4s (27.6 MB/s) (Reading database ... 9234 files and directories currently installed.) Preparing to replace libc6:amd64 2.13-38+deb7u10 (using .../libc6_2.19-18+deb8u10_amd64.deb) ... Checking for services that may need to be restarted... Checking init scripts... Unpacking replacement libc6:amd64 ... Setting up libc6:amd64 (2.19-18+deb8u10) ... Checking for services that may need to be restarted... Checking init scripts... Nothing to restart. (Reading database ... 9237 files and directories currently installed.) Preparing to replace libc-bin 2.13-38+deb7u10 (using .../libc-bin_2.19-18+deb8u10_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.19-18+deb8u10) ... Installing new version of config file /etc/bindresvport.blacklist ... Installing new version of config file /etc/gai.conf ... dpkg: gcc-4.7-base:amd64: dependency problems, but removing anyway as you requested: libstdc++6:amd64 depends on gcc-4.7-base (= 4.7.2-5). libgcc1:amd64 depends on gcc-4.7-base (= 4.7.2-5). (Reading database ... 9227 files and directories currently installed.) Removing gcc-4.7-base:amd64 ... Selecting previously unselected package gcc-4.9-base:amd64. (Reading database ... 9218 files and directories currently installed.) Unpacking gcc-4.9-base:amd64 (from .../gcc-4.9-base_4.9.2-10+deb8u1_amd64.deb) ... Setting up gcc-4.9-base:amd64 (4.9.2-10+deb8u1) ... (Reading database ... 9227 files and directories currently installed.) Preparing to replace libstdc++6:amd64 4.7.2-5 (using .../libstdc++6_4.9.2-10+deb8u1_amd64.deb) ... Unpacking replacement libstdc++6:amd64 ... Setting up libstdc++6:amd64 (4.9.2-10+deb8u1) ... Processing triggers for libc-bin ... (Reading database ... 9240 files and directories currently installed.) Preparing to replace libgcc1:amd64 1:4.7.2-5 (using .../libgcc1_1%3a4.9.2-10+deb8u1_amd64.deb) ... Unpacking replacement libgcc1:amd64 ... Setting up libgcc1:amd64 (1:4.9.2-10+deb8u1) ... Processing triggers for libc-bin ... (Reading database ... 9240 files and directories currently installed.) 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Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 8893 files and directories currently installed.) Preparing to unpack .../util-linux_2.25.2-6_amd64.deb ... Unpacking util-linux (2.25.2-6) over (2.20.1-5.3) ... Setting up util-linux (2.25.2-6) ... Installing new version of config file /etc/init.d/hwclock.sh ... Selecting previously unselected package libdevmapper1.02.1:amd64. (Reading database ... 9007 files and directories currently installed.) Preparing to unpack .../libdevmapper1.02.1_2%3a1.02.90-2.2+deb8u1_amd64.deb ... Unpacking libdevmapper1.02.1:amd64 (2:1.02.90-2.2+deb8u1) ... Selecting previously unselected package dmsetup. Preparing to unpack .../dmsetup_2%3a1.02.90-2.2+deb8u1_amd64.deb ... Unpacking dmsetup (2:1.02.90-2.2+deb8u1) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.90-2.2+deb8u1) ... Setting up dmsetup (2:1.02.90-2.2+deb8u1) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... 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Changing shell of daemon from /bin/sh to /usr/sbin/nologin Changing shell of bin from /bin/sh to /usr/sbin/nologin Changing shell of sys from /bin/sh to /usr/sbin/nologin Changing shell of games from /bin/sh to /usr/sbin/nologin Changing shell of man from /bin/sh to /usr/sbin/nologin Changing shell of lp from /bin/sh to /usr/sbin/nologin Changing shell of mail from /bin/sh to /usr/sbin/nologin Changing shell of news from /bin/sh to /usr/sbin/nologin Changing shell of uucp from /bin/sh to /usr/sbin/nologin Changing shell of proxy from /bin/sh to /usr/sbin/nologin Changing shell of www-data from /bin/sh to /usr/sbin/nologin Changing shell of backup from /bin/sh to /usr/sbin/nologin Changing shell of list from /bin/sh to /usr/sbin/nologin Changing shell of irc from /bin/sh to /usr/sbin/nologin Changing shell of gnats from /bin/sh to /usr/sbin/nologin Changing shell of nobody from /bin/sh to /usr/sbin/nologin 16 changes have been made, rewriting files Writing passwd-file to /etc/passwd Writing shadow-file to /etc/shadow Writing group-file to /etc/group (Reading database ... 10030 files and directories currently installed.) 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Preparing to unpack .../dialign_2.2.1-7_amd64.deb ... Unpacking dialign (2.2.1-7) over (2.2.1-5) ... Preparing to unpack .../libhpdf-2.2.1_2.2.1-1.1_amd64.deb ... Unpacking libhpdf-2.2.1 (2.2.1-1.1) over (2.2.1-1) ... Preparing to unpack .../emboss_6.6.0+dfsg-1_amd64.deb ... Unpacking emboss (6.6.0+dfsg-1) over (6.4.0-2) ... Preparing to unpack .../emboss-data_6.6.0+dfsg-1_all.deb ... Unpacking emboss-data (6.6.0+dfsg-1) over (6.4.0-2) ... Preparing to unpack .../embassy-domalign_0.1.650-1_amd64.deb ... Unpacking embassy-domalign (0.1.650-1) over (0.1.0+20110714-1) ... Preparing to unpack .../emboss-lib_6.6.0+dfsg-1_amd64.deb ... Unpacking emboss-lib (6.6.0+dfsg-1) over (6.4.0-2) ... Selecting previously unselected package libpam-cap:amd64. Preparing to unpack .../libpam-cap_1%3a2.24-8_amd64.deb ... Unpacking libpam-cap:amd64 (1:2.24-8) ... Preparing to unpack .../primer3_2.3.6-1_amd64.deb ... Unpacking primer3 (2.3.6-1) over (2.2.3-1) ... Selecting previously unselected package psmisc. Preparing to unpack .../psmisc_22.21-2_amd64.deb ... Unpacking psmisc (22.21-2) ... Setting up libtext-charwidth-perl (0.04-7+b3) ... Setting up libtext-iconv-perl (1.7-5+b2) ... Setting up liblocale-gettext-perl (1.05-8+b1) ... Setting up libssl1.0.0:amd64 (1.0.1t-1+deb8u8) ... Checking for services that may need to be restarted...done. Checking for services that may need to be restarted...done. Setting up libgmp10:amd64 (2:6.0.0+dfsg-6) ... Setting up libnettle4:amd64 (2.7.1-5+deb8u2) ... Setting up libhogweed2:amd64 (2.7.1-5+deb8u2) ... Setting up libffi6:amd64 (3.1-2+deb8u1) ... Setting up libp11-kit0:amd64 (0.20.7-1) ... Setting up libtasn1-6:amd64 (4.2-3+deb8u3) ... Setting up libgnutls-deb0-28:amd64 (3.3.8-6+deb8u7) ... Setting up libgpm2:amd64 (1.20.4-6.1+b2) ... Setting up libkeyutils1:amd64 (1.5.9-5+b1) ... Setting up libkrb5support0:amd64 (1.12.1+dfsg-19+deb8u4) ... Setting up libk5crypto3:amd64 (1.12.1+dfsg-19+deb8u4) ... Setting up libkrb5-3:amd64 (1.12.1+dfsg-19+deb8u4) ... Setting up libgssapi-krb5-2:amd64 (1.12.1+dfsg-19+deb8u4) ... Setting up libsasl2-modules:amd64 (2.1.26.dfsg1-13+deb8u1) ... Setting up libsasl2-modules-db:amd64 (2.1.26.dfsg1-13+deb8u1) ... Setting up libsasl2-2:amd64 (2.1.26.dfsg1-13+deb8u1) ... Setting up libldap-2.4-2:amd64 (2.4.40+dfsg-1+deb8u4) ... Setting up libcap-ng0:amd64 (0.7.4-2) ... Setting up libdbus-1-3:amd64 (1.8.22-0+deb8u1) ... Setting up libexpat1:amd64 (2.1.0-6+deb8u4) ... Setting up libpng12-0:amd64 (1.2.50-2+deb8u3) ... Setting up libfreetype6:amd64 (2.5.2-3+deb8u2) ... Setting up ucf (3.0030) ... Setting up fonts-dejavu-core (2.34-1) ... Setting up fontconfig-config (2.11.0-6.3+deb8u1) ... Setting up libfontconfig1:amd64 (2.11.0-6.3+deb8u1) ... Setting up libjpeg62-turbo:amd64 (1:1.3.1-12) ... Setting up libjbig0:amd64 (2.1-3.1) ... Setting up libtiff5:amd64 (4.0.3-12.3+deb8u5) ... Setting up libvpx1:amd64 (1.3.0-3+deb8u1) ... Setting up libx11-data (2:1.6.2-3+deb8u1) ... Setting up libxau6:amd64 (1:1.0.8-1) ... Setting up libxdmcp6:amd64 (1:1.1.1-1+b1) ... Setting up libxcb1:amd64 (1.10-3+b1) ... Setting up libx11-6:amd64 (2:1.6.2-3+deb8u1) ... Setting up libxpm4:amd64 (1:3.5.12-0+deb8u1) ... Setting up libgd3:amd64 (2.1.0-5+deb8u11) ... Setting up mysql-common (5.5.60-0+deb8u1) ... Installing new version of config file /etc/mysql/my.cnf ... Setting up libmysqlclient18:amd64 (5.5.60-0+deb8u1) ... Setting up dbus (1.8.22-0+deb8u1) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libpam-systemd:amd64 (215-17+deb8u7) ... Setting up libpq5:amd64 (9.4.18-0+deb8u1) ... Setting up debconf-i18n (1.5.56+deb8u1) ... Setting up krb5-locales (1.12.1+dfsg-19+deb8u4) ... Setting up xz-utils (5.1.1alpha+20120614-2+b3) ... Setting up dialign (2.2.1-7) ... Setting up libhpdf-2.2.1 (2.2.1-1.1) ... Setting up emboss-lib (6.6.0+dfsg-1) ... Setting up emboss-data (6.6.0+dfsg-1) ... Setting up emboss (6.6.0+dfsg-1) ... Setting up embassy-domalign (0.1.650-1) ... Setting up libpam-cap:amd64 (1:2.24-8) ... Setting up primer3 (2.3.6-1) ... Setting up psmisc (22.21-2) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... Processing triggers for systemd (215-17+deb8u7) ... 1m14.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-yf', 'dist-upgrade'] 1m14.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m17.2s DUMP: c58dd1ad19dd97acb5ff8b7cd65de431 - 1m17.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 1m17.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'show', '--no-all-versions', 'embassy-domalign'] 1m17.3s DUMP: Package: embassy-domalign Version: 0.1.650-1 Installed-Size: 638 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: emboss-lib (>= 6.6.0-1~), libc6 (>= 2.2.5), libx11-6, emboss-lib (<< 6.6.1~) Recommends: emboss Suggests: embassy Description-en: Extra EMBOSS commands for protein domain alignment The DOMALIGN programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress. . Applications in the current domalign release are allversusall (sequence similarity data from all-versus-all comparison), domainalign (generates alignments (DAF file) for nodes in a DCF file), domainrep (reorders DCF file to identify representative structures) and seqalign (extend alignments (DAF file) with sequences (DHF file)). Description-md5: 4149429333c4c57628815096efc54167 Homepage: http://emboss.sourceforge.net/apps/cvs/embassy/index.html#DOMALIGN Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::commandline, role::program, scope::utility, suite::TODO, use::analysing, use::comparing, use::editing, works-with-format::TODO, works-with-format::plaintext, works-with::TODO Section: science Priority: optional Filename: pool/main/e/embassy-domalign/embassy-domalign_0.1.650-1_amd64.deb Size: 66588 MD5sum: ebdb2b0295019fce3adbc26b8a721742 SHA1: 2e4647c315759ca91557a649a3e3f191510eaa89 SHA256: f38b910cd82b92cfb73b1f30a1b73d8b0efdfa66b45d7b1e5dcc5baf865469cf 1m17.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'show', '--no-all-versions', 'embassy-domalign'] 1m17.3s INFO: apt-cache knows about the following packages: embassy-domalign 1m17.3s INFO: Running scripts pre_install 1m17.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_database-server'] 1m17.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_database-server'] 1m17.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_exceptions'] 1m17.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_exceptions'] 1m17.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_extras'] 1m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_extras'] 1m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture'] 1m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture'] 1m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m17.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m17.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy'] 1m17.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror.bm.debian.org/debian/ jessie/main Translation-en 500 http://mirror.bm.debian.org/debian/ jessie/main amd64 Packages release v=8.11,o=Debian,a=oldstable,n=jessie,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy'] 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy', 'embassy-domalign'] 1m17.5s DUMP: embassy-domalign: Installed: 0.1.650-1 Candidate: 0.1.650-1 Version table: *** 0.1.650-1 0 500 http://mirror.bm.debian.org/debian/ jessie/main amd64 Packages 100 /var/lib/dpkg/status 1m17.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy', 'embassy-domalign'] 1m17.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-y', 'install', 'embassy-domalign'] 1m18.3s DUMP: Reading package lists... Building dependency tree... Reading state information... embassy-domalign is already the newest version. The following packages were automatically installed and are no longer required: libgcrypt11 libgd2-noxpm libgnutls26 libjpeg8 libtasn1-3 Use 'apt-get autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-y', 'install', 'embassy-domalign'] 1m18.3s INFO: Running scripts post_install 1m18.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_install_exceptions'] 1m18.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_install_exceptions'] 1m18.4s INFO: Running scripts post_distupgrade 1m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_base_cleanup'] 1m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_exceptions'] 1m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_exceptions'] 1m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_experimental'] 1m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_experimental'] 1m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 1m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_hack_debsums'] 1m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_hack_debsums'] 1m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_squeeze-backports'] 1m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_zz_backports'] 1m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_distupgrade_zz_backports'] 1m18.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m20.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m20.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m21.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m21.7s INFO: Running scripts pre_install 1m21.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_database-server'] 1m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_database-server'] 1m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_exceptions'] 1m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_exceptions'] 1m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_extras'] 1m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_extras'] 1m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture'] 1m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture'] 1m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m21.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_install_foreign_architecture_i386'] 1m21.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy'] 1m21.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror.bm.debian.org/debian/ jessie/main Translation-en 500 http://mirror.bm.debian.org/debian/ jessie/main amd64 Packages release v=8.11,o=Debian,a=oldstable,n=jessie,l=Debian,c=main origin mirror.bm.debian.org Pinned packages: 1m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy'] 1m21.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy', 'embassy-domalign'] 1m21.9s DUMP: embassy-domalign: Installed: 0.1.650-1 Candidate: 0.1.650-1 Version table: *** 0.1.650-1 0 500 http://mirror.bm.debian.org/debian/ jessie/main amd64 Packages 100 /var/lib/dpkg/status 1m21.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-cache', 'policy', 'embassy-domalign'] 1m21.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-y', 'install', 'embassy-domalign=0.1.650-1'] 1m22.6s DUMP: Reading package lists... Building dependency tree... Reading state information... embassy-domalign is already the newest version. The following packages were automatically installed and are no longer required: libgcrypt11 libgd2-noxpm libgnutls26 libjpeg8 libtasn1-3 Use 'apt-get autoremove' to remove them. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 1m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', '-y', 'install', 'embassy-domalign=0.1.650-1'] 1m22.6s INFO: Running scripts post_install 1m22.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_install_exceptions'] 1m22.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_install_exceptions'] 1m22.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m24.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m24.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m24.4s DUMP: install ok installed acl acl 2.2.52-2 install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 1.0.9.8.4 install ok installed base-files base-files 8+deb8u11 install ok installed base-passwd base-passwd 3.5.37 install ok installed bash bash 4.3-11+deb8u1 install ok installed bsdutils bsdutils 1:2.25.2-6 install ok installed coreutils coreutils 8.23-4 install ok installed dash dash 0.5.7-4+b1 install ok installed dbus dbus 1.8.22-0+deb8u1 install ok installed debconf debconf 1.5.56+deb8u1 install ok installed debconf-i18n debconf-i18n 1.5.56+deb8u1 install ok installed debian-archive-keyring debian-archive-keyring 2017.5~deb8u1 install ok installed debianutils debianutils 4.4+b1 install ok installed dialign dialign 2.2.1-7 install ok installed diffutils diffutils 1:3.3-1+b1 install ok installed dmsetup dmsetup 2:1.02.90-2.2+deb8u1 install ok installed dpkg dpkg 1.17.27 install ok installed e2fslibs:amd64 e2fslibs 1.42.12-2+b1 install ok installed e2fsprogs e2fsprogs 1.42.12-2+b1 install ok installed embassy-domalign embassy-domalign 0.1.650-1 install ok installed emboss emboss 6.6.0+dfsg-1 install ok installed emboss-data emboss-data 6.6.0+dfsg-1 install ok installed emboss-lib emboss-lib 6.6.0+dfsg-1 install ok installed findutils findutils 4.4.2-9+b1 install ok installed fontconfig-config fontconfig-config 2.11.0-6.3+deb8u1 install ok installed fonts-dejavu-core fonts-dejavu-core 2.34-1 install ok installed gcc-4.9-base:amd64 gcc-4.9-base 4.9.2-10+deb8u1 install ok installed gnupg gnupg 1.4.18-7+deb8u5 install ok installed gpgv gpgv 1.4.18-7+deb8u5 install ok installed grep grep 2.20-4.1 install ok installed gzip gzip 1.6-4 install ok installed hostname hostname 3.15 install ok installed init init 1.22 install ok installed initscripts initscripts 2.88dsf-59 install ok installed insserv insserv 1.14.0-5 install ok installed krb5-locales krb5-locales 1.12.1+dfsg-19+deb8u4 install ok installed libacl1:amd64 libacl1 2.2.52-2 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 1.0.9.8.4 install ok installed libattr1:amd64 libattr1 1:2.4.47-2 install ok installed libaudit-common libaudit-common 1:2.4-1 install ok installed libaudit1:amd64 libaudit1 1:2.4-1+b1 install ok installed libblkid1:amd64 libblkid1 2.25.2-6 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-7+b3 install ok installed libc-bin libc-bin 2.19-18+deb8u10 install ok installed libc6:amd64 libc6 2.19-18+deb8u10 install ok installed libcap-ng0:amd64 libcap-ng0 0.7.4-2 install ok installed libcap2:amd64 libcap2 1:2.24-8 install ok installed libcap2-bin libcap2-bin 1:2.24-8 install ok installed libcomerr2:amd64 libcomerr2 1.42.12-2+b1 install ok installed libcryptsetup4:amd64 libcryptsetup4 2:1.6.6-5 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5 install ok installed libdb5.3:amd64 libdb5.3 5.3.28-9+deb8u1 install ok installed libdbus-1-3:amd64 libdbus-1-3 1.8.22-0+deb8u1 install ok installed libdebconfclient0:amd64 libdebconfclient0 0.192 install ok installed libdevmapper1.02.1:amd64 libdevmapper1.02.1 2:1.02.90-2.2+deb8u1 install ok installed libexpat1:amd64 libexpat1 2.1.0-6+deb8u4 install ok installed libffi6:amd64 libffi6 3.1-2+deb8u1 install ok installed libfontconfig1:amd64 libfontconfig1 2.11.0-6.3+deb8u1 install ok installed libfreetype6:amd64 libfreetype6 2.5.2-3+deb8u2 install ok installed libgcc1:amd64 libgcc1 1:4.9.2-10+deb8u1 install ok installed libgcrypt11:amd64 libgcrypt11 1.5.0-5+deb7u4 install ok installed libgcrypt20:amd64 libgcrypt20 1.6.3-2+deb8u4 install ok installed libgd2-noxpm:amd64 libgd2-noxpm 2.0.36~rc1~dfsg-6.1+deb7u2 install ok installed libgd3:amd64 libgd3 2.1.0-5+deb8u11 install ok installed libgmp10:amd64 libgmp10 2:6.0.0+dfsg-6 install ok installed libgnutls-deb0-28:amd64 libgnutls-deb0-28 3.3.8-6+deb8u7 install ok installed libgnutls26:amd64 libgnutls26 2.12.20-8+deb7u5 install ok installed libgpg-error0:amd64 libgpg-error0 1.17-3 install ok installed libgpm2:amd64 libgpm2 1.20.4-6.1+b2 install ok installed libgssapi-krb5-2:amd64 libgssapi-krb5-2 1.12.1+dfsg-19+deb8u4 install ok installed libhogweed2:amd64 libhogweed2 2.7.1-5+deb8u2 install ok installed libhpdf-2.2.1 libhpdf-2.2.1 2.2.1-1.1 install ok installed libjbig0:amd64 libjbig0 2.1-3.1 install ok installed libjpeg62-turbo:amd64 libjpeg62-turbo 1:1.3.1-12 install ok installed libjpeg8:amd64 libjpeg8 8d-1+deb7u1 install ok installed libk5crypto3:amd64 libk5crypto3 1.12.1+dfsg-19+deb8u4 install ok installed libkeyutils1:amd64 libkeyutils1 1.5.9-5+b1 install ok installed libkmod2:amd64 libkmod2 18-3 install ok installed libkrb5-3:amd64 libkrb5-3 1.12.1+dfsg-19+deb8u4 install ok installed libkrb5support0:amd64 libkrb5support0 1.12.1+dfsg-19+deb8u4 install ok installed libldap-2.4-2:amd64 libldap-2.4-2 2.4.40+dfsg-1+deb8u4 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-8+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2+b3 install ok installed libmount1:amd64 libmount1 2.25.2-6 install ok installed libmysqlclient18:amd64 libmysqlclient18 5.5.60-0+deb8u1 install ok installed libncurses5:amd64 libncurses5 5.9+20140913-1+deb8u3 install ok installed libncursesw5:amd64 libncursesw5 5.9+20140913-1+deb8u3 install ok installed libnettle4:amd64 libnettle4 2.7.1-5+deb8u2 install ok installed libp11-kit0:amd64 libp11-kit0 0.20.7-1 install ok installed libpam-cap:amd64 libpam-cap 1:2.24-8 install ok installed libpam-modules:amd64 libpam-modules 1.1.8-3.1+deb8u2+b1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.8-3.1+deb8u2+b1 install ok installed libpam-runtime libpam-runtime 1.1.8-3.1+deb8u2 install ok installed libpam-systemd:amd64 libpam-systemd 215-17+deb8u7 install ok installed libpam0g:amd64 libpam0g 1.1.8-3.1+deb8u2+b1 install ok installed libpcre3:amd64 libpcre3 2:8.35-3.3+deb8u4 install ok installed libpng12-0:amd64 libpng12-0 1.2.50-2+deb8u3 install ok installed libpq5:amd64 libpq5 9.4.18-0+deb8u1 install ok installed libprocps3:amd64 libprocps3 2:3.3.9-9+deb8u1 install ok installed libreadline6:amd64 libreadline6 6.3-8+b3 install ok installed libsasl2-2:amd64 libsasl2-2 2.1.26.dfsg1-13+deb8u1 install ok installed libsasl2-modules:amd64 libsasl2-modules 2.1.26.dfsg1-13+deb8u1 install ok installed libsasl2-modules-db:amd64 libsasl2-modules-db 2.1.26.dfsg1-13+deb8u1 install ok installed libselinux1:amd64 libselinux1 2.3-2 install ok installed libsemanage-common libsemanage-common 2.3-1 install ok installed libsemanage1:amd64 libsemanage1 2.3-1+b1 install ok installed libsepol1:amd64 libsepol1 2.3-2 install ok installed libslang2:amd64 libslang2 2.3.0-2 install ok installed libsmartcols1:amd64 libsmartcols1 2.25.2-6 install ok installed libss2:amd64 libss2 1.42.12-2+b1 install ok installed libssl1.0.0:amd64 libssl1.0.0 1.0.1t-1+deb8u8 install ok installed libstdc++6:amd64 libstdc++6 4.9.2-10+deb8u1 install ok installed libsystemd0:amd64 libsystemd0 215-17+deb8u7 install ok installed libtasn1-3:amd64 libtasn1-3 2.13-2+deb7u2 install ok installed libtasn1-6:amd64 libtasn1-6 4.2-3+deb8u3 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b3 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5+b2 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtiff5:amd64 libtiff5 4.0.3-12.3+deb8u5 install ok installed libtinfo5:amd64 libtinfo5 5.9+20140913-1+deb8u3 install ok installed libudev1:amd64 libudev1 215-17+deb8u7 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-25 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3+b2 install ok installed libuuid1:amd64 libuuid1 2.25.2-6 install ok installed libvpx1:amd64 libvpx1 1.3.0-3+deb8u1 install ok installed libx11-6:amd64 libx11-6 2:1.6.2-3+deb8u1 install ok installed libx11-data libx11-data 2:1.6.2-3+deb8u1 install ok installed libxau6:amd64 libxau6 1:1.0.8-1 install ok installed libxcb1:amd64 libxcb1 1.10-3+b1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.1-1+b1 install ok installed libxpm4:amd64 libxpm4 1:3.5.12-0+deb8u1 install ok installed login login 1:4.2-3+deb8u4 install ok installed lsb-base lsb-base 4.1+Debian13+nmu1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.25.2-6 install ok installed multiarch-support multiarch-support 2.19-18+deb8u10 install ok installed mysql-common mysql-common 5.5.60-0+deb8u1 install ok installed ncurses-base ncurses-base 5.9+20140913-1+deb8u3 install ok installed ncurses-bin ncurses-bin 5.9+20140913-1+deb8u3 install ok installed passwd passwd 1:4.2-3+deb8u4 install ok installed perl-base perl-base 5.20.2-3+deb8u11 install ok installed primer3 primer3 2.3.6-1 install ok installed procps procps 2:3.3.9-9+deb8u1 install ok installed psmisc psmisc 22.21-2 install ok installed readline-common readline-common 6.3-8 install ok installed sed sed 4.2.2-4+deb8u1 install ok installed sensible-utils sensible-utils 0.0.9+deb8u1 install ok installed startpar startpar 0.59-3 install ok installed systemd systemd 215-17+deb8u7 install ok installed systemd-sysv systemd-sysv 215-17+deb8u7 install ok installed sysv-rc sysv-rc 2.88dsf-59 install ok installed sysvinit sysvinit 2.88dsf-59 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-59 install ok installed tar tar 1.27.1-2+deb8u1 install ok installed tzdata tzdata 2018e-0+deb8u1 install ok installed ucf ucf 3.0030 install ok installed udev udev 215-17+deb8u7 install ok installed util-linux util-linux 2.25.2-6 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2+b3 install ok installed zlib1g:amd64 zlib1g 1:1.2.8.dfsg-2+b1 1m24.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 1m25.9s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpg552SV', '-ac', '--ignore-obsolete'] 1m29.5s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpg552SV', '-ac', '--ignore-obsolete'] 1m29.5s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m29.5s DUMP: 0.15.1 1m29.5s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 1m29.5s INFO: Running adequate version 0.15.1 now. 1m29.5s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'embassy-domalign'] 1m30.6s DUMP: embassy-domalign: incompatible-licenses /usr/bin/seqalign GPLv2+ + OpenSSL (libssl.so.1.0.0) embassy-domalign: incompatible-licenses /usr/bin/domainalign GPLv2+ + OpenSSL (libssl.so.1.0.0) embassy-domalign: incompatible-licenses /usr/bin/allversusall GPLv2+ + OpenSSL (libssl.so.1.0.0) embassy-domalign: incompatible-licenses /usr/bin/domainrep GPLv2+ + OpenSSL (libssl.so.1.0.0) 1m30.6s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'embassy-domalign'] 1m30.6s ERROR: WARN: Inadequate results from running adequate! embassy-domalign: incompatible-licenses /usr/bin/seqalign GPLv2+ + OpenSSL (libssl.so.1.0.0) embassy-domalign: incompatible-licenses /usr/bin/domainalign GPLv2+ + OpenSSL (libssl.so.1.0.0) embassy-domalign: incompatible-licenses /usr/bin/allversusall GPLv2+ + OpenSSL (libssl.so.1.0.0) embassy-domalign: incompatible-licenses /usr/bin/domainrep GPLv2+ + OpenSSL (libssl.so.1.0.0) 1m30.6s ERROR: WARN: Running adequate resulted in inadequate tags found: incompatible-licenses 1m30.6s INFO: Running scripts pre_remove 1m30.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 1m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 1m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m34.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 1m34.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 1m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m34.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 1m34.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_exceptions'] 1m34.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/pre_remove_exceptions'] 1m34.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', 'remove', 'libx11-data', 'libfreetype6:amd64', 'libgssapi-krb5-2:amd64', 'libgcrypt11:amd64', 'dialign', 'libx11-6:amd64', 'fonts-dejavu-core', 'libvpx1:amd64', 'libfontconfig1:amd64', 'mysql-common', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'libtasn1-3:amd64', 'emboss', 'primer3', 'emboss-lib', 'libkrb5support0:amd64', 'libtiff5:amd64', 'libssl1.0.0:amd64', 'libnettle4:amd64', 'libgmp10:amd64', 'emboss-data', 'libhpdf-2.2.1', 'libgd3:amd64', 'libxcb1:amd64', 'libjpeg62-turbo:amd64', 'libxdmcp6:amd64', 'libsasl2-modules:amd64', 'libtasn1-6:amd64', 'libgd2-noxpm:amd64', 'libsasl2-modules-db:amd64', 'libjbig0:amd64', 'libkrb5-3:amd64', 'libxau6:amd64', 'libpq5:amd64', 'libpng12-0:amd64', 'libmysqlclient18:amd64', 'libxpm4:amd64', 'krb5-locales', 'libp11-kit0:amd64', 'fontconfig-config', 'libsasl2-2:amd64', 'libdb5.1:amd64', 'libffi6:amd64', 'libgnutls-deb0-28:amd64', 'libgnutls26:amd64', 'libldap-2.4-2:amd64', 'libk5crypto3:amd64', 'libhogweed2:amd64', 'embassy-domalign'] 1m36.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: dialign embassy-domalign emboss emboss-data emboss-lib fontconfig-config fonts-dejavu-core krb5-locales libdb5.1 libffi6 libfontconfig1 libfreetype6 libgcrypt11 libgd2-noxpm libgd3 libgmp10 libgnutls-deb0-28 libgnutls26 libgssapi-krb5-2 libhogweed2 libhpdf-2.2.1 libjbig0 libjpeg62-turbo libjpeg8 libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.4-2 libmysqlclient18 libnettle4 libp11-kit0 libpng12-0 libpq5 libsasl2-2 libsasl2-modules libsasl2-modules-db libssl1.0.0 libtasn1-3 libtasn1-6 libtiff5 libvpx1 libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxpm4 mysql-common primer3 0 upgraded, 0 newly installed, 50 to remove and 0 not upgraded. After this operation, 530 MB disk space will be freed. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 10541 files and directories currently installed.) Removing dialign (2.2.1-7) ... Removing embassy-domalign (0.1.650-1) ... Removing emboss (6.6.0+dfsg-1) ... Removing emboss-data (6.6.0+dfsg-1) ... Removing emboss-lib (6.6.0+dfsg-1) ... Removing libgd3:amd64 (2.1.0-5+deb8u11) ... Removing libfontconfig1:amd64 (2.11.0-6.3+deb8u1) ... Removing fontconfig-config (2.11.0-6.3+deb8u1) ... Removing fonts-dejavu-core (2.34-1) ... Removing krb5-locales (1.12.1+dfsg-19+deb8u4) ... Removing libdb5.1:amd64 (5.1.29-5) ... Removing libgnutls26:amd64 (2.12.20-8+deb7u5) ... Removing libpq5:amd64 (9.4.18-0+deb8u1) ... Removing libldap-2.4-2:amd64 (2.4.40+dfsg-1+deb8u4) ... Removing libgnutls-deb0-28:amd64 (3.3.8-6+deb8u7) ... Removing libp11-kit0:amd64 (0.20.7-1) ... Removing libffi6:amd64 (3.1-2+deb8u1) ... Removing libgd2-noxpm:amd64 (2.0.36~rc1~dfsg-6.1+deb7u2) ... Removing libfreetype6:amd64 (2.5.2-3+deb8u2) ... Removing libgcrypt11:amd64 (1.5.0-5+deb7u4) ... Removing libhogweed2:amd64 (2.7.1-5+deb8u2) ... Removing libgmp10:amd64 (2:6.0.0+dfsg-6) ... Removing libgssapi-krb5-2:amd64 (1.12.1+dfsg-19+deb8u4) ... Removing libhpdf-2.2.1 (2.2.1-1.1) ... Removing libtiff5:amd64 (4.0.3-12.3+deb8u5) ... Removing libjbig0:amd64 (2.1-3.1) ... Removing libjpeg62-turbo:amd64 (1:1.3.1-12) ... Removing libjpeg8:amd64 (8d-1+deb7u1) ... Removing libkrb5-3:amd64 (1.12.1+dfsg-19+deb8u4) ... Removing libk5crypto3:amd64 (1.12.1+dfsg-19+deb8u4) ... Removing libkrb5support0:amd64 (1.12.1+dfsg-19+deb8u4) ... Removing libkeyutils1:amd64 (1.5.9-5+b1) ... Removing libmysqlclient18:amd64 (5.5.60-0+deb8u1) ... Removing libnettle4:amd64 (2.7.1-5+deb8u2) ... Removing libpng12-0:amd64 (1.2.50-2+deb8u3) ... Removing libsasl2-2:amd64 (2.1.26.dfsg1-13+deb8u1) ... Removing libsasl2-modules:amd64 (2.1.26.dfsg1-13+deb8u1) ... Removing libsasl2-modules-db:amd64 (2.1.26.dfsg1-13+deb8u1) ... Removing libssl1.0.0:amd64 (1.0.1t-1+deb8u8) ... Removing libtasn1-3:amd64 (2.13-2+deb7u2) ... Removing libtasn1-6:amd64 (4.2-3+deb8u3) ... Removing libvpx1:amd64 (1.3.0-3+deb8u1) ... Removing libxpm4:amd64 (1:3.5.12-0+deb8u1) ... Removing libx11-6:amd64 (2:1.6.2-3+deb8u1) ... Removing libx11-data (2:1.6.2-3+deb8u1) ... Removing libxcb1:amd64 (1.10-3+b1) ... Removing libxau6:amd64 (1:1.0.8-1) ... Removing libxdmcp6:amd64 (1:1.1.1-1+b1) ... Removing mysql-common (5.5.60-0+deb8u1) ... Removing primer3 (2.3.6-1) ... Processing triggers for libc-bin (2.19-18+deb8u10) ... 1m36.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', 'remove', 'libx11-data', 'libfreetype6:amd64', 'libgssapi-krb5-2:amd64', 'libgcrypt11:amd64', 'dialign', 'libx11-6:amd64', 'fonts-dejavu-core', 'libvpx1:amd64', 'libfontconfig1:amd64', 'mysql-common', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'libtasn1-3:amd64', 'emboss', 'primer3', 'emboss-lib', 'libkrb5support0:amd64', 'libtiff5:amd64', 'libssl1.0.0:amd64', 'libnettle4:amd64', 'libgmp10:amd64', 'emboss-data', 'libhpdf-2.2.1', 'libgd3:amd64', 'libxcb1:amd64', 'libjpeg62-turbo:amd64', 'libxdmcp6:amd64', 'libsasl2-modules:amd64', 'libtasn1-6:amd64', 'libgd2-noxpm:amd64', 'libsasl2-modules-db:amd64', 'libjbig0:amd64', 'libkrb5-3:amd64', 'libxau6:amd64', 'libpq5:amd64', 'libpng12-0:amd64', 'libmysqlclient18:amd64', 'libxpm4:amd64', 'krb5-locales', 'libp11-kit0:amd64', 'fontconfig-config', 'libsasl2-2:amd64', 'libdb5.1:amd64', 'libffi6:amd64', 'libgnutls-deb0-28:amd64', 'libgnutls26:amd64', 'libldap-2.4-2:amd64', 'libk5crypto3:amd64', 'libhogweed2:amd64', 'embassy-domalign'] 1m36.6s INFO: Running scripts post_remove 1m36.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_remove_exceptions'] 1m36.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_remove_exceptions'] 1m36.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_remove_extras'] 1m36.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_remove_extras'] 1m36.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg', '--purge', 'libx11-data', 'libfreetype6:amd64', 'libgssapi-krb5-2:amd64', 'libgcrypt11:amd64', 'dialign', 'libx11-6:amd64', 'fonts-dejavu-core', 'libvpx1:amd64', 'libfontconfig1:amd64', 'mysql-common', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'libtasn1-3:amd64', 'emboss', 'primer3', 'emboss-lib', 'libkrb5support0:amd64', 'libtiff5:amd64', 'libssl1.0.0:amd64', 'libnettle4:amd64', 'libgmp10:amd64', 'emboss-data', 'libhpdf-2.2.1', 'libgd3:amd64', 'libxcb1:amd64', 'libjpeg62-turbo:amd64', 'libxdmcp6:amd64', 'libsasl2-modules:amd64', 'libtasn1-6:amd64', 'libgd2-noxpm:amd64', 'libsasl2-modules-db:amd64', 'libjbig0:amd64', 'libkrb5-3:amd64', 'libxau6:amd64', 'libpq5:amd64', 'libpng12-0:amd64', 'libmysqlclient18:amd64', 'libxpm4:amd64', 'krb5-locales', 'libp11-kit0:amd64', 'fontconfig-config', 'libsasl2-2:amd64', 'libdb5.1:amd64', 'libffi6:amd64', 'libgnutls-deb0-28:amd64', 'libgnutls26:amd64', 'libldap-2.4-2:amd64', 'libk5crypto3:amd64', 'libhogweed2:amd64'] 1m37.9s DUMP: dpkg: warning: ignoring request to remove libx11-data which isn't installed (Reading database ... 7714 files and directories currently installed.) Removing libfreetype6:amd64 (2.5.2-3+deb8u2) ... Purging configuration files for libfreetype6:amd64 (2.5.2-3+deb8u2) ... Removing libgssapi-krb5-2:amd64 (1.12.1+dfsg-19+deb8u4) ... Purging configuration files for libgssapi-krb5-2:amd64 (1.12.1+dfsg-19+deb8u4) ... Removing libgcrypt11:amd64 (1.5.0-5+deb7u4) ... Purging configuration files for libgcrypt11:amd64 (1.5.0-5+deb7u4) ... dpkg: warning: ignoring request to remove dialign which isn't installed Removing libx11-6:amd64 (2:1.6.2-3+deb8u1) ... Purging configuration files for libx11-6:amd64 (2:1.6.2-3+deb8u1) ... Removing fonts-dejavu-core (2.34-1) ... Purging configuration files for fonts-dejavu-core (2.34-1) ... Removing libvpx1:amd64 (1.3.0-3+deb8u1) ... Purging configuration files for libvpx1:amd64 (1.3.0-3+deb8u1) ... Removing libfontconfig1:amd64 (2.11.0-6.3+deb8u1) ... Purging configuration files for libfontconfig1:amd64 (2.11.0-6.3+deb8u1) ... Removing mysql-common (5.5.60-0+deb8u1) ... Purging configuration files for mysql-common (5.5.60-0+deb8u1) ... dpkg: warning: ignoring request to remove libjpeg8 which isn't installed Removing libkeyutils1:amd64 (1.5.9-5+b1) ... Purging configuration files for libkeyutils1:amd64 (1.5.9-5+b1) ... Removing libtasn1-3:amd64 (2.13-2+deb7u2) ... Purging configuration files for libtasn1-3:amd64 (2.13-2+deb7u2) ... dpkg: warning: ignoring request to remove emboss which isn't installed Removing primer3 (2.3.6-1) ... Purging configuration files for primer3 (2.3.6-1) ... Removing emboss-lib (6.6.0+dfsg-1) ... Purging configuration files for emboss-lib (6.6.0+dfsg-1) ... Removing libkrb5support0:amd64 (1.12.1+dfsg-19+deb8u4) ... Purging configuration files for libkrb5support0:amd64 (1.12.1+dfsg-19+deb8u4) ... Removing libtiff5:amd64 (4.0.3-12.3+deb8u5) ... Purging configuration files for libtiff5:amd64 (4.0.3-12.3+deb8u5) ... Removing libssl1.0.0:amd64 (1.0.1t-1+deb8u8) ... Purging configuration files for libssl1.0.0:amd64 (1.0.1t-1+deb8u8) ... Removing libnettle4:amd64 (2.7.1-5+deb8u2) ... Purging configuration files for libnettle4:amd64 (2.7.1-5+deb8u2) ... Removing libgmp10:amd64 (2:6.0.0+dfsg-6) ... Purging configuration files for libgmp10:amd64 (2:6.0.0+dfsg-6) ... dpkg: warning: ignoring request to remove emboss-data which isn't installed Removing libhpdf-2.2.1 (2.2.1-1.1) ... Purging configuration files for libhpdf-2.2.1 (2.2.1-1.1) ... Removing libgd3:amd64 (2.1.0-5+deb8u11) ... Purging configuration files for libgd3:amd64 (2.1.0-5+deb8u11) ... Removing libxcb1:amd64 (1.10-3+b1) ... Purging configuration files for libxcb1:amd64 (1.10-3+b1) ... Removing libjpeg62-turbo:amd64 (1:1.3.1-12) ... Purging configuration files for libjpeg62-turbo:amd64 (1:1.3.1-12) ... Removing libxdmcp6:amd64 (1:1.1.1-1+b1) ... Purging configuration files for libxdmcp6:amd64 (1:1.1.1-1+b1) ... Removing libsasl2-modules:amd64 (2.1.26.dfsg1-13+deb8u1) ... Purging configuration files for libsasl2-modules:amd64 (2.1.26.dfsg1-13+deb8u1) ... Removing libtasn1-6:amd64 (4.2-3+deb8u3) ... Purging configuration files for libtasn1-6:amd64 (4.2-3+deb8u3) ... Removing libgd2-noxpm:amd64 (2.0.36~rc1~dfsg-6.1+deb7u2) ... Purging configuration files for libgd2-noxpm:amd64 (2.0.36~rc1~dfsg-6.1+deb7u2) ... dpkg: warning: ignoring request to remove libsasl2-modules-db which isn't installed Removing libjbig0:amd64 (2.1-3.1) ... Purging configuration files for libjbig0:amd64 (2.1-3.1) ... Removing libkrb5-3:amd64 (1.12.1+dfsg-19+deb8u4) ... Purging configuration files for libkrb5-3:amd64 (1.12.1+dfsg-19+deb8u4) ... Removing libxau6:amd64 (1:1.0.8-1) ... Purging configuration files for libxau6:amd64 (1:1.0.8-1) ... Removing libpq5:amd64 (9.4.18-0+deb8u1) ... Purging configuration files for libpq5:amd64 (9.4.18-0+deb8u1) ... Removing libpng12-0:amd64 (1.2.50-2+deb8u3) ... Purging configuration files for libpng12-0:amd64 (1.2.50-2+deb8u3) ... Removing libmysqlclient18:amd64 (5.5.60-0+deb8u1) ... Purging configuration files for libmysqlclient18:amd64 (5.5.60-0+deb8u1) ... Removing libxpm4:amd64 (1:3.5.12-0+deb8u1) ... Purging configuration files for libxpm4:amd64 (1:3.5.12-0+deb8u1) ... dpkg: warning: ignoring request to remove krb5-locales which isn't installed Removing libp11-kit0:amd64 (0.20.7-1) ... Purging configuration files for libp11-kit0:amd64 (0.20.7-1) ... Removing fontconfig-config (2.11.0-6.3+deb8u1) ... Purging configuration files for fontconfig-config (2.11.0-6.3+deb8u1) ... Removing libsasl2-2:amd64 (2.1.26.dfsg1-13+deb8u1) ... Purging configuration files for libsasl2-2:amd64 (2.1.26.dfsg1-13+deb8u1) ... Removing libdb5.1:amd64 (5.1.29-5) ... Purging configuration files for libdb5.1:amd64 (5.1.29-5) ... Removing libffi6:amd64 (3.1-2+deb8u1) ... Purging configuration files for libffi6:amd64 (3.1-2+deb8u1) ... Removing libgnutls-deb0-28:amd64 (3.3.8-6+deb8u7) ... Purging configuration files for libgnutls-deb0-28:amd64 (3.3.8-6+deb8u7) ... Removing libgnutls26:amd64 (2.12.20-8+deb7u5) ... Purging configuration files for libgnutls26:amd64 (2.12.20-8+deb7u5) ... Removing libldap-2.4-2:amd64 (2.4.40+dfsg-1+deb8u4) ... Purging configuration files for libldap-2.4-2:amd64 (2.4.40+dfsg-1+deb8u4) ... Removing libk5crypto3:amd64 (1.12.1+dfsg-19+deb8u4) ... Purging configuration files for libk5crypto3:amd64 (1.12.1+dfsg-19+deb8u4) ... Removing libhogweed2:amd64 (2.7.1-5+deb8u2) ... Purging configuration files for libhogweed2:amd64 (2.7.1-5+deb8u2) ... 1m37.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg', '--purge', 'libx11-data', 'libfreetype6:amd64', 'libgssapi-krb5-2:amd64', 'libgcrypt11:amd64', 'dialign', 'libx11-6:amd64', 'fonts-dejavu-core', 'libvpx1:amd64', 'libfontconfig1:amd64', 'mysql-common', 'libjpeg8:amd64', 'libkeyutils1:amd64', 'libtasn1-3:amd64', 'emboss', 'primer3', 'emboss-lib', 'libkrb5support0:amd64', 'libtiff5:amd64', 'libssl1.0.0:amd64', 'libnettle4:amd64', 'libgmp10:amd64', 'emboss-data', 'libhpdf-2.2.1', 'libgd3:amd64', 'libxcb1:amd64', 'libjpeg62-turbo:amd64', 'libxdmcp6:amd64', 'libsasl2-modules:amd64', 'libtasn1-6:amd64', 'libgd2-noxpm:amd64', 'libsasl2-modules-db:amd64', 'libjbig0:amd64', 'libkrb5-3:amd64', 'libxau6:amd64', 'libpq5:amd64', 'libpng12-0:amd64', 'libmysqlclient18:amd64', 'libxpm4:amd64', 'krb5-locales', 'libp11-kit0:amd64', 'fontconfig-config', 'libsasl2-2:amd64', 'libdb5.1:amd64', 'libffi6:amd64', 'libgnutls-deb0-28:amd64', 'libgnutls26:amd64', 'libldap-2.4-2:amd64', 'libk5crypto3:amd64', 'libhogweed2:amd64'] 1m37.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg', '--purge', 'embassy-domalign'] 1m37.9s DUMP: dpkg: warning: ignoring request to remove embassy-domalign which isn't installed 1m37.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg', '--purge', 'embassy-domalign'] 1m37.9s INFO: Running scripts post_purge 1m37.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_purge_exceptions'] 1m38.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_purge_exceptions'] 1m38.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg', '--purge', '--pending'] 1m38.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg', '--purge', '--pending'] 1m38.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg', '--remove', '--pending'] 1m38.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg', '--remove', '--pending'] 1m38.0s INFO: Running scripts post_test 1m38.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_test_exceptions'] 1m38.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'tmp/scripts/post_test_exceptions'] 1m38.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m39.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m39.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg-divert', '--list'] 1m39.4s DUMP: local diversion of /bin/sync to /bin/sync.distrib diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 1m39.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'dpkg-divert', '--list'] 1m39.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', 'clean'] 1m39.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpg552SV', 'apt-get', 'clean'] 1m39.4s DEBUG: Recording chroot state 1m43.3s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/run/shm'] 1m43.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/run/shm'] 1m43.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/console'] 1m43.4s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/console'] 1m43.4s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/ptmx'] 1m43.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/ptmx'] 1m43.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/pts'] 1m43.5s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/dev/pts'] 1m43.5s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/proc'] 1m43.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpg552SV/proc'] 1m43.6s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m43.8s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpg552SV'] 1m43.8s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpg552SV 1m43.9s INFO: PASS: Upgrading between Debian distributions. 1m43.9s INFO: PASS: All tests. 1m43.9s INFO: piuparts run ends. ret=0 End: 2019-04-17 22:56:42 UTC