Start: 2023-03-22 19:26:29 GMT [wheezy] Package: circos Version: 0.61-3 Installed-Size: 7611 Maintainer: Debian Med Packaging Team Architecture: all Depends: perl (>= 5.10), fonts-circos-symbols, fonts-cmu, libregexp-common-perl, libcarp-always-perl, libconfig-general-perl (>= 2.5), libdata-dumper-simple-perl, libgd-gd2-perl, libgetopt-simple-perl, libmath-bezier-perl, libmath-round-perl, libparams-validate-perl, libreadonly-perl, libset-intspan-perl (>= 1.16), liblist-allutils-perl, libfile-basedir-perl, libfile-spec-perl, libmath-bigint-perl, libmath-vec-perl, libio-all-perl, libmath-vecstat-perl, libgraphics-colorobject-perl, libtext-format-perl, libfont-ttf-perl, libclone-perl Pre-Depends: dpkg (>= 1.15.6) Recommends: circos-tools Description: plotter for visualizing data Homepage: http://circos.ca/ Description-md5: b1d5e394e1ff44315fac8498f49a2505 Tag: field::biology:bioinformatics, implemented-in::perl, role::program, use::viewing Section: science Priority: optional Filename: pool/main/c/circos/circos_0.61-3_all.deb Size: 4512326 MD5sum: 2aac41789c554697d2481d0bcbf0ea21 SHA1: a7bf81d34ad2d4293db8df8abea6a2de1d6be914 SHA256: 8f02c3a32ef81a07447bfa906de97520beca3a62e5989d2e8d2bdef416054323 [jessie] Package: circos Version: 0.66-1 Installed-Size: 22719 Maintainer: Debian Med Packaging Team Architecture: all Depends: perl (>= 5.10), fonts-circos-symbols, fonts-cmu, libregexp-common-perl, libcarp-always-perl, libconfig-general-perl (>= 2.5), libdata-dumper-simple-perl, libgd-gd2-perl, libgetopt-simple-perl, libmath-bezier-perl, libmath-round-perl, libparams-validate-perl, libreadonly-perl, libset-intspan-perl (>= 1.16), liblist-allutils-perl, libfile-basedir-perl, libfile-spec-perl, libmath-bigint-perl, libmath-vec-perl, libio-all-perl, libmath-vecstat-perl, libgraphics-colorobject-perl, libtext-format-perl, libfont-ttf-perl, libclone-perl Pre-Depends: dpkg (>= 1.15.6) Recommends: circos-tools Description: plotter for visualizing data Homepage: http://circos.ca/ Description-md5: b1d5e394e1ff44315fac8498f49a2505 Tag: field::biology:bioinformatics, implemented-in::perl, role::program, use::viewing Section: science Priority: optional Filename: pool/main/c/circos/circos_0.66-1_all.deb Size: 19211832 MD5sum: 410b3e9cd346d22740d580e31cafbe6c SHA1: 11c08e01bae49ffa24634e5329d4cd87af88b60f SHA256: 54486c0e605985ef3521081b5e0d07674b1c1d0845092919d2c9a4cae6e3c4e4 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie/reference-chroot-metadata.dat --apt circos=0.66-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie/reference-chroot-metadata.dat --apt circos=0.66-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmprbdjpown 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmprbdjpown 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmprbdjpown', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.3s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmprbdjpown', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.3s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmprbdjpown/proc'] 0m1.3s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmprbdjpown/proc'] 0m1.3s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/pts'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/pts'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/ptmx'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/ptmx'] 0m1.4s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/console'] 0m1.4s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/2', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/console'] 0m1.4s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmprbdjpown/run/shm'] 0m1.4s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmprbdjpown/run/shm'] 0m1.4s DEBUG: sources.list: deb http://archive.debian.org/debian wheezy main 0m1.4s DEBUG: Created policy-rc.d and chmodded it. 0m1.4s DEBUG: Created resolv.conf. 0m1.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmprbdjpown/tmp/scripts/ 0m1.4s DEBUG: Copying scriptsdir /etc/piuparts/scripts-jessie to /srv/piuparts.debian.org/tmp/tmprbdjpown/tmp/scripts/ 0m1.4s INFO: Running scripts post_chroot_unpack 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmprbdjpown', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DUMP: Creating /etc/apt/apt.conf.d/unauthenticated-wheezy ... # The Release file is not getting updated. Acquire::Check-Valid-Until "false"; 0m1.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmprbdjpown', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmprbdjpown', 'apt-get', 'update'] 0m1.5s DUMP: E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m1.5s ERROR: Command failed (status=100): ['chroot', '/srv/piuparts.debian.org/tmp/tmprbdjpown', 'apt-get', 'update'] E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/run/shm'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/run/shm'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/console'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/console'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/ptmx'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/ptmx'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/pts'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/dev/pts'] 0m1.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/proc'] 0m1.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmprbdjpown/proc'] 0m1.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmprbdjpown'] 0m1.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmprbdjpown'] 0m1.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmprbdjpown 0m1.9s ERROR: piuparts run ends. ret=1 End: 2023-03-22 19:26:31 GMT