Start: 2023-03-22 19:40:10 GMT [wheezy] Package: sra-toolkit-libs0 Source: sra-sdk Version: 2.1.7a-1 Installed-Size: 2310 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libbz2-1.0, libc6 (>= 2.3.2), zlib1g (>= 1:1.2.2) Description: Libraries for the SRA Toolkit Homepage: http://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software Description-md5: 67fb145957f0ea9ebb0c43eb61a59710 Section: science Priority: optional Filename: pool/main/s/sra-sdk/sra-toolkit-libs0_2.1.7a-1_amd64.deb Size: 911984 MD5sum: 8494ecc96713b94d2f918f57d54a1dc7 SHA1: 6bd1dc74c513c0d1326c183701ddacb7603c9240 SHA256: 63cece1511b50751af7108f5d99c5614a0e88ebc733584ed641fbdbd673f7aa8 [jessie] Package: sra-toolkit-libs0 Source: sra-sdk Version: 2.3.5-2+dfsg-1 Installed-Size: 5706 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: libbz2-1.0, libc6 (>= 2.14), libxml2 (>= 2.7.4), zlib1g (>= 1:1.2.2) Description: Libraries for the SRA Toolkit Homepage: http://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software Description-md5: 67fb145957f0ea9ebb0c43eb61a59710 Section: science Priority: optional Filename: pool/main/s/sra-sdk/sra-toolkit-libs0_2.3.5-2+dfsg-1_amd64.deb Size: 1121556 MD5sum: 541b51dc5ea6382cdcda0d3d7db5f53d SHA1: e9f91860efa47e7c3d77b74afd5df2436efcc21e SHA256: f1afc9aa1fe357def614f222d4ec955ccb778be849d1309ab4df3001f8145127 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python3/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie/reference-chroot-metadata.dat --apt sra-toolkit-libs0=2.3.5-2+dfsg-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 1.1.5 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-jessie --skip-logrotatefiles-test --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://deb.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d jessie -S /srv/piuparts.debian.org/slave/refchroot/wheezy2jessie/reference-chroot-metadata.dat --apt sra-toolkit-libs0=2.3.5-2+dfsg-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmphf7jstjc 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmphf7jstjc 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmphf7jstjc', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.6s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmphf7jstjc', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/proc'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/proc'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/pts'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/pts'] 0m1.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/ptmx'] 0m1.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/ptmx'] 0m1.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/console'] 0m1.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/console'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/run/shm'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/run/shm'] 0m1.6s DEBUG: sources.list: deb http://archive.debian.org/debian wheezy main 0m1.7s DEBUG: Created policy-rc.d and chmodded it. 0m1.7s DEBUG: Created resolv.conf. 0m1.7s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmphf7jstjc/tmp/scripts/ 0m1.7s DEBUG: Copying scriptsdir /etc/piuparts/scripts-jessie to /srv/piuparts.debian.org/tmp/tmphf7jstjc/tmp/scripts/ 0m1.7s INFO: Running scripts post_chroot_unpack 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphf7jstjc', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.7s DUMP: Creating /etc/apt/apt.conf.d/unauthenticated-wheezy ... # The Release file is not getting updated. Acquire::Check-Valid-Until "false"; 0m1.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmphf7jstjc', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmphf7jstjc', 'apt-get', 'update'] 0m1.7s DUMP: E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m1.7s ERROR: Command failed (status=100): ['chroot', '/srv/piuparts.debian.org/tmp/tmphf7jstjc', 'apt-get', 'update'] E: Method http has died unexpectedly! E: Sub-process http received a segmentation fault. 0m2.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/run/shm'] 0m2.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/run/shm'] 0m2.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/console'] 0m2.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/console'] 0m2.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/ptmx'] 0m2.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/ptmx'] 0m2.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/pts'] 0m2.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/dev/pts'] 0m2.0s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/proc'] 0m2.0s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmphf7jstjc/proc'] 0m2.0s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmphf7jstjc'] 0m2.1s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmphf7jstjc'] 0m2.1s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmphf7jstjc 0m2.1s ERROR: piuparts run ends. ret=1 End: 2023-03-22 19:40:13 GMT