Start: 2018-02-28 13:01:58 UTC [wheezy] Package: circos-tools Version: 0.16-2 Installed-Size: 19386 Maintainer: Debian Med Packaging Team Architecture: all Depends: perl, circos Pre-Depends: dpkg (>= 1.15.6) Description: Helper tools for Circos Homepage: http://circos.ca/ Description-md5: cf9d54120046a32febcd05fb72c7b3bd Tag: field::biology:bioinformatics, implemented-in::perl, role::program Section: science Priority: optional Filename: pool/main/c/circos-tools/circos-tools_0.16-2_all.deb Size: 8210438 MD5sum: 5698791a3da9ae428652a965018c5711 SHA1: fbbb322f7df50fb013f6a14af0573f56405c89ac SHA256: 43d8fa07f6e907921a9c138a74ae3395b793bada0aef86672b6403e2116dcfca [wheezy-lts] Package: circos-tools Version: 0.16-2 Installed-Size: 19386 Maintainer: Debian Med Packaging Team Architecture: all Depends: perl, circos Pre-Depends: dpkg (>= 1.15.6) Description: Helper tools for Circos Homepage: http://circos.ca/ Description-md5: cf9d54120046a32febcd05fb72c7b3bd Tag: field::biology:bioinformatics, implemented-in::perl, role::program Section: science Priority: optional Filename: pool/main/c/circos-tools/circos-tools_0.16-2_all.deb Size: 8210438 MD5sum: 5698791a3da9ae428652a965018c5711 SHA1: fbbb322f7df50fb013f6a14af0573f56405c89ac SHA256: 43d8fa07f6e907921a9c138a74ae3395b793bada0aef86672b6403e2116dcfca Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d wheezy-lts -B reference-chroot-metadata.dat --apt circos-tools=0.16-2 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.84~201801121524~0.83-4-g6e16ed9a starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d wheezy-lts -B reference-chroot-metadata.dat --apt circos-tools=0.16-2 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.9.0-6-amd64 #1 SMP Debian 4.9.82-1+deb9u2 (2018-02-21) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpheBpWO 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpheBpWO 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpheBpWO', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.7s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpheBpWO', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.7s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpheBpWO/proc'] 0m1.7s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpheBpWO/proc'] 0m1.7s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/pts'] 0m1.8s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/pts'] 0m1.8s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/ptmx'] 0m1.8s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/ptmx'] 0m1.8s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/console'] 0m1.8s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/console'] 0m1.8s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpheBpWO/run/shm'] 0m1.8s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpheBpWO/run/shm'] 0m1.8s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ wheezy main 0m1.8s DEBUG: Created policy-rc.d and chmodded it. 0m1.8s DEBUG: Created resolv.conf. 0m1.8s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpheBpWO/tmp/scripts/ 0m1.8s DEBUG: Copying scriptsdir /etc/piuparts/scripts-wheezy to /srv/piuparts.debian.org/tmp/tmpheBpWO/tmp/scripts/ 0m1.8s INFO: Running scripts post_chroot_unpack 0m1.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', 'update'] 0m3.4s DUMP: Hit http://mirror-ubc.debian.org wheezy Release.gpg Hit http://mirror-ubc.debian.org wheezy Release Hit http://mirror-ubc.debian.org wheezy/main amd64 Packages Hit http://mirror-ubc.debian.org wheezy/main Translation-en Reading package lists... 0m3.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', 'update'] 0m3.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-yf', 'dist-upgrade'] 0m3.6s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-yf', 'dist-upgrade'] 0m3.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s DUMP: 0c96df6df725ee7ec7aebd2b6a77fb72 - 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s INFO: Running scripts post_setup 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_dummy_users'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_dummy_users'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_forbid_home'] 0m4.3s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_forbid_home'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.3s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' `/bin/sync' -> `true' 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_minimize'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_minimize'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m5.0s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 335 kB of archives. After this operation, 1327 kB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main adduser all 3.113+nmu3 [264 kB] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main ucf all 3.0025+nmu3 [70.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 335 kB in 0s (22.4 MB/s) Selecting previously unselected package adduser. (Reading database ... 6639 files and directories currently installed.) Unpacking adduser (from .../adduser_3.113+nmu3_all.deb) ... Selecting previously unselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ... Moving old data out of the way Setting up adduser (3.113+nmu3) ... Setting up ucf (3.0025+nmu3) ... 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_zz_backports'] 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_setup_zz_backports'] 0m5.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.0s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u3 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u7 install ok installed gpgv gpgv 1.4.12-7+deb7u7 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u10 install ok installed libc6:amd64 libc6 2.13-38+deb7u10 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed login login 1:4.1.5.1-1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u10 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1 install ok installed perl-base perl-base 5.14.2-21+deb7u3 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1 install ok installed tzdata tzdata 2016d-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m5.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.0s DEBUG: Loading chroot meta data from reference-chroot-metadata.dat 0m5.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m6.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m6.2s INFO: Running scripts is_testable 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/is_testable_uninstallable'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/is_testable_uninstallable'] 0m6.2s INFO: Running scripts pre_test 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_test_exceptions'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_test_exceptions'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_test_root_password'] 0m6.2s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_test_root_password'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'show', 'circos-tools'] 0m6.3s DUMP: Package: circos-tools Version: 0.16-2 Installed-Size: 19386 Maintainer: Debian Med Packaging Team Architecture: all Depends: perl, circos Pre-Depends: dpkg (>= 1.15.6) Description-en: Helper tools for Circos Circos visualizes data in a circular layout ?? this makes Circos ideal for exploring relationships between objects or positions. . This package contains the following helper tools designed to aid you in processing your data: binlinks, bundlelinks, categoryviewer, colorinterpolate filterlinks, maketutorialimages, orderchr, randomlinks, resample, tableviewer. Homepage: http://circos.ca/ Description-md5: cf9d54120046a32febcd05fb72c7b3bd Tag: field::biology:bioinformatics, implemented-in::perl, role::program Section: science Priority: optional Filename: pool/main/c/circos-tools/circos-tools_0.16-2_all.deb Size: 8210438 MD5sum: 5698791a3da9ae428652a965018c5711 SHA1: fbbb322f7df50fb013f6a14af0573f56405c89ac SHA256: 43d8fa07f6e907921a9c138a74ae3395b793bada0aef86672b6403e2116dcfca 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'show', 'circos-tools'] 0m6.3s INFO: apt-cache knows about the following packages: circos-tools 0m6.3s INFO: Running scripts pre_install 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_database-server'] 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_database-server'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_exceptions'] 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_exceptions'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_extras'] 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_extras'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy'] 0m6.4s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy', 'circos-tools'] 0m6.5s DUMP: circos-tools: Installed: (none) Candidate: 0.16-2 Version table: 0.16-2 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy', 'circos-tools'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-y', 'install', 'circos-tools'] 0m11.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: circos fontconfig-config fonts-circos-symbols fonts-cmu libcarp-always-perl libclass-isa-perl libclone-perl libconfig-general-perl libdata-dumper-simple-perl libexpat1 libfile-basedir-perl libfilter-perl libfont-ttf-perl libfontconfig1 libfreetype6 libgd-gd2-perl libgd2-xpm libgdbm3 libgetopt-simple-perl libgraphics-colornames-perl libgraphics-colorobject-perl libio-all-perl libjpeg8 liblist-allutils-perl liblist-moreutils-perl libmath-bezier-perl libmath-round-perl libmath-vec-perl libmath-vecstat-perl libmodule-implementation-perl libmodule-runtime-perl libparams-classify-perl libparams-validate-perl libpng12-0 libreadonly-perl libregexp-common-perl libset-intspan-perl libspiffy-perl libswitch-perl libtext-format-perl libtry-tiny-perl libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxpm4 perl perl-modules ttf-dejavu-core Suggested packages: libcompress-zlib-perl libxml-parser-perl libgd-tools libdb-file-lock-perl libfile-readbackwards-perl libfreezethaw-perl libio-string-perl libmldbm-perl libscalar-number-perl perl-doc libterm-readline-gnu-perl libterm-readline-perl-perl make libpod-plainer-perl Recommended packages: libpod-coverage-perl libtest-pod-perl libreadonly-xs-perl netbase The following NEW packages will be installed: circos circos-tools fontconfig-config fonts-circos-symbols fonts-cmu libcarp-always-perl libclass-isa-perl libclone-perl libconfig-general-perl libdata-dumper-simple-perl libexpat1 libfile-basedir-perl libfilter-perl libfont-ttf-perl libfontconfig1 libfreetype6 libgd-gd2-perl libgd2-xpm libgdbm3 libgetopt-simple-perl libgraphics-colornames-perl libgraphics-colorobject-perl libio-all-perl libjpeg8 liblist-allutils-perl liblist-moreutils-perl libmath-bezier-perl libmath-round-perl libmath-vec-perl libmath-vecstat-perl libmodule-implementation-perl libmodule-runtime-perl libparams-classify-perl libparams-validate-perl libpng12-0 libreadonly-perl libregexp-common-perl libset-intspan-perl libspiffy-perl libswitch-perl libtext-format-perl libtry-tiny-perl libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxpm4 perl perl-modules ttf-dejavu-core 0 upgraded, 51 newly installed, 0 to remove and 0 not upgraded. Need to get 33.6 MB of archives. After this operation, 89.5 MB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main libgdbm3 amd64 1.8.3-11 [46.9 kB] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main libswitch-perl all 2.16-2 [21.0 kB] Get:3 http://mirror-ubc.debian.org/debian/ wheezy/main libclass-isa-perl all 0.36-3 [12.3 kB] Get:4 http://mirror-ubc.debian.org/debian/ wheezy/main perl-modules all 5.14.2-21+deb7u3 [3444 kB] Get:5 http://mirror-ubc.debian.org/debian/ wheezy/main perl amd64 5.14.2-21+deb7u3 [4429 kB] Get:6 http://mirror-ubc.debian.org/debian/ wheezy/main fonts-circos-symbols all 0.61-3 [22.3 kB] Get:7 http://mirror-ubc.debian.org/debian/ wheezy/main fonts-cmu all 0.7.0-2 [7583 kB] Get:8 http://mirror-ubc.debian.org/debian/ wheezy/main libregexp-common-perl all 2011121001-1 [169 kB] Get:9 http://mirror-ubc.debian.org/debian/ wheezy/main libcarp-always-perl all 0.11-1 [9068 B] Get:10 http://mirror-ubc.debian.org/debian/ wheezy/main libconfig-general-perl all 2.50-1 [70.9 kB] Get:11 http://mirror-ubc.debian.org/debian/ wheezy/main libdata-dumper-simple-perl all 0.11-4 [13.1 kB] Get:12 http://mirror-ubc.debian.org/debian/ wheezy/main libexpat1 amd64 2.1.0-1+deb7u2 [139 kB] Get:13 http://mirror-ubc.debian.org/debian/ wheezy/main libfreetype6 amd64 2.4.9-1.1+deb7u3 [452 kB] Get:14 http://mirror-ubc.debian.org/debian/ wheezy/main ttf-dejavu-core all 2.33-3 [1021 kB] Get:15 http://mirror-ubc.debian.org/debian/ wheezy/main fontconfig-config all 2.9.0-7.1 [233 kB] Get:16 http://mirror-ubc.debian.org/debian/ wheezy/main libfontconfig1 amd64 2.9.0-7.1 [300 kB] Get:17 http://mirror-ubc.debian.org/debian/ wheezy/main libjpeg8 amd64 8d-1+deb7u1 [138 kB] Get:18 http://mirror-ubc.debian.org/debian/ wheezy/main libpng12-0 amd64 1.2.49-1+deb7u2 [191 kB] Get:19 http://mirror-ubc.debian.org/debian/ wheezy/main libxau6 amd64 1:1.0.7-1 [18.8 kB] Get:20 http://mirror-ubc.debian.org/debian/ wheezy/main libxdmcp6 amd64 1:1.1.1-1 [26.3 kB] Get:21 http://mirror-ubc.debian.org/debian/ wheezy/main libxcb1 amd64 1.8.1-2+deb7u1 [50.2 kB] Get:22 http://mirror-ubc.debian.org/debian/ wheezy/main libx11-data all 2:1.5.0-1+deb7u2 [194 kB] Get:23 http://mirror-ubc.debian.org/debian/ wheezy/main libx11-6 amd64 2:1.5.0-1+deb7u2 [901 kB] Get:24 http://mirror-ubc.debian.org/debian/ wheezy/main libxpm4 amd64 1:3.5.10-1 [49.4 kB] Get:25 http://mirror-ubc.debian.org/debian/ wheezy/main libgd2-xpm amd64 2.0.36~rc1~dfsg-6.1+deb7u2 [234 kB] Get:26 http://mirror-ubc.debian.org/debian/ wheezy/main libgd-gd2-perl amd64 1:2.46-3+b1 [200 kB] Get:27 http://mirror-ubc.debian.org/debian/ wheezy/main libgetopt-simple-perl all 1.52-2 [13.8 kB] Get:28 http://mirror-ubc.debian.org/debian/ wheezy/main libmath-bezier-perl all 0.01-1 [7950 B] Get:29 http://mirror-ubc.debian.org/debian/ wheezy/main libmath-round-perl all 0.06-3 [9474 B] Get:30 http://mirror-ubc.debian.org/debian/ wheezy/main libparams-classify-perl amd64 0.013-4 [26.0 kB] Get:31 http://mirror-ubc.debian.org/debian/ wheezy/main libmodule-runtime-perl all 0.013-1 [17.8 kB] Get:32 http://mirror-ubc.debian.org/debian/ wheezy/main libtry-tiny-perl all 0.11-1 [18.0 kB] Get:33 http://mirror-ubc.debian.org/debian/ wheezy/main libmodule-implementation-perl all 0.06-1 [12.8 kB] Get:34 http://mirror-ubc.debian.org/debian/ wheezy/main libparams-validate-perl amd64 1.06-1 [67.4 kB] Get:35 http://mirror-ubc.debian.org/debian/ wheezy/main libreadonly-perl all 1.03-4 [19.9 kB] Get:36 http://mirror-ubc.debian.org/debian/ wheezy/main libset-intspan-perl all 1.16-1 [27.7 kB] Get:37 http://mirror-ubc.debian.org/debian/ wheezy/main liblist-moreutils-perl amd64 0.33-1+b1 [52.5 kB] Get:38 http://mirror-ubc.debian.org/debian/ wheezy/main liblist-allutils-perl all 0.03-1 [14.9 kB] Get:39 http://mirror-ubc.debian.org/debian/ wheezy/main libfile-basedir-perl all 0.03-1 [10.4 kB] Get:40 http://mirror-ubc.debian.org/debian/ wheezy/main libmath-vec-perl all 1.01-1 [18.2 kB] Get:41 http://mirror-ubc.debian.org/debian/ wheezy/main libfilter-perl amd64 1.45-1 [74.0 kB] Get:42 http://mirror-ubc.debian.org/debian/ wheezy/main libspiffy-perl all 0.30-1 [25.9 kB] Get:43 http://mirror-ubc.debian.org/debian/ wheezy/main libio-all-perl all 0.44-1 [71.6 kB] Get:44 http://mirror-ubc.debian.org/debian/ wheezy/main libmath-vecstat-perl all 0.08-1 [9148 B] Get:45 http://mirror-ubc.debian.org/debian/ wheezy/main libgraphics-colornames-perl all 2.11-4 [41.2 kB] Get:46 http://mirror-ubc.debian.org/debian/ wheezy/main libgraphics-colorobject-perl all 0.5.0-4 [33.2 kB] Get:47 http://mirror-ubc.debian.org/debian/ wheezy/main libtext-format-perl all 0.56-1 [20.3 kB] Get:48 http://mirror-ubc.debian.org/debian/ wheezy/main libfont-ttf-perl all 0.48-1 [332 kB] Get:49 http://mirror-ubc.debian.org/debian/ wheezy/main libclone-perl amd64 0.31-1+b2 [13.3 kB] Get:50 http://mirror-ubc.debian.org/debian/ wheezy/main circos all 0.61-3 [4512 kB] Get:51 http://mirror-ubc.debian.org/debian/ wheezy/main circos-tools all 0.16-2 [8210 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 33.6 MB in 1s (24.0 MB/s) Selecting previously unselected package libgdbm3:amd64. (Reading database ... 6768 files and directories currently installed.) Unpacking libgdbm3:amd64 (from .../libgdbm3_1.8.3-11_amd64.deb) ... Selecting previously unselected package libswitch-perl. Unpacking libswitch-perl (from .../libswitch-perl_2.16-2_all.deb) ... Selecting previously unselected package libclass-isa-perl. Unpacking libclass-isa-perl (from .../libclass-isa-perl_0.36-3_all.deb) ... Selecting previously unselected package perl-modules. Unpacking perl-modules (from .../perl-modules_5.14.2-21+deb7u3_all.deb) ... Selecting previously unselected package perl. Unpacking perl (from .../perl_5.14.2-21+deb7u3_amd64.deb) ... Selecting previously unselected package fonts-circos-symbols. Unpacking fonts-circos-symbols (from .../fonts-circos-symbols_0.61-3_all.deb) ... Selecting previously unselected package fonts-cmu. Unpacking fonts-cmu (from .../fonts-cmu_0.7.0-2_all.deb) ... Selecting previously unselected package libregexp-common-perl. Unpacking libregexp-common-perl (from .../libregexp-common-perl_2011121001-1_all.deb) ... Selecting previously unselected package libcarp-always-perl. Unpacking libcarp-always-perl (from .../libcarp-always-perl_0.11-1_all.deb) ... Selecting previously unselected package libconfig-general-perl. Unpacking libconfig-general-perl (from .../libconfig-general-perl_2.50-1_all.deb) ... Selecting previously unselected package libdata-dumper-simple-perl. Unpacking libdata-dumper-simple-perl (from .../libdata-dumper-simple-perl_0.11-4_all.deb) ... Selecting previously unselected package libexpat1:amd64. Unpacking libexpat1:amd64 (from .../libexpat1_2.1.0-1+deb7u2_amd64.deb) ... Selecting previously unselected package libfreetype6:amd64. Unpacking libfreetype6:amd64 (from .../libfreetype6_2.4.9-1.1+deb7u3_amd64.deb) ... Selecting previously unselected package ttf-dejavu-core. Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-3_all.deb) ... Selecting previously unselected package fontconfig-config. Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ... Selecting previously unselected package libfontconfig1:amd64. Unpacking libfontconfig1:amd64 (from .../libfontconfig1_2.9.0-7.1_amd64.deb) ... Selecting previously unselected package libjpeg8:amd64. Unpacking libjpeg8:amd64 (from .../libjpeg8_8d-1+deb7u1_amd64.deb) ... Selecting previously unselected package libpng12-0:amd64. Unpacking libpng12-0:amd64 (from .../libpng12-0_1.2.49-1+deb7u2_amd64.deb) ... Selecting previously unselected package libxau6:amd64. Unpacking libxau6:amd64 (from .../libxau6_1%3a1.0.7-1_amd64.deb) ... Selecting previously unselected package libxdmcp6:amd64. Unpacking libxdmcp6:amd64 (from .../libxdmcp6_1%3a1.1.1-1_amd64.deb) ... Selecting previously unselected package libxcb1:amd64. Unpacking libxcb1:amd64 (from .../libxcb1_1.8.1-2+deb7u1_amd64.deb) ... Selecting previously unselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1+deb7u2_all.deb) ... Selecting previously unselected package libx11-6:amd64. Unpacking libx11-6:amd64 (from .../libx11-6_2%3a1.5.0-1+deb7u2_amd64.deb) ... Selecting previously unselected package libxpm4:amd64. Unpacking libxpm4:amd64 (from .../libxpm4_1%3a3.5.10-1_amd64.deb) ... Selecting previously unselected package libgd2-xpm:amd64. Unpacking libgd2-xpm:amd64 (from .../libgd2-xpm_2.0.36~rc1~dfsg-6.1+deb7u2_amd64.deb) ... Selecting previously unselected package libgd-gd2-perl. Unpacking libgd-gd2-perl (from .../libgd-gd2-perl_1%3a2.46-3+b1_amd64.deb) ... Selecting previously unselected package libgetopt-simple-perl. Unpacking libgetopt-simple-perl (from .../libgetopt-simple-perl_1.52-2_all.deb) ... Selecting previously unselected package libmath-bezier-perl. Unpacking libmath-bezier-perl (from .../libmath-bezier-perl_0.01-1_all.deb) ... Selecting previously unselected package libmath-round-perl. Unpacking libmath-round-perl (from .../libmath-round-perl_0.06-3_all.deb) ... Selecting previously unselected package libparams-classify-perl. Unpacking libparams-classify-perl (from .../libparams-classify-perl_0.013-4_amd64.deb) ... Selecting previously unselected package libmodule-runtime-perl. Unpacking libmodule-runtime-perl (from .../libmodule-runtime-perl_0.013-1_all.deb) ... Selecting previously unselected package libtry-tiny-perl. Unpacking libtry-tiny-perl (from .../libtry-tiny-perl_0.11-1_all.deb) ... Selecting previously unselected package libmodule-implementation-perl. Unpacking libmodule-implementation-perl (from .../libmodule-implementation-perl_0.06-1_all.deb) ... Selecting previously unselected package libparams-validate-perl. Unpacking libparams-validate-perl (from .../libparams-validate-perl_1.06-1_amd64.deb) ... Selecting previously unselected package libreadonly-perl. Unpacking libreadonly-perl (from .../libreadonly-perl_1.03-4_all.deb) ... Selecting previously unselected package libset-intspan-perl. Unpacking libset-intspan-perl (from .../libset-intspan-perl_1.16-1_all.deb) ... Selecting previously unselected package liblist-moreutils-perl. Unpacking liblist-moreutils-perl (from .../liblist-moreutils-perl_0.33-1+b1_amd64.deb) ... Selecting previously unselected package liblist-allutils-perl. Unpacking liblist-allutils-perl (from .../liblist-allutils-perl_0.03-1_all.deb) ... Selecting previously unselected package libfile-basedir-perl. Unpacking libfile-basedir-perl (from .../libfile-basedir-perl_0.03-1_all.deb) ... Selecting previously unselected package libmath-vec-perl. Unpacking libmath-vec-perl (from .../libmath-vec-perl_1.01-1_all.deb) ... Selecting previously unselected package libfilter-perl. Unpacking libfilter-perl (from .../libfilter-perl_1.45-1_amd64.deb) ... Selecting previously unselected package libspiffy-perl. Unpacking libspiffy-perl (from .../libspiffy-perl_0.30-1_all.deb) ... Selecting previously unselected package libio-all-perl. Unpacking libio-all-perl (from .../libio-all-perl_0.44-1_all.deb) ... Selecting previously unselected package libmath-vecstat-perl. Unpacking libmath-vecstat-perl (from .../libmath-vecstat-perl_0.08-1_all.deb) ... Selecting previously unselected package libgraphics-colornames-perl. Unpacking libgraphics-colornames-perl (from .../libgraphics-colornames-perl_2.11-4_all.deb) ... Selecting previously unselected package libgraphics-colorobject-perl. Unpacking libgraphics-colorobject-perl (from .../libgraphics-colorobject-perl_0.5.0-4_all.deb) ... Selecting previously unselected package libtext-format-perl. Unpacking libtext-format-perl (from .../libtext-format-perl_0.56-1_all.deb) ... Selecting previously unselected package libfont-ttf-perl. Unpacking libfont-ttf-perl (from .../libfont-ttf-perl_0.48-1_all.deb) ... Selecting previously unselected package libclone-perl. Unpacking libclone-perl (from .../libclone-perl_0.31-1+b2_amd64.deb) ... Selecting previously unselected package circos. Unpacking circos (from .../archives/circos_0.61-3_all.deb) ... Selecting previously unselected package circos-tools. Unpacking circos-tools (from .../circos-tools_0.16-2_all.deb) ... Setting up libgdbm3:amd64 (1.8.3-11) ... Setting up libclass-isa-perl (0.36-3) ... Setting up fonts-circos-symbols (0.61-3) ... Setting up fonts-cmu (0.7.0-2) ... Setting up libexpat1:amd64 (2.1.0-1+deb7u2) ... Setting up libfreetype6:amd64 (2.4.9-1.1+deb7u3) ... Setting up ttf-dejavu-core (2.33-3) ... Setting up fontconfig-config (2.9.0-7.1) ... Setting up libfontconfig1:amd64 (2.9.0-7.1) ... Setting up libjpeg8:amd64 (8d-1+deb7u1) ... Setting up libpng12-0:amd64 (1.2.49-1+deb7u2) ... Setting up libxau6:amd64 (1:1.0.7-1) ... Setting up libxdmcp6:amd64 (1:1.1.1-1) ... Setting up libxcb1:amd64 (1.8.1-2+deb7u1) ... Setting up libx11-data (2:1.5.0-1+deb7u2) ... Setting up libx11-6:amd64 (2:1.5.0-1+deb7u2) ... Setting up libxpm4:amd64 (1:3.5.10-1) ... Setting up libgd2-xpm:amd64 (2.0.36~rc1~dfsg-6.1+deb7u2) ... Setting up libswitch-perl (2.16-2) ... Setting up perl-modules (5.14.2-21+deb7u3) ... Setting up perl (5.14.2-21+deb7u3) ... update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode Setting up libregexp-common-perl (2011121001-1) ... Setting up libcarp-always-perl (0.11-1) ... Setting up libconfig-general-perl (2.50-1) ... Setting up libdata-dumper-simple-perl (0.11-4) ... Setting up libgd-gd2-perl (1:2.46-3+b1) ... Setting up libgetopt-simple-perl (1.52-2) ... Setting up libmath-bezier-perl (0.01-1) ... Setting up libmath-round-perl (0.06-3) ... Setting up libparams-classify-perl (0.013-4) ... Setting up libmodule-runtime-perl (0.013-1) ... Setting up libtry-tiny-perl (0.11-1) ... Setting up libmodule-implementation-perl (0.06-1) ... Setting up libparams-validate-perl (1.06-1) ... Setting up libreadonly-perl (1.03-4) ... Setting up libset-intspan-perl (1.16-1) ... Setting up liblist-moreutils-perl (0.33-1+b1) ... Setting up liblist-allutils-perl (0.03-1) ... Setting up libfile-basedir-perl (0.03-1) ... Setting up libmath-vec-perl (1.01-1) ... Setting up libfilter-perl (1.45-1) ... Setting up libspiffy-perl (0.30-1) ... Setting up libio-all-perl (0.44-1) ... Setting up libmath-vecstat-perl (0.08-1) ... Setting up libgraphics-colornames-perl (2.11-4) ... Setting up libgraphics-colorobject-perl (0.5.0-4) ... Setting up libtext-format-perl (0.56-1) ... Setting up libfont-ttf-perl (0.48-1) ... Setting up libclone-perl (0.31-1+b2) ... Setting up circos (0.61-3) ... Setting up circos-tools (0.16-2) ... 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-y', 'install', 'circos-tools'] 0m11.2s INFO: Running scripts post_install 0m11.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_install_exceptions'] 0m11.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_install_exceptions'] 0m11.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m11.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m11.7s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpheBpWO to wheezy-lts 0m11.7s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ wheezy main deb http://security.debian.org wheezy/updates main 0m11.7s INFO: Running scripts pre_distupgrade 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_wheezy'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_wheezy'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', 'update'] 0m13.5s DUMP: Hit http://mirror-ubc.debian.org wheezy Release.gpg Hit http://mirror-ubc.debian.org wheezy Release Hit http://mirror-ubc.debian.org wheezy/main amd64 Packages Hit http://mirror-ubc.debian.org wheezy/main Translation-en Get:1 http://security.debian.org wheezy/updates Release.gpg [1601 B] Get:2 http://security.debian.org wheezy/updates Release [39.0 kB] Get:3 http://security.debian.org wheezy/updates/main amd64 Packages [613 kB] Get:4 http://security.debian.org wheezy/updates/main Translation-en [335 kB] Fetched 988 kB in 0s (1059 kB/s) Reading package lists... 0m13.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', 'update'] 0m13.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-yf', 'dist-upgrade'] 0m19.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: bash fontconfig-config gnupg gpgv libc-bin libc6 libdb5.1 libexpat1 libfontconfig1 libfreetype6 libgd2-xpm libx11-6 libx11-data libxpm4 login multiarch-support passwd perl perl-base perl-modules sensible-utils tar tzdata 23 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 25.7 MB of archives. After this operation, 829 kB of additional disk space will be used. Get:1 http://security.debian.org/ wheezy/updates/main bash amd64 4.2+dfsg-0.1+deb7u4 [1499 kB] Get:2 http://security.debian.org/ wheezy/updates/main login amd64 1:4.1.5.1-1+deb7u1 [984 kB] Get:3 http://security.debian.org/ wheezy/updates/main perl amd64 5.14.2-21+deb7u5 [4434 kB] Get:4 http://security.debian.org/ wheezy/updates/main perl-base amd64 5.14.2-21+deb7u5 [1534 kB] Get:5 http://security.debian.org/ wheezy/updates/main perl-modules all 5.14.2-21+deb7u5 [3441 kB] Get:6 http://security.debian.org/ wheezy/updates/main libc-bin amd64 2.13-38+deb7u12 [1275 kB] Get:7 http://security.debian.org/ wheezy/updates/main libc6 amd64 2.13-38+deb7u12 [4226 kB] Get:8 http://security.debian.org/ wheezy/updates/main libdb5.1 amd64 5.1.29-5+deb7u1 [723 kB] Get:9 http://security.debian.org/ wheezy/updates/main tar amd64 1.26+dfsg-0.1+deb7u1 [984 kB] Get:10 http://security.debian.org/ wheezy/updates/main libexpat1 amd64 2.1.0-1+deb7u5 [139 kB] Get:11 http://security.debian.org/ wheezy/updates/main libfreetype6 amd64 2.4.9-1.1+deb7u7 [454 kB] Get:12 http://security.debian.org/ wheezy/updates/main libfontconfig1 amd64 2.9.0-7.1+deb7u1 [300 kB] Get:13 http://security.debian.org/ wheezy/updates/main fontconfig-config all 2.9.0-7.1+deb7u1 [233 kB] Get:14 http://security.debian.org/ wheezy/updates/main libx11-data all 2:1.5.0-1+deb7u4 [189 kB] Get:15 http://security.debian.org/ wheezy/updates/main libx11-6 amd64 2:1.5.0-1+deb7u4 [902 kB] Get:16 http://security.debian.org/ wheezy/updates/main libxpm4 amd64 1:3.5.10-1+deb7u1 [50.4 kB] Get:17 http://security.debian.org/ wheezy/updates/main libgd2-xpm amd64 2.0.36~rc1~dfsg-6.1+deb7u11 [236 kB] Get:18 http://security.debian.org/ wheezy/updates/main gpgv amd64 1.4.12-7+deb7u9 [229 kB] Get:19 http://security.debian.org/ wheezy/updates/main gnupg amd64 1.4.12-7+deb7u9 [1954 kB] Get:20 http://security.debian.org/ wheezy/updates/main passwd amd64 1:4.1.5.1-1+deb7u1 [1262 kB] Get:21 http://security.debian.org/ wheezy/updates/main sensible-utils all 0.0.7+deb7u1 [9000 B] Get:22 http://security.debian.org/ wheezy/updates/main tzdata all 2018c-0+deb7u1 [496 kB] Get:23 http://security.debian.org/ wheezy/updates/main multiarch-support amd64 2.13-38+deb7u12 [152 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.7 MB in 1s (14.3 MB/s) (Reading database ... 9673 files and directories currently installed.) Preparing to replace bash 4.2+dfsg-0.1+deb7u3 (using .../bash_4.2+dfsg-0.1+deb7u4_amd64.deb) ... Unpacking replacement bash ... Setting up bash (4.2+dfsg-0.1+deb7u4) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 9673 files and directories currently installed.) Preparing to replace login 1:4.1.5.1-1 (using .../login_1%3a4.1.5.1-1+deb7u1_amd64.deb) ... Unpacking replacement login ... Setting up login (1:4.1.5.1-1+deb7u1) ... (Reading database ... 9673 files and directories currently installed.) Preparing to replace perl 5.14.2-21+deb7u3 (using .../perl_5.14.2-21+deb7u5_amd64.deb) ... Unpacking replacement perl ... Preparing to replace perl-base 5.14.2-21+deb7u3 (using .../perl-base_5.14.2-21+deb7u5_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.14.2-21+deb7u5) ... (Reading database ... 9673 files and directories currently installed.) Preparing to replace perl-modules 5.14.2-21+deb7u3 (using .../perl-modules_5.14.2-21+deb7u5_all.deb) ... Unpacking replacement perl-modules ... Preparing to replace libc-bin 2.13-38+deb7u10 (using .../libc-bin_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-38+deb7u12) ... (Reading database ... 9674 files and directories currently installed.) Preparing to replace libc6:amd64 2.13-38+deb7u10 (using .../libc6_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc6:amd64 ... Setting up libc6:amd64 (2.13-38+deb7u12) ... (Reading database ... 9674 files and directories currently installed.) Preparing to replace libdb5.1:amd64 5.1.29-5 (using .../libdb5.1_5.1.29-5+deb7u1_amd64.deb) ... Unpacking replacement libdb5.1:amd64 ... Setting up libdb5.1:amd64 (5.1.29-5+deb7u1) ... (Reading database ... 9674 files and directories currently installed.) Preparing to replace tar 1.26+dfsg-0.1 (using .../tar_1.26+dfsg-0.1+deb7u1_amd64.deb) ... Unpacking replacement tar ... Setting up tar (1.26+dfsg-0.1+deb7u1) ... (Reading database ... 9674 files and directories currently installed.) Preparing to replace libexpat1:amd64 2.1.0-1+deb7u2 (using .../libexpat1_2.1.0-1+deb7u5_amd64.deb) ... Unpacking replacement libexpat1:amd64 ... Preparing to replace libfreetype6:amd64 2.4.9-1.1+deb7u3 (using .../libfreetype6_2.4.9-1.1+deb7u7_amd64.deb) ... Unpacking replacement libfreetype6:amd64 ... Preparing to replace libfontconfig1:amd64 2.9.0-7.1 (using .../libfontconfig1_2.9.0-7.1+deb7u1_amd64.deb) ... Unpacking replacement libfontconfig1:amd64 ... Preparing to replace fontconfig-config 2.9.0-7.1 (using .../fontconfig-config_2.9.0-7.1+deb7u1_all.deb) ... Unpacking replacement fontconfig-config ... Preparing to replace libx11-data 2:1.5.0-1+deb7u2 (using .../libx11-data_2%3a1.5.0-1+deb7u4_all.deb) ... Unpacking replacement libx11-data ... Preparing to replace libx11-6:amd64 2:1.5.0-1+deb7u2 (using .../libx11-6_2%3a1.5.0-1+deb7u4_amd64.deb) ... Unpacking replacement libx11-6:amd64 ... Preparing to replace libxpm4:amd64 1:3.5.10-1 (using .../libxpm4_1%3a3.5.10-1+deb7u1_amd64.deb) ... Unpacking replacement libxpm4:amd64 ... Preparing to replace libgd2-xpm:amd64 2.0.36~rc1~dfsg-6.1+deb7u2 (using .../libgd2-xpm_2.0.36~rc1~dfsg-6.1+deb7u11_amd64.deb) ... Unpacking replacement libgd2-xpm:amd64 ... Preparing to replace gpgv 1.4.12-7+deb7u7 (using .../gpgv_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.12-7+deb7u9) ... (Reading database ... 9674 files and directories currently installed.) Preparing to replace gnupg 1.4.12-7+deb7u7 (using .../gnupg_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.12-7+deb7u9) ... (Reading database ... 9674 files and directories currently installed.) Preparing to replace passwd 1:4.1.5.1-1 (using .../passwd_1%3a4.1.5.1-1+deb7u1_amd64.deb) ... Unpacking replacement passwd ... Setting up passwd (1:4.1.5.1-1+deb7u1) ... (Reading database ... 9674 files and directories currently installed.) Preparing to replace sensible-utils 0.0.7 (using .../sensible-utils_0.0.7+deb7u1_all.deb) ... Unpacking replacement sensible-utils ... Setting up sensible-utils (0.0.7+deb7u1) ... (Reading database ... 9674 files and directories currently installed.) Preparing to replace tzdata 2016d-0+deb7u1 (using .../tzdata_2018c-0+deb7u1_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2018c-0+deb7u1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Feb 28 13:02:17 UTC 2018. Universal Time is now: Wed Feb 28 13:02:17 UTC 2018. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 9686 files and directories currently installed.) Preparing to replace multiarch-support 2.13-38+deb7u10 (using .../multiarch-support_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.13-38+deb7u12) ... Setting up libexpat1:amd64 (2.1.0-1+deb7u5) ... Setting up libfreetype6:amd64 (2.4.9-1.1+deb7u7) ... Setting up fontconfig-config (2.9.0-7.1+deb7u1) ... Setting up libfontconfig1:amd64 (2.9.0-7.1+deb7u1) ... Setting up libx11-data (2:1.5.0-1+deb7u4) ... Setting up libx11-6:amd64 (2:1.5.0-1+deb7u4) ... Setting up libxpm4:amd64 (1:3.5.10-1+deb7u1) ... Setting up libgd2-xpm:amd64 (2.0.36~rc1~dfsg-6.1+deb7u11) ... Setting up perl-modules (5.14.2-21+deb7u5) ... Setting up perl (5.14.2-21+deb7u5) ... 0m19.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-yf', 'dist-upgrade'] 0m19.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m19.7s DUMP: aa070cad8b3a1132a337357ab1f6d822 - 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'show', 'circos-tools'] 0m19.7s DUMP: Package: circos-tools Version: 0.16-2 Installed-Size: 19386 Maintainer: Debian Med Packaging Team Architecture: all Depends: perl, circos Pre-Depends: dpkg (>= 1.15.6) Description-en: Helper tools for Circos Circos visualizes data in a circular layout ?? this makes Circos ideal for exploring relationships between objects or positions. . This package contains the following helper tools designed to aid you in processing your data: binlinks, bundlelinks, categoryviewer, colorinterpolate filterlinks, maketutorialimages, orderchr, randomlinks, resample, tableviewer. Homepage: http://circos.ca/ Description-md5: cf9d54120046a32febcd05fb72c7b3bd Tag: field::biology:bioinformatics, implemented-in::perl, role::program Section: science Priority: optional Filename: pool/main/c/circos-tools/circos-tools_0.16-2_all.deb Size: 8210438 MD5sum: 5698791a3da9ae428652a965018c5711 SHA1: fbbb322f7df50fb013f6a14af0573f56405c89ac SHA256: 43d8fa07f6e907921a9c138a74ae3395b793bada0aef86672b6403e2116dcfca 0m19.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'show', 'circos-tools'] 0m19.7s INFO: apt-cache knows about the following packages: circos-tools 0m19.7s INFO: Running scripts pre_install 0m19.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_database-server'] 0m19.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_database-server'] 0m19.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_exceptions'] 0m19.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_exceptions'] 0m19.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_extras'] 0m19.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_extras'] 0m19.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture'] 0m19.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture'] 0m19.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m19.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m19.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy'] 0m19.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main Translation-en 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy'] 0m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy', 'circos-tools'] 0m19.9s DUMP: circos-tools: Installed: 0.16-2 Candidate: 0.16-2 Version table: *** 0.16-2 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 100 /var/lib/dpkg/status 0m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy', 'circos-tools'] 0m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-y', 'install', 'circos-tools'] 0m20.2s DUMP: Reading package lists... Building dependency tree... Reading state information... circos-tools is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-y', 'install', 'circos-tools'] 0m20.2s INFO: Running scripts post_install 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_install_exceptions'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_install_exceptions'] 0m20.2s INFO: Running scripts post_distupgrade 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_exceptions'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_exceptions'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m20.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_zz_backports'] 0m20.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_distupgrade_zz_backports'] 0m20.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m20.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m20.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m21.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m21.2s INFO: Running scripts pre_install 0m21.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_database-server'] 0m21.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_database-server'] 0m21.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_exceptions'] 0m21.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_exceptions'] 0m21.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_extras'] 0m21.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_extras'] 0m21.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture'] 0m21.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture'] 0m21.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m21.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m21.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy'] 0m21.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main Translation-en 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m21.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy'] 0m21.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy', 'circos-tools'] 0m21.3s DUMP: circos-tools: Installed: 0.16-2 Candidate: 0.16-2 Version table: *** 0.16-2 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 100 /var/lib/dpkg/status 0m21.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-cache', 'policy', 'circos-tools'] 0m21.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-y', 'install', 'circos-tools=0.16-2'] 0m21.6s DUMP: Reading package lists... Building dependency tree... Reading state information... circos-tools is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', '-y', 'install', 'circos-tools=0.16-2'] 0m21.6s INFO: Running scripts post_install 0m21.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_install_exceptions'] 0m21.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_install_exceptions'] 0m21.6s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m22.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m22.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m22.3s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u4 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed circos circos 0.61-3 install ok installed circos-tools circos-tools 0.16-2 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed fontconfig-config fontconfig-config 2.9.0-7.1+deb7u1 install ok installed fonts-circos-symbols fonts-circos-symbols 0.61-3 install ok installed fonts-cmu fonts-cmu 0.7.0-2 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u9 install ok installed gpgv gpgv 1.4.12-7+deb7u9 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u12 install ok installed libc6:amd64 libc6 2.13-38+deb7u12 install ok installed libcarp-always-perl libcarp-always-perl 0.11-1 install ok installed libclass-isa-perl libclass-isa-perl 0.36-3 install ok installed libclone-perl libclone-perl 0.31-1+b2 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libconfig-general-perl libconfig-general-perl 2.50-1 install ok installed libdata-dumper-simple-perl libdata-dumper-simple-perl 0.11-4 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5+deb7u1 install ok installed libexpat1:amd64 libexpat1 2.1.0-1+deb7u5 install ok installed libfile-basedir-perl libfile-basedir-perl 0.03-1 install ok installed libfilter-perl libfilter-perl 1.45-1 install ok installed libfont-ttf-perl libfont-ttf-perl 0.48-1 install ok installed libfontconfig1:amd64 libfontconfig1 2.9.0-7.1+deb7u1 install ok installed libfreetype6:amd64 libfreetype6 2.4.9-1.1+deb7u7 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed libgd-gd2-perl libgd-gd2-perl 1:2.46-3+b1 install ok installed libgd2-xpm:amd64 libgd2-xpm 2.0.36~rc1~dfsg-6.1+deb7u11 install ok installed libgdbm3:amd64 libgdbm3 1.8.3-11 install ok installed libgetopt-simple-perl libgetopt-simple-perl 1.52-2 install ok installed libgraphics-colornames-perl libgraphics-colornames-perl 2.11-4 install ok installed libgraphics-colorobject-perl libgraphics-colorobject-perl 0.5.0-4 install ok installed libio-all-perl libio-all-perl 0.44-1 install ok installed libjpeg8:amd64 libjpeg8 8d-1+deb7u1 install ok installed liblist-allutils-perl liblist-allutils-perl 0.03-1 install ok installed liblist-moreutils-perl liblist-moreutils-perl 0.33-1+b1 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmath-bezier-perl libmath-bezier-perl 0.01-1 install ok installed libmath-round-perl libmath-round-perl 0.06-3 install ok installed libmath-vec-perl libmath-vec-perl 1.01-1 install ok installed libmath-vecstat-perl libmath-vecstat-perl 0.08-1 install ok installed libmodule-implementation-perl libmodule-implementation-perl 0.06-1 install ok installed libmodule-runtime-perl libmodule-runtime-perl 0.013-1 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libparams-classify-perl libparams-classify-perl 0.013-4 install ok installed libparams-validate-perl libparams-validate-perl 1.06-1 install ok installed libpng12-0:amd64 libpng12-0 1.2.49-1+deb7u2 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libreadonly-perl libreadonly-perl 1.03-4 install ok installed libregexp-common-perl libregexp-common-perl 2011121001-1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libset-intspan-perl libset-intspan-perl 1.16-1 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libspiffy-perl libspiffy-perl 0.30-1 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libswitch-perl libswitch-perl 2.16-2 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-format-perl libtext-format-perl 0.56-1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libtry-tiny-perl libtry-tiny-perl 0.11-1 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed libx11-6:amd64 libx11-6 2:1.5.0-1+deb7u4 install ok installed libx11-data libx11-data 2:1.5.0-1+deb7u4 install ok installed libxau6:amd64 libxau6 1:1.0.7-1 install ok installed libxcb1:amd64 libxcb1 1.8.1-2+deb7u1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.1-1 install ok installed libxpm4:amd64 libxpm4 1:3.5.10-1+deb7u1 install ok installed login login 1:4.1.5.1-1+deb7u1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u12 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1+deb7u1 install ok installed perl perl 5.14.2-21+deb7u5 install ok installed perl-base perl-base 5.14.2-21+deb7u5 install ok installed perl-modules perl-modules 5.14.2-21+deb7u5 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7+deb7u1 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1+deb7u1 install ok installed ttf-dejavu-core ttf-dejavu-core 2.33-3 install ok installed tzdata tzdata 2018c-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m22.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m23.0s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpheBpWO', '-ac', '--ignore-obsolete'] 0m24.0s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpheBpWO', '-ac', '--ignore-obsolete'] 0m24.0s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m24.0s DUMP: 0.15.1 0m24.0s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m24.0s INFO: Running adequate version 0.15.1 now. 0m24.0s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'circos-tools'] 0m24.1s DUMP: circos-tools: broken-symlink /usr/share/doc/circos/filterlinks.html -> /tools/filterlinks/doc/filterlinks.html circos-tools: broken-symlink /usr/share/doc/circos/README.tableviewer -> /tools/tableviewer/README circos-tools: broken-symlink /usr/share/doc/circos/bundlelinks.html -> /tools/bundlelinks/doc/bundlelinks.html circos-tools: broken-symlink /usr/share/doc/circos/orderchr.html -> /tools/orderchr/doc/orderchr.html 0m24.1s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'circos-tools'] 0m24.1s ERROR: WARN: Inadequate results from running adequate! circos-tools: broken-symlink /usr/share/doc/circos/filterlinks.html -> /tools/filterlinks/doc/filterlinks.html circos-tools: broken-symlink /usr/share/doc/circos/README.tableviewer -> /tools/tableviewer/README circos-tools: broken-symlink /usr/share/doc/circos/bundlelinks.html -> /tools/bundlelinks/doc/bundlelinks.html circos-tools: broken-symlink /usr/share/doc/circos/orderchr.html -> /tools/orderchr/doc/orderchr.html 0m24.1s ERROR: WARN: Running adequate resulted in less interesting tags found: broken-symlink 0m24.1s INFO: Running scripts pre_remove 0m24.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m24.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m24.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m24.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m24.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m25.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m25.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m25.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m25.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_exceptions'] 0m25.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/pre_remove_exceptions'] 0m25.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', 'remove', 'libdata-dumper-simple-perl', 'libx11-data', 'libgd-gd2-perl', 'libfreetype6:amd64', 'libmath-round-perl', 'libx11-6:amd64', 'libmath-bezier-perl', 'libclone-perl', 'libjpeg8:amd64', 'libset-intspan-perl', 'liblist-allutils-perl', 'libclass-isa-perl', 'libtext-format-perl', 'libfont-ttf-perl', 'libswitch-perl', 'libgdbm3:amd64', 'perl', 'libgetopt-simple-perl', 'fonts-cmu', 'libregexp-common-perl', 'libparams-classify-perl', 'fonts-circos-symbols', 'libconfig-general-perl', 'libgd2-xpm:amd64', 'libparams-validate-perl', 'libfile-basedir-perl', 'libmath-vecstat-perl', 'libspiffy-perl', 'libgraphics-colornames-perl', 'libxdmcp6:amd64', 'libexpat1:amd64', 'libxau6:amd64', 'libtry-tiny-perl', 'libfilter-perl', 'perl-modules', 'libgraphics-colorobject-perl', 'libpng12-0:amd64', 'libxpm4:amd64', 'libxcb1:amd64', 'libmodule-implementation-perl', 'libcarp-always-perl', 'ttf-dejavu-core', 'libreadonly-perl', 'liblist-moreutils-perl', 'libio-all-perl', 'libfontconfig1:amd64', 'fontconfig-config', 'circos', 'libmath-vec-perl', 'libmodule-runtime-perl', 'circos-tools'] 0m25.6s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: circos circos-tools fontconfig-config fonts-circos-symbols fonts-cmu libcarp-always-perl libclass-isa-perl libclone-perl libconfig-general-perl libdata-dumper-simple-perl libexpat1 libfile-basedir-perl libfilter-perl libfont-ttf-perl libfontconfig1 libfreetype6 libgd-gd2-perl libgd2-xpm libgdbm3 libgetopt-simple-perl libgraphics-colornames-perl libgraphics-colorobject-perl libio-all-perl libjpeg8 liblist-allutils-perl liblist-moreutils-perl libmath-bezier-perl libmath-round-perl libmath-vec-perl libmath-vecstat-perl libmodule-implementation-perl libmodule-runtime-perl libparams-classify-perl libparams-validate-perl libpng12-0 libreadonly-perl libregexp-common-perl libset-intspan-perl libspiffy-perl libswitch-perl libtext-format-perl libtry-tiny-perl libx11-6 libx11-data libxau6 libxcb1 libxdmcp6 libxpm4 perl perl-modules ttf-dejavu-core 0 upgraded, 0 newly installed, 51 to remove and 0 not upgraded. After this operation, 89.6 MB disk space will be freed. (Reading database ... 9686 files and directories currently installed.) Removing circos-tools ... Removing circos ... Removing libgd-gd2-perl ... Removing libgd2-xpm:amd64 ... Removing libfontconfig1:amd64 ... Removing fontconfig-config ... Removing fonts-circos-symbols ... Removing fonts-cmu ... Removing libcarp-always-perl ... Removing libparams-validate-perl ... Removing libmodule-implementation-perl ... Removing libtry-tiny-perl ... Removing libtext-format-perl ... Removing libio-all-perl ... Removing libspiffy-perl ... Removing libset-intspan-perl ... Removing libregexp-common-perl ... Removing libreadonly-perl ... Removing libmodule-runtime-perl ... Removing libparams-classify-perl ... Removing libmath-vecstat-perl ... Removing libmath-vec-perl ... Removing libmath-round-perl ... Removing libmath-bezier-perl ... Removing liblist-allutils-perl ... Removing liblist-moreutils-perl ... Removing libgraphics-colorobject-perl ... Removing libgraphics-colornames-perl ... Removing libgetopt-simple-perl ... Removing libfont-ttf-perl ... Removing libfilter-perl ... Removing libfile-basedir-perl ... Removing libdata-dumper-simple-perl ... Removing libconfig-general-perl ... Removing libclone-perl ... Removing libexpat1:amd64 ... Removing libfreetype6:amd64 ... Removing libjpeg8:amd64 ... Removing libpng12-0:amd64 ... Removing libxpm4:amd64 ... Removing libx11-6:amd64 ... Removing libx11-data ... Removing libxcb1:amd64 ... Removing libxau6:amd64 ... Removing libxdmcp6:amd64 ... Removing ttf-dejavu-core ... Removing perl ... Removing perl-modules ... Removing libswitch-perl ... Removing libclass-isa-perl ... Removing libgdbm3:amd64 ... 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', 'remove', 'libdata-dumper-simple-perl', 'libx11-data', 'libgd-gd2-perl', 'libfreetype6:amd64', 'libmath-round-perl', 'libx11-6:amd64', 'libmath-bezier-perl', 'libclone-perl', 'libjpeg8:amd64', 'libset-intspan-perl', 'liblist-allutils-perl', 'libclass-isa-perl', 'libtext-format-perl', 'libfont-ttf-perl', 'libswitch-perl', 'libgdbm3:amd64', 'perl', 'libgetopt-simple-perl', 'fonts-cmu', 'libregexp-common-perl', 'libparams-classify-perl', 'fonts-circos-symbols', 'libconfig-general-perl', 'libgd2-xpm:amd64', 'libparams-validate-perl', 'libfile-basedir-perl', 'libmath-vecstat-perl', 'libspiffy-perl', 'libgraphics-colornames-perl', 'libxdmcp6:amd64', 'libexpat1:amd64', 'libxau6:amd64', 'libtry-tiny-perl', 'libfilter-perl', 'perl-modules', 'libgraphics-colorobject-perl', 'libpng12-0:amd64', 'libxpm4:amd64', 'libxcb1:amd64', 'libmodule-implementation-perl', 'libcarp-always-perl', 'ttf-dejavu-core', 'libreadonly-perl', 'liblist-moreutils-perl', 'libio-all-perl', 'libfontconfig1:amd64', 'fontconfig-config', 'circos', 'libmath-vec-perl', 'libmodule-runtime-perl', 'circos-tools'] 0m25.6s INFO: Running scripts post_remove 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_remove_exceptions'] 0m25.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_remove_exceptions'] 0m25.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg', '--purge', 'libdata-dumper-simple-perl', 'libx11-data', 'libgd-gd2-perl', 'libfreetype6:amd64', 'libmath-round-perl', 'libx11-6:amd64', 'libmath-bezier-perl', 'libclone-perl', 'libjpeg8:amd64', 'libset-intspan-perl', 'liblist-allutils-perl', 'libclass-isa-perl', 'libtext-format-perl', 'libfont-ttf-perl', 'libswitch-perl', 'libgdbm3:amd64', 'perl', 'libgetopt-simple-perl', 'fonts-cmu', 'libregexp-common-perl', 'libparams-classify-perl', 'fonts-circos-symbols', 'libconfig-general-perl', 'libgd2-xpm:amd64', 'libparams-validate-perl', 'libfile-basedir-perl', 'libmath-vecstat-perl', 'libspiffy-perl', 'libgraphics-colornames-perl', 'libxdmcp6:amd64', 'libexpat1:amd64', 'libxau6:amd64', 'libtry-tiny-perl', 'libfilter-perl', 'perl-modules', 'libgraphics-colorobject-perl', 'libpng12-0:amd64', 'libxpm4:amd64', 'libxcb1:amd64', 'libmodule-implementation-perl', 'libcarp-always-perl', 'ttf-dejavu-core', 'libreadonly-perl', 'liblist-moreutils-perl', 'libio-all-perl', 'libfontconfig1:amd64', 'fontconfig-config', 'circos', 'libmath-vec-perl', 'libmodule-runtime-perl'] 0m25.8s DUMP: dpkg: warning: ignoring request to remove libdata-dumper-simple-perl which isn't installed dpkg: warning: ignoring request to remove libx11-data which isn't installed dpkg: warning: ignoring request to remove libgd-gd2-perl which isn't installed (Reading database ... 6854 files and directories currently installed.) Removing libfreetype6:amd64 ... Purging configuration files for libfreetype6:amd64 ... dpkg: warning: ignoring request to remove libmath-round-perl which isn't installed Removing libx11-6:amd64 ... Purging configuration files for libx11-6:amd64 ... dpkg: warning: ignoring request to remove libmath-bezier-perl which isn't installed dpkg: warning: ignoring request to remove libclone-perl which isn't installed dpkg: warning: ignoring request to remove libjpeg8 which isn't installed dpkg: warning: ignoring request to remove libset-intspan-perl which isn't installed dpkg: warning: ignoring request to remove liblist-allutils-perl which isn't installed dpkg: warning: ignoring request to remove libclass-isa-perl which isn't installed dpkg: warning: ignoring request to remove libtext-format-perl which isn't installed dpkg: warning: ignoring request to remove libfont-ttf-perl which isn't installed dpkg: warning: ignoring request to remove libswitch-perl which isn't installed Removing libgdbm3:amd64 ... Purging configuration files for libgdbm3:amd64 ... dpkg: warning: ignoring request to remove perl which isn't installed dpkg: warning: ignoring request to remove libgetopt-simple-perl which isn't installed dpkg: warning: ignoring request to remove fonts-cmu which isn't installed dpkg: warning: ignoring request to remove libregexp-common-perl which isn't installed dpkg: warning: ignoring request to remove libparams-classify-perl which isn't installed dpkg: warning: ignoring request to remove fonts-circos-symbols which isn't installed dpkg: warning: ignoring request to remove libconfig-general-perl which isn't installed Removing libgd2-xpm:amd64 ... Purging configuration files for libgd2-xpm:amd64 ... dpkg: warning: ignoring request to remove libparams-validate-perl which isn't installed dpkg: warning: ignoring request to remove libfile-basedir-perl which isn't installed dpkg: warning: ignoring request to remove libmath-vecstat-perl which isn't installed dpkg: warning: ignoring request to remove libspiffy-perl which isn't installed dpkg: warning: ignoring request to remove libgraphics-colornames-perl which isn't installed Removing libxdmcp6:amd64 ... Purging configuration files for libxdmcp6:amd64 ... Removing libexpat1:amd64 ... Purging configuration files for libexpat1:amd64 ... Removing libxau6:amd64 ... Purging configuration files for libxau6:amd64 ... dpkg: warning: ignoring request to remove libtry-tiny-perl which isn't installed dpkg: warning: ignoring request to remove libfilter-perl which isn't installed Removing perl-modules ... Purging configuration files for perl-modules ... dpkg: warning: ignoring request to remove libgraphics-colorobject-perl which isn't installed Removing libpng12-0:amd64 ... Purging configuration files for libpng12-0:amd64 ... Removing libxpm4:amd64 ... Purging configuration files for libxpm4:amd64 ... Removing libxcb1:amd64 ... Purging configuration files for libxcb1:amd64 ... dpkg: warning: ignoring request to remove libmodule-implementation-perl which isn't installed dpkg: warning: ignoring request to remove libcarp-always-perl which isn't installed dpkg: warning: ignoring request to remove ttf-dejavu-core which isn't installed dpkg: warning: ignoring request to remove libreadonly-perl which isn't installed dpkg: warning: ignoring request to remove liblist-moreutils-perl which isn't installed dpkg: warning: ignoring request to remove libio-all-perl which isn't installed Removing libfontconfig1:amd64 ... Purging configuration files for libfontconfig1:amd64 ... Removing fontconfig-config ... Purging configuration files for fontconfig-config ... Removing circos ... Purging configuration files for circos ... dpkg: warning: ignoring request to remove libmath-vec-perl which isn't installed dpkg: warning: ignoring request to remove libmodule-runtime-perl which isn't installed 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg', '--purge', 'libdata-dumper-simple-perl', 'libx11-data', 'libgd-gd2-perl', 'libfreetype6:amd64', 'libmath-round-perl', 'libx11-6:amd64', 'libmath-bezier-perl', 'libclone-perl', 'libjpeg8:amd64', 'libset-intspan-perl', 'liblist-allutils-perl', 'libclass-isa-perl', 'libtext-format-perl', 'libfont-ttf-perl', 'libswitch-perl', 'libgdbm3:amd64', 'perl', 'libgetopt-simple-perl', 'fonts-cmu', 'libregexp-common-perl', 'libparams-classify-perl', 'fonts-circos-symbols', 'libconfig-general-perl', 'libgd2-xpm:amd64', 'libparams-validate-perl', 'libfile-basedir-perl', 'libmath-vecstat-perl', 'libspiffy-perl', 'libgraphics-colornames-perl', 'libxdmcp6:amd64', 'libexpat1:amd64', 'libxau6:amd64', 'libtry-tiny-perl', 'libfilter-perl', 'perl-modules', 'libgraphics-colorobject-perl', 'libpng12-0:amd64', 'libxpm4:amd64', 'libxcb1:amd64', 'libmodule-implementation-perl', 'libcarp-always-perl', 'ttf-dejavu-core', 'libreadonly-perl', 'liblist-moreutils-perl', 'libio-all-perl', 'libfontconfig1:amd64', 'fontconfig-config', 'circos', 'libmath-vec-perl', 'libmodule-runtime-perl'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg', '--purge', 'circos-tools'] 0m25.8s DUMP: dpkg: warning: ignoring request to remove circos-tools which isn't installed 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg', '--purge', 'circos-tools'] 0m25.8s INFO: Running scripts post_purge 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_purge_exceptions'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_purge_exceptions'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg', '--purge', '--pending'] 0m25.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg', '--purge', '--pending'] 0m25.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg', '--remove', '--pending'] 0m25.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg', '--remove', '--pending'] 0m25.9s INFO: Running scripts post_test 0m25.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_test_exceptions'] 0m25.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'tmp/scripts/post_test_exceptions'] 0m25.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m26.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg-divert', '--list'] 0m26.3s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'dpkg-divert', '--list'] 0m26.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', 'clean'] 0m26.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpheBpWO', 'apt-get', 'clean'] 0m26.3s DEBUG: Recording chroot state 0m27.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/run/shm'] 0m27.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/run/shm'] 0m27.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/console'] 0m27.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/console'] 0m27.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/ptmx'] 0m27.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/ptmx'] 0m27.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/pts'] 0m27.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/dev/pts'] 0m27.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/proc'] 0m27.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpheBpWO/proc'] 0m27.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m27.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpheBpWO'] 0m27.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpheBpWO 0m27.9s INFO: PASS: Upgrading between Debian distributions. 0m27.9s INFO: PASS: All tests. 0m27.9s INFO: piuparts run ends. ret=0 End: 2018-02-28 13:02:26 UTC