Start: 2018-02-22 14:37:26 UTC [wheezy] Package: njplot Version: 2.4-1 Installed-Size: 302 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: lesstif2 (>= 1:0.94.4), libc6 (>= 2.7), libncbi6 (>= 6.1.20030421), libvibrant6a (>= 6.1.20060507), libxt6 Description: phylogenetic tree drawing program Homepage: http://pbil.univ-lyon1.fr/software/njplot Description-md5: 8475cd4a0146132aeafe2fa0b4f9a35b Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::x11, role::program, scope::utility, uitoolkit::motif, use::analysing, use::editing, use::organizing, use::printing, use::viewing, works-with-format::plaintext, works-with::biological-sequence, x11::application Section: science Priority: optional Filename: pool/main/n/njplot/njplot_2.4-1_amd64.deb Size: 124510 MD5sum: 5cc599a99e4485224db7e92d80069be9 SHA1: 47e4aafedd2ef725f6e4ff31d64193786b70eed4 SHA256: 6dfe2b0137d52ac5ed162ab4bd2b5780adc30fa0e77a337de1463c6d7e515fbf [wheezy-lts] Package: njplot Version: 2.4-1 Installed-Size: 302 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: lesstif2 (>= 1:0.94.4), libc6 (>= 2.7), libncbi6 (>= 6.1.20030421), libvibrant6a (>= 6.1.20060507), libxt6 Description: phylogenetic tree drawing program Homepage: http://pbil.univ-lyon1.fr/software/njplot Description-md5: 8475cd4a0146132aeafe2fa0b4f9a35b Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::x11, role::program, scope::utility, uitoolkit::motif, use::analysing, use::editing, use::organizing, use::printing, use::viewing, works-with-format::plaintext, works-with::biological-sequence, x11::application Section: science Priority: optional Filename: pool/main/n/njplot/njplot_2.4-1_amd64.deb Size: 124510 MD5sum: 5cc599a99e4485224db7e92d80069be9 SHA1: 47e4aafedd2ef725f6e4ff31d64193786b70eed4 SHA256: 6dfe2b0137d52ac5ed162ab4bd2b5780adc30fa0e77a337de1463c6d7e515fbf Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d wheezy-lts -B reference-chroot-metadata.dat --apt njplot=2.4-1 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.84~201801121524~0.83-4-g6e16ed9a starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --skip-logrotatefiles-test --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d wheezy-lts -B reference-chroot-metadata.dat --apt njplot=2.4-1 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.9.0-5-amd64 #1 SMP Debian 4.9.65-3+deb9u2 (2018-01-04) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpc0h7MQ 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpc0h7MQ 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.9s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/proc'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/proc'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/pts'] 0m1.9s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/pts'] 0m1.9s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/ptmx'] 0m1.9s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/ptmx'] 0m1.9s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/console'] 0m1.9s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/1', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/console'] 0m1.9s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/run/shm'] 0m2.0s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/run/shm'] 0m2.0s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ wheezy main 0m2.0s DEBUG: Created policy-rc.d and chmodded it. 0m2.0s DEBUG: Created resolv.conf. 0m2.0s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpc0h7MQ/tmp/scripts/ 0m2.0s DEBUG: Copying scriptsdir /etc/piuparts/scripts-wheezy to /srv/piuparts.debian.org/tmp/tmpc0h7MQ/tmp/scripts/ 0m2.0s INFO: Running scripts post_chroot_unpack 0m2.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', 'update'] 0m3.7s DUMP: Hit http://mirror-ubc.debian.org wheezy Release.gpg Hit http://mirror-ubc.debian.org wheezy Release Hit http://mirror-ubc.debian.org wheezy/main amd64 Packages Hit http://mirror-ubc.debian.org wheezy/main Translation-en Reading package lists... 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', 'update'] 0m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-yf', 'dist-upgrade'] 0m4.1s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m4.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-yf', 'dist-upgrade'] 0m4.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.5s DUMP: 0c96df6df725ee7ec7aebd2b6a77fb72 - 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m4.5s INFO: Running scripts post_setup 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_dummy_users'] 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_dummy_users'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_forbid_home'] 0m5.4s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_forbid_home'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.4s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' `/bin/sync' -> `true' 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_force-unsafe-io'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_minimize'] 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_minimize'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_squeeze-backports'] 0m5.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m6.2s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 335 kB of archives. After this operation, 1327 kB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main adduser all 3.113+nmu3 [264 kB] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main ucf all 3.0025+nmu3 [70.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 335 kB in 0s (16.0 MB/s) Selecting previously unselected package adduser. (Reading database ... 6639 files and directories currently installed.) Unpacking adduser (from .../adduser_3.113+nmu3_all.deb) ... Selecting previously unselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ... Moving old data out of the way Setting up adduser (3.113+nmu3) ... Setting up ucf (3.0025+nmu3) ... 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_zz_backports'] 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_setup_zz_backports'] 0m6.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.2s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u3 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u7 install ok installed gpgv gpgv 1.4.12-7+deb7u7 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u10 install ok installed libc6:amd64 libc6 2.13-38+deb7u10 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed login login 1:4.1.5.1-1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u10 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1 install ok installed perl-base perl-base 5.14.2-21+deb7u3 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1 install ok installed tzdata tzdata 2016d-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m6.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m6.2s DEBUG: Loading chroot meta data from reference-chroot-metadata.dat 0m6.8s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m7.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m7.2s INFO: Running scripts is_testable 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/is_testable_uninstallable'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/is_testable_uninstallable'] 0m7.2s INFO: Running scripts pre_test 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_test_exceptions'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_test_exceptions'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_test_root_password'] 0m7.2s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_test_root_password'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'show', 'njplot'] 0m7.2s DUMP: Package: njplot Version: 2.4-1 Installed-Size: 302 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: lesstif2 (>= 1:0.94.4), libc6 (>= 2.7), libncbi6 (>= 6.1.20030421), libvibrant6a (>= 6.1.20060507), libxt6 Description-en: phylogenetic tree drawing program NJplot is able to draw any dendrogram expressed in the Newick standard phylogenetic tree format (e.g., the format used by the Phylip package). NJplot is especially convenient for rooting the unrooted trees obtained from parsimony, distance or maximum likelihood tree-building methods. Homepage: http://pbil.univ-lyon1.fr/software/njplot Description-md5: 8475cd4a0146132aeafe2fa0b4f9a35b Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::x11, role::program, scope::utility, uitoolkit::motif, use::analysing, use::editing, use::organizing, use::printing, use::viewing, works-with-format::plaintext, works-with::biological-sequence, x11::application Section: science Priority: optional Filename: pool/main/n/njplot/njplot_2.4-1_amd64.deb Size: 124510 MD5sum: 5cc599a99e4485224db7e92d80069be9 SHA1: 47e4aafedd2ef725f6e4ff31d64193786b70eed4 SHA256: 6dfe2b0137d52ac5ed162ab4bd2b5780adc30fa0e77a337de1463c6d7e515fbf 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'show', 'njplot'] 0m7.2s INFO: apt-cache knows about the following packages: njplot 0m7.2s INFO: Running scripts pre_install 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_database-server'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_database-server'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_exceptions'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_exceptions'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_extras'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_extras'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture'] 0m7.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy'] 0m7.3s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy', 'njplot'] 0m7.3s DUMP: njplot: Installed: (none) Candidate: 2.4-1 Version table: 2.4-1 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 0m7.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy', 'njplot'] 0m7.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-y', 'install', 'njplot'] 0m10.1s DUMP: Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: lesstif2 libdrm2 libfreetype6 libgl1-mesa-glx libglapi-mesa libglu1-mesa libice6 libncbi6 libpng12-0 libsm6 libvibrant6a libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-glx0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxmu6 libxp6 libxt6 libxxf86vm1 ncbi-data x11-common Recommended packages: libgl1-mesa-dri The following NEW packages will be installed: lesstif2 libdrm2 libfreetype6 libgl1-mesa-glx libglapi-mesa libglu1-mesa libice6 libncbi6 libpng12-0 libsm6 libvibrant6a libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-glx0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxmu6 libxp6 libxt6 libxxf86vm1 ncbi-data njplot x11-common 0 upgraded, 28 newly installed, 0 to remove and 0 not upgraded. Need to get 16.8 MB of archives. After this operation, 50.7 MB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main libfreetype6 amd64 2.4.9-1.1+deb7u3 [452 kB] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main x11-common all 1:7.7+3~deb7u1 [284 kB] Get:3 http://mirror-ubc.debian.org/debian/ wheezy/main libice6 amd64 2:1.0.8-2 [63.1 kB] Get:4 http://mirror-ubc.debian.org/debian/ wheezy/main libsm6 amd64 2:1.2.1-2 [34.2 kB] Get:5 http://mirror-ubc.debian.org/debian/ wheezy/main libxau6 amd64 1:1.0.7-1 [18.8 kB] Get:6 http://mirror-ubc.debian.org/debian/ wheezy/main libxdmcp6 amd64 1:1.1.1-1 [26.3 kB] Get:7 http://mirror-ubc.debian.org/debian/ wheezy/main libxcb1 amd64 1.8.1-2+deb7u1 [50.2 kB] Get:8 http://mirror-ubc.debian.org/debian/ wheezy/main libx11-data all 2:1.5.0-1+deb7u2 [194 kB] Get:9 http://mirror-ubc.debian.org/debian/ wheezy/main libx11-6 amd64 2:1.5.0-1+deb7u2 [901 kB] Get:10 http://mirror-ubc.debian.org/debian/ wheezy/main libxext6 amd64 2:1.3.1-2+deb7u1 [54.8 kB] Get:11 http://mirror-ubc.debian.org/debian/ wheezy/main libxp6 amd64 1:1.0.1-2+deb7u1 [24.1 kB] Get:12 http://mirror-ubc.debian.org/debian/ wheezy/main libxt6 amd64 1:1.1.3-1+deb7u1 [212 kB] Get:13 http://mirror-ubc.debian.org/debian/ wheezy/main lesstif2 amd64 1:0.95.2-1.1 [710 kB] Get:14 http://mirror-ubc.debian.org/debian/ wheezy/main libdrm2 amd64 2.4.40-1~deb7u2 [459 kB] Get:15 http://mirror-ubc.debian.org/debian/ wheezy/main libglapi-mesa amd64 8.0.5-4+deb7u2 [46.8 kB] Get:16 http://mirror-ubc.debian.org/debian/ wheezy/main libx11-xcb1 amd64 2:1.5.0-1+deb7u2 [139 kB] Get:17 http://mirror-ubc.debian.org/debian/ wheezy/main libxcb-glx0 amd64 1.8.1-2+deb7u1 [32.2 kB] Get:18 http://mirror-ubc.debian.org/debian/ wheezy/main libxfixes3 amd64 1:5.0-4+deb7u1 [21.3 kB] Get:19 http://mirror-ubc.debian.org/debian/ wheezy/main libxdamage1 amd64 1:1.1.3-2 [14.3 kB] Get:20 http://mirror-ubc.debian.org/debian/ wheezy/main libxxf86vm1 amd64 1:1.1.2-1+deb7u1 [19.5 kB] Get:21 http://mirror-ubc.debian.org/debian/ wheezy/main libgl1-mesa-glx amd64 8.0.5-4+deb7u2 [134 kB] Get:22 http://mirror-ubc.debian.org/debian/ wheezy/main libglu1-mesa amd64 8.0.5-4+deb7u2 [191 kB] Get:23 http://mirror-ubc.debian.org/debian/ wheezy/main ncbi-data all 6.1.20120620-2 [5893 kB] Get:24 http://mirror-ubc.debian.org/debian/ wheezy/main libncbi6 amd64 6.1.20120620-2 [4887 kB] Get:25 http://mirror-ubc.debian.org/debian/ wheezy/main libpng12-0 amd64 1.2.49-1+deb7u2 [191 kB] Get:26 http://mirror-ubc.debian.org/debian/ wheezy/main libxmu6 amd64 2:1.1.1-1 [66.6 kB] Get:27 http://mirror-ubc.debian.org/debian/ wheezy/main libvibrant6a amd64 6.1.20120620-2 [1548 kB] Get:28 http://mirror-ubc.debian.org/debian/ wheezy/main njplot amd64 2.4-1 [125 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 16.8 MB in 0s (20.9 MB/s) Selecting previously unselected package libfreetype6:amd64. (Reading database ... 6768 files and directories currently installed.) Unpacking libfreetype6:amd64 (from .../libfreetype6_2.4.9-1.1+deb7u3_amd64.deb) ... Selecting previously unselected package x11-common. Unpacking x11-common (from .../x11-common_1%3a7.7+3~deb7u1_all.deb) ... Selecting previously unselected package libice6:amd64. Unpacking libice6:amd64 (from .../libice6_2%3a1.0.8-2_amd64.deb) ... Selecting previously unselected package libsm6:amd64. Unpacking libsm6:amd64 (from .../libsm6_2%3a1.2.1-2_amd64.deb) ... Selecting previously unselected package libxau6:amd64. Unpacking libxau6:amd64 (from .../libxau6_1%3a1.0.7-1_amd64.deb) ... Selecting previously unselected package libxdmcp6:amd64. Unpacking libxdmcp6:amd64 (from .../libxdmcp6_1%3a1.1.1-1_amd64.deb) ... Selecting previously unselected package libxcb1:amd64. Unpacking libxcb1:amd64 (from .../libxcb1_1.8.1-2+deb7u1_amd64.deb) ... Selecting previously unselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1+deb7u2_all.deb) ... Selecting previously unselected package libx11-6:amd64. Unpacking libx11-6:amd64 (from .../libx11-6_2%3a1.5.0-1+deb7u2_amd64.deb) ... Selecting previously unselected package libxext6:amd64. Unpacking libxext6:amd64 (from .../libxext6_2%3a1.3.1-2+deb7u1_amd64.deb) ... Selecting previously unselected package libxp6:amd64. Unpacking libxp6:amd64 (from .../libxp6_1%3a1.0.1-2+deb7u1_amd64.deb) ... Selecting previously unselected package libxt6:amd64. Unpacking libxt6:amd64 (from .../libxt6_1%3a1.1.3-1+deb7u1_amd64.deb) ... Selecting previously unselected package lesstif2:amd64. Unpacking lesstif2:amd64 (from .../lesstif2_1%3a0.95.2-1.1_amd64.deb) ... Selecting previously unselected package libdrm2:amd64. Unpacking libdrm2:amd64 (from .../libdrm2_2.4.40-1~deb7u2_amd64.deb) ... Selecting previously unselected package libglapi-mesa:amd64. Unpacking libglapi-mesa:amd64 (from .../libglapi-mesa_8.0.5-4+deb7u2_amd64.deb) ... Selecting previously unselected package libx11-xcb1:amd64. Unpacking libx11-xcb1:amd64 (from .../libx11-xcb1_2%3a1.5.0-1+deb7u2_amd64.deb) ... Selecting previously unselected package libxcb-glx0:amd64. Unpacking libxcb-glx0:amd64 (from .../libxcb-glx0_1.8.1-2+deb7u1_amd64.deb) ... Selecting previously unselected package libxfixes3:amd64. Unpacking libxfixes3:amd64 (from .../libxfixes3_1%3a5.0-4+deb7u1_amd64.deb) ... Selecting previously unselected package libxdamage1:amd64. Unpacking libxdamage1:amd64 (from .../libxdamage1_1%3a1.1.3-2_amd64.deb) ... Selecting previously unselected package libxxf86vm1:amd64. Unpacking libxxf86vm1:amd64 (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_amd64.deb) ... Selecting previously unselected package libgl1-mesa-glx:amd64. Unpacking libgl1-mesa-glx:amd64 (from .../libgl1-mesa-glx_8.0.5-4+deb7u2_amd64.deb) ... Selecting previously unselected package libglu1-mesa:amd64. Unpacking libglu1-mesa:amd64 (from .../libglu1-mesa_8.0.5-4+deb7u2_amd64.deb) ... Selecting previously unselected package ncbi-data. Unpacking ncbi-data (from .../ncbi-data_6.1.20120620-2_all.deb) ... Selecting previously unselected package libncbi6:amd64. Unpacking libncbi6:amd64 (from .../libncbi6_6.1.20120620-2_amd64.deb) ... Selecting previously unselected package libpng12-0:amd64. Unpacking libpng12-0:amd64 (from .../libpng12-0_1.2.49-1+deb7u2_amd64.deb) ... Selecting previously unselected package libxmu6:amd64. Unpacking libxmu6:amd64 (from .../libxmu6_2%3a1.1.1-1_amd64.deb) ... Selecting previously unselected package libvibrant6a:amd64. Unpacking libvibrant6a:amd64 (from .../libvibrant6a_6.1.20120620-2_amd64.deb) ... Selecting previously unselected package njplot. Unpacking njplot (from .../njplot_2.4-1_amd64.deb) ... Setting up libfreetype6:amd64 (2.4.9-1.1+deb7u3) ... Setting up x11-common (1:7.7+3~deb7u1) ... invoke-rc.d: policy-rc.d denied execution of start. Setting up libice6:amd64 (2:1.0.8-2) ... Setting up libsm6:amd64 (2:1.2.1-2) ... Setting up libxau6:amd64 (1:1.0.7-1) ... Setting up libxdmcp6:amd64 (1:1.1.1-1) ... Setting up libxcb1:amd64 (1.8.1-2+deb7u1) ... Setting up libx11-data (2:1.5.0-1+deb7u2) ... Setting up libx11-6:amd64 (2:1.5.0-1+deb7u2) ... Setting up libxext6:amd64 (2:1.3.1-2+deb7u1) ... Setting up libxp6:amd64 (1:1.0.1-2+deb7u1) ... Setting up libxt6:amd64 (1:1.1.3-1+deb7u1) ... Setting up lesstif2:amd64 (1:0.95.2-1.1) ... Setting up libdrm2:amd64 (2.4.40-1~deb7u2) ... Setting up libglapi-mesa:amd64 (8.0.5-4+deb7u2) ... Setting up libx11-xcb1:amd64 (2:1.5.0-1+deb7u2) ... Setting up libxcb-glx0:amd64 (1.8.1-2+deb7u1) ... Setting up libxfixes3:amd64 (1:5.0-4+deb7u1) ... Setting up libxdamage1:amd64 (1:1.1.3-2) ... Setting up libxxf86vm1:amd64 (1:1.1.2-1+deb7u1) ... Setting up libgl1-mesa-glx:amd64 (8.0.5-4+deb7u2) ... Setting up libglu1-mesa:amd64 (8.0.5-4+deb7u2) ... Setting up ncbi-data (6.1.20120620-2) ... Setting up libncbi6:amd64 (6.1.20120620-2) ... Setting up libpng12-0:amd64 (1.2.49-1+deb7u2) ... Setting up libxmu6:amd64 (2:1.1.1-1) ... Setting up libvibrant6a:amd64 (6.1.20120620-2) ... Setting up njplot (2.4-1) ... 0m10.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-y', 'install', 'njplot'] 0m10.1s INFO: Running scripts post_install 0m10.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_install_exceptions'] 0m10.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_install_exceptions'] 0m10.2s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m10.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m10.6s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpc0h7MQ to wheezy-lts 0m10.6s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ wheezy main deb http://security.debian.org wheezy/updates main 0m10.6s INFO: Running scripts pre_distupgrade 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_exceptions'] 0m10.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_exceptions'] 0m10.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_wheezy'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_wheezy'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m10.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', 'update'] 0m12.7s DUMP: Hit http://mirror-ubc.debian.org wheezy Release.gpg Hit http://mirror-ubc.debian.org wheezy Release Hit http://mirror-ubc.debian.org wheezy/main amd64 Packages Hit http://mirror-ubc.debian.org wheezy/main Translation-en Get:1 http://security.debian.org wheezy/updates Release.gpg [1601 B] Get:2 http://security.debian.org wheezy/updates Release [39.0 kB] Get:3 http://security.debian.org wheezy/updates/main amd64 Packages [612 kB] Get:4 http://security.debian.org wheezy/updates/main Translation-en [334 kB] Fetched 987 kB in 0s (1107 kB/s) Reading package lists... 0m12.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', 'update'] 0m12.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-yf', 'dist-upgrade'] 0m17.7s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: bash gnupg gpgv libc-bin libc6 libdb5.1 libfreetype6 libx11-6 libx11-data libx11-xcb1 libxfixes3 login multiarch-support passwd perl-base sensible-utils tar tzdata 18 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 17.0 MB of archives. After this operation, 699 kB of additional disk space will be used. Get:1 http://security.debian.org/ wheezy/updates/main bash amd64 4.2+dfsg-0.1+deb7u4 [1499 kB] Get:2 http://security.debian.org/ wheezy/updates/main login amd64 1:4.1.5.1-1+deb7u1 [984 kB] Get:3 http://security.debian.org/ wheezy/updates/main perl-base amd64 5.14.2-21+deb7u5 [1534 kB] Get:4 http://security.debian.org/ wheezy/updates/main tar amd64 1.26+dfsg-0.1+deb7u1 [984 kB] Get:5 http://security.debian.org/ wheezy/updates/main libc-bin amd64 2.13-38+deb7u12 [1275 kB] Get:6 http://security.debian.org/ wheezy/updates/main libc6 amd64 2.13-38+deb7u12 [4226 kB] Get:7 http://security.debian.org/ wheezy/updates/main libdb5.1 amd64 5.1.29-5+deb7u1 [723 kB] Get:8 http://security.debian.org/ wheezy/updates/main libfreetype6 amd64 2.4.9-1.1+deb7u7 [454 kB] Get:9 http://security.debian.org/ wheezy/updates/main libx11-data all 2:1.5.0-1+deb7u4 [189 kB] Get:10 http://security.debian.org/ wheezy/updates/main libx11-6 amd64 2:1.5.0-1+deb7u4 [902 kB] Get:11 http://security.debian.org/ wheezy/updates/main libx11-xcb1 amd64 2:1.5.0-1+deb7u4 [139 kB] Get:12 http://security.debian.org/ wheezy/updates/main libxfixes3 amd64 1:5.0-4+deb7u2 [21.6 kB] Get:13 http://security.debian.org/ wheezy/updates/main gpgv amd64 1.4.12-7+deb7u9 [229 kB] Get:14 http://security.debian.org/ wheezy/updates/main gnupg amd64 1.4.12-7+deb7u9 [1954 kB] Get:15 http://security.debian.org/ wheezy/updates/main passwd amd64 1:4.1.5.1-1+deb7u1 [1262 kB] Get:16 http://security.debian.org/ wheezy/updates/main sensible-utils all 0.0.7+deb7u1 [9000 B] Get:17 http://security.debian.org/ wheezy/updates/main tzdata all 2017c-0+deb7u1 [493 kB] Get:18 http://security.debian.org/ wheezy/updates/main multiarch-support amd64 2.13-38+deb7u12 [152 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 17.0 MB in 1s (12.4 MB/s) (Reading database ... 7411 files and directories currently installed.) Preparing to replace bash 4.2+dfsg-0.1+deb7u3 (using .../bash_4.2+dfsg-0.1+deb7u4_amd64.deb) ... Unpacking replacement bash ... Setting up bash (4.2+dfsg-0.1+deb7u4) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 7411 files and directories currently installed.) Preparing to replace login 1:4.1.5.1-1 (using .../login_1%3a4.1.5.1-1+deb7u1_amd64.deb) ... Unpacking replacement login ... Setting up login (1:4.1.5.1-1+deb7u1) ... (Reading database ... 7411 files and directories currently installed.) Preparing to replace perl-base 5.14.2-21+deb7u3 (using .../perl-base_5.14.2-21+deb7u5_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.14.2-21+deb7u5) ... (Reading database ... 7411 files and directories currently installed.) Preparing to replace tar 1.26+dfsg-0.1 (using .../tar_1.26+dfsg-0.1+deb7u1_amd64.deb) ... Unpacking replacement tar ... Setting up tar (1.26+dfsg-0.1+deb7u1) ... (Reading database ... 7411 files and directories currently installed.) Preparing to replace libc-bin 2.13-38+deb7u10 (using .../libc-bin_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-38+deb7u12) ... (Reading database ... 7411 files and directories currently installed.) Preparing to replace libc6:amd64 2.13-38+deb7u10 (using .../libc6_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc6:amd64 ... Setting up libc6:amd64 (2.13-38+deb7u12) ... (Reading database ... 7411 files and directories currently installed.) Preparing to replace libdb5.1:amd64 5.1.29-5 (using .../libdb5.1_5.1.29-5+deb7u1_amd64.deb) ... Unpacking replacement libdb5.1:amd64 ... Setting up libdb5.1:amd64 (5.1.29-5+deb7u1) ... (Reading database ... 7411 files and directories currently installed.) Preparing to replace libfreetype6:amd64 2.4.9-1.1+deb7u3 (using .../libfreetype6_2.4.9-1.1+deb7u7_amd64.deb) ... Unpacking replacement libfreetype6:amd64 ... Preparing to replace libx11-data 2:1.5.0-1+deb7u2 (using .../libx11-data_2%3a1.5.0-1+deb7u4_all.deb) ... Unpacking replacement libx11-data ... Preparing to replace libx11-6:amd64 2:1.5.0-1+deb7u2 (using .../libx11-6_2%3a1.5.0-1+deb7u4_amd64.deb) ... Unpacking replacement libx11-6:amd64 ... Preparing to replace libx11-xcb1:amd64 2:1.5.0-1+deb7u2 (using .../libx11-xcb1_2%3a1.5.0-1+deb7u4_amd64.deb) ... Unpacking replacement libx11-xcb1:amd64 ... Preparing to replace libxfixes3:amd64 1:5.0-4+deb7u1 (using .../libxfixes3_1%3a5.0-4+deb7u2_amd64.deb) ... Unpacking replacement libxfixes3:amd64 ... Preparing to replace gpgv 1.4.12-7+deb7u7 (using .../gpgv_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.12-7+deb7u9) ... (Reading database ... 7411 files and directories currently installed.) Preparing to replace gnupg 1.4.12-7+deb7u7 (using .../gnupg_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gnupg ... 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(Reading database ... 7423 files and directories currently installed.) Preparing to replace multiarch-support 2.13-38+deb7u10 (using .../multiarch-support_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.13-38+deb7u12) ... Setting up libfreetype6:amd64 (2.4.9-1.1+deb7u7) ... Setting up libx11-data (2:1.5.0-1+deb7u4) ... Setting up libx11-6:amd64 (2:1.5.0-1+deb7u4) ... Setting up libx11-xcb1:amd64 (2:1.5.0-1+deb7u4) ... Setting up libxfixes3:amd64 (1:5.0-4+deb7u2) ... 0m17.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-yf', 'dist-upgrade'] 0m17.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m18.0s DUMP: 1840df5bce4d504c83e652136bafb18c - 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'show', 'njplot'] 0m18.0s DUMP: Package: njplot Version: 2.4-1 Installed-Size: 302 Maintainer: Debian Med Packaging Team Architecture: amd64 Depends: lesstif2 (>= 1:0.94.4), libc6 (>= 2.7), libncbi6 (>= 6.1.20030421), libvibrant6a (>= 6.1.20060507), libxt6 Description-en: phylogenetic tree drawing program NJplot is able to draw any dendrogram expressed in the Newick standard phylogenetic tree format (e.g., the format used by the Phylip package). NJplot is especially convenient for rooting the unrooted trees obtained from parsimony, distance or maximum likelihood tree-building methods. Homepage: http://pbil.univ-lyon1.fr/software/njplot Description-md5: 8475cd4a0146132aeafe2fa0b4f9a35b Tag: field::biology, field::biology:bioinformatics, implemented-in::c, interface::x11, role::program, scope::utility, uitoolkit::motif, use::analysing, use::editing, use::organizing, use::printing, use::viewing, works-with-format::plaintext, works-with::biological-sequence, x11::application Section: science Priority: optional Filename: pool/main/n/njplot/njplot_2.4-1_amd64.deb Size: 124510 MD5sum: 5cc599a99e4485224db7e92d80069be9 SHA1: 47e4aafedd2ef725f6e4ff31d64193786b70eed4 SHA256: 6dfe2b0137d52ac5ed162ab4bd2b5780adc30fa0e77a337de1463c6d7e515fbf 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'show', 'njplot'] 0m18.0s INFO: apt-cache knows about the following packages: njplot 0m18.0s INFO: Running scripts pre_install 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_database-server'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_database-server'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_exceptions'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_exceptions'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_extras'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_extras'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m18.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m18.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy'] 0m18.1s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main Translation-en 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy'] 0m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy', 'njplot'] 0m18.1s DUMP: njplot: Installed: 2.4-1 Candidate: 2.4-1 Version table: *** 2.4-1 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 100 /var/lib/dpkg/status 0m18.1s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy', 'njplot'] 0m18.1s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-y', 'install', 'njplot'] 0m18.4s DUMP: Reading package lists... Building dependency tree... Reading state information... njplot is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-y', 'install', 'njplot'] 0m18.4s INFO: Running scripts post_install 0m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_install_exceptions'] 0m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_install_exceptions'] 0m18.4s INFO: Running scripts post_distupgrade 0m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m18.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m18.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_exceptions'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_exceptions'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m18.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_zz_backports'] 0m18.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_distupgrade_zz_backports'] 0m18.5s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m19.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m19.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m19.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m19.8s INFO: Running scripts pre_install 0m19.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_database-server'] 0m19.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_database-server'] 0m19.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_exceptions'] 0m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_exceptions'] 0m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_extras'] 0m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_extras'] 0m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture'] 0m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture'] 0m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy'] 0m19.9s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main Translation-en 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy'] 0m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy', 'njplot'] 0m19.9s DUMP: njplot: Installed: 2.4-1 Candidate: 2.4-1 Version table: *** 2.4-1 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 100 /var/lib/dpkg/status 0m19.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-cache', 'policy', 'njplot'] 0m19.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-y', 'install', 'njplot=2.4-1'] 0m20.3s DUMP: Reading package lists... Building dependency tree... Reading state information... njplot is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', '-y', 'install', 'njplot=2.4-1'] 0m20.3s INFO: Running scripts post_install 0m20.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_install_exceptions'] 0m20.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_install_exceptions'] 0m20.3s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m20.8s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m20.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m20.8s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u4 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u9 install ok installed gpgv gpgv 1.4.12-7+deb7u9 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed lesstif2:amd64 lesstif2 1:0.95.2-1.1 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u12 install ok installed libc6:amd64 libc6 2.13-38+deb7u12 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5+deb7u1 install ok installed libdrm2:amd64 libdrm2 2.4.40-1~deb7u2 install ok installed libfreetype6:amd64 libfreetype6 2.4.9-1.1+deb7u7 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed libgl1-mesa-glx:amd64 libgl1-mesa-glx 8.0.5-4+deb7u2 install ok installed libglapi-mesa:amd64 libglapi-mesa 8.0.5-4+deb7u2 install ok installed libglu1-mesa:amd64 libglu1-mesa 8.0.5-4+deb7u2 install ok installed libice6:amd64 libice6 2:1.0.8-2 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncbi6:amd64 libncbi6 6.1.20120620-2 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libpng12-0:amd64 libpng12-0 1.2.49-1+deb7u2 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libsm6:amd64 libsm6 2:1.2.1-2 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed libvibrant6a:amd64 libvibrant6a 6.1.20120620-2 install ok installed libx11-6:amd64 libx11-6 2:1.5.0-1+deb7u4 install ok installed libx11-data libx11-data 2:1.5.0-1+deb7u4 install ok installed libx11-xcb1:amd64 libx11-xcb1 2:1.5.0-1+deb7u4 install ok installed libxau6:amd64 libxau6 1:1.0.7-1 install ok installed libxcb-glx0:amd64 libxcb-glx0 1.8.1-2+deb7u1 install ok installed libxcb1:amd64 libxcb1 1.8.1-2+deb7u1 install ok installed libxdamage1:amd64 libxdamage1 1:1.1.3-2 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.1-1 install ok installed libxext6:amd64 libxext6 2:1.3.1-2+deb7u1 install ok installed libxfixes3:amd64 libxfixes3 1:5.0-4+deb7u2 install ok installed libxmu6:amd64 libxmu6 2:1.1.1-1 install ok installed libxp6:amd64 libxp6 1:1.0.1-2+deb7u1 install ok installed libxt6:amd64 libxt6 1:1.1.3-1+deb7u1 install ok installed libxxf86vm1:amd64 libxxf86vm1 1:1.1.2-1+deb7u1 install ok installed login login 1:4.1.5.1-1+deb7u1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u12 install ok installed ncbi-data ncbi-data 6.1.20120620-2 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed njplot njplot 2.4-1 install ok installed passwd passwd 1:4.1.5.1-1+deb7u1 install ok installed perl-base perl-base 5.14.2-21+deb7u5 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7+deb7u1 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1+deb7u1 install ok installed tzdata tzdata 2017c-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed x11-common x11-common 1:7.7+3~deb7u1 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m20.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m21.4s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', '-ac', '--ignore-obsolete'] 0m22.3s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', '-ac', '--ignore-obsolete'] 0m22.3s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m22.3s DUMP: 0.15.1 0m22.3s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m22.3s INFO: Running adequate version 0.15.1 now. 0m22.3s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'njplot'] 0m22.4s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'njplot'] 0m22.4s INFO: Running scripts pre_remove 0m22.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m22.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m22.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m22.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m22.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m23.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m23.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m23.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m23.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m23.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m23.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_exceptions'] 0m23.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/pre_remove_exceptions'] 0m23.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', 'remove', 'libx11-data', 'libglapi-mesa:amd64', 'libfreetype6:amd64', 'libx11-6:amd64', 'libglu1-mesa:amd64', 'libdrm2:amd64', 'lesstif2:amd64', 'libxfixes3:amd64', 'libsm6:amd64', 'x11-common', 'libxcb-glx0:amd64', 'libxxf86vm1:amd64', 'libx11-xcb1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxau6:amd64', 'ncbi-data', 'libxp6:amd64', 'libpng12-0:amd64', 'libgl1-mesa-glx:amd64', 'libvibrant6a:amd64', 'libxext6:amd64', 'libice6:amd64', 'libncbi6:amd64', 'libxcb1:amd64', 'libxmu6:amd64', 'libxt6:amd64', 'njplot'] 0m24.5s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: lesstif2 libdrm2 libfreetype6 libgl1-mesa-glx libglapi-mesa libglu1-mesa libice6 libncbi6 libpng12-0 libsm6 libvibrant6a libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-glx0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxmu6 libxp6 libxt6 libxxf86vm1 ncbi-data njplot x11-common 0 upgraded, 0 newly installed, 28 to remove and 0 not upgraded. After this operation, 50.8 MB disk space will be freed. (Reading database ... 7423 files and directories currently installed.) Removing njplot ... Removing libvibrant6a:amd64 ... Removing lesstif2:amd64 ... Removing libglu1-mesa:amd64 ... Removing libgl1-mesa-glx:amd64 ... Removing libdrm2:amd64 ... Removing libfreetype6:amd64 ... Removing libglapi-mesa:amd64 ... Removing libxmu6:amd64 ... Removing libxt6:amd64 ... Removing libsm6:amd64 ... Removing libice6:amd64 ... Removing libncbi6:amd64 ... Removing libpng12-0:amd64 ... Removing libxdamage1:amd64 ... Removing libxfixes3:amd64 ... Removing libx11-xcb1:amd64 ... Removing libxxf86vm1:amd64 ... Removing libxp6:amd64 ... Removing libxext6:amd64 ... Removing libx11-6:amd64 ... Removing libx11-data ... Removing libxcb-glx0:amd64 ... Removing libxcb1:amd64 ... Removing libxau6:amd64 ... Removing libxdmcp6:amd64 ... Removing ncbi-data ... Removing x11-common ... invoke-rc.d: policy-rc.d denied execution of stop. 0m24.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', 'remove', 'libx11-data', 'libglapi-mesa:amd64', 'libfreetype6:amd64', 'libx11-6:amd64', 'libglu1-mesa:amd64', 'libdrm2:amd64', 'lesstif2:amd64', 'libxfixes3:amd64', 'libsm6:amd64', 'x11-common', 'libxcb-glx0:amd64', 'libxxf86vm1:amd64', 'libx11-xcb1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxau6:amd64', 'ncbi-data', 'libxp6:amd64', 'libpng12-0:amd64', 'libgl1-mesa-glx:amd64', 'libvibrant6a:amd64', 'libxext6:amd64', 'libice6:amd64', 'libncbi6:amd64', 'libxcb1:amd64', 'libxmu6:amd64', 'libxt6:amd64', 'njplot'] 0m24.5s INFO: Running scripts post_remove 0m24.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_remove_exceptions'] 0m24.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_remove_exceptions'] 0m24.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg', '--purge', 'libx11-data', 'libglapi-mesa:amd64', 'libfreetype6:amd64', 'libx11-6:amd64', 'libglu1-mesa:amd64', 'libdrm2:amd64', 'lesstif2:amd64', 'libxfixes3:amd64', 'libsm6:amd64', 'x11-common', 'libxcb-glx0:amd64', 'libxxf86vm1:amd64', 'libx11-xcb1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxau6:amd64', 'ncbi-data', 'libxp6:amd64', 'libpng12-0:amd64', 'libgl1-mesa-glx:amd64', 'libvibrant6a:amd64', 'libxext6:amd64', 'libice6:amd64', 'libncbi6:amd64', 'libxcb1:amd64', 'libxmu6:amd64', 'libxt6:amd64'] 0m24.9s DUMP: dpkg: warning: ignoring request to remove libx11-data which isn't installed (Reading database ... 6801 files and directories currently installed.) Removing libglapi-mesa:amd64 ... Purging configuration files for libglapi-mesa:amd64 ... Removing libfreetype6:amd64 ... Purging configuration files for libfreetype6:amd64 ... Removing libx11-6:amd64 ... Purging configuration files for libx11-6:amd64 ... Removing libglu1-mesa:amd64 ... Purging configuration files for libglu1-mesa:amd64 ... Removing libdrm2:amd64 ... Purging configuration files for libdrm2:amd64 ... Removing lesstif2:amd64 ... Purging configuration files for lesstif2:amd64 ... Removing libxfixes3:amd64 ... Purging configuration files for libxfixes3:amd64 ... Removing libsm6:amd64 ... Purging configuration files for libsm6:amd64 ... Removing x11-common ... Purging configuration files for x11-common ... Removing libxcb-glx0:amd64 ... Purging configuration files for libxcb-glx0:amd64 ... Removing libxxf86vm1:amd64 ... Purging configuration files for libxxf86vm1:amd64 ... Removing libx11-xcb1:amd64 ... Purging configuration files for libx11-xcb1:amd64 ... Removing libxdamage1:amd64 ... Purging configuration files for libxdamage1:amd64 ... Removing libxdmcp6:amd64 ... Purging configuration files for libxdmcp6:amd64 ... Removing libxau6:amd64 ... Purging configuration files for libxau6:amd64 ... Removing ncbi-data ... Purging configuration files for ncbi-data ... Removing libxp6:amd64 ... Purging configuration files for libxp6:amd64 ... Removing libpng12-0:amd64 ... Purging configuration files for libpng12-0:amd64 ... Removing libgl1-mesa-glx:amd64 ... Purging configuration files for libgl1-mesa-glx:amd64 ... Removing libvibrant6a:amd64 ... Purging configuration files for libvibrant6a:amd64 ... Removing libxext6:amd64 ... Purging configuration files for libxext6:amd64 ... Removing libice6:amd64 ... Purging configuration files for libice6:amd64 ... Removing libncbi6:amd64 ... Purging configuration files for libncbi6:amd64 ... Removing libxcb1:amd64 ... Purging configuration files for libxcb1:amd64 ... Removing libxmu6:amd64 ... Purging configuration files for libxmu6:amd64 ... Removing libxt6:amd64 ... Purging configuration files for libxt6:amd64 ... 0m24.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg', '--purge', 'libx11-data', 'libglapi-mesa:amd64', 'libfreetype6:amd64', 'libx11-6:amd64', 'libglu1-mesa:amd64', 'libdrm2:amd64', 'lesstif2:amd64', 'libxfixes3:amd64', 'libsm6:amd64', 'x11-common', 'libxcb-glx0:amd64', 'libxxf86vm1:amd64', 'libx11-xcb1:amd64', 'libxdamage1:amd64', 'libxdmcp6:amd64', 'libxau6:amd64', 'ncbi-data', 'libxp6:amd64', 'libpng12-0:amd64', 'libgl1-mesa-glx:amd64', 'libvibrant6a:amd64', 'libxext6:amd64', 'libice6:amd64', 'libncbi6:amd64', 'libxcb1:amd64', 'libxmu6:amd64', 'libxt6:amd64'] 0m24.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg', '--purge', 'njplot'] 0m24.9s DUMP: (Reading database ... 6780 files and directories currently installed.) Removing njplot ... Purging configuration files for njplot ... 0m24.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg', '--purge', 'njplot'] 0m24.9s INFO: Running scripts post_purge 0m24.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_purge_exceptions'] 0m24.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_purge_exceptions'] 0m24.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg', '--purge', '--pending'] 0m24.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg', '--purge', '--pending'] 0m24.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg', '--remove', '--pending'] 0m24.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg', '--remove', '--pending'] 0m24.9s INFO: Running scripts post_test 0m24.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_test_exceptions'] 0m24.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'tmp/scripts/post_test_exceptions'] 0m24.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m25.3s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m25.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg-divert', '--list'] 0m25.3s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m25.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'dpkg-divert', '--list'] 0m25.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', 'clean'] 0m25.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ', 'apt-get', 'clean'] 0m25.3s DEBUG: Recording chroot state 0m26.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/run/shm'] 0m26.6s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/run/shm'] 0m26.6s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/console'] 0m26.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/console'] 0m26.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/ptmx'] 0m26.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/ptmx'] 0m26.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/pts'] 0m26.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/dev/pts'] 0m26.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/proc'] 0m26.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ/proc'] 0m26.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m26.8s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpc0h7MQ'] 0m26.8s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpc0h7MQ 0m26.8s INFO: PASS: Upgrading between Debian distributions. 0m26.8s INFO: PASS: All tests. 0m26.8s INFO: piuparts run ends. ret=0 End: 2018-02-22 14:37:53 UTC