Start: 2018-10-03 14:03:20 UTC [wheezy] Package: python-openbabel Source: openbabel Version: 2.3.1+dfsg-4 Installed-Size: 6946 Maintainer: Debichem Team Architecture: amd64 Provides: python2.6-openbabel, python2.7-openbabel Depends: python2.7 | python2.6, python (>= 2.6.6-7~), python (<< 2.8), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libopenbabel4, libstdc++6 (>= 4.6) Description: Chemical toolbox library (python bindings) Homepage: http://openbabel.sourceforge.net Description-md5: 57cf6f15a20d7f43a2bf1b500de1a380 Tag: devel::lang:python, field::chemistry, implemented-in::c++, role::shared-lib Section: python Priority: optional Filename: pool/main/o/openbabel/python-openbabel_2.3.1+dfsg-4_amd64.deb Size: 1731456 MD5sum: 3d9f360afc2164ef8dcf9d1b85d14e7f SHA1: b9e9937674c8eb7683033d93347f4e1b44503115 SHA256: 7547c5dbf26eda9fea4b38c307b5e9baf1aa19dfc46a3db048e5a048d06d6f01 [wheezy-lts] Package: python-openbabel Source: openbabel Version: 2.3.1+dfsg-4 Installed-Size: 6946 Maintainer: Debichem Team Architecture: amd64 Provides: python2.6-openbabel, python2.7-openbabel Depends: python2.7 | python2.6, python (>= 2.6.6-7~), python (<< 2.8), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libopenbabel4, libstdc++6 (>= 4.6) Description: Chemical toolbox library (python bindings) Homepage: http://openbabel.sourceforge.net Description-md5: 57cf6f15a20d7f43a2bf1b500de1a380 Tag: devel::lang:python, field::chemistry, implemented-in::c++, role::shared-lib Section: python Priority: optional Filename: pool/main/o/openbabel/python-openbabel_2.3.1+dfsg-4_amd64.deb Size: 1731456 MD5sum: 3d9f360afc2164ef8dcf9d1b85d14e7f SHA1: b9e9937674c8eb7683033d93347f4e1b44503115 SHA256: 7547c5dbf26eda9fea4b38c307b5e9baf1aa19dfc46a3db048e5a048d06d6f01 Executing: sudo env PYTHONPATH=/srv/piuparts.debian.org/lib/python2.7/dist-packages timeout -s INT -k 5m 80m /srv/piuparts.debian.org/sbin/piuparts --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d wheezy-lts -B reference-chroot-metadata.dat --apt python-openbabel=2.3.1+dfsg-4 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: To quickly glance what went wrong, scroll down to the bottom of this logfile. 0m0.0s INFO: FAQ available at https://wiki.debian.org/piuparts/FAQ 0m0.0s INFO: The FAQ also explains how to contact us in case you think piuparts is wrong. 0m0.0s INFO: ------------------------------------------------------------------------------ 0m0.0s INFO: piuparts version 0.93~201809241020~0.92-22-g1ffcf128 starting up. 0m0.0s INFO: Command line arguments: /srv/piuparts.debian.org/sbin/piuparts --warn-on-others --scriptsdir /etc/piuparts/scripts --no-eatmydata --allow-database --warn-on-leftovers-after-purge --skip-logrotatefiles-test --scriptsdir /etc/piuparts/scripts-wheezy --warn-on-debsums-errors --warn-on-install-over-symlink --mirror 'http://mirror-ubc.debian.org/debian/ main' --tmpdir /srv/piuparts.debian.org/tmp --arch amd64 -b /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz -d wheezy -d wheezy-lts -B reference-chroot-metadata.dat --apt python-openbabel=2.3.1+dfsg-4 0m0.0s INFO: Running on: Linux piu-slave-ubc-01 4.9.0-8-amd64 #1 SMP Debian 4.9.110-3+deb9u5 (2018-09-30) x86_64 0m0.0s DEBUG: Created temporary directory /srv/piuparts.debian.org/tmp/tmpysOdRB 0m0.0s DEBUG: Unpacking /srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz into /srv/piuparts.debian.org/tmp/tmpysOdRB 0m0.0s DEBUG: Starting command: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpysOdRB', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.5s DEBUG: Command ok: ['tar', '-C', '/srv/piuparts.debian.org/tmp/tmpysOdRB', '-zxf', '/srv/piuparts.debian.org/slave/basetgz/wheezy_amd64.tar.gz'] 0m1.5s DEBUG: Starting command: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpysOdRB/proc'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'proc', 'proc', '/srv/piuparts.debian.org/tmp/tmpysOdRB/proc'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/pts'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'devpts', '-o', 'newinstance,noexec,nosuid,gid=5,mode=0620,ptmxmode=0666', 'devpts', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/pts'] 0m1.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/ptmx'] 0m1.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/pts/ptmx', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/ptmx'] 0m1.6s DEBUG: Starting command: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/console'] 0m1.6s DEBUG: Command ok: ['mount', '-o', 'bind', '/dev/pts/4', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/console'] 0m1.6s DEBUG: Starting command: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpysOdRB/run/shm'] 0m1.6s DEBUG: Command ok: ['mount', '-t', 'tmpfs', '-o', 'size=65536k', 'tmpfs', '/srv/piuparts.debian.org/tmp/tmpysOdRB/run/shm'] 0m1.6s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ wheezy main 0m1.6s DEBUG: Created policy-rc.d and chmodded it. 0m1.6s DEBUG: Created resolv.conf. 0m1.6s DEBUG: Copying scriptsdir /etc/piuparts/scripts to /srv/piuparts.debian.org/tmp/tmpysOdRB/tmp/scripts/ 0m1.6s DEBUG: Copying scriptsdir /etc/piuparts/scripts-wheezy to /srv/piuparts.debian.org/tmp/tmpysOdRB/tmp/scripts/ 0m1.6s INFO: Running scripts post_chroot_unpack 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_chroot_unpack_allow_unauthenticated'] 0m1.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', 'update'] 0m3.5s DUMP: Hit http://mirror-ubc.debian.org wheezy Release.gpg Hit http://mirror-ubc.debian.org wheezy Release Hit http://mirror-ubc.debian.org wheezy/main amd64 Packages Hit http://mirror-ubc.debian.org wheezy/main Translation-en Reading package lists... 0m3.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', 'update'] 0m3.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-yf', 'dist-upgrade'] 0m3.7s DUMP: Reading package lists... Building dependency tree... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m3.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-yf', 'dist-upgrade'] 0m3.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s DUMP: 0c96df6df725ee7ec7aebd2b6a77fb72 - 0m3.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m3.8s INFO: Running scripts post_setup 0m3.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_dummy_users'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_dummy_users'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_forbid_home'] 0m4.5s DUMP: Disabling /home Adding 'local diversion of /home to /home.distrib' 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_forbid_home'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.5s DUMP: Enabling dpkg --force-unsafe-io. Adding 'local diversion of /bin/sync to /bin/sync.distrib' `/bin/sync' -> `true' 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_force-unsafe-io'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_minimize'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_minimize'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_squeeze-backports'] 0m4.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m5.3s DUMP: *** Adding fake essential packages *** Reading package lists... Building dependency tree... Suggested packages: perl-modules The following NEW packages will be installed: adduser ucf 0 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 335 kB of archives. After this operation, 1327 kB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main adduser all 3.113+nmu3 [264 kB] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main ucf all 3.0025+nmu3 [70.8 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 335 kB in 0s (20.2 MB/s) Selecting previously unselected package adduser. (Reading database ... 6639 files and directories currently installed.) Unpacking adduser (from .../adduser_3.113+nmu3_all.deb) ... Selecting previously unselected package ucf. Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ... Moving old data out of the way Setting up adduser (3.113+nmu3) ... Setting up ucf (3.0025+nmu3) ... 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_wheezy-fake-essential'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_zz_backports'] 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_setup_zz_backports'] 0m5.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.3s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u3 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u7 install ok installed gpgv gpgv 1.4.12-7+deb7u7 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u10 install ok installed libc6:amd64 libc6 2.13-38+deb7u10 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed login login 1:4.1.5.1-1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u10 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1 install ok installed perl-base perl-base 5.14.2-21+deb7u3 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1 install ok installed tzdata tzdata 2016d-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m5.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m5.3s DEBUG: Loading chroot meta data from reference-chroot-metadata.dat 0m5.9s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m6.4s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m6.4s INFO: Running scripts is_testable 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/is_testable_uninstallable'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/is_testable_uninstallable'] 0m6.4s INFO: Running scripts pre_test 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_test_exceptions'] 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_test_exceptions'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_test_root_password'] 0m6.4s DUMP: Enter new UNIX password: Retype new UNIX password: passwd: password updated successfully 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_test_root_password'] 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'show', '--no-all-versions', 'python-openbabel'] 0m6.4s DUMP: Package: python-openbabel Source: openbabel Version: 2.3.1+dfsg-4 Installed-Size: 6946 Maintainer: Debichem Team Architecture: amd64 Provides: python2.6-openbabel, python2.7-openbabel Depends: python2.7 | python2.6, python (>= 2.6.6-7~), python (<< 2.8), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libopenbabel4, libstdc++6 (>= 4.6) Description-en: Chemical toolbox library (python bindings) Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It allows one to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. Features include: . * Hydrogen addition and deletion * Support for Molecular Mechanics * Support for SMARTS molecular matching syntax * Automatic feature perception (rings, bonds, hybridization, aromaticity) * Flexible atom typer and perception of multiple bonds from atomic coordinates * Gasteiger-Marsili partial charge calculation . File formats Open Babel supports include PDB, XYZ, CIF, CML, SMILES, MDL Molfile, ChemDraw, Gaussian, GAMESS, MOPAC and MPQC. . This package contains the Python binding. Homepage: http://openbabel.sourceforge.net Description-md5: 57cf6f15a20d7f43a2bf1b500de1a380 Tag: devel::lang:python, field::chemistry, implemented-in::c++, role::shared-lib Section: python Priority: optional Filename: pool/main/o/openbabel/python-openbabel_2.3.1+dfsg-4_amd64.deb Size: 1731456 MD5sum: 3d9f360afc2164ef8dcf9d1b85d14e7f SHA1: b9e9937674c8eb7683033d93347f4e1b44503115 SHA256: 7547c5dbf26eda9fea4b38c307b5e9baf1aa19dfc46a3db048e5a048d06d6f01 0m6.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'show', '--no-all-versions', 'python-openbabel'] 0m6.4s INFO: apt-cache knows about the following packages: python-openbabel 0m6.4s INFO: Running scripts pre_install 0m6.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_database-server'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_database-server'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_exceptions'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_exceptions'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_extras'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_extras'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy'] 0m6.5s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m6.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy'] 0m6.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy', 'python-openbabel'] 0m6.6s DUMP: python-openbabel: Installed: (none) Candidate: 2.3.1+dfsg-4 Version table: 2.3.1+dfsg-4 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 0m6.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy', 'python-openbabel'] 0m6.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-y', 'install', 'python-openbabel'] 0m11.0s DUMP: Reading package lists... Building dependency tree... Reading state information... The following extra packages will be installed: fontconfig-config libcairo2 libexpat1 libfontconfig1 libfreetype6 libncursesw5 libopenbabel4 libpixman-1-0 libpng12-0 libsqlite3-0 libssl1.0.0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxml2 libxrender1 mime-support python python-minimal python2.7 python2.7-minimal ttf-dejavu-core Suggested packages: python-doc python-tk python2.7-doc binutils binfmt-support Recommended packages: libgpm2 xml-core file The following NEW packages will be installed: fontconfig-config libcairo2 libexpat1 libfontconfig1 libfreetype6 libncursesw5 libopenbabel4 libpixman-1-0 libpng12-0 libsqlite3-0 libssl1.0.0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxml2 libxrender1 mime-support python python-minimal python-openbabel python2.7 python2.7-minimal ttf-dejavu-core 0 upgraded, 27 newly installed, 0 to remove and 0 not upgraded. Need to get 18.2 MB of archives. After this operation, 51.1 MB of additional disk space will be used. Get:1 http://mirror-ubc.debian.org/debian/ wheezy/main libncursesw5 amd64 5.9-10 [141 kB] Get:2 http://mirror-ubc.debian.org/debian/ wheezy/main libssl1.0.0 amd64 1.0.1e-2+deb7u20 [1263 kB] Get:3 http://mirror-ubc.debian.org/debian/ wheezy/main libsqlite3-0 amd64 3.7.13-1+deb7u2 [454 kB] Get:4 http://mirror-ubc.debian.org/debian/ wheezy/main libxml2 amd64 2.8.0+dfsg1-7+wheezy5 [906 kB] Get:5 http://mirror-ubc.debian.org/debian/ wheezy/main libexpat1 amd64 2.1.0-1+deb7u2 [139 kB] Get:6 http://mirror-ubc.debian.org/debian/ wheezy/main libfreetype6 amd64 2.4.9-1.1+deb7u3 [452 kB] Get:7 http://mirror-ubc.debian.org/debian/ wheezy/main ttf-dejavu-core all 2.33-3 [1021 kB] Get:8 http://mirror-ubc.debian.org/debian/ wheezy/main fontconfig-config all 2.9.0-7.1 [233 kB] Get:9 http://mirror-ubc.debian.org/debian/ wheezy/main libfontconfig1 amd64 2.9.0-7.1 [300 kB] Get:10 http://mirror-ubc.debian.org/debian/ wheezy/main libpixman-1-0 amd64 0.26.0-4+deb7u2 [427 kB] Get:11 http://mirror-ubc.debian.org/debian/ wheezy/main libpng12-0 amd64 1.2.49-1+deb7u2 [191 kB] Get:12 http://mirror-ubc.debian.org/debian/ wheezy/main libxau6 amd64 1:1.0.7-1 [18.8 kB] Get:13 http://mirror-ubc.debian.org/debian/ wheezy/main libxdmcp6 amd64 1:1.1.1-1 [26.3 kB] Get:14 http://mirror-ubc.debian.org/debian/ wheezy/main libxcb1 amd64 1.8.1-2+deb7u1 [50.2 kB] Get:15 http://mirror-ubc.debian.org/debian/ wheezy/main libx11-data all 2:1.5.0-1+deb7u2 [194 kB] Get:16 http://mirror-ubc.debian.org/debian/ wheezy/main libx11-6 amd64 2:1.5.0-1+deb7u2 [901 kB] Get:17 http://mirror-ubc.debian.org/debian/ wheezy/main libxcb-render0 amd64 1.8.1-2+deb7u1 [18.6 kB] Get:18 http://mirror-ubc.debian.org/debian/ wheezy/main libxcb-shm0 amd64 1.8.1-2+deb7u1 [10.4 kB] Get:19 http://mirror-ubc.debian.org/debian/ wheezy/main libxrender1 amd64 1:0.9.7-1+deb7u2 [32.9 kB] Get:20 http://mirror-ubc.debian.org/debian/ wheezy/main libcairo2 amd64 1.12.2-3 [912 kB] Get:21 http://mirror-ubc.debian.org/debian/ wheezy/main mime-support all 3.52-1+deb7u1 [35.5 kB] Get:22 http://mirror-ubc.debian.org/debian/ wheezy/main python2.7-minimal amd64 2.7.3-6+deb7u2 [1785 kB] Get:23 http://mirror-ubc.debian.org/debian/ wheezy/main python2.7 amd64 2.7.3-6+deb7u2 [2728 kB] Get:24 http://mirror-ubc.debian.org/debian/ wheezy/main python-minimal all 2.7.3-4+deb7u1 [42.8 kB] Get:25 http://mirror-ubc.debian.org/debian/ wheezy/main python all 2.7.3-4+deb7u1 [181 kB] Get:26 http://mirror-ubc.debian.org/debian/ wheezy/main libopenbabel4 amd64 2.3.1+dfsg-4 [4050 kB] Get:27 http://mirror-ubc.debian.org/debian/ wheezy/main python-openbabel amd64 2.3.1+dfsg-4 [1731 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.2 MB in 0s (23.7 MB/s) Selecting previously unselected package libncursesw5:amd64. (Reading database ... 6768 files and directories currently installed.) Unpacking libncursesw5:amd64 (from .../libncursesw5_5.9-10_amd64.deb) ... Selecting previously unselected package libssl1.0.0:amd64. Unpacking libssl1.0.0:amd64 (from .../libssl1.0.0_1.0.1e-2+deb7u20_amd64.deb) ... Selecting previously unselected package libsqlite3-0:amd64. Unpacking libsqlite3-0:amd64 (from .../libsqlite3-0_3.7.13-1+deb7u2_amd64.deb) ... Selecting previously unselected package libxml2:amd64. Unpacking libxml2:amd64 (from .../libxml2_2.8.0+dfsg1-7+wheezy5_amd64.deb) ... Selecting previously unselected package libexpat1:amd64. Unpacking libexpat1:amd64 (from .../libexpat1_2.1.0-1+deb7u2_amd64.deb) ... Selecting previously unselected package libfreetype6:amd64. Unpacking libfreetype6:amd64 (from .../libfreetype6_2.4.9-1.1+deb7u3_amd64.deb) ... Selecting previously unselected package ttf-dejavu-core. Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-3_all.deb) ... Selecting previously unselected package fontconfig-config. Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ... Selecting previously unselected package libfontconfig1:amd64. Unpacking libfontconfig1:amd64 (from .../libfontconfig1_2.9.0-7.1_amd64.deb) ... Selecting previously unselected package libpixman-1-0:amd64. Unpacking libpixman-1-0:amd64 (from .../libpixman-1-0_0.26.0-4+deb7u2_amd64.deb) ... Selecting previously unselected package libpng12-0:amd64. Unpacking libpng12-0:amd64 (from .../libpng12-0_1.2.49-1+deb7u2_amd64.deb) ... Selecting previously unselected package libxau6:amd64. Unpacking libxau6:amd64 (from .../libxau6_1%3a1.0.7-1_amd64.deb) ... Selecting previously unselected package libxdmcp6:amd64. Unpacking libxdmcp6:amd64 (from .../libxdmcp6_1%3a1.1.1-1_amd64.deb) ... Selecting previously unselected package libxcb1:amd64. Unpacking libxcb1:amd64 (from .../libxcb1_1.8.1-2+deb7u1_amd64.deb) ... Selecting previously unselected package libx11-data. Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1+deb7u2_all.deb) ... Selecting previously unselected package libx11-6:amd64. Unpacking libx11-6:amd64 (from .../libx11-6_2%3a1.5.0-1+deb7u2_amd64.deb) ... Selecting previously unselected package libxcb-render0:amd64. Unpacking libxcb-render0:amd64 (from .../libxcb-render0_1.8.1-2+deb7u1_amd64.deb) ... Selecting previously unselected package libxcb-shm0:amd64. Unpacking libxcb-shm0:amd64 (from .../libxcb-shm0_1.8.1-2+deb7u1_amd64.deb) ... Selecting previously unselected package libxrender1:amd64. Unpacking libxrender1:amd64 (from .../libxrender1_1%3a0.9.7-1+deb7u2_amd64.deb) ... Selecting previously unselected package libcairo2:amd64. Unpacking libcairo2:amd64 (from .../libcairo2_1.12.2-3_amd64.deb) ... Selecting previously unselected package mime-support. Unpacking mime-support (from .../mime-support_3.52-1+deb7u1_all.deb) ... Selecting previously unselected package python2.7-minimal. Unpacking python2.7-minimal (from .../python2.7-minimal_2.7.3-6+deb7u2_amd64.deb) ... Selecting previously unselected package python2.7. Unpacking python2.7 (from .../python2.7_2.7.3-6+deb7u2_amd64.deb) ... Selecting previously unselected package python-minimal. Unpacking python-minimal (from .../python-minimal_2.7.3-4+deb7u1_all.deb) ... Selecting previously unselected package python. Unpacking python (from .../python_2.7.3-4+deb7u1_all.deb) ... Selecting previously unselected package libopenbabel4. Unpacking libopenbabel4 (from .../libopenbabel4_2.3.1+dfsg-4_amd64.deb) ... Selecting previously unselected package python-openbabel. Unpacking python-openbabel (from .../python-openbabel_2.3.1+dfsg-4_amd64.deb) ... Setting up libncursesw5:amd64 (5.9-10) ... Setting up libssl1.0.0:amd64 (1.0.1e-2+deb7u20) ... Setting up libsqlite3-0:amd64 (3.7.13-1+deb7u2) ... Setting up libxml2:amd64 (2.8.0+dfsg1-7+wheezy5) ... Setting up libexpat1:amd64 (2.1.0-1+deb7u2) ... Setting up libfreetype6:amd64 (2.4.9-1.1+deb7u3) ... Setting up ttf-dejavu-core (2.33-3) ... Setting up fontconfig-config (2.9.0-7.1) ... Setting up libfontconfig1:amd64 (2.9.0-7.1) ... Setting up libpixman-1-0:amd64 (0.26.0-4+deb7u2) ... Setting up libpng12-0:amd64 (1.2.49-1+deb7u2) ... Setting up libxau6:amd64 (1:1.0.7-1) ... Setting up libxdmcp6:amd64 (1:1.1.1-1) ... Setting up libxcb1:amd64 (1.8.1-2+deb7u1) ... Setting up libx11-data (2:1.5.0-1+deb7u2) ... Setting up libx11-6:amd64 (2:1.5.0-1+deb7u2) ... Setting up libxcb-render0:amd64 (1.8.1-2+deb7u1) ... Setting up libxcb-shm0:amd64 (1.8.1-2+deb7u1) ... Setting up libxrender1:amd64 (1:0.9.7-1+deb7u2) ... Setting up libcairo2:amd64 (1.12.2-3) ... Setting up mime-support (3.52-1+deb7u1) ... update-alternatives: using /usr/bin/see to provide /usr/bin/view (view) in auto mode Setting up python2.7-minimal (2.7.3-6+deb7u2) ... Setting up python2.7 (2.7.3-6+deb7u2) ... Setting up python-minimal (2.7.3-4+deb7u1) ... Setting up python (2.7.3-4+deb7u1) ... Setting up libopenbabel4 (2.3.1+dfsg-4) ... Setting up python-openbabel (2.3.1+dfsg-4) ... 0m11.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-y', 'install', 'python-openbabel'] 0m11.0s INFO: Running scripts post_install 0m11.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_install_exceptions'] 0m11.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_install_exceptions'] 0m11.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m11.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m11.7s DEBUG: Upgrading /srv/piuparts.debian.org/tmp/tmpysOdRB to wheezy-lts 0m11.7s DEBUG: sources.list: deb http://mirror-ubc.debian.org/debian/ wheezy main deb http://security.debian.org wheezy/updates main 0m11.7s INFO: Running scripts pre_distupgrade 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_allow_unauthenticated'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_exceptions'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_foreign_architecture_i386'] 0m11.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_wheezy'] 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_wheezy'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_zz_database-server'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m11.8s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_distupgrade_zz_upgrade_early'] 0m11.8s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', 'update'] 0m14.0s DUMP: Hit http://mirror-ubc.debian.org wheezy Release.gpg Hit http://mirror-ubc.debian.org wheezy Release Hit http://mirror-ubc.debian.org wheezy/main amd64 Packages Hit http://mirror-ubc.debian.org wheezy/main Translation-en Get:1 http://security.debian.org wheezy/updates Release.gpg [1601 B] Get:2 http://security.debian.org wheezy/updates Release [52.3 kB] Get:3 http://security.debian.org wheezy/updates/main amd64 Packages [589 kB] Get:4 http://security.debian.org wheezy/updates/main Translation-en [338 kB] Fetched 981 kB in 1s (917 kB/s) Reading package lists... 0m14.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', 'update'] 0m14.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-yf', 'dist-upgrade'] 0m23.3s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be upgraded: bash fontconfig-config gnupg gpgv libc-bin libc6 libcairo2 libdb5.1 libexpat1 libfontconfig1 libfreetype6 libsqlite3-0 libssl1.0.0 libx11-6 libx11-data libxml2 libxrender1 login multiarch-support passwd perl-base python2.7 python2.7-minimal sensible-utils tar tzdata 26 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 25.6 MB of archives. After this operation, 892 kB of additional disk space will be used. Get:1 http://security.debian.org/ wheezy/updates/main bash amd64 4.2+dfsg-0.1+deb7u4 [1499 kB] Get:2 http://security.debian.org/ wheezy/updates/main login amd64 1:4.1.5.1-1+deb7u1 [984 kB] Get:3 http://security.debian.org/ wheezy/updates/main perl-base amd64 5.14.2-21+deb7u6 [1534 kB] Get:4 http://security.debian.org/ wheezy/updates/main tar amd64 1.26+dfsg-0.1+deb7u1 [984 kB] Get:5 http://security.debian.org/ wheezy/updates/main libc-bin amd64 2.13-38+deb7u12 [1275 kB] Get:6 http://security.debian.org/ wheezy/updates/main libc6 amd64 2.13-38+deb7u12 [4226 kB] Get:7 http://security.debian.org/ wheezy/updates/main libdb5.1 amd64 5.1.29-5+deb7u1 [723 kB] Get:8 http://security.debian.org/ wheezy/updates/main libssl1.0.0 amd64 1.0.1t-1+deb7u4 [1279 kB] Get:9 http://security.debian.org/ wheezy/updates/main libexpat1 amd64 2.1.0-1+deb7u5 [139 kB] Get:10 http://security.debian.org/ wheezy/updates/main libfreetype6 amd64 2.4.9-1.1+deb7u7 [454 kB] Get:11 http://security.debian.org/ wheezy/updates/main libfontconfig1 amd64 2.9.0-7.1+deb7u1 [300 kB] Get:12 http://security.debian.org/ wheezy/updates/main fontconfig-config all 2.9.0-7.1+deb7u1 [233 kB] Get:13 http://security.debian.org/ wheezy/updates/main libx11-data all 2:1.5.0-1+deb7u4 [189 kB] Get:14 http://security.debian.org/ wheezy/updates/main libx11-6 amd64 2:1.5.0-1+deb7u4 [902 kB] Get:15 http://security.debian.org/ wheezy/updates/main libxrender1 amd64 1:0.9.7-1+deb7u3 [33.5 kB] Get:16 http://security.debian.org/ wheezy/updates/main libcairo2 amd64 1.12.2-3+deb7u1 [912 kB] Get:17 http://security.debian.org/ wheezy/updates/main libsqlite3-0 amd64 3.7.13-1+deb7u4 [454 kB] Get:18 http://security.debian.org/ wheezy/updates/main libxml2 amd64 2.8.0+dfsg1-7+wheezy12 [907 kB] Get:19 http://security.debian.org/ wheezy/updates/main gpgv amd64 1.4.12-7+deb7u9 [229 kB] Get:20 http://security.debian.org/ wheezy/updates/main gnupg amd64 1.4.12-7+deb7u9 [1954 kB] Get:21 http://security.debian.org/ wheezy/updates/main passwd amd64 1:4.1.5.1-1+deb7u1 [1262 kB] Get:22 http://security.debian.org/ wheezy/updates/main sensible-utils all 0.0.7+deb7u1 [9000 B] Get:23 http://security.debian.org/ wheezy/updates/main tzdata all 2018e-0+deb7u1 [496 kB] Get:24 http://security.debian.org/ wheezy/updates/main multiarch-support amd64 2.13-38+deb7u12 [152 kB] Get:25 http://security.debian.org/ wheezy/updates/main python2.7 amd64 2.7.3-6+deb7u4 [2731 kB] Get:26 http://security.debian.org/ wheezy/updates/main python2.7-minimal amd64 2.7.3-6+deb7u4 [1786 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.6 MB in 2s (11.3 MB/s) (Reading database ... 8260 files and directories currently installed.) Preparing to replace bash 4.2+dfsg-0.1+deb7u3 (using .../bash_4.2+dfsg-0.1+deb7u4_amd64.deb) ... Unpacking replacement bash ... Setting up bash (4.2+dfsg-0.1+deb7u4) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 8260 files and directories currently installed.) Preparing to replace login 1:4.1.5.1-1 (using .../login_1%3a4.1.5.1-1+deb7u1_amd64.deb) ... Unpacking replacement login ... Setting up login (1:4.1.5.1-1+deb7u1) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace perl-base 5.14.2-21+deb7u3 (using .../perl-base_5.14.2-21+deb7u6_amd64.deb) ... Unpacking replacement perl-base ... Setting up perl-base (5.14.2-21+deb7u6) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace tar 1.26+dfsg-0.1 (using .../tar_1.26+dfsg-0.1+deb7u1_amd64.deb) ... Unpacking replacement tar ... Processing triggers for mime-support ... Setting up tar (1.26+dfsg-0.1+deb7u1) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace libc-bin 2.13-38+deb7u10 (using .../libc-bin_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc-bin ... Setting up libc-bin (2.13-38+deb7u12) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace libc6:amd64 2.13-38+deb7u10 (using .../libc6_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement libc6:amd64 ... Setting up libc6:amd64 (2.13-38+deb7u12) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace libdb5.1:amd64 5.1.29-5 (using .../libdb5.1_5.1.29-5+deb7u1_amd64.deb) ... Unpacking replacement libdb5.1:amd64 ... Setting up libdb5.1:amd64 (5.1.29-5+deb7u1) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace libssl1.0.0:amd64 1.0.1e-2+deb7u20 (using .../libssl1.0.0_1.0.1t-1+deb7u4_amd64.deb) ... Unpacking replacement libssl1.0.0:amd64 ... Preparing to replace libexpat1:amd64 2.1.0-1+deb7u2 (using .../libexpat1_2.1.0-1+deb7u5_amd64.deb) ... Unpacking replacement libexpat1:amd64 ... Preparing to replace libfreetype6:amd64 2.4.9-1.1+deb7u3 (using .../libfreetype6_2.4.9-1.1+deb7u7_amd64.deb) ... Unpacking replacement libfreetype6:amd64 ... Preparing to replace libfontconfig1:amd64 2.9.0-7.1 (using .../libfontconfig1_2.9.0-7.1+deb7u1_amd64.deb) ... Unpacking replacement libfontconfig1:amd64 ... Preparing to replace fontconfig-config 2.9.0-7.1 (using .../fontconfig-config_2.9.0-7.1+deb7u1_all.deb) ... Unpacking replacement fontconfig-config ... Preparing to replace libx11-data 2:1.5.0-1+deb7u2 (using .../libx11-data_2%3a1.5.0-1+deb7u4_all.deb) ... Unpacking replacement libx11-data ... Preparing to replace libx11-6:amd64 2:1.5.0-1+deb7u2 (using .../libx11-6_2%3a1.5.0-1+deb7u4_amd64.deb) ... Unpacking replacement libx11-6:amd64 ... Preparing to replace libxrender1:amd64 1:0.9.7-1+deb7u2 (using .../libxrender1_1%3a0.9.7-1+deb7u3_amd64.deb) ... Unpacking replacement libxrender1:amd64 ... Preparing to replace libcairo2:amd64 1.12.2-3 (using .../libcairo2_1.12.2-3+deb7u1_amd64.deb) ... Unpacking replacement libcairo2:amd64 ... Preparing to replace libsqlite3-0:amd64 3.7.13-1+deb7u2 (using .../libsqlite3-0_3.7.13-1+deb7u4_amd64.deb) ... Unpacking replacement libsqlite3-0:amd64 ... Preparing to replace libxml2:amd64 2.8.0+dfsg1-7+wheezy5 (using .../libxml2_2.8.0+dfsg1-7+wheezy12_amd64.deb) ... Unpacking replacement libxml2:amd64 ... Preparing to replace gpgv 1.4.12-7+deb7u7 (using .../gpgv_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gpgv ... Setting up gpgv (1.4.12-7+deb7u9) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace gnupg 1.4.12-7+deb7u7 (using .../gnupg_1.4.12-7+deb7u9_amd64.deb) ... Unpacking replacement gnupg ... Setting up gnupg (1.4.12-7+deb7u9) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace passwd 1:4.1.5.1-1 (using .../passwd_1%3a4.1.5.1-1+deb7u1_amd64.deb) ... Unpacking replacement passwd ... Setting up passwd (1:4.1.5.1-1+deb7u1) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace sensible-utils 0.0.7 (using .../sensible-utils_0.0.7+deb7u1_all.deb) ... Unpacking replacement sensible-utils ... Processing triggers for mime-support ... Setting up sensible-utils (0.0.7+deb7u1) ... (Reading database ... 8260 files and directories currently installed.) Preparing to replace tzdata 2016d-0+deb7u1 (using .../tzdata_2018e-0+deb7u1_all.deb) ... Unpacking replacement tzdata ... Setting up tzdata (2018e-0+deb7u1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Oct 3 14:03:41 UTC 2018. Universal Time is now: Wed Oct 3 14:03:41 UTC 2018. Run 'dpkg-reconfigure tzdata' if you wish to change it. (Reading database ... 8272 files and directories currently installed.) Preparing to replace multiarch-support 2.13-38+deb7u10 (using .../multiarch-support_2.13-38+deb7u12_amd64.deb) ... Unpacking replacement multiarch-support ... Setting up multiarch-support (2.13-38+deb7u12) ... (Reading database ... 8272 files and directories currently installed.) Preparing to replace python2.7 2.7.3-6+deb7u2 (using .../python2.7_2.7.3-6+deb7u4_amd64.deb) ... Unpacking replacement python2.7 ... Preparing to replace python2.7-minimal 2.7.3-6+deb7u2 (using .../python2.7-minimal_2.7.3-6+deb7u4_amd64.deb) ... Unpacking replacement python2.7-minimal ... Setting up libssl1.0.0:amd64 (1.0.1t-1+deb7u4) ... Setting up libexpat1:amd64 (2.1.0-1+deb7u5) ... Setting up libfreetype6:amd64 (2.4.9-1.1+deb7u7) ... Setting up fontconfig-config (2.9.0-7.1+deb7u1) ... Setting up libfontconfig1:amd64 (2.9.0-7.1+deb7u1) ... Setting up libx11-data (2:1.5.0-1+deb7u4) ... Setting up libx11-6:amd64 (2:1.5.0-1+deb7u4) ... Setting up libxrender1:amd64 (1:0.9.7-1+deb7u3) ... Setting up libcairo2:amd64 (1.12.2-3+deb7u1) ... Setting up libsqlite3-0:amd64 (3.7.13-1+deb7u4) ... Setting up libxml2:amd64 (2.8.0+dfsg1-7+wheezy12) ... Setting up python2.7-minimal (2.7.3-6+deb7u4) ... Setting up python2.7 (2.7.3-6+deb7u4) ... 0m23.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-yf', 'dist-upgrade'] 0m23.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m23.5s DUMP: fb1ccc436f778eea085ae099e3151787 - 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'sh', '-c', 'apt-cache dumpavail | md5sum'] 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'show', '--no-all-versions', 'python-openbabel'] 0m23.5s DUMP: Package: python-openbabel Source: openbabel Version: 2.3.1+dfsg-4 Installed-Size: 6946 Maintainer: Debichem Team Architecture: amd64 Provides: python2.6-openbabel, python2.7-openbabel Depends: python2.7 | python2.6, python (>= 2.6.6-7~), python (<< 2.8), libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libopenbabel4, libstdc++6 (>= 4.6) Description-en: Chemical toolbox library (python bindings) Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It allows one to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. Features include: . * Hydrogen addition and deletion * Support for Molecular Mechanics * Support for SMARTS molecular matching syntax * Automatic feature perception (rings, bonds, hybridization, aromaticity) * Flexible atom typer and perception of multiple bonds from atomic coordinates * Gasteiger-Marsili partial charge calculation . File formats Open Babel supports include PDB, XYZ, CIF, CML, SMILES, MDL Molfile, ChemDraw, Gaussian, GAMESS, MOPAC and MPQC. . This package contains the Python binding. Homepage: http://openbabel.sourceforge.net Description-md5: 57cf6f15a20d7f43a2bf1b500de1a380 Tag: devel::lang:python, field::chemistry, implemented-in::c++, role::shared-lib Section: python Priority: optional Filename: pool/main/o/openbabel/python-openbabel_2.3.1+dfsg-4_amd64.deb Size: 1731456 MD5sum: 3d9f360afc2164ef8dcf9d1b85d14e7f SHA1: b9e9937674c8eb7683033d93347f4e1b44503115 SHA256: 7547c5dbf26eda9fea4b38c307b5e9baf1aa19dfc46a3db048e5a048d06d6f01 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'show', '--no-all-versions', 'python-openbabel'] 0m23.5s INFO: apt-cache knows about the following packages: python-openbabel 0m23.5s INFO: Running scripts pre_install 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_database-server'] 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_database-server'] 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_exceptions'] 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_exceptions'] 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_extras'] 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_extras'] 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture'] 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture'] 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m23.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m23.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy'] 0m23.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main Translation-en 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m23.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy'] 0m23.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy', 'python-openbabel'] 0m23.6s DUMP: python-openbabel: Installed: 2.3.1+dfsg-4 Candidate: 2.3.1+dfsg-4 Version table: *** 2.3.1+dfsg-4 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 100 /var/lib/dpkg/status 0m23.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy', 'python-openbabel'] 0m23.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-y', 'install', 'python-openbabel'] 0m23.9s DUMP: Reading package lists... Building dependency tree... Reading state information... python-openbabel is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m23.9s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-y', 'install', 'python-openbabel'] 0m23.9s INFO: Running scripts post_install 0m23.9s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_install_exceptions'] 0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_install_exceptions'] 0m24.0s INFO: Running scripts post_distupgrade 0m24.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_base_cleanup'] 0m24.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_exceptions'] 0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_exceptions'] 0m24.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_force-unsafe-io'] 0m24.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_squeeze-backports'] 0m24.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_zz_backports'] 0m24.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_distupgrade_zz_backports'] 0m24.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m24.7s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m24.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m25.5s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m25.5s INFO: Running scripts pre_install 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_database-server'] 0m25.5s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_database-server'] 0m25.5s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_exceptions'] 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_exceptions'] 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_extras'] 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_extras'] 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture'] 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture'] 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_install_foreign_architecture_i386'] 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy'] 0m25.6s DUMP: Package files: 100 /var/lib/dpkg/status release a=now 500 http://security.debian.org/ wheezy/updates/main Translation-en 500 http://security.debian.org/ wheezy/updates/main amd64 Packages release v=7.0,o=Debian,a=oldoldstable,n=wheezy,l=Debian-Security,c=main origin security.debian.org 500 http://mirror-ubc.debian.org/debian/ wheezy/main Translation-en 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages release v=7.11,o=Debian,a=oldoldstable,n=wheezy,l=Debian,c=main origin mirror-ubc.debian.org Pinned packages: 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy'] 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy', 'python-openbabel'] 0m25.6s DUMP: python-openbabel: Installed: 2.3.1+dfsg-4 Candidate: 2.3.1+dfsg-4 Version table: *** 2.3.1+dfsg-4 0 500 http://mirror-ubc.debian.org/debian/ wheezy/main amd64 Packages 100 /var/lib/dpkg/status 0m25.6s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-cache', 'policy', 'python-openbabel'] 0m25.6s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-y', 'install', 'python-openbabel=2.3.1+dfsg-4'] 0m26.0s DUMP: Reading package lists... Building dependency tree... Reading state information... python-openbabel is already the newest version. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. 0m26.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', '-y', 'install', 'python-openbabel=2.3.1+dfsg-4'] 0m26.0s INFO: Running scripts post_install 0m26.0s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_install_exceptions'] 0m26.0s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_install_exceptions'] 0m26.0s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m26.6s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m26.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m26.7s DUMP: install ok installed adduser adduser 3.113+nmu3 install ok installed apt apt 0.9.7.9+deb7u7 install ok installed base-files base-files 7.1wheezy11 install ok installed base-passwd base-passwd 3.5.26 install ok installed bash bash 4.2+dfsg-0.1+deb7u4 install ok installed bsdutils bsdutils 1:2.20.1-5.3 install ok installed coreutils coreutils 8.13-3.5 install ok installed dash dash 0.5.7-3 install ok installed debconf debconf 1.5.49 install ok installed debconf-i18n debconf-i18n 1.5.49 install ok installed debian-archive-keyring debian-archive-keyring 2014.3~deb7u1 install ok installed debianutils debianutils 4.3.2 install ok installed diffutils diffutils 1:3.2-6 install ok installed dpkg dpkg 1.16.18 install ok installed e2fslibs:amd64 e2fslibs 1.42.5-1.1+deb7u1 install ok installed e2fsprogs e2fsprogs 1.42.5-1.1+deb7u1 install ok installed findutils findutils 4.4.2-4 install ok installed fontconfig-config fontconfig-config 2.9.0-7.1+deb7u1 install ok installed gcc-4.7-base:amd64 gcc-4.7-base 4.7.2-5 install ok installed gnupg gnupg 1.4.12-7+deb7u9 install ok installed gpgv gpgv 1.4.12-7+deb7u9 install ok installed grep grep 2.12-2 install ok installed gzip gzip 1.5-1.1 install ok installed hostname hostname 3.11 install ok installed initscripts initscripts 2.88dsf-41+deb7u1 install ok installed insserv insserv 1.14.0-5 install ok installed libacl1:amd64 libacl1 2.2.51-8 install ok installed libapt-pkg4.12:amd64 libapt-pkg4.12 0.9.7.9+deb7u7 install ok installed libattr1:amd64 libattr1 1:2.4.46-8 install ok installed libblkid1:amd64 libblkid1 2.20.1-5.3 install ok installed libbz2-1.0:amd64 libbz2-1.0 1.0.6-4 install ok installed libc-bin libc-bin 2.13-38+deb7u12 install ok installed libc6:amd64 libc6 2.13-38+deb7u12 install ok installed libcairo2:amd64 libcairo2 1.12.2-3+deb7u1 install ok installed libcomerr2:amd64 libcomerr2 1.42.5-1.1+deb7u1 install ok installed libdb5.1:amd64 libdb5.1 5.1.29-5+deb7u1 install ok installed libexpat1:amd64 libexpat1 2.1.0-1+deb7u5 install ok installed libfontconfig1:amd64 libfontconfig1 2.9.0-7.1+deb7u1 install ok installed libfreetype6:amd64 libfreetype6 2.4.9-1.1+deb7u7 install ok installed libgcc1:amd64 libgcc1 1:4.7.2-5 install ok installed liblocale-gettext-perl liblocale-gettext-perl 1.05-7+b1 install ok installed liblzma5:amd64 liblzma5 5.1.1alpha+20120614-2 install ok installed libmount1 libmount1 2.20.1-5.3 install ok installed libncurses5:amd64 libncurses5 5.9-10 install ok installed libncursesw5:amd64 libncursesw5 5.9-10 install ok installed libopenbabel4 libopenbabel4 2.3.1+dfsg-4 install ok installed libpam-modules:amd64 libpam-modules 1.1.3-7.1 install ok installed libpam-modules-bin libpam-modules-bin 1.1.3-7.1 install ok installed libpam-runtime libpam-runtime 1.1.3-7.1 install ok installed libpam0g:amd64 libpam0g 1.1.3-7.1 install ok installed libpixman-1-0:amd64 libpixman-1-0 0.26.0-4+deb7u2 install ok installed libpng12-0:amd64 libpng12-0 1.2.49-1+deb7u2 install ok installed libreadline6:amd64 libreadline6 6.2+dfsg-0.1 install ok installed libselinux1:amd64 libselinux1 2.1.9-5 install ok installed libsemanage-common libsemanage-common 2.1.6-6 install ok installed libsemanage1:amd64 libsemanage1 2.1.6-6 install ok installed libsepol1:amd64 libsepol1 2.1.4-3 install ok installed libslang2:amd64 libslang2 2.2.4-15 install ok installed libsqlite3-0:amd64 libsqlite3-0 3.7.13-1+deb7u4 install ok installed libss2:amd64 libss2 1.42.5-1.1+deb7u1 install ok installed libssl1.0.0:amd64 libssl1.0.0 1.0.1t-1+deb7u4 install ok installed libstdc++6:amd64 libstdc++6 4.7.2-5 install ok installed libtext-charwidth-perl libtext-charwidth-perl 0.04-7+b1 install ok installed libtext-iconv-perl libtext-iconv-perl 1.7-5 install ok installed libtext-wrapi18n-perl libtext-wrapi18n-perl 0.06-7 install ok installed libtinfo5:amd64 libtinfo5 5.9-10 install ok installed libusb-0.1-4:amd64 libusb-0.1-4 2:0.1.12-20+nmu1 install ok installed libustr-1.0-1:amd64 libustr-1.0-1 1.0.4-3 install ok installed libuuid1:amd64 libuuid1 2.20.1-5.3 install ok installed libx11-6:amd64 libx11-6 2:1.5.0-1+deb7u4 install ok installed libx11-data libx11-data 2:1.5.0-1+deb7u4 install ok installed libxau6:amd64 libxau6 1:1.0.7-1 install ok installed libxcb-render0:amd64 libxcb-render0 1.8.1-2+deb7u1 install ok installed libxcb-shm0:amd64 libxcb-shm0 1.8.1-2+deb7u1 install ok installed libxcb1:amd64 libxcb1 1.8.1-2+deb7u1 install ok installed libxdmcp6:amd64 libxdmcp6 1:1.1.1-1 install ok installed libxml2:amd64 libxml2 2.8.0+dfsg1-7+wheezy12 install ok installed libxrender1:amd64 libxrender1 1:0.9.7-1+deb7u3 install ok installed login login 1:4.1.5.1-1+deb7u1 install ok installed lsb-base lsb-base 4.1+Debian8+deb7u1 install ok installed mawk mawk 1.3.3-17 install ok installed mime-support mime-support 3.52-1+deb7u1 install ok installed mount mount 2.20.1-5.3 install ok installed multiarch-support multiarch-support 2.13-38+deb7u12 install ok installed ncurses-base ncurses-base 5.9-10 install ok installed ncurses-bin ncurses-bin 5.9-10 install ok installed passwd passwd 1:4.1.5.1-1+deb7u1 install ok installed perl-base perl-base 5.14.2-21+deb7u6 install ok installed python python 2.7.3-4+deb7u1 install ok installed python-minimal python-minimal 2.7.3-4+deb7u1 install ok installed python-openbabel python-openbabel 2.3.1+dfsg-4 install ok installed python2.7 python2.7 2.7.3-6+deb7u4 install ok installed python2.7-minimal python2.7-minimal 2.7.3-6+deb7u4 install ok installed readline-common readline-common 6.2+dfsg-0.1 install ok installed sed sed 4.2.1-10 install ok installed sensible-utils sensible-utils 0.0.7+deb7u1 install ok installed sysv-rc sysv-rc 2.88dsf-41+deb7u1 install ok installed sysvinit sysvinit 2.88dsf-41+deb7u1 install ok installed sysvinit-utils sysvinit-utils 2.88dsf-41+deb7u1 install ok installed tar tar 1.26+dfsg-0.1+deb7u1 install ok installed ttf-dejavu-core ttf-dejavu-core 2.33-3 install ok installed tzdata tzdata 2018e-0+deb7u1 install ok installed ucf ucf 3.0025+nmu3 install ok installed util-linux util-linux 2.20.1-5.3 install ok installed xz-utils xz-utils 5.1.1alpha+20120614-2 install ok installed zlib1g:amd64 zlib1g 1:1.2.7.dfsg-13 0m26.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg-query', '-W', '-f', '${Status}\\t${binary:Package}\\t${Package}\\t${Version}\\n'] 0m27.2s DEBUG: Starting command: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpysOdRB', '-ac', '--ignore-obsolete'] 0m28.1s DEBUG: Command ok: ['debsums', '--root', '/srv/piuparts.debian.org/tmp/tmpysOdRB', '-ac', '--ignore-obsolete'] 0m28.1s DEBUG: Starting command: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m28.1s DUMP: 0.15.1 0m28.1s DEBUG: Command ok: ['dpkg-query', '-f', '${Version}\n', '-W', 'adequate'] 0m28.1s INFO: Running adequate version 0.15.1 now. 0m28.1s DEBUG: Starting command: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'python-openbabel'] 0m28.2s DEBUG: Command ok: ['adequate', '--root', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'python-openbabel'] 0m28.2s INFO: Running scripts pre_remove 0m28.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_40_find_missing_md5sums'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m28.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_40_find_obsolete_conffiles'] 0m28.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m29.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_40_find_unowned_lib_links'] 0m29.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m29.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_50_find_bad_permissions'] 0m29.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m29.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_50_find_missing_copyright'] 0m29.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_exceptions'] 0m29.4s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/pre_remove_exceptions'] 0m29.4s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', 'remove', 'libx11-data', 'libcairo2:amd64', 'libfreetype6:amd64', 'libx11-6:amd64', 'libfontconfig1:amd64', 'libpixman-1-0:amd64', 'libsqlite3-0:amd64', 'libopenbabel4', 'libssl1.0.0:amd64', 'libxcb1:amd64', 'python', 'libxdmcp6:amd64', 'libexpat1:amd64', 'python2.7', 'libxau6:amd64', 'libxcb-shm0:amd64', 'libpng12-0:amd64', 'libxrender1:amd64', 'mime-support', 'libxml2:amd64', 'python-minimal', 'ttf-dejavu-core', 'libncursesw5:amd64', 'fontconfig-config', 'python2.7-minimal', 'libxcb-render0:amd64', 'python-openbabel'] 0m30.2s DUMP: Reading package lists... Building dependency tree... Reading state information... The following packages will be REMOVED: fontconfig-config libcairo2 libexpat1 libfontconfig1 libfreetype6 libncursesw5 libopenbabel4 libpixman-1-0 libpng12-0 libsqlite3-0 libssl1.0.0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxml2 libxrender1 mime-support python python-minimal python-openbabel python2.7 python2.7-minimal ttf-dejavu-core 0 upgraded, 0 newly installed, 27 to remove and 0 not upgraded. After this operation, 51.4 MB disk space will be freed. (Reading database ... 8272 files and directories currently installed.) Removing python-openbabel ... Removing libopenbabel4 ... Removing libcairo2:amd64 ... Removing libfontconfig1:amd64 ... Removing fontconfig-config ... Removing python ... Removing python2.7 ... Removing libexpat1:amd64 ... Removing libfreetype6:amd64 ... Removing libncursesw5:amd64 ... Removing libpixman-1-0:amd64 ... Removing libpng12-0:amd64 ... Removing libsqlite3-0:amd64 ... Removing python-minimal ... Removing python2.7-minimal ... Removing libssl1.0.0:amd64 ... Removing libxrender1:amd64 ... Removing libx11-6:amd64 ... Removing libx11-data ... Removing libxcb-shm0:amd64 ... Removing libxcb-render0:amd64 ... Removing libxcb1:amd64 ... Removing libxau6:amd64 ... Removing libxdmcp6:amd64 ... Removing libxml2:amd64 ... Removing mime-support ... Removing ttf-dejavu-core ... 0m30.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', 'remove', 'libx11-data', 'libcairo2:amd64', 'libfreetype6:amd64', 'libx11-6:amd64', 'libfontconfig1:amd64', 'libpixman-1-0:amd64', 'libsqlite3-0:amd64', 'libopenbabel4', 'libssl1.0.0:amd64', 'libxcb1:amd64', 'python', 'libxdmcp6:amd64', 'libexpat1:amd64', 'python2.7', 'libxau6:amd64', 'libxcb-shm0:amd64', 'libpng12-0:amd64', 'libxrender1:amd64', 'mime-support', 'libxml2:amd64', 'python-minimal', 'ttf-dejavu-core', 'libncursesw5:amd64', 'fontconfig-config', 'python2.7-minimal', 'libxcb-render0:amd64', 'python-openbabel'] 0m30.2s INFO: Running scripts post_remove 0m30.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_remove_exceptions'] 0m30.2s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_remove_exceptions'] 0m30.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg', '--purge', 'libx11-data', 'libcairo2:amd64', 'libfreetype6:amd64', 'libx11-6:amd64', 'libfontconfig1:amd64', 'libpixman-1-0:amd64', 'libsqlite3-0:amd64', 'libopenbabel4', 'libssl1.0.0:amd64', 'libxcb1:amd64', 'python', 'libxdmcp6:amd64', 'libexpat1:amd64', 'python2.7', 'libxau6:amd64', 'libxcb-shm0:amd64', 'libpng12-0:amd64', 'libxrender1:amd64', 'mime-support', 'libxml2:amd64', 'python-minimal', 'ttf-dejavu-core', 'libncursesw5:amd64', 'fontconfig-config', 'python2.7-minimal', 'libxcb-render0:amd64'] 0m30.7s DUMP: dpkg: warning: ignoring request to remove libx11-data which isn't installed (Reading database ... 6820 files and directories currently installed.) Removing libcairo2:amd64 ... Purging configuration files for libcairo2:amd64 ... Removing libfreetype6:amd64 ... Purging configuration files for libfreetype6:amd64 ... Removing libx11-6:amd64 ... Purging configuration files for libx11-6:amd64 ... Removing libfontconfig1:amd64 ... Purging configuration files for libfontconfig1:amd64 ... Removing libpixman-1-0:amd64 ... Purging configuration files for libpixman-1-0:amd64 ... Removing libsqlite3-0:amd64 ... Purging configuration files for libsqlite3-0:amd64 ... Removing libopenbabel4 ... Purging configuration files for libopenbabel4 ... Removing libssl1.0.0:amd64 ... Purging configuration files for libssl1.0.0:amd64 ... Removing libxcb1:amd64 ... Purging configuration files for libxcb1:amd64 ... Removing python ... Purging configuration files for python ... Removing libxdmcp6:amd64 ... Purging configuration files for libxdmcp6:amd64 ... Removing libexpat1:amd64 ... Purging configuration files for libexpat1:amd64 ... Removing python2.7 ... Purging configuration files for python2.7 ... Removing libxau6:amd64 ... Purging configuration files for libxau6:amd64 ... Removing libxcb-shm0:amd64 ... Purging configuration files for libxcb-shm0:amd64 ... Removing libpng12-0:amd64 ... Purging configuration files for libpng12-0:amd64 ... Removing libxrender1:amd64 ... Purging configuration files for libxrender1:amd64 ... Removing mime-support ... Purging configuration files for mime-support ... Removing libxml2:amd64 ... Purging configuration files for libxml2:amd64 ... dpkg: warning: ignoring request to remove python-minimal which isn't installed dpkg: warning: ignoring request to remove ttf-dejavu-core which isn't installed Removing libncursesw5:amd64 ... Purging configuration files for libncursesw5:amd64 ... Removing fontconfig-config ... Purging configuration files for fontconfig-config ... Removing python2.7-minimal ... Purging configuration files for python2.7-minimal ... Removing libxcb-render0:amd64 ... Purging configuration files for libxcb-render0:amd64 ... 0m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg', '--purge', 'libx11-data', 'libcairo2:amd64', 'libfreetype6:amd64', 'libx11-6:amd64', 'libfontconfig1:amd64', 'libpixman-1-0:amd64', 'libsqlite3-0:amd64', 'libopenbabel4', 'libssl1.0.0:amd64', 'libxcb1:amd64', 'python', 'libxdmcp6:amd64', 'libexpat1:amd64', 'python2.7', 'libxau6:amd64', 'libxcb-shm0:amd64', 'libpng12-0:amd64', 'libxrender1:amd64', 'mime-support', 'libxml2:amd64', 'python-minimal', 'ttf-dejavu-core', 'libncursesw5:amd64', 'fontconfig-config', 'python2.7-minimal', 'libxcb-render0:amd64'] 0m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg', '--purge', 'python-openbabel'] 0m30.7s DUMP: dpkg: warning: ignoring request to remove python-openbabel which isn't installed 0m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg', '--purge', 'python-openbabel'] 0m30.7s INFO: Running scripts post_purge 0m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_purge_exceptions'] 0m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_purge_exceptions'] 0m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg', '--purge', '--pending'] 0m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg', '--purge', '--pending'] 0m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg', '--remove', '--pending'] 0m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg', '--remove', '--pending'] 0m30.7s INFO: Running scripts post_test 0m30.7s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_test_exceptions'] 0m30.7s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'tmp/scripts/post_test_exceptions'] 0m30.7s DEBUG: Starting command: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m31.2s DEBUG: Command failed (status=1), but ignoring error: ['lsof', '-w', '+D', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m31.2s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg-divert', '--list'] 0m31.3s DUMP: diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash local diversion of /bin/sync to /bin/sync.distrib local diversion of /home to /home.distrib diversion of /bin/sh to /bin/sh.distrib by dash 0m31.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'dpkg-divert', '--list'] 0m31.3s DEBUG: Starting command: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', 'clean'] 0m31.3s DEBUG: Command ok: ['chroot', '/srv/piuparts.debian.org/tmp/tmpysOdRB', 'apt-get', 'clean'] 0m31.3s DEBUG: Recording chroot state 0m32.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/run/shm'] 0m32.7s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/run/shm'] 0m32.7s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/console'] 0m32.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/console'] 0m32.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/ptmx'] 0m32.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/ptmx'] 0m32.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/pts'] 0m32.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/dev/pts'] 0m32.8s DEBUG: Starting command: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/proc'] 0m32.8s DEBUG: Command ok: ['umount', '/srv/piuparts.debian.org/tmp/tmpysOdRB/proc'] 0m32.8s DEBUG: Starting command: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m32.9s DEBUG: Command ok: ['rm', '-rf', '--one-file-system', '/srv/piuparts.debian.org/tmp/tmpysOdRB'] 0m32.9s DEBUG: Removed directory tree at /srv/piuparts.debian.org/tmp/tmpysOdRB 0m33.0s INFO: PASS: Upgrading between Debian distributions. 0m33.0s INFO: PASS: All tests. 0m33.0s INFO: piuparts run ends. ret=0 End: 2018-10-03 14:03:53 UTC